ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17p01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
4dbj|AK104839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
5dbj|AK068678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
6dbj|AK066955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
7ref|XM_816900.1| Trypanosoma cruzi strain CL Brener mucin-associ... 44 0.49
8ref|XM_363962.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.9
9ref|XM_950584.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 42 1.9
10gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete seq... 42 1.9
11emb|CR678456.8| Zebrafish DNA sequence from clone DKEY-195L19 in... 42 1.9
12gb|AC112698.4| Homo sapiens BAC clone RP11-692E14 from 4, comple... 42 1.9
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
14dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
15emb|AJ324228.1|HSA324228 Homo sapiens genomic sequence surroundi... 42 1.9
16emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encepha... 42 1.9
17ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependen... 40 7.6
18ref|XM_640287.1| Dictyostelium discoideum hypothetical protein (... 40 7.6
19gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
20gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
21gb|AC102458.8| Mus musculus chromosome 1, clone RP24-312N11, com... 40 7.6
22gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome... 40 7.6
23gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome ... 40 7.6
24gb|AC163753.5| Pan troglodytes BAC clone CH251-295G5 from chromo... 40 7.6
25emb|BX511006.10| Zebrafish DNA sequence from clone DKEY-106F13 i... 40 7.6
26ref|XM_537233.2| PREDICTED: Canis familiaris similar to CG5986-P... 40 7.6
27gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, comp... 40 7.6
28gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, com... 40 7.6
29emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 i... 40 7.6
30emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in... 40 7.6
31gb|AC160567.2| Pan troglodytes BAC clone CH251-304P1 from chromo... 40 7.6
32ref|XM_687464.1| PREDICTED: Danio rerio similar to 26S proteasom... 40 7.6
33gb|AC158382.2| Mus musculus BAC clone RP24-105N17 from chromosom... 40 7.6
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
36emb|BX088690.9| Zebrafish DNA sequence from clone CH211-211A20 i... 40 7.6
37dbj|AP000037.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.6
38gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098... 40 7.6
39gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, compl... 40 7.6
40ref|NM_001017624.1| Danio rerio proteasome (prosome, macropain) ... 40 7.6
41emb|AL928868.5| Mouse DNA sequence from clone RP23-428O15 on chr... 40 7.6
42emb|BX255877.14| Zebrafish DNA sequence from clone CH211-254C9, ... 40 7.6
43dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
44emb|AL954210.1| Pan troglodytes chromosome 22 clone RP43-012J05 ... 40 7.6
45dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.6
46emb|BX890618.14| Zebrafish DNA sequence from clone DKEYP-18A5 in... 40 7.6
47emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 i... 40 7.6
48emb|BX640593.8| Zebrafish DNA sequence from clone DKEY-183C16 in... 40 7.6
49emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on ch... 40 7.6
50dbj|AP000276.3| Homo sapiens genomic DNA, chromosome 21 clone:CM... 40 7.6
51dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.6
52gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, com... 40 7.6
53gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, com... 40 7.6
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
55emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial se... 40 7.6
56gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, com... 40 7.6
57gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) g... 40 7.6
58gb|BC092825.1| Danio rerio proteasome (prosome, macropain) 26S s... 40 7.6
59dbj|AP000275.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.6
60dbj|AP000181.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.6
61dbj|AP000105.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 7.6 
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0056G13, complete sequence
          Length = 148011

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 483   ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
             |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 83476 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 83417

                          
Query: 543   gggagagtgaacg 555
             | || ||||||||
Sbjct: 83416 gagaaagtgaacg 83404



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 390   tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
             ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 83569 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 83527
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                          
Query: 483    ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
              |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 928279 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 928220

                           
Query: 543    gggagagtgaacg 555
              | || ||||||||
Sbjct: 928219 gagaaagtgaacg 928207



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 390    tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
              ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 928372 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 928330
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                          
Query: 483    ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
              |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 928277 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 928218

                           
Query: 543    gggagagtgaacg 555
              | || ||||||||
Sbjct: 928217 gagaaagtgaacg 928205



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 390    tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
              ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 928370 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 928328
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>dbj|AK104839.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F01, full
           insert sequence
          Length = 1335

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                       
Query: 483 ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
           |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 970 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 911

                        
Query: 543 gggagagtgaacg 555
           | || ||||||||
Sbjct: 910 gagaaagtgaacg 898



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 390  tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
            ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 1063 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 1021
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>dbj|AK068678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158H22, full
           insert sequence
          Length = 997

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 483 ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
           |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 399 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 458

                        
Query: 543 gggagagtgaacg 555
           | || ||||||||
Sbjct: 459 gagaaagtgaacg 471



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 390 tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
           ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 306 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 348
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>dbj|AK066955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C10, full
            insert sequence
          Length = 1478

