ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18e05 |
|---|---|
| Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 232 bits (591), Expect = 8e-61 Identities = 111/150 (74%), Positives = 120/150 (80%) Frame = -3 Query: 615 LVPPETAIPWFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 L+P ETA+ WFQ G IPPAGTY YWAD YTLFV EMAL+GFAEHRR QDW PGSMGKQY Sbjct: 125 LIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQY 184 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 FLGLEK LGGSGDPAYPGGP+FNPLGFG KNGRLAMLA LG +QA Sbjct: 185 FLGLEKGLGGSGDPAYPGGPLFNPLGFG-KDEKSMKELKLKEIKNGRLAMLAILGYFIQA 243 Query: 255 IFTGVGPFQNLLDHLSDPVNNNILTSLKFH 166 + TGVGP+QNLLDHL+DPVNNN+LTSLKFH Sbjct: 244 LVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 96.3 bits (238), Expect = 6e-20 Identities = 59/126 (46%), Positives = 70/126 (55%) Frame = -3 Query: 561 AGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPG 382 AG QY+A TLFV E L + E RR QD NPGS+ + ++Y G+ YPG Sbjct: 130 AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEVGYPG 187 Query: 381 GPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP 202 G IFNPL F NGRLAMLAFLG +Q TG GPF+NLL HLSDP Sbjct: 188 G-IFNPLNFAPTQEAKEKELA-----NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241 Query: 201 VNNNIL 184 +N I+ Sbjct: 242 WHNTIV 247
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 92.8 bits (229), Expect = 7e-19 Identities = 54/128 (42%), Positives = 67/128 (52%) Frame = -3 Query: 561 AGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPG 382 AG +Y+ D TLFV E+ LIG+AE RR D PG + K G D YPG Sbjct: 141 AGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPG 198 Query: 381 GPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP 202 G F+PLG+G+ KNGRLAMLA +G Q I+TG GP NL HL+DP Sbjct: 199 GLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 Query: 201 VNNNILTS 178 + I + Sbjct: 259 GHATIFAA 266
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 92.0 bits (227), Expect = 1e-18 Identities = 53/128 (41%), Positives = 67/128 (52%) Frame = -3 Query: 561 AGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPG 382 AG +Y+ D TLF+ E+ LIG+AE RR D PG + K G D YPG Sbjct: 141 AGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPG 198 Query: 381 GPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP 202 G F+PLG+G+ KNGRLAMLA +G Q I+TG GP NL HL+DP Sbjct: 199 GLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 Query: 201 VNNNILTS 178 + I + Sbjct: 259 GHATIFAA 266
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 68.6 bits (166), Expect = 1e-11 Identities = 49/142 (34%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTLFV--------FEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P + F++ L+G E R+ Sbjct: 132 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN------------ 179 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+ G G+ YPGG F+PLG NGRLAM + G +QA Sbjct: 180 --GLDGV--GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIK-NGRLAMFSMFGFFVQA 234 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL DPV NN Sbjct: 235 IVTGKGPLENLFDHLDDPVANN 256
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 68.2 bits (165), Expect = 2e-11 Identities = 49/142 (34%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTLFV--------FEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P + F++ L+G E R+ PG Sbjct: 129 WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL--PGV----- 181 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 G G+ YPGG F+PLG NGRLAM + G +QA Sbjct: 182 ---------GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NLLDHL +PV NN Sbjct: 232 IVTGKGPLENLLDHLDNPVANN 253
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/75 (50%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 184 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 241 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHLSDPVNNN Sbjct: 242 LENLADHLSDPVNNN 256
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 67.4 bits (163), Expect = 3e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 180 LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 238 LENLADHLADPVNNN 252
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 67.4 bits (163), Expect = 3e-11 Identities = 50/142 (35%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 132 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVI 187 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 DP YPGG F+PLG NGRLAM + G +QA Sbjct: 188 ------------DPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 233 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPVNNN Sbjct: 234 IVTGKGPLENLADHLADPVNNN 255
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 67.4 bits (163), Expect = 3e-11 Identities = 51/142 (35%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRV----GGGPLGE-- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPGG F+PLG NGRLAM + G +QA Sbjct: 184 --GL--------DPIYPGGA-FDPLGLADDPDAFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPV NN Sbjct: 232 IVTGKGPIENLFDHLADPVANN 253
