ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17p06 |
|---|---|
| Clone Library Name | barley_pub |
>HNRPF_MACFA (Q60HC3) Heterogeneous nuclear ribonucleoprotein F (hnRNP F)| Length = 414 Score = 72.8 bits (177), Expect = 5e-13 Identities = 34/78 (43%), Positives = 53/78 (67%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ T E+I++FF E+ + + + +GK TGEAFV+F + E+A+ A+ K Sbjct: 112 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 171 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ EE Sbjct: 172 KERIGHRYIEVFKSSQEE 189 Score = 64.7 bits (156), Expect = 1e-10 Identities = 38/78 (48%), Positives = 45/78 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KD+ Sbjct: 292 MRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRA 349 Query: 305 TIGTRYVELFPSTPEEAS 252 + RY+ELF ++ AS Sbjct: 350 NMQHRYIELFLNSTTGAS 367 Score = 62.8 bits (151), Expect = 5e-10 Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTED--NVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +KLRGLP+S ++ED+ F + + + VH Y +G+ +GEAFVE + + K A+ Sbjct: 12 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 71 Query: 317 KDKMTIGTRYVELFPS 270 KD+ ++G RY+E+F S Sbjct: 72 KDRESMGHRYIEVFKS 87
>HNRPF_HUMAN (P52597) Heterogeneous nuclear ribonucleoprotein F (hnRNP F)| (Nucleolin-like protein mcs94-1) Length = 414 Score = 72.8 bits (177), Expect = 5e-13 Identities = 34/78 (43%), Positives = 53/78 (67%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ T E+I++FF E+ + + + +GK TGEAFV+F + E+A+ A+ K Sbjct: 112 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKH 171 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ EE Sbjct: 172 KERIGHRYIEVFKSSQEE 189 Score = 64.7 bits (156), Expect = 1e-10 Identities = 38/78 (48%), Positives = 45/78 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KD+ Sbjct: 292 MRGLPYKATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRA 349 Query: 305 TIGTRYVELFPSTPEEAS 252 + RY+ELF ++ AS Sbjct: 350 NMQHRYIELFLNSTTGAS 367 Score = 62.8 bits (151), Expect = 5e-10 Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTED--NVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +KLRGLP+S ++ED+ F + + + VH Y +G+ +GEAFVE + + K A+ Sbjct: 12 VKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALK 71 Query: 317 KDKMTIGTRYVELFPS 270 KD+ ++G RY+E+F S Sbjct: 72 KDRESMGHRYIEVFKS 87
>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 71.2 bits (173), Expect = 1e-12 Identities = 31/73 (42%), Positives = 49/73 (67%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 L+GLP+ A + +I FF + ++ ED+++IAY +GKATGE FVEF K A+C+ K Sbjct: 434 LKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQ 493 Query: 305 TIGTRYVELFPST 267 +G R++++ P T Sbjct: 494 YMGNRFIQVHPIT 506 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 +K++ +P++ +I++I+ FF Y++ +V + Y G TGEA V F + + A A+ Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917 Query: 314 DKMTIGTRYVEL 279 + IG+R V+L Sbjct: 918 NDRPIGSRKVKL 929 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/78 (29%), Positives = 42/78 (53%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 + + G+P+SA D+ FF + L D VH+ G+ G V+F + + A+ ++ Sbjct: 306 VSVHGMPFSAMENDVRDFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363 Query: 311 KMTIGTRYVELFPSTPEE 258 +M + RYVE+ P+T + Sbjct: 364 RMLMIQRYVEVSPATERQ 381 Score = 39.3 bits (90), Expect = 0.006 Identities = 28/78 (35%), Positives = 37/78 (47%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++L+GLP A DI FF + + VHI G GEAF+ F T E A+ M + Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMRT 60 Query: 311 KMTIGTRYVELFPSTPEE 258 TI V L S+ E Sbjct: 61 GGTIKGSKVTLLLSSKTE 78 Score = 34.7 bits (78), Expect = 0.14 Identities = 14/52 (26%), Positives = 30/52 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAK 330 + +P+S T D+++F + E+ VH+ ++G+ G+A V+F + A+ Sbjct: 548 ITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDAR 599
>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 71.2 bits (173), Expect = 1e-12 Identities = 31/73 (42%), Positives = 49/73 (67%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 L+GLP+ A + +I FF + ++ ED+++IAY +GKATGE FVEF K A+C+ K Sbjct: 434 LKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQ 493 Query: 305 TIGTRYVELFPST 267 +G R++++ P T Sbjct: 494 YMGNRFIQVHPIT 506 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 +K++ +P++ +I++I+ FF Y++ +V + Y G TGEA V F + + A A+ Sbjct: 858 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 917 Query: 314 DKMTIGTRYVEL 279 + IG+R V+L Sbjct: 918 NDRPIGSRKVKL 929 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/78 (29%), Positives = 42/78 (53%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 + + G+P+SA D+ FF + L D VH+ G+ G V+F + + A+ ++ Sbjct: 306 VSVHGMPFSAMENDVRDFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363 Query: 311 KMTIGTRYVELFPSTPEE 258 +M + RYVE+ P+T + Sbjct: 364 RMLMIQRYVEVSPATERQ 381 Score = 39.3 bits (90), Expect = 0.006 Identities = 28/78 (35%), Positives = 37/78 (47%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++L+GLP A DI FF + + VHI G GEAF+ F T E A+ M + Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMRT 60 Query: 311 KMTIGTRYVELFPSTPEE 258 TI V L S+ E Sbjct: 61 GGTIKGSKVTLLLSSKTE 78 Score = 34.7 bits (78), Expect = 0.14 Identities = 14/52 (26%), Positives = 30/52 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAK 330 + +P+S T D+++F + E+ VH+ ++G+ G+A V+F + A+ Sbjct: 548 ITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDAR 599
>RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 1002 Score = 70.9 bits (172), Expect = 2e-12 Identities = 31/73 (42%), Positives = 49/73 (67%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 L+GLP+ A + +I FF + ++ ED+++IAY +GKATGE FVEF K A+C+ K Sbjct: 434 LKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQ 493 Query: 305 TIGTRYVELFPST 267 +G R++++ P T Sbjct: 494 YMGNRFIQVHPIT 506 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 +K++ +P++ +I++I+ FF Y++ +V + Y G TGEA V F + + A A+ Sbjct: 928 IKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDL 987 Query: 314 DKMTIGTRYVEL 279 + IG+R V+L Sbjct: 988 NDRPIGSRKVKL 999 Score = 42.0 bits (97), Expect = 9e-04 Identities = 23/78 (29%), Positives = 43/78 (55%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 + + G+P+SA D+ +FF + L D VH+ G+ G V+F + + A+ ++ Sbjct: 306 VSVHGMPFSAMENDVREFF--HGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRN 363 Query: 311 KMTIGTRYVELFPSTPEE 258 +M + RYVE+ P+T + Sbjct: 364 RMLMIQRYVEVSPATERQ 381 Score = 39.3 bits (90), Expect = 0.006 Identities = 28/78 (35%), Positives = 37/78 (47%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++L+GLP A DI FF + + VHI G GEAF+ F T E A+ M + Sbjct: 5 IRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIV----GGELGEAFIVFATDEDARLGMMRT 60 Query: 311 KMTIGTRYVELFPSTPEE 258 TI V L S+ E Sbjct: 61 GGTIKGSKVTLLLSSKTE 78 Score = 35.8 bits (81), Expect = 0.064 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVA 333 + +P+S T D+++F + E+ VH+ ++G+ G+A V+F T + A Sbjct: 548 ITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDA 598
