Clone Name | rbasd18e12 |
---|---|
Clone Library Name | barley_pub |
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 1302 bits (657), Expect = 0.0 Identities = 664/665 (99%), Gaps = 1/665 (0%) Strand = Plus / Minus Query: 1 cgtagtattagcataatt-accccaaaatacaacgacaatatctgtaggtaaagctgcgg 59 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1738 cgtagtattagcataattcaccccaaaatacaacgacaatatctgtaggtaaagctgcgg 1679 Query: 60 gtccgccatggctgagcagctacacaattaacaacacacgtcgatcaacaccaacgcacg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1678 gtccgccatggctgagcagctacacaattaacaacacacgtcgatcaacaccaacgcacg 1619 Query: 120 aacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgcacgaacggattaagcg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1618 aacaagtaaaggcaaaagcgacaggaactgaagtaagaacatgcacgaacggattaagcg 1559 Query: 180 tcttatttttggatgtactttggaagcctcctcctctcctccacggtggcacggacgatc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1558 tcttatttttggatgtactttggaagcctcctcctctcctccacggtggcacggacgatc 1499 Query: 240 cttcagacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatgggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1498 cttcagacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatgggg 1439 Query: 300 tcgatgagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggac 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1438 tcgatgagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggac 1379 Query: 360 agcagcttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1378 agcagcttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagc 1319 Query: 420 gggaacgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggcc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1318 gggaacgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggcc 1259 Query: 480 acgcgggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1258 acgcgggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttg 1199 Query: 540 atcttggagaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtgg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1198 atcttggagaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtgg 1139 Query: 600 tccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcg 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 tccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcg 1079 Query: 660 gcgta 664 ||||| Sbjct: 1078 gcgta 1074
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 458 bits (231), Expect = e-125 Identities = 372/418 (88%), Gaps = 7/418 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 2045 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2044 cttgccctggctgatgccgatgaacaccttgttgcactcctcgccgggggacttgagctt 1985 Query: 368 ctcgccggtgaggtacacgcagccgagct-cctcgcggacgaagcggtacagcgggaacg 426 ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 1984 ctcgccggtgaggtacacgcagccgagctccctcgcggacgaagcggtacacggggaacg 1925 Query: 427 acctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcggg 486 ||| ||||||||||||| |||||| ||| ||||| ||||||||||| | ||||||||||| Sbjct: 1924 accggctctccttgatccggttggcgatcggcgcggtgccgttctccacggccacgcggg 1865 Query: 487 cggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgg 546 |||||||||||||||| ||||| ||||| |||||||||||| |||||||| ||||||||| Sbjct: 1864 cggcctcgatctcccggggcagagccgagcgcagctcctccccgaacttggtgatcttgg 1805 Query: 547 agaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacga 606 ||||||| | || ||| | |||||| || |||| ||| |||| ||| || |||| Sbjct: 1804 agaacacggagggctcccgctcggcgtc------gccgctggtgagggagtgatcgacga 1751 Query: 607 gcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1750 gcacggcgcggagcttctgcatcagcgggtagttggcgctgcacgggtcgtcggcgta 1693
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2189 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2130 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2129 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2070 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2069 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2010 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 2009 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 1950 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 1949 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 1890 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 1889 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 1836 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 1835 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 1782
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24992256 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 24992315 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 24992316 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 24992375 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24992376 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 24992435 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 24992436 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 24992495 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 24992496 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 24992555 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 24992556 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 24992609 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 24992610 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 24992663 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 25004085 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 25004144 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 25004145 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 25004204 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 25004205 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 25004264 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 25004265 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 25004323 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 25025228 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 25025284 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 25011629 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 25011688 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 25011689 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 25011748 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 418 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 25011749 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 25011796 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 25004435 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 25004494 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 618 agcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||||| |||||| ||||||||||||||||| | |||||||||||| Sbjct: 25011996 agcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcgta 25012042 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||| | |||||||||||| ||||||||||| |||||| ||||||||| |||||| Sbjct: 25025564 agggcgcgctccacgagcacgttgcgcagcttcttcatcagcgggtagttgtggctgcac 25025623 Query: 651 gcgtcgtcggcgta 664 | |||||| ||||| Sbjct: 25025624 gggtcgtccgcgta 25025637 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 390 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 449 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 25025363 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 25025422 Query: 450 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 509 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 25025423 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 25025482 Query: 510 gccgaccgcagctcctcctcgaact 534 | || ||||||||||||||||||| Sbjct: 25025483 gtcgcgcgcagctcctcctcgaact 25025507