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                        
Query: 483  ccggtaagtacttgaggattgaatgaccttcaggatccgagatgtcaaccatgaaaagtg 542
            |||| ||||||||||||| ||||| |||  ||||||| ||| | ||||||||||||| ||
Sbjct: 1091 ccggcaagtacttgaggactgaataaccagcaggatcagaggtatcaaccatgaaaactg 1032

                         
Query: 543  gggagagtgaacg 555
            | || ||||||||
Sbjct: 1031 gagaaagtgaacg 1019



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 390  tcatctgcctgtatctagcaacaagatggtgccactccagcga 432
            ||||| ||||||| |||||||||||   |||||||||||||||
Sbjct: 1184 tcatccgcctgtacctagcaacaagtgagtgccactccagcga 1142
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>ref|XM_816900.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508221.210) partial mRNA
          Length = 876

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 333 ccacctacatcatcttcatgatcatcgtct 362
           |||||| |||||||||||| ||||||||||
Sbjct: 266 ccacctgcatcatcttcatcatcatcgtct 237
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>ref|XM_363962.1| Magnaporthe grisea 70-15 hypothetical protein (MG01889.4) partial
            mRNA
          Length = 3003

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 338  tacatcatcttcatgatcatc 358
            |||||||||||||||||||||
Sbjct: 1021 tacatcatcttcatgatcatc 1041
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>ref|XM_950584.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU09_1260)
           partial mRNA
          Length = 981

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 193 agaatcagcttcagaaatgtt 213
           |||||||||||||||||||||
Sbjct: 361 agaatcagcttcagaaatgtt 381
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>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence
          Length = 166207

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    caaaagatttctgcaatccgt 51
             |||||||||||||||||||||
Sbjct: 60870 caaaagatttctgcaatccgt 60890
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>emb|CR678456.8| Zebrafish DNA sequence from clone DKEY-195L19 in linkage group 19,
             complete sequence
          Length = 110720

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    ttatttgaaaagtaatatatg 85
             |||||||||||||||||||||
Sbjct: 60224 ttatttgaaaagtaatatatg 60204
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>gb|AC112698.4| Homo sapiens BAC clone RP11-692E14 from 4, complete sequence
          Length = 65335

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    agatttctgcaatccgtccac 55
             |||||||||||||||||||||
Sbjct: 41534 agatttctgcaatccgtccac 41554
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 65      ttatttgaaaagtaatatatg 85
               |||||||||||||||||||||
Sbjct: 4894119 ttatttgaaaagtaatatatg 4894139



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 65      ttatttgaaaagtaatatatg 85
               |||||||||||||||||||||
Sbjct: 4893938 ttatttgaaaagtaatatatg 4893958
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>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    ttatttgaaaagtaatatatg 85
             |||||||||||||||||||||
Sbjct: 38858 ttatttgaaaagtaatatatg 38878



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    ttatttgaaaagtaatatatg 85
             |||||||||||||||||||||
Sbjct: 38677 ttatttgaaaagtaatatatg 38697
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>emb|AJ324228.1|HSA324228 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZG16C
          Length = 767

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 493 cttgaggattgaatgaccttc 513
           |||||||||||||||||||||
Sbjct: 685 cttgaggattgaatgaccttc 705
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>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 251002

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    agaatcagcttcagaaatgtt 213
              |||||||||||||||||||||
Sbjct: 144774 agaatcagcttcagaaatgtt 144754
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>ref|NM_124075.2| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/
           nucleoside-triphosphatase/ nucleotide binding /
           serine-type endopeptidase/ serine-type p> AT5G47040
           mRNA, complete cds
          Length = 2704

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 337 ctacatcatcttcatgatcatcgt 360
           ||||||||||||||| ||||||||
Sbjct: 944 ctacatcatcttcatcatcatcgt 921
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>ref|XM_640287.1| Dictyostelium discoideum hypothetical protein (DDB0168617), partial
           mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 335 acctacatcatcttcatgatcatc 358
           ||||||||||||||||| ||||||
Sbjct: 630 acctacatcatcttcatcatcatc 653
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
              complete sequence
          Length = 187972

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    gcttcagaaatgtttgcaac 219
              ||||||||||||||||||||
Sbjct: 187910 gcttcagaaatgtttgcaac 187929
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>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05,
             complete sequence
          Length = 82985

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gcttcagaaatgtttgcaac 219
             ||||||||||||||||||||
Sbjct: 62959 gcttcagaaatgtttgcaac 62940
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>gb|AC102458.8| Mus musculus chromosome 1, clone RP24-312N11, complete sequence
          Length = 167263

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   tacatcatcttcatgatcat 357
             ||||||||||||||||||||
Sbjct: 22329 tacatcatcttcatgatcat 22348
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>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence
          Length = 208557