>HNRH3_HUMAN (P31942) Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3)| (hnRNP 2H9) Length = 346 Score = 68.9 bits (167), Expect = 7e-12 Identities = 31/78 (39%), Positives = 52/78 (66%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ + E+I++FF E+ + + + G++TGEAFV+F + E+A+ A+ K Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKH 77 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ E Sbjct: 78 KERIGHRYIEIFRSSRSE 95 Score = 64.3 bits (155), Expect = 2e-10 Identities = 40/75 (53%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLP+ AT DI FF L VHI +DG+ATGEA VEF T E A AM KDK Sbjct: 199 MRGLPFRATENDIANFFSP--LNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKN 256 Query: 305 TIGTRYVELF-PSTP 264 + RY+ELF STP Sbjct: 257 NMQHRYIELFLNSTP 271
>HNRH1_MOUSE (O35737) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)| Length = 448 Score = 68.2 bits (165), Expect = 1e-11 Identities = 31/78 (39%), Positives = 52/78 (66%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ + E+I++FF E+ + + + G++TGEAFV+F + E+A+ A+ K Sbjct: 112 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 171 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ E Sbjct: 172 KERIGHRYIEIFKSSRAE 189 Score = 65.5 bits (158), Expect = 8e-11 Identities = 40/78 (51%), Positives = 45/78 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KDK Sbjct: 292 MRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKA 349 Query: 305 TIGTRYVELFPSTPEEAS 252 + RYVELF ++ AS Sbjct: 350 NMQHRYVELFLNSTAGAS 367 Score = 60.8 bits (146), Expect = 2e-09 Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +K+RGLP+S + +++ +FF + ++ + Y +G+ +GEAFVE + + K A+ Sbjct: 12 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 71 Query: 317 KDKMTIGTRYVELFPSTPEE 258 KD+ T+G RYVE+F S E Sbjct: 72 KDRETMGHRYVEVFKSNNVE 91
>HNRH1_HUMAN (P31943) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)| Length = 448 Score = 68.2 bits (165), Expect = 1e-11 Identities = 31/78 (39%), Positives = 52/78 (66%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ + E+I++FF E+ + + + G++TGEAFV+F + E+A+ A+ K Sbjct: 112 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKH 171 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ E Sbjct: 172 KERIGHRYIEIFKSSRAE 189 Score = 65.5 bits (158), Expect = 8e-11 Identities = 40/78 (51%), Positives = 45/78 (57%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KDK Sbjct: 292 MRGLPYRATENDIYNFFSP--LNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKA 349 Query: 305 TIGTRYVELFPSTPEEAS 252 + RYVELF ++ AS Sbjct: 350 NMQHRYVELFLNSTAGAS 367 Score = 60.8 bits (146), Expect = 2e-09 Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +K+RGLP+S + +++ +FF + ++ + Y +G+ +GEAFVE + + K A+ Sbjct: 12 VKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALK 71 Query: 317 KDKMTIGTRYVELFPSTPEE 258 KD+ T+G RYVE+F S E Sbjct: 72 KDRETMGHRYVEVFKSNNVE 91