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5244 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 5303 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 5304 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 5363 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5364 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 5423 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 5424 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 5483 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 5484 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 5543 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 5544 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 5597 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 5598 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 5651 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 17073 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 17132 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 17133 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 17192 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 17193 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 17252 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 17253 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 17311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 38216 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 38272 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 24617 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 24676 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 24677 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 24736 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 418 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 24737 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 24784 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 17423 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 17482 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 618 agcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||||| |||||| ||||||||||||||||| | |||||||||||| Sbjct: 24984 agcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcgta 25030 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||| | |||||||||||| ||||||||||| |||||| ||||||||| |||||| Sbjct: 38552 agggcgcgctccacgagcacgttgcgcagcttcttcatcagcgggtagttgtggctgcac 38611 Query: 651 gcgtcgtcggcgta 664 | |||||| ||||| Sbjct: 38612 gggtcgtccgcgta 38625 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 390 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 449 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 38351 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 38410 Query: 450 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 509 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 38411 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 38470 Query: 510 gccgaccgcagctcctcctcgaact 534 | || ||||||||||||||||||| Sbjct: 38471 gtcgcgcgcagctcctcctcgaact 38495
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 153539 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 153598 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 153599 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 153658 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 153659 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 153718 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 153719 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 153778 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 153779 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 153838 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 153839 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 153892 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 153893 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 153946 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 165368 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 165427 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 165428 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 165487 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 165488 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 165547 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 165548 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 165606 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 165718 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 165777
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2191 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2132 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2131 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2072 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2071 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2012 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 2011 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 1952 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 1951 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 1892 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 1891 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 1838 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 1837 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 1784
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 402 bits (203), Expect = e-109 Identities = 361/414 (87%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 983 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 924 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 923 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 864 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 863 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 804 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 803 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 744 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 743 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 684 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 683 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 630 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 629 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 576