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 67.4 bits (163), Expect = 3e-11 Identities = 50/142 (35%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+G E R+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG----------- 178 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 E LG + D YPGG F+PLG T NGRLAM + G +QA Sbjct: 179 ----EGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 232 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPVNNN Sbjct: 233 IVTGKGPLENLADHLADPVNNN 254
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 67.4 bits (163), Expect = 3e-11 Identities = 51/142 (35%), Positives = 64/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ P Sbjct: 139 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GP------- 189 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 LG DP YPGG F+PLG NGRLAM + G +QA Sbjct: 190 -------LGEVTDPIYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 240 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPVNNN Sbjct: 241 IVTGKGPIENLADHLADPVNNN 262
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 67.0 bits (162), Expect = 4e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 172 LGEVTDPIYPGGS-FDPLGLADDPEALAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 229 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 230 LENLADHLADPVNNN 244
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 67.0 bits (162), Expect = 4e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 122 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 179 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 180 LENLADHLADPVNNN 194
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 67.0 bits (162), Expect = 4e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 171 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 228 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 229 LENLADHLADPVNNN 243
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 67.0 bits (162), Expect = 4e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 NL+DHL+DPVNNN Sbjct: 241 LDNLVDHLADPVNNN 255
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 67.0 bits (162), Expect = 4e-11 Identities = 49/142 (34%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 126 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV 181 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 DP YPGG F+PLG NGRLAM + G +QA Sbjct: 182 ------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 227 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPVNNN Sbjct: 228 IVTGKGPLENLADHLADPVNNN 249
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 67.0 bits (162), Expect = 4e-11 Identities = 51/142 (35%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 130 WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRV----GGGPLGE-- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPGG F+PLG NGRLAM + G +QA Sbjct: 184 --GL--------DPLYPGGA-FDPLGLADDPDSFAELKVKELK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP QNL DH++DPV NN Sbjct: 232 IVTGKGPIQNLYDHVADPVANN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 67.0 bits (162), Expect = 4e-11 Identities = 49/142 (34%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV 185 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 DP YPGG F+PLG NGRLAM + G +QA Sbjct: 186 ------------DPLYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPVNNN Sbjct: 232 IVTGKGPLENLADHLADPVNNN 253
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 32 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 89 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 90 LENLADHLADPVNNN 104
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 180 LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 238 LENLADHLADPVNNN 252
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 194 LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 252 IENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 194 LGEVTDPIYPGGN-FDPLGLADDPDAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 252 IENLADHLADPVNNN 266
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKHIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 43/75 (57%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG + D YPGG F+PLG T NGRLAM + G +QAI TG GP Sbjct: 183 LGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 IENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 43/75 (57%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG + D YPGG F+PLG T NGRLAM + G +QAI TG GP Sbjct: 183 LGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 241 IENLADHLADPVNNN 255
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGT-FDPLGLADDPEAFADVKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 185 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 242 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 243 LENLADHLADPVNNN 257