>HNRH2_MOUSE (P70333) Heterogeneous nuclear ribonucleoprotein H' (hnRNP H')| Length = 449 Score = 67.4 bits (163), Expect = 2e-11 Identities = 31/78 (39%), Positives = 52/78 (66%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ + E+I++FF E+ + + + G++TGEAFV+F + E+A+ A+ K Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ E Sbjct: 173 KERIGHRYIEIFKSSRAE 190 Score = 64.7 bits (156), Expect = 1e-10 Identities = 38/70 (54%), Positives = 41/70 (58%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KDK Sbjct: 293 MRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKA 350 Query: 305 TIGTRYVELF 276 + RYVELF Sbjct: 351 NMQHRYVELF 360 Score = 64.3 bits (155), Expect = 2e-10 Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +K+RGLP+S + E++++FF + ++ V Y +G+ +GEAFVE + + K A+ Sbjct: 13 VKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALK 72 Query: 317 KDKMTIGTRYVELFPSTPEE 258 KD+ T+G RYVE+F S E Sbjct: 73 KDRETMGHRYVEVFKSNSVE 92
>HNRH2_HUMAN (P55795) Heterogeneous nuclear ribonucleoprotein H' (hnRNP H')| (FTP-3) Length = 449 Score = 67.4 bits (163), Expect = 2e-11 Identities = 31/78 (39%), Positives = 52/78 (66%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLP+ + E+I++FF E+ + + + G++TGEAFV+F + E+A+ A+ K Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 172 Query: 311 KMTIGTRYVELFPSTPEE 258 K IG RY+E+F S+ E Sbjct: 173 KERIGHRYIEIFKSSRAE 190 Score = 64.7 bits (156), Expect = 1e-10 Identities = 38/70 (54%), Positives = 41/70 (58%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLPY AT DI FF L VHI DG+ TGEA VEF T E A AM KDK Sbjct: 293 MRGLPYRATENDIYNFFSP--LNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKA 350 Query: 305 TIGTRYVELF 276 + RYVELF Sbjct: 351 NMQHRYVELF 360 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTE--DNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 +K+RGLP+S + +++++FF + ++ + Y +G+ +GEAFVE + E K A+ Sbjct: 13 VKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLALK 72 Query: 317 KDKMTIGTRYVELFPSTPEE 258 KD+ T+G RYVE+F S E Sbjct: 73 KDRETMGHRYVEVFKSNSVE 92
>GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)| Length = 479 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/78 (42%), Positives = 47/78 (60%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLPYS +DI+ FF + + + YR K TGEA+V+F E+A A+ K Sbjct: 251 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRK-TGEAYVQFEEPEMANQALLKH 309 Query: 311 KMTIGTRYVELFPSTPEE 258 + IG RY+E+FPS E Sbjct: 310 REEIGNRYIEIFPSRRNE 327 Score = 62.0 bits (149), Expect = 8e-10 Identities = 34/70 (48%), Positives = 42/70 (60%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLP+ A +DII FF L + + Y S GKATGEA V F T E A AM KD+ Sbjct: 404 MRGLPFQANAQDIINFFAP--LKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRS 461 Query: 305 TIGTRYVELF 276 + RY+ELF Sbjct: 462 HVQHRYIELF 471 Score = 59.3 bits (142), Expect = 5e-09 Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYEL--TEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 ++ +GLP+S T+ED++ FF + + +E+ +H DGK G+A +E + + + A+ Sbjct: 151 IRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALE 210 Query: 317 KDKMTIGTRYVELFPSTPEE 258 K +M +G RYVE++ E+ Sbjct: 211 KHRMYMGQRYVEVYEINNED 230