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 394 bits (199), Expect = e-106 Identities = 360/414 (86%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1218 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 1159 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||| ||||||||||| ||||| Sbjct: 1158 cttgccctggctgatgccgaggaacaccttgttgcactccccgccgggggacttgagctt 1099 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1098 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 1039 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 1038 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 979 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 978 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 919 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||||| || |||| ||| |||||||| || ||||| Sbjct: 918 gaacacggaggcctcgggctcggcgtc------gccgctggtgagggcgtgctcgacgag 865 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 864 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 811
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 377 bits (190), Expect = e-101 Identities = 359/414 (86%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4066 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 4007 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 4006 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 3947 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3946 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 3887 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || |||||| |||| |||||| || ||| || ||| |||| ||| ||| |||||||| Sbjct: 3886 ccggctctcgacgatccggttggcgacgggggcggtg-cgttggcgacggcgacgcgggc 3828 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 3827 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 3768 Query: 548 gaacaccgtggcctcgctctcggcctcgccggggccggcggtcagggcgtggtccacgag 607 |||||| | ||||||| |||| || | |||| ||| |||||||| || ||||| Sbjct: 3767 gaacacggaggcctcgggctcg-----gcggtcgccgctggtgagggcgtgctcgacgag 3713 Query: 608 cacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggc 661 ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 3712 cacggcgcggagcttctgcatgagcgggtagttggcgctgcacgggtcgtcggc 3659
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2118 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2059 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2058 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1999 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1998 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1939 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 1938 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1879 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1878 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1819 Query: 551 cac 553 ||| Sbjct: 1818 cac 1816 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 1778 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 1719 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 1718 gggtcgtcggcgta 1705
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2010 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 1951 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1950 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1891 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1831 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 1830 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1771 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1770 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1711 Query: 551 cac 553 ||| Sbjct: 1710 cac 1708 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 1670 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 1611 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 1610 gggtcgtcggcgta 1597
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 98032 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 98091 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 98092 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 98151 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98152 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 98211 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 98212 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 98271 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 98272 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 98331 Query: 551 cac 553 ||| Sbjct: 98332 cac 98334 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 118218 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 118277 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 118278 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 118337 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 118338 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 118397 Query: 431 gc 432 || Sbjct: 118398 gc 118399 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||| Sbjct: 118576 acggcgcgcatcttctgcatcagcgggtagttggcgctgcaggggtcgtccgcgta 118631 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 98372 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 98431 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 98432 gggtcgtcggcgta 98445
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 25880622 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 25880681 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 25880682 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 25880741 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25880742 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 25880801 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 25880802 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 25880861 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 25880862 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 25880921 Query: 551 cac 553 ||| Sbjct: 25880922 cac 25880924 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 25900808 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 25900867 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 25900868 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 25900927 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 25900928 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 25900987 Query: 431 gc 432 || Sbjct: 25900988 gc 25900989 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||| Sbjct: 25901166 acggcgcgcatcttctgcatcagcgggtagttggcgctgcaggggtcgtccgcgta 25901221 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 25880962 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 25881021 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 25881022 gggtcgtcggcgta 25881035
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2210 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2151 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2150 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 2091 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 2031 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 2030 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1971 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1970 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1911 Query: 551 cac 553 ||| Sbjct: 1910 cac 1908 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 1870 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 1811 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 1810 gggtcgtcggcgta 1797