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tcctctgggttccagaatca 199
             ||||||||||||||||||||
Sbjct: 32464 tcctctgggttccagaatca 32483
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>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence
          Length = 215151

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    tcctctgggttccagaatca 199
              ||||||||||||||||||||
Sbjct: 161079 tcctctgggttccagaatca 161098
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>gb|AC163753.5| Pan troglodytes BAC clone CH251-295G5 from chromosome unknown, complete
             sequence
          Length = 176946

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 98111 tttgaaaagtaatatatgac 98130
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>emb|BX511006.10| Zebrafish DNA sequence from clone DKEY-106F13 in linkage group 7,
             complete sequence
          Length = 220514

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aatatatgaccaatattcac 97
             ||||||||||||||||||||
Sbjct: 66492 aatatatgaccaatattcac 66511
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>ref|XM_537233.2| PREDICTED: Canis familiaris similar to CG5986-PA (LOC480111), mRNA
          Length = 1405

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 cgagatgtcaaccatgaaaa 539
           ||||||||||||||||||||
Sbjct: 371 cgagatgtcaaccatgaaaa 390
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>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence
          Length = 170074

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   caagatggtgccactccagc 430
             ||||||||||||||||||||
Sbjct: 20080 caagatggtgccactccagc 20061
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>gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, complete sequence
          Length = 176063

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   caagatggtgccactccagc 430
             ||||||||||||||||||||
Sbjct: 89041 caagatggtgccactccagc 89060
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>emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 in linkage group 6,
             complete sequence
          Length = 218236

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    aaatggcatttatttgaaaa 75
             ||||||||||||||||||||
Sbjct: 90835 aaatggcatttatttgaaaa 90816
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>emb|BX510930.15| Zebrafish DNA sequence from clone DKEY-91L18 in linkage group 14,
            complete sequence
          Length = 95848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   aatatatgaccaatattcac 97
            ||||||||||||||||||||
Sbjct: 8208 aatatatgaccaatattcac 8227
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>gb|AC160567.2| Pan troglodytes BAC clone CH251-304P1 from chromosome unknown, complete
             sequence
          Length = 174998

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 11652 tttgaaaagtaatatatgac 11671
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>ref|XM_687464.1| PREDICTED: Danio rerio similar to 26S proteasome non-ATPase
            regulatory subunit 4 (26S proteasome regulatory subunit
            S5A) (Rpn10) (Multiubiquitin chain binding protein)
            (Antisecretory factor-1) (AF) (ASF) (LOC564108), mRNA
          Length = 1496

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  aaccgaaaacacaagagaaa 122
            ||||||||||||||||||||
Sbjct: 1407 aaccgaaaacacaagagaaa 1388
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>gb|AC158382.2| Mus musculus BAC clone RP24-105N17 from chromosome 12, complete sequence
          Length = 166347

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     aaatggcatttatttgaaaa 75
              ||||||||||||||||||||
Sbjct: 125675 aaatggcatttatttgaaaa 125656
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 365      gatgccactactgctgctct 384
                ||||||||||||||||||||
Sbjct: 16743058 gatgccactactgctgctct 16743039
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      gcttcagaaatgtttgcaac 219
                ||||||||||||||||||||
Sbjct: 12850731 gcttcagaaatgtttgcaac 12850750
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>emb|BX088690.9| Zebrafish DNA sequence from clone CH211-211A20 in linkage group 18,
              complete sequence
          Length = 218713

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     aatatatgaccaatattcac 97
              ||||||||||||||||||||
Sbjct: 125031 aatatatgaccaatattcac 125012
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>dbj|AP000037.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 8/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 73376 tttgaaaagtaatatatgac 73357
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>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4,
             complete sequence
          Length = 125623

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   acctacatcatcttcatgatcatc 358
             ||||||||||||||||| ||||||
Sbjct: 98484 acctacatcatcttcatcatcatc 98461
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>gb|AC144753.3| Ornithorhynchus anatinus clone OA_Bb-228F7, complete sequence
          Length = 116899

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   tcatcttcatgatcatcgtc 361
             ||||||||||||||||||||
Sbjct: 89567 tcatcttcatgatcatcgtc 89586
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>ref|NM_001017624.1| Danio rerio proteasome (prosome, macropain) 26S subunit, non-ATPase,
            4 (psmd4), mRNA
          Length = 1522

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  aaccgaaaacacaagagaaa 122
            ||||||||||||||||||||
Sbjct: 1418 aaccgaaaacacaagagaaa 1399
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>emb|AL928868.5| Mouse DNA sequence from clone RP23-428O15 on chromosome 2, complete
              sequence
          Length = 146169

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    aaaacacaagagaaaacacgacca 131
              ||||||||||||||||||| ||||
Sbjct: 134478 aaaacacaagagaaaacacaacca 134501
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>emb|BX255877.14| Zebrafish DNA sequence from clone CH211-254C9, complete sequence
          Length = 152976