>GRSF1_HUMAN (Q12849) G-rich sequence factor 1 (GRSF-1)| Length = 447 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/78 (42%), Positives = 47/78 (60%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 ++LRGLPYS +DI+ FF + + + YR K TGEA+V+F E+A A+ K Sbjct: 219 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRK-TGEAYVQFEEPEMANQALLKH 277 Query: 311 KMTIGTRYVELFPSTPEE 258 + IG RY+E+FPS E Sbjct: 278 REEIGNRYIEIFPSRRNE 295 Score = 62.0 bits (149), Expect = 8e-10 Identities = 34/70 (48%), Positives = 42/70 (60%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKDKM 306 +RGLP+ A +DII FF L + + Y S GKATGEA V F T E A AM KD+ Sbjct: 372 MRGLPFQANAQDIINFFAP--LKPVRITMEYSSSGKATGEADVHFETHEDAVAAMLKDRS 429 Query: 305 TIGTRYVELF 276 + RY+ELF Sbjct: 430 HVHHRYIELF 439 Score = 57.8 bits (138), Expect = 2e-08 Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELT--EDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMC 318 ++ +GLP+S T+ED++ FF + + E+ +H DGK G+A +E + + + A+ Sbjct: 119 IRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALIEMESEQDVQKALE 178 Query: 317 KDKMTIGTRYVELFPSTPEE 258 K +M +G RYVE++ E+ Sbjct: 179 KHRMYMGQRYVEVYEINNED 198
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 45.8 bits (107), Expect = 6e-05 Identities = 25/85 (29%), Positives = 44/85 (51%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 +KLRG P++ T +++I+F L + I + G TG FV+ + E K A+ + Sbjct: 295 VKLRGAPFNVTEKNVIEFLAP--LKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCN 352 Query: 311 KMTIGTRYVELFPSTPEEASRAKPR 237 + +G RY+E+F +R P+ Sbjct: 353 RDYMGGRYIEVFREKQAPTARGPPK 377
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 44.7 bits (104), Expect = 1e-04 Identities = 24/85 (28%), Positives = 44/85 (51%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 +KLRG P++ T +++++F L + I + G TG FV+F E K A+ + Sbjct: 296 VKLRGAPFNVTEKNVMEFLAP--LKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCN 353 Query: 311 KMTIGTRYVELFPSTPEEASRAKPR 237 + +G RY+E+F ++ P+ Sbjct: 354 REYMGGRYIEVFREKNVPTTKGAPK 378 Score = 32.0 bits (71), Expect = 0.93 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L +R LPY++T ED+ K F +Y + + K G AF+ F E A A + Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463 Query: 314 DKMTIGTRYVELFPST-PEEAS 252 D R + + PST +EAS Sbjct: 464 DGQVFQGRMLHVLPSTIKKEAS 485
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 35.0 bits (79), Expect = 0.11 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L L L YSAT E + + F + + + GK+ G AF+EF + E AK A+ Sbjct: 487 LVLSNLSYSATEETLQEVFEKATF----IKVPQNQQGKSKGYAFIEFASFEDAKEALNSC 542 Query: 314 DKMTIGTRYVELFPSTPEEASRAK 243 +KM I R + L P + A+ Sbjct: 543 NKMEIEGRTIRLELQGPRGSPNAR 566
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 35.0 bits (79), Expect = 0.11 Identities = 19/55 (34%), Positives = 33/55 (60%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 321 ++ LP+ AT +D+++ F + + +V + + D A G AFVEF + A+TAM Sbjct: 721 IKNLPFEATRKDLLELFGAFGQLK-SVRVPKKFDQSARGFAFVEFNLMKEAETAM 774
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 34.3 bits (77), Expect = 0.19 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 321 L + L Y+A+ E + + F + ++ + + G+ G AFVEFPTAE AK A+ Sbjct: 463 LIVNNLSYAASEETLQELFKK----ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEAL 515
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 34.3 bits (77), Expect = 0.19 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L L L YSAT E + + F + + + GK+ G AF+EF + E AK A+ Sbjct: 490 LVLSNLSYSATEETLQEVFEKATF----IKVPQNPHGKSKGYAFIEFASFEDAKEALNSC 545 Query: 314 DKMTIGTRYVELFPSTPEEASRAK 243 +KM I R + L P + A+ Sbjct: 546 NKMEIEGRTIRLELQGPRGSPNAR 569