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 339 bits (171), Expect = 7e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6884 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 6943 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 6944 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 7003 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7004 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 7063 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 7064 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 7123 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 7124 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 7183 Query: 551 cac 553 ||| Sbjct: 7184 cac 7186 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 27070 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 27129 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 27130 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 27189 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27190 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 27249 Query: 431 gc 432 || Sbjct: 27250 gc 27251 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||| Sbjct: 27428 acggcgcgcatcttctgcatcagcgggtagttggcgctgcaggggtcgtccgcgta 27483 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||| || |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct: 7224 agggcgtgctcgacgagcacggcgcggatcttggtcatcagcgggtagttggcgctgcac 7283 Query: 651 gcgtcgtcggcgta 664 | |||||||||||| Sbjct: 7284 gggtcgtcggcgta 7297
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 299 bits (151), Expect = 6e-78 Identities = 265/303 (87%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1968 gatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcgatgagctt 1909 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | || ||||| | | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1908 gccctcgctgagggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1849 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 |||||| ||||||||| |||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 1848 gccggtcaggtacacggcgccgaggtcctggcggatgaagcggtacagcgggtacgaccg 1789 Query: 431 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 490 ||||||||||||| ||||| ||| ||||| | |||| |||||||||||||||||||||| Sbjct: 1788 gctctccttgatcctgttggcgatcggcgcggcgccggtctcgaaggccacgcgggcggc 1729 Query: 491 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 550 ||| ||||||| ||||| ||| |||||||||||||||||| |||||||||||||||| Sbjct: 1728 ctccatctccctgggcagcgcctcgcgcagctcctcctcgaacctgttgatcttggagaa 1669 Query: 551 cac 553 ||| Sbjct: 1668 cac 1666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||||||||||| |||||||| || | ||||| |||||| || ||||||||||||| Sbjct: 1628 agggcgtggtccaccagcacggcccggatcttcttcatcaggggcgagttggcgctgcag 1569 Query: 651 gcgtcgtcg 659 | ||||||| Sbjct: 1568 gggtcgtcg 1560
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 248 bits (125), Expect = 2e-62 Identities = 263/309 (85%) Strand = Plus / Minus Query: 245 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 304 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 2215 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 2156 Query: 305 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 364 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 2155 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 2096 Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2095 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2036 Query: 425 cgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcg 484 ||||| ||| ||| |||| |||| | | ||| || ||||| | ||| |||||||| Sbjct: 2035 cgaccggctgtccgcgatccggttcgccacgggggcggtgccctcggcgaccgccacgcg 1976 Query: 485 ggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatctt 544 ||||||||| | |||| | ||||| ||| || ||||||||||||||| || ||||||| Sbjct: 1975 ggcggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatctt 1916 Query: 545 ggagaacac 553 ||||||||| Sbjct: 1915 ggagaacac 1907 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcag 631 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1875 agggcgtggtccaccagcacggcgcgcagcttctgcatcag 1835
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 234 bits (118), Expect = 3e-58 Identities = 260/306 (84%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 248 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 307 |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2216 gttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacgag 2157 Query: 308 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 367 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||| | Sbjct: 2156 cttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagcct 2097 Query: 368 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2096 ctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaacga 2037 Query: 428 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 487 || ||| ||| |||| |||| | | ||| || ||||| | || | ||||||||||| Sbjct: 2036 ccggctgtccgcgatccggttcgccacgggggcggtgccctcggcg-acgccacgcgggc 1978 Query: 488 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 547 |||||| | |||| | ||||| ||| || ||||||||||||||| || |||||||||| Sbjct: 1977 ggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatcttgga 1918 Query: 548 gaacac 553 |||||| Sbjct: 1917 gaacac 1912 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcag 631 |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1879 agggcgtggtccaccagcacggcgcgcagcttctgcatcag 1839
>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds Length = 190 Score = 216 bits (109), Expect = 7e-53 Identities = 163/181 (90%) Strand = Plus / Minus Query: 245 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 304 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 181 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 122 Query: 305 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 364 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 121 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 62 Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2 Query: 425 c 425 | Sbjct: 1 c 1
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 2117 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 2116 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 2058 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1946 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 1887
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 2117 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 2116 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 2058 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1946 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 1887