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   aaccgaaaacacaagagaaa 122
             ||||||||||||||||||||
Sbjct: 42520 aaccgaaaacacaagagaaa 42501
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>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0061E21
          Length = 155085

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcttcagaaatgtttgcaac 219
             ||||||||||||||||||||
Sbjct: 51249 gcttcagaaatgtttgcaac 51268
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>emb|AL954210.1| Pan troglodytes chromosome 22 clone RP43-012J05 map 22q22.11, complete
             sequence
          Length = 168835

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 61354 tttgaaaagtaatatatgac 61335
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>dbj|AB013394.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD22
          Length = 85661

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 337   ctacatcatcttcatgatcatcgt 360
             ||||||||||||||| ||||||||
Sbjct: 64983 ctacatcatcttcatcatcatcgt 65006
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>emb|BX890618.14| Zebrafish DNA sequence from clone DKEYP-18A5 in linkage group 18,
            complete sequence
          Length = 88593

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   aatatatgaccaatattcac 97
            ||||||||||||||||||||
Sbjct: 3326 aatatatgaccaatattcac 3307
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>emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 in linkage group 18,
             complete sequence
          Length = 156691

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aatatatgaccaatattcac 97
             ||||||||||||||||||||
Sbjct: 90083 aatatatgaccaatattcac 90102
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>emb|BX640593.8| Zebrafish DNA sequence from clone DKEY-183C16 in linkage group 4,
             complete sequence
          Length = 218192

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tatttgaaaagtaatatatg 85
             ||||||||||||||||||||
Sbjct: 53381 tatttgaaaagtaatatatg 53400
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>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete
              sequence
          Length = 240699

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     aaatggcatttatttgaaaa 75
              ||||||||||||||||||||
Sbjct: 202850 aaatggcatttatttgaaaa 202869
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>dbj|AP000276.3| Homo sapiens genomic DNA, chromosome 21 clone:CMC21-55A9, complete
            sequence
          Length = 5892

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 68   tttgaaaagtaatatatgac 87
            ||||||||||||||||||||
Sbjct: 3008 tttgaaaagtaatatatgac 2989
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>dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, section 58/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tttgaaaagtaatatatgac 87
              ||||||||||||||||||||
Sbjct: 277513 tttgaaaagtaatatatgac 277494
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>gb|AC093478.9| Mus musculus chromosome 10, clone RP23-58C12, complete sequence
          Length = 242324

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    agcaacaagatggtgccact 425
              ||||||||||||||||||||
Sbjct: 146775 agcaacaagatggtgccact 146794
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>gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, complete sequence
          Length = 173706

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ttccagaatcagcttcagaa 208
              ||||||||||||||||||||
Sbjct: 129602 ttccagaatcagcttcagaa 129583
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 365      gatgccactactgctgctct 384
                ||||||||||||||||||||
Sbjct: 16696291 gatgccactactgctgctct 16696272
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>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 116974

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   gatgccactactgctgctct 384
             ||||||||||||||||||||
Sbjct: 42343 gatgccactactgctgctct 42362
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>gb|AC111124.8| Mus musculus chromosome 7, clone RP23-331A21, complete sequence
          Length = 228220

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 ttccagaatcagcttcagaa 208
           ||||||||||||||||||||
Sbjct: 390 ttccagaatcagcttcagaa 371
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>gb|AF033862.1|AF033862 Arabidopsis thaliana Lon protease (LON) gene, complete cds
          Length = 6848

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 337  ctacatcatcttcatgatcatcgt 360
            ||||||||||||||| ||||||||
Sbjct: 3429 ctacatcatcttcatcatcatcgt 3406
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>gb|BC092825.1| Danio rerio proteasome (prosome, macropain) 26S subunit, non-ATPase,
            4, mRNA (cDNA clone MGC:110247 IMAGE:7397606), complete
            cds
          Length = 1522

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  aaccgaaaacacaagagaaa 122
            ||||||||||||||||||||
Sbjct: 1418 aaccgaaaacacaagagaaa 1399
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>dbj|AP000275.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1866, complete sequence
          Length = 74600

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 73376 tttgaaaagtaatatatgac 73357
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>dbj|AP000181.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 8/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 79352 tttgaaaagtaatatatgac 79333
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>dbj|AP000105.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 8/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tttgaaaagtaatatatgac 87
             ||||||||||||||||||||
Sbjct: 79352 tttgaaaagtaatatatgac 79333


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,922,353
Number of Sequences: 3902068
Number of extensions: 4922353
Number of successful extensions: 109132
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108800
Number of HSP's gapped (non-prelim): 332
length of query: 559
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 536
effective length of database: 17,143,297,704
effective search space: 9188807569344
effective search space used: 9188807569344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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