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 33.9 bits (76), Expect = 0.24 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = -1 Query: 479 GLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 GLPY T + K+F + E+ V I R GK+ G FV A+ A CKD Sbjct: 17 GLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA-CKD 71
>EST_ACILW (P18773) Esterase (EC 3.1.1.-)| Length = 303 Score = 33.5 bits (75), Expect = 0.32 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 231 PAPRLRPARLLGSRGEQLHVPGTDGHLIL-AHGSLCNLGRRELHKGLASGLPIRAVRDV 404 P ++RP RL G RGE++ + LI HG LG H+ L + L R V Sbjct: 48 PTVQIRPIRLAGVRGEEIKAQASATQLIFHIHGGAFFLGSLNTHRALMTDLASRTQMQV 106
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 33.1 bits (74), Expect = 0.42 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAY-RSDGKATGEAFVEFPTAEVAKTAM-C 318 L + LP+S T + + F E T NV I Y R ++ G AFV + E AK A+ Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAG-TVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 317 KDKMTIGTRYVEL-FPSTPEEASR 249 D +G R V++ FP P R Sbjct: 175 FDGSQVGGRTVKVNFPEVPRGGER 198
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 33.1 bits (74), Expect = 0.42 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -1 Query: 479 GLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 GLPY T + K+F + E+ V I R GK+ G FV A A CKD Sbjct: 38 GLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRA-CKD 92
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 33.1 bits (74), Expect = 0.42 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L L L YSAT E + + F + + + +GK+ G AF+EF + E AK A+ Sbjct: 487 LVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 542 Query: 314 DKMTIGTRYVELFPSTPEEASRAK 243 +K I R + L P + A+ Sbjct: 543 NKREIEGRAIRLELQGPRGSPNAR 566 Score = 32.0 bits (71), Expect = 0.93 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT-AEVAKTAMC 318 L + LPY T +++ + F ED I S DGK+ G A++EF T A+ KT Sbjct: 394 LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 447 Query: 317 KDKMTIGTRYVELFPSTPEEASRAKPRG 234 K I R + L+ T E+ RG Sbjct: 448 KQGTEIDGRSISLY-YTGEKGQNQDYRG 474
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 33.1 bits (74), Expect = 0.42 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L L L YSAT E + + F + + + +GK+ G AF+EF + E AK A+ Sbjct: 488 LVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 543 Query: 314 DKMTIGTRYVELFPSTPEEASRAK 243 +K I R + L P + A+ Sbjct: 544 NKREIEGRAIRLELQGPRGSPNAR 567 Score = 32.0 bits (71), Expect = 0.93 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT-AEVAKTAMC 318 L + LPY T +++ + F ED I S DGK+ G A++EF T A+ KT Sbjct: 395 LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 448 Query: 317 KDKMTIGTRYVELFPSTPEEASRAKPRG 234 K I R + L+ T E+ RG Sbjct: 449 KQGTEIDGRSISLY-YTGEKGQNQDYRG 475
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 33.1 bits (74), Expect = 0.42 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCK- 315 L L L YSAT E + + F + + + +GK+ G AF+EF + E AK A+ Sbjct: 489 LVLSNLSYSATEETLQEVFEKATF----IKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 544 Query: 314 DKMTIGTRYVELFPSTPEEASRAK 243 +K I R + L P + A+ Sbjct: 545 NKREIEGRAIRLELQGPRGSPNAR 568 Score = 32.0 bits (71), Expect = 0.93 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRS-DGKATGEAFVEFPT-AEVAKTAMC 318 L + LPY T +++ + F ED I S DGK+ G A++EF T A+ KT Sbjct: 396 LLAKNLPYKVTQDELKEVF------EDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 449 Query: 317 KDKMTIGTRYVELFPSTPEEASRAKPRG 234 K I R + L+ T E+ RG Sbjct: 450 KQGTEIDGRSISLY-YTGEKGQNQDYRG 476