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1537 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1478 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1477 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1418 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 1417 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 1358 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 1357 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 1299 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 1187 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 1128
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1253 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1194 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1193 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1134 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 1133 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 1074 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 1073 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 1015 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 605 gagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 903 gagcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 844
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 113 bits (57), Expect = 8e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 2141 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 2082 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 2081 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 2022 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 2021 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 1969 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 603 acgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcg 662 ||||||||| ||| ||||||| |||||| ||||||||||||||||| | |||||||||| Sbjct: 1793 acgagcacgctgcggagcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcg 1734 Query: 663 ta 664 || Sbjct: 1733 ta 1732
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 113 bits (57), Expect = 8e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 122631 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 122690 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 122691 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 122750 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 122751 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 122803 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 603 acgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcg 662 ||||||||| ||| ||||||| |||||| ||||||||||||||||| | |||||||||| Sbjct: 122979 acgagcacgctgcggagcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcg 123038 Query: 663 ta 664 || Sbjct: 123039 ta 123040
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 113 bits (57), Expect = 8e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 65212 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 65271 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 65272 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 65331 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 65332 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 65384 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 603 acgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcg 662 ||||||||| ||| ||||||| |||||| ||||||||||||||||| | |||||||||| Sbjct: 65560 acgagcacgctgcggagcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcg 65619 Query: 663 ta 664 || Sbjct: 65620 ta 65621
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 8e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 20809407 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 20809466 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 20809467 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 20809526 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 427 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 20809527 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 20809579 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 603 acgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcg 662 ||||||||| ||| ||||||| |||||| ||||||||||||||||| | |||||||||| Sbjct: 20809755 acgagcacgctgcggagcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcg 20809814 Query: 663 ta 664 || Sbjct: 20809815 ta 20809816 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 7843191 aaaatacaacgacaatatct 7843172
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 109 bits (55), Expect = 1e-20 Identities = 194/239 (81%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 4725 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 4666 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 4665 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 4606 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 4605 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 4546 Query: 435 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 493 ||||||||| |||| |||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 4545 tccttgatccggtt-gggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 4488 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 606 agcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||| ||||| ||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 4374 agcaccgcgcggagcttctgcatcaacgggtagttggcgctgcaggggtcgtcggcgta 4316
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2139 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2080 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2079 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2020 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2019 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 1960 Query: 431 gc 432 || Sbjct: 1959 gc 1958 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||| Sbjct: 1781 acggcgcgcatcttctgcatcagcgggtagttggcgctgcaggggtcgtccgcgta 1726
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 107 bits (54), Expect = 5e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2264 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2205 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2204 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2145 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 430 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2144 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 2085 Query: 431 gc 432 || Sbjct: 2084 gc 2083 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||| Sbjct: 1906 acggcgcgcatcttctgcatcagcgggtagttggcgctgcaggggtcgtccgcgta 1851
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 103 bits (52), Expect = 7e-19 Identities = 139/168 (82%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1057 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1056 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 997 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcggg 422 || |||||| || ||||| ||||||||| ||||| |||||||||||| Sbjct: 996 gtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcggg 949 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 606 agcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||| ||||| |||||||||||||| |||||||||| |||||| | |||||| ||||| Sbjct: 765 agcaccgcgcggagcttctgcatcagcgggtagttggggctgcacgggtcgtccgcgta 707