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 66.2 bits (160), Expect = 7e-11 Identities = 53/142 (37%), Positives = 67/142 (47%), Gaps = 6/142 (4%) Frame = -3 Query: 588 WFQAGAIPPAG-TYQYWAD--PYTLF---VFEMALIGFAEHRRLQDWYNPGSMGKQYFLG 427 WF+ GA+ G T Y+ P L V E+ L+G AE+ R+ + G Sbjct: 147 WFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITN-------------G 193 Query: 426 LEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFT 247 L+ D +PGGP F+PLG NGRLAM A LG +QA T Sbjct: 194 LD-----FEDKLHPGGP-FDPLGLAKDPEQGALLKVKEIK-NGRLAMFAMLGFFIQAYVT 246 Query: 246 GVGPFQNLLDHLSDPVNNNILT 181 G GP +NL HLSDP NN+LT Sbjct: 247 GEGPVENLAKHLSDPFGNNLLT 268
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 7e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVIDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 7e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVIDPLYPGGS-FDPLGLADDPEAFAELEVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 65.9 bits (159), Expect = 9e-11 Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 128 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRV----GGGPLGE-- 181 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+K YPGG F+PLG NGRLAM + G +QA Sbjct: 182 --GLDK--------VYPGGA-FDPLGLADDPDTFAELKVKELK-NGRLAMFSMFGFFVQA 229 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 230 IVTGKGPIENLFDHVADPVANN 251
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 9e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DH++DPVNNN Sbjct: 241 LENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 9e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DH++DPVNNN Sbjct: 241 LENLADHIADPVNNN 255
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 65.9 bits (159), Expect = 9e-11 Identities = 37/75 (49%), Positives = 41/75 (54%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGVVVDPLYPGGS-FDPLGLAEDPEAFAELKVKETK-NGRLAMFSMFGFFIQAIVTGKGP 240 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL DPVNNN Sbjct: 241 LENLADHLVDPVNNN 255
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 65.9 bits (159), Expect = 9e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 178 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 235 Query: 234 FQNLLDHLSDPVNNN 190 +NL DH++DPVNNN Sbjct: 236 LENLADHIADPVNNN 250
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 65.9 bits (159), Expect = 9e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QA+ TG GP Sbjct: 182 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQALVTGKGP 239 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 64.7 bits (156), Expect = 2e-10 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP Y GG F+PLG G NGRLAM + G +QAI TG GP Sbjct: 180 LGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 238 IENLADHLTDPVNNN 252
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 64.7 bits (156), Expect = 2e-10 Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 129 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRV----GGGPLGE-- 182 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPGG F+PLG NGRLAM + G +QA Sbjct: 183 --GL--------DPLYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 230 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 231 IVTGKGPIENLADHIADPVANN 252
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 64.7 bits (156), Expect = 2e-10 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG GRLAML+ G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELK-KGRLAMLSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DH++DPVNNN Sbjct: 239 LENLADHIADPVNNN 253
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 179 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 236 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+ PVNNN Sbjct: 237 LENLADHLAGPVNNN 251
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G + AI TG GP Sbjct: 144 LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELK-NGRLAMFSMFGFFVPAIVTGKGP 201 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 202 LENLADHLADPVNNN 216
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 63.9 bits (154), Expect = 4e-10 Identities = 35/75 (46%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEIVDPLYPGGS-FDPLGLAERPQAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 234 FQNLLDHLSDPVNNN 190 ++L DH++DPVNNN Sbjct: 240 LEDLADHIADPVNNN 254
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 63.5 bits (153), Expect = 5e-10 Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 102 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRV----GGGPLGE-- 155 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+K YPGG F+PLG NGRLAM + G +QA Sbjct: 156 --GLDKI--------YPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 203 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 204 IVTGKGPIENLSDHIADPVANN 225
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 63.5 bits (153), Expect = 5e-10 Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRV----GGGPLGE-- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+K YPGG F+PLG NGRLAM + G +QA Sbjct: 184 --GLDKI--------YPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 232 IVTGKGPIENLYDHVADPVANN 253