>SUUR_DROER (P59597) Protein suppressor of underreplication| Length = 962 Score = 32.3 bits (72), Expect = 0.71 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = +1 Query: 28 ISAKYLIHSFLP*RRSTRPSHQKQERELTQSNRDTIFKHDESTKAKPEQDYALLT 192 I++KYL H L + P K E T I K + KAKPEQ + T Sbjct: 488 INSKYLKHHVLDDAKRNFPRRIKAEGNQTPKTSKRIVKQESKAKAKPEQKKKIKT 542
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 32.0 bits (71), Expect = 0.93 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 321 L ++ +PYS T+E++ + F + ++ I DG G A+VEF + A A+ Sbjct: 326 LFVKNIPYSTTVEELQEIFENAK----DIRIPTGKDGSNKGIAYVEFSNEDEANKAL 378 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAM 321 L + L YSAT + + + F + ++ I ++ G+A G AF+EF +AE AK AM Sbjct: 416 LVVNNLSYSATEDSLREVFEK----ATSIRIP-QNQGRAKGFAFIEFSSAEDAKDAM 467
>DNAJ_METCA (Q607A6) Chaperone protein dnaJ| Length = 377 Score = 31.6 bits (70), Expect = 1.2 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%) Frame = +3 Query: 273 GEQLHVPGTDGHLILAHGSLCNLGR---------RELHKGLASGL--PIRAVRDVHIVLR 419 G +L VP DG ++L + GR + + G+A L +R VH+ Sbjct: 279 GGELEVPTLDGKVVLKIPAETQTGRLFRVRGKGVKPVRGGVAGDLLCRVRVETPVHLNKE 338 Query: 420 QLVLHKELDDVLYGGGVREPTQ 485 Q+ L ++LD+ L GGG Q Sbjct: 339 QIDLIRQLDESLRGGGSHHSPQ 360
>RIPK5_FUGRU (Q4VSN2) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 921 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 168 GTRLCPSDTQGSASCGKLRSVPAPRLRPARLLGSRGEQLH 287 G CP G+ SCG +P P +P +LG E+LH Sbjct: 295 GLLTCP---MGNCSCGAPTQMPTPGAKPQSVLGENFERLH 331
>WC11_BOVIN (P30205) Antigen WC1.1 precursor| Length = 1436 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 7/42 (16%) Frame = -3 Query: 462 HHRGHHQVLCGVRAD-------GGQCAHRVPLGWEGHWRGLC 358 HH G QV+C ++ QC +V + G WR LC Sbjct: 224 HHSGSAQVVCSAYSEVRLMTNGSSQCEGQVEMNISGQWRALC 265
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +2 Query: 338 PRPSGTPQRPRQWPSHPSGTRCAHCPPSARTP 433 P PS P P QWP+ RC CP A P Sbjct: 113 PEPSA-PCAPEQWPAGEEPVRCDACPEGAALP 143
>YRA1_YEAST (Q12159) RNA annealing protein YRA1| Length = 226 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/85 (24%), Positives = 37/85 (43%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEFPTAEVAKTAMCKD 312 + + GLP + + +FF V ++Y G++TG A + F E+A+ Sbjct: 80 VNVEGLPRDIKQDAVREFFASQVGGVQRVLLSYNERGQSTGMANITFKNGELAR------ 133 Query: 311 KMTIGTRYVELFPSTPEEASRAKPR 237 R VE F +P + R++ R Sbjct: 134 ------RAVERFNGSPIDGGRSRLR 152
>GCH2_PSESM (Q889Q3) GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II)| Length = 205 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +1 Query: 106 ELTQSNRDTIFKHDESTKAKPEQDYALLTPRVQHLVVSCVQCL---PRGFALLASSGV 270 EL DT+ ++ A ++DYA+ P +QHL V ++ + PR L G+ Sbjct: 106 ELQDGGADTVEANERLGFAADQRDYAICLPMLQHLGVQSLRLMTNNPRKVKALTDMGI 163
>ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3.2.1.6)| (Endo-1,4-beta-glucanase 1) (Endo-1,3-beta-glucanase 1) (Laminarinase-1) (Daughter specific expression protein 4) Length = 1117 Score = 30.0 bits (66), Expect = 3.5 Identities = 20/44 (45%), Positives = 25/44 (56%) Frame = +1 Query: 355 STKASPVAFPSERYAMCTLSSVSSYSTKNLMMSSMVAE*GSPRS 486 ST ASP A+PS R + SVS YST + + S + E GS S Sbjct: 270 STTASP-AYPSNRTQITLSPSVSLYSTTSPIYPSNITENGSSPS 312