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 314 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1503 Query: 315 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 374 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1502 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 1443 Query: 375 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 434 || |||||| || ||||| |||||||| ||||| |||||||||||| | |||| || | Sbjct: 1442 gtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcgggtaggaccggcac 1383 Query: 435 tccttgatcaggttgggga 453 ||| ||||| |||||||| Sbjct: 1382 tccctgatcctgttgggga 1364 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 606 agcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||| ||||| |||||||||||||| | |||||||| |||||| | |||||| ||||| Sbjct: 1211 agcaccgcgcggagcttctgcatcagcgcgtagttggggctgcacgggtcgtccgcgta 1153
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2167 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2111 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||| | |||||||||||| ||||||||||| |||||| ||||||||| |||||| Sbjct: 1831 agggcgcgctccacgagcacgttgcgcagcttcttcatcagcgggtagttgtggctgcac 1772 Query: 651 gcgtcgtcggcgta 664 | |||||| ||||| Sbjct: 1771 gggtcgtccgcgta 1758 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 390 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 449 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 2032 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 1973 Query: 450 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 509 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1972 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 1913 Query: 510 gccgaccgcagctcctcctcgaact 534 | || ||||||||||||||||||| Sbjct: 1912 gtcgcgcgcagctcctcctcgaact 1888
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 4566 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 4510 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||| | |||||||||||| ||||||||||| |||||| ||||||||| |||||| Sbjct: 4236 agggcgcgctccacgagcacgttgcgcagcttcttcatcagcgggtagttgtggctgcac 4177 Query: 651 gcgtcgtcggcgta 664 | ||||||| |||| Sbjct: 4176 gggtcgtcgccgta 4163 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 390 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 449 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 4431 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 4372 Query: 450 gggatgggcgccgtgccgttctc 472 || || | ||||||||||||||| Sbjct: 4371 ggaatcgccgccgtgccgttctc 4349
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2166 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2110 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 591 agggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcat 650 |||||| | |||||||||||| ||||||||||| |||||| ||||||||| |||||| Sbjct: 1830 agggcgcgctccacgagcacgttgcgcagcttcttcatcagcgggtagttgtggctgcac 1771 Query: 651 gcgtcgtcggcgta 664 | |||||| ||||| Sbjct: 1770 gggtcgtccgcgta 1757 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 390 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 449 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 2031 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 1972 Query: 450 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 509 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1971 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 1912 Query: 510 gccgaccgcagctcctcctcgaact 534 | || ||||||||||||||||||| Sbjct: 1911 gtcgcgcgcagctcctcctcgaact 1887
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 87.7 bits (44), Expect = 4e-14 Identities = 137/168 (81%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| |||| Sbjct: 2133 gatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgctt 2074 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | |||| ||||| |||||| |||||| | |||||||| || ||| | |||||| Sbjct: 2073 gccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgtcttctc 2014 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 418 ||||||||||||| | |||||||||||||| || || |||||||| Sbjct: 2013 gccggtgaggtactccgtcccgagctcctcgcgtacaaaccggtacag 1966 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 600 tccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcg 659 ||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 1784 tccacgagcacactgcgcagcttcttcatcagtgggtagttggggctgcatgggtcgtcg 1725 Query: 660 gcgta 664 ||||| Sbjct: 1724 gcgta 1720
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16320140 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16320199 Query: 311 g 311 | Sbjct: 16320200 g 16320200 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgca 649 |||||||||| |||||||||||| |||||| |||||||||| Sbjct: 16319840 acggcgcgcatcttctgcatcagcgggtagctggcgctgca 16319800 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 614 gcgcagcttctgcatcagtgggtagttggcgctgca 649 ||||| |||||||||||| ||||||||||||||||| Sbjct: 16320506 gcgcatcttctgcatcagcgggtagttggcgctgca 16320541 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20335822 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20335763 Query: 425 cga 427 ||| Sbjct: 20335762 cga 20335760
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttg 1569 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 594 gcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgcatgcg 653 ||||| ||||| ||||| || ||||||||||||||||| |||||||||| |||||| | | Sbjct: 1286 gcgtgctccaccagcaccgcccgcagcttctgcatcagcgggtagttggggctgcacggg 1227 Query: 654 tcgtcggcgta 664 ||||| ||||| Sbjct: 1226 tcgtccgcgta 1216
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16273373 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16273432 Query: 311 g 311 | Sbjct: 16273433 g 16273433 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgca 649 |||||||||| |||||||||||| |||||| |||||||||| Sbjct: 16273073 acggcgcgcatcttctgcatcagcgggtagctggcgctgca 16273033 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 614 gcgcagcttctgcatcagtgggtagttggcgctgca 649 ||||| |||||||||||| ||||||||||||||||| Sbjct: 16273739 gcgcatcttctgcatcagcgggtagttggcgctgca 16273774 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20262036 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20261977 Query: 425 cga 427 ||| Sbjct: 20261976 cga 20261974
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 67191 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 67250 Query: 311 g 311 | Sbjct: 67251 g 67251 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 609 acggcgcgcagcttctgcatcagtgggtagttggcgctgca 649 |||||||||| |||||||||||| |||||| |||||||||| Sbjct: 66891 acggcgcgcatcttctgcatcagcgggtagctggcgctgca 66851 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 614 gcgcagcttctgcatcagtgggtagttggcgctgca 649 ||||| |||||||||||| ||||||||||||||||| Sbjct: 67557 gcgcatcttctgcatcagcgggtagttggcgctgca 67592