>YI31_AGRT7 (P05680) Insertion element IS136 hypothetical 16.9 kDa protein| Length = 159 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = +2 Query: 302 WSSYPCTWQSLQPRPSGTPQRPRQWPSHP--SGTRCAHCPPS 421 W + PC W+S QP R W P +G R A P+ Sbjct: 81 WVTTPCYWRSTQPFARAASTMARSWSCAPTCAGARTAWSSPA 122
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -1 Query: 485 LRGLPYSATIEDIIKFFVEYELTEDNVHIAYRSDGKATGEAFVEF 351 +R +PY AT E + F ++ + + + +S G A G AFV F Sbjct: 294 VRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAF 338
>RNP1_YEAST (P32385) Ribonucleoprotein 1| Length = 249 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 9/56 (16%) Frame = -1 Query: 491 LKLRGLPYSATIEDIIKFF---------VEYELTEDNVHIAYRSDGKATGEAFVEF 351 L ++ +P +T ED+ K F V EL + + + SD TGEAF++F Sbjct: 142 LYVKNIPMKSTNEDLAKIFGVDPKNINFVRRELVDLRTNKVFFSDEFHTGEAFIKF 197
>RL4_CAEEL (O02056) 60S ribosomal protein L4| Length = 344 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/63 (31%), Positives = 28/63 (44%) Frame = +2 Query: 26 QSQQSISYTVFYPEDAVRDRLIRNRSAN*HNPTEIQFLSMMRAQRLNRNKIMPF*HPGFS 205 Q +Q + V Y +DA R RN I + +M +RLN K+ P H G Sbjct: 198 QHKQKLGPVVIYGQDAECARAFRN----------IPGVDVMNVERLNLLKLAPGGHLGRL 247 Query: 206 ILW 214 I+W Sbjct: 248 IIW 250
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 67 RRSTRPSHQKQERELTQSNRDTIFKHDESTKAKP 168 R R ++Q+R L +S DT F H + AKP Sbjct: 477 RMRMRTQRRRQQRALARSGADTSFPHPMDSSAKP 510
>NANK_YERPS (Q668J9) Putative N-acetylmannosamine kinase (EC 2.7.1.60) (ManNAc| kinase) Length = 290 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +3 Query: 258 LLGSRGEQLHVPGTDGHLIL-AHGSLCNLGRRELHKGLASGLPIRA 392 L+G RG H+ GH + HG LC GRR + +ASG I A Sbjct: 144 LVGQRGLAGHI----GHTLSDPHGVLCGCGRRGCVESVASGTAIGA 185
>NANK_YERPE (Q8ZCG9) Putative N-acetylmannosamine kinase (EC 2.7.1.60) (ManNAc| kinase) Length = 290 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +3 Query: 258 LLGSRGEQLHVPGTDGHLIL-AHGSLCNLGRRELHKGLASGLPIRA 392 L+G RG H+ GH + HG LC GRR + +ASG I A Sbjct: 144 LVGQRGLAGHI----GHTLSDPHGVLCGCGRRGCVESVASGTAIGA 185
>NANK_HAEIN (P44541) Putative N-acetylmannosamine kinase (EC 2.7.1.60) (ManNAc| kinase) Length = 300 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +3 Query: 264 GSRGEQLHVPGTDGHLIL-AHGSLCNLGRRELHKGLASGLPIRAV 395 GSRG H+ GH + +G++C GRR + +ASG I AV Sbjct: 146 GSRGIAGHI----GHTLADPNGAICGCGRRGCVEAIASGRAIEAV 186
>CP52A_CANTR (P10615) Cytochrome P450 52A1 (EC 1.14.14.-) (CYPLIIA1)| (Alkane-inducible P450-ALK1) Length = 543 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Frame = +1 Query: 289 YLVPMVILSLHM-AVFATSAVGNSTKASPVAFPSERYAMCTLSS--VSSYSTKNLMM 450 Y +P+VILSL++ ++ T + KA P+A + Y C ++ + Y +K +M Sbjct: 31 YFIPLVILSLNLISMLHTKYLERKFKAKPLAVYVQDYTFCLITPLVLIYYKSKGTVM 87
>TNR4_RAT (P15725) Tumor necrosis factor receptor superfamily member 4| precursor (OX40L receptor) (OX40 antigen) (MRC OX40) Length = 271 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 Query: 362 RPRQWPSHPSGTRCAHCPPSARTPQRT**CPLW 460 +PRQ SH G C CPP +P C W Sbjct: 109 QPRQDSSHKLGVDCVPCPPGHFSPGSNQACKPW 141
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 338 PRPSGTPQRPRQWPSHPSGTRCAHCPPSARTP 433 P PS P P WP+ RC CP A P Sbjct: 109 PEPSA-PCAPEPWPAGEEPVRCDACPEGAALP 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,189,831 Number of Sequences: 219361 Number of extensions: 1558136 Number of successful extensions: 6005 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5974 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