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Minus Query: 251 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 310 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 2136 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 2077 Query: 311 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 370 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 2076 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 2017 Query: 371 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 418 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 2016 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 1969 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 618 agcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||||| |||||| ||||||||||||||||| | |||||||||||| Sbjct: 1769 agcttcttcatcagcgggtagttggcgctgcacgggtcgtcggcgta 1723
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 ||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||| Sbjct: 3097 ggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttg 3041 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 593 ggcgtggtccacgagcacggcgcgcagcttctgcatcagtgggtagttggcgctgca 649 |||||| |||||||| || || |||| ||||||||| || ||||||||||||||||| Sbjct: 2759 ggcgtgctccacgagaactgcacgcatcttctgcatgagggggtagttggcgctgca 2703
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagca 294 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1011 ggcaggggctcgccgttccactccttgaggcactcaagca 972 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 615 cgcagcttctgcatcagtgggtagttggcgct 646 |||| ||||||||| ||||||||||||||||| Sbjct: 651 cgcatcttctgcatgagtgggtagttggcgct 620
>emb|X78269.1|NTPHEAL N.tabacum (Samsun NN) mRNA for phenylalanine ammonia-lyase Length = 2462 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 621 ttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1884 ttctgcatcagtgggtagttggcgctgcaggcgtcatcagcgta 1841
>gb|AF411134.1| Lactuca sativa phenylalanine ammonia-lyase2 mRNA, complete cds Length = 2380 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 618 agcttctgcatcagtgggtagttggcgctgcatgcgtcgtcg 659 ||||||||||||| ||||||| |||||||||| ||||||||| Sbjct: 1854 agcttctgcatcaatgggtaggtggcgctgcaagcgtcgtcg 1813
>dbj|D17467.1|TOBPAL1 Nicotiana tabacum mRNA for phenylalanine ammonia-lyase, complete cds Length = 2527 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 621 ttctgcatcagtgggtagttggcgctgcatgcgtcgtc 658 |||||||||||||||||||| |||||||| |||||||| Sbjct: 1967 ttctgcatcagtgggtagttagcgctgcaggcgtcgtc 1930
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 258 aggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 |||||||||||||||||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttg 323
>dbj|AB008199.1| Nicotiana tabacum palA gene for phenylalanine ammonia-lyase, complete cds Length = 5603 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 621 ttctgcatcagtgggtagttggcgctgcatgcgtcgtc 658 |||||||||||||||||||| |||||||| |||||||| Sbjct: 4851 ttctgcatcagtgggtagttagcgctgcaggcgtcgtc 4814
>gb|AF167487.1|AF167487 Eucalyptus globulus phenylalanine ammonia lyase (PAL) gene, partial cds Length = 1193 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 617 cagcttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 ||||||||||||||| |||||| |||||||||| ||||| || ||||| Sbjct: 831 cagcttctgcatcagcgggtaggtggcgctgcaggcgtcatcagcgta 784
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 110514 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 110455 Query: 425 cga 427 ||| Sbjct: 110454 cga 110452
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28380582 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28380523 Query: 425 cga 427 ||| Sbjct: 28380522 cga 28380520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28363031 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28362972 Query: 425 cga 427 ||| Sbjct: 28362971 cga 28362969
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 175879 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 175938 Query: 425 cga 427 ||| Sbjct: 175939 cga 175941
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 311 ||||| |||||||| ||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttg 990
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 621 ttctgcatcagtgggtagttggcgctgcatgcgtcgtcggcgta 664 |||||||| |||||||||||| ||||||| | |||||| ||||| Sbjct: 1054 ttctgcatgagtgggtagttgacgctgcaagggtcgtctgcgta 1011 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 255 ggcaggggctcgccgttccactccttgaggcactc 289 ||||||||||| || ||||||||||| |||||||| Sbjct: 1420 ggcaggggctcaccattccactccttcaggcactc 1386
>ref|XM_310523.2| Anopheles gambiae str. PEST ENSANGP00000017298 (ENSANGG00000014809), partial mRNA Length = 1971 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 511 ccgaccgcagctcctcctcgaacttgtt 538 |||||||||||| ||||||||||||||| Sbjct: 367 ccgaccgcagcttctcctcgaacttgtt 340
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 ctcgctctcggcctcgccggg 580 ||||||||||||||||||||| Sbjct: 1787845 ctcgctctcggcctcgccggg 1787825
>ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LOC677558 (LOC677558), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 951 atttttggatgtactttggaa 971
>ref|XR_004983.1| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC676880), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 1582 atttttggatgtactttggaa 1602
>ref|XM_112266.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC195555), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>ref|XM_205435.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC279185), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 ggcctcgccggggccggcggt 589 ||||||||||||||||||||| Sbjct: 76802 ggcctcgccggggccggcggt 76822
>ref|XM_746694.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g10390) partial mRNA Length = 2004 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tcctcctcgaacttgttgatc 542 ||||||||||||||||||||| Sbjct: 1031 tcctcctcgaacttgttgatc 1011
>ref|XM_647174.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (125.t00007) partial mRNA Length = 1203 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 acttgttgatcttggagaaca 552 ||||||||||||||||||||| Sbjct: 123 acttgttgatcttggagaaca 143
>emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chromosome 11 Contains part of the gene for a novel protein (C230094A16Rik), the gene for a novel protein (4931440F15Rik) similar to Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), a ribosomal protein L23 (Rpl23) pseudogene, a preferentially expressed antigen in melanoma like 5 (Pramel5) pseudogene and a CpG island, complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 174370 atttttggatgtactttggaa 174390
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acagcgggaacgacctgctct 435 ||||||||||||||||||||| Sbjct: 1761401 acagcgggaacgacctgctct 1761381
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 ttccactccttgaggcactcgagcatggg 298 ||||||||||||||||| || |||||||| Sbjct: 2185 ttccactccttgaggcattcaagcatggg 2157
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggaagcctcctcctctcctcc 221 ||||||||||||||||||||| Sbjct: 7993897 ggaagcctcctcctctcctcc 7993917
>gb|AF325496.1|AF325496 Ipomoea nil phenylalanine ammonia-lyase gene, complete cds Length = 5172 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 621 ttctgcatcagtgggtagttggcgctgca 649 |||||||||||||||||||| || ||||| Sbjct: 3782 ttctgcatcagtgggtagttagcactgca 3754
>gb|M83314.1|TOMPHEAMLY Lycopersicon esculentum phenylalanine ammonia lyase (pal) gene, complete cds. and promoter region Length = 3939 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 617 cagcttctgcatcagtgggtagttggcgctgca 649 |||||||||||||| |||||||||| |||||| Sbjct: 3348 cagcttctgcatcaaagggtagttggagctgca 3316
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 tcggcctcgccggggccggcg 587 ||||||||||||||||||||| Sbjct: 1967615 tcggcctcgccggggccggcg 1967635
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggaagcctcctcctctcctcc 221 ||||||||||||||||||||| Sbjct: 106540 ggaagcctcctcctctcctcc 106560
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggaagcctcctcctctcctcc 221 ||||||||||||||||||||| Sbjct: 9002 ggaagcctcctcctctcctcc 9022
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 actttggaagcctcctcctct 216 ||||||||||||||||||||| Sbjct: 44602 actttggaagcctcctcctct 44582
>gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, partial cds Length = 1110 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 ttccactccttgaggcactcgagcatggg 298 ||||||||||| | ||||||||||||||| Sbjct: 864 ttccactccttcaagcactcgagcatggg 836 Score = 42.1 bits (21), Expect = 2.3 Identities = 93/117 (79%) Strand = Plus / Minus Query: 365 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 424 |||||| ||||| |||||| || ||||||||||| | ||||| | ||||||||| | Sbjct: 769 cttctccccggttaggtacccggctccgagctcctccctaacgaacctgtacagcggata 710 Query: 425 cgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccac 481 ||||||| ||||| |||| ||| | ||| | || ||||||||||||||| ||||| Sbjct: 709 agacctgcactcctggatcctgttcgcgatcgccgacgtgccgttctcgaatgccac 653
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 gcctcgccggggccggcggtc 590 ||||||||||||||||||||| Sbjct: 19345 gcctcgccggggccggcggtc 19365
>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete sequence Length = 185594 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 42223 atttttggatgtactttggaa 42243
>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete sequence Length = 172962 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 147699 atttttggatgtactttggaa 147719 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 atttttggatgtactttggaa 204 ||||||||||||||||||||| Sbjct: 36754 atttttggatgtactttggaa 36774
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cgcgggcggcctcgatctcc 500 |||||||||||||||||||| Sbjct: 86711 cgcgggcggcctcgatctcc 86730
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 120777 aaaatacaacgacaatatct 120758
>ref|XM_423398.1| PREDICTED: Gallus gallus similar to cingulin (LOC425665), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 ccgcagctcctcctcgaact 534 |||||||||||||||||||| Sbjct: 1902 ccgcagctcctcctcgaact 1883
>ref|XM_363465.1| Magnaporthe grisea 70-15 hypothetical protein (MG01391.4) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 agccgagctcctcgcggacg 407 |||||||||||||||||||| Sbjct: 436 agccgagctcctcgcggacg 417
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 gcattcctcgccgggggacagcag 364 |||| ||||||||||||||||||| Sbjct: 1008707 gcatacctcgccgggggacagcag 1008730
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaatacaacgacaatatct 43 |||||||||||||||||||| Sbjct: 27966 aaaatacaacgacaatatct 27947
>ref|XM_541888.2| PREDICTED: Canis familiaris similar to DALR anticodon binding domain containing 3 isoform 1 (LOC484772), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 ccacgagcacggcgcgcagc 620 |||||||||||||||||||| Sbjct: 757 ccacgagcacggcgcgcagc 738
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 cggcgcgcagcttctgcatc 629 |||||||||||||||||||| Sbjct: 259813 cggcgcgcagcttctgcatc 259794
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tcgaaggccacgcgggcggc 490 |||||||||||||||||||| Sbjct: 2786407 tcgaaggccacgcgggcggc 2786426
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 472 cgaaggccacgcgggcggcctcgatctc 499 ||||||||| |||| ||||||||||||| Sbjct: 4080463 cgaaggccatgcggtcggcctcgatctc 4080490
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cgcgggcggcctcgatctcc 500 |||||||||||||||||||| Sbjct: 30973 cgcgggcggcctcgatctcc 30954
>gb|AY442270.1| Aeromonas hydrophila clone F11AH1 hypothetical protein, putative vgrG protein, and hypothetical protein genes, complete cds Length = 3992 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 cggggccggcggtcagggcg 596 |||||||||||||||||||| Sbjct: 1243 cggggccggcggtcagggcg 1224
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 595 cgtggtccacgagcacggcg 614 |||||||||||||||||||| Sbjct: 74271 cgtggtccacgagcacggcg 74252
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 taagcgtcttatttttggat 193 |||||||||||||||||||| Sbjct: 198253 taagcgtcttatttttggat 198234
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gatgccgaggaagaccttgg 339 |||||||||||||||||||| Sbjct: 1290667 gatgccgaggaagaccttgg 1290648
>gb|AC096566.2| Homo sapiens BAC clone RP11-292B1 from 4, complete sequence Length = 101931 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 aattaccccaaaatacaacgacaa 38 ||||||||||||||||||| |||| Sbjct: 63493 aattaccccaaaatacaacaacaa 63470
>ref|NM_174427.2| Bos taurus polymerase (DNA directed), delta 1, catalytic subunit 125kDa (POLD1), mRNA Length = 3451 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 cagggccgaccgcagctcctcctc 529 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 ccacgagcacggcgcgcagc 620 |||||||||||||||||||| Sbjct: 72231 ccacgagcacggcgcgcagc 72212
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gcagctcctcctcgaacttg 536 |||||||||||||||||||| Sbjct: 5055 gcagctcctcctcgaacttg 5036
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 ctcggcctcgccggggccgg 585 |||||||||||||||||||| Sbjct: 1166534 ctcggcctcgccggggccgg 1166515
>gb|AY850327.1| Magnaporthe grisea cytochrome P450-like protein mRNA, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 agccgagctcctcgcggacg 407 |||||||||||||||||||| Sbjct: 484 agccgagctcctcgcggacg 465
>dbj|AB240063.1| Streptomyces lavendulae subsp. lavendulae orfA, bpsA, bpsB, bpsC genes for Ribose-phosphate pyrophosphokinase, Blue-pigment synthetase, Putative pathway-specific transcriptional activator, S-adenosylmethionine synthetase, partial and complete cds Length = 5913 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tctcgaaggccacgcgggcg 488 |||||||||||||||||||| Sbjct: 4016 tctcgaaggccacgcgggcg 3997
>gb|M80395.1|BOVDPLDA Bovine DNA polymerase delta catalytic subunit mRNA, complete cds Length = 3451 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 cagggccgaccgcagctcctcctc 529 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,816,402 Number of Sequences: 3902068 Number of extensions: 4816402 Number of successful extensions: 109659 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107754 Number of HSP's gapped (non-prelim): 1888 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)