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 63.5 bits (153), Expect = 5e-10 Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+GF E R+ G +G+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV----GGGPLGE-- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+K YPGG F+PLG NGRLAM + G +QA Sbjct: 184 --GLDKI--------YPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 232 IVTGKGPIENLSDHINDPVANN 253
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 63.5 bits (153), Expect = 5e-10 Identities = 50/142 (35%), Positives = 63/142 (44%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ P Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GP------- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 LG DP YPGG F+PLG NGRLAM + G +QA Sbjct: 184 -------LGEVTDPIYPGGS-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSMFGFFVQA 234 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPV NN Sbjct: 235 IVTGKGPLENLNDHLADPVANN 256
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 63.2 bits (152), Expect = 6e-10 Identities = 35/75 (46%), Positives = 41/75 (54%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PL NGRLAM + G +QAI TG GP Sbjct: 161 LGEVTDPIYPGGS-FDPLALADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 218 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL++PVNNN Sbjct: 219 LENLADHLAEPVNNN 233
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 62.8 bits (151), Expect = 8e-10 Identities = 50/142 (35%), Positives = 65/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 15 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRV----GGGPLGE-- 68 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPG F+PLG NGRLAM + G +QA Sbjct: 69 --GL--------DPLYPGDA-FDPLGLADDPEAKAELKVKEIK-NGRLAMFSMFGFFVQA 116 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPV NN Sbjct: 117 IVTGKGPIENLYDHLADPVANN 138
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 62.8 bits (151), Expect = 8e-10 Identities = 46/144 (31%), Positives = 61/144 (42%), Gaps = 5/144 (3%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 T + W AG + Y P TL E+ +IG+ E +R + Sbjct: 161 TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE----------- 209 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 L EK L YPGG F+PLG + RLAM+AFLG ++QA Sbjct: 210 -LDSEKRL-------YPGGKFFDPLGLAADPEKTAQLQLAEIK-HARLAMVAFLGFAVQA 260 Query: 255 IFTGVGPFQNLLDHLSDPVNNNIL 184 TG GP N HLSDP++ I+ Sbjct: 261 AATGKGPLNNWATHLSDPLHTTII 284
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 62.4 bits (150), Expect = 1e-09 Identities = 56/150 (37%), Positives = 68/150 (45%), Gaps = 10/150 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTL--------FVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y + + ++ L+G AE R N GS G Sbjct: 116 WFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRA----NGGSEG--- 168 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 FL D YPGGP F+PLG NGRLAM + LG +QA Sbjct: 169 FLD-------DLDTLYPGGP-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSCLGFFVQA 219 Query: 255 IFTGVGPFQNLLDHLSDP-VNNNILTSLKF 169 I TG GP QNL DHL+DP VN ++ KF Sbjct: 220 IVTGKGPVQNLTDHLADPTVNKAFASATKF 249
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 62.4 bits (150), Expect = 1e-09 Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P ++ ++ L+G E R+ G++G+ Sbjct: 131 WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRV----GGGTLGE-- 184 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP PGG F+PLG NGRLAM + G +QA Sbjct: 185 --GL--------DPLLPGGA-FDPLGLADDPEACAELKVKEIK-NGRLAMFSMFGFFVQA 232 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL+DPV NN Sbjct: 233 IVTGKGPIENLYDHLADPVANN 254
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 62.4 bits (150), Expect = 1e-09 Identities = 51/142 (35%), Positives = 64/142 (45%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTL--------FVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P + ++ L+G E R+ N G G+ Sbjct: 139 WFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRV----NGGPAGE-- 192 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPG F+PLG NGRLAM A LG +QA Sbjct: 193 --GL--------DPLYPG-EAFDPLGLADDPDTFAELKVKEIK-NGRLAMFACLGFFVQA 240 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DHL++P NN Sbjct: 241 IVTGKGPIENLTDHLANPAENN 262
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 62.0 bits (149), Expect = 1e-09 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG + D YPGG F+PL T NGRLAM + G +QAI TG GP Sbjct: 40 LGEAEDLLYPGGS-FDPLASLTDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 97 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DPVNNN Sbjct: 98 LENLADHLADPVNNN 112
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 61.6 bits (148), Expect = 2e-09 Identities = 35/75 (46%), Positives = 40/75 (53%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVEDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 234 FQNLLDHLSDPVNNN 190 +NL DHL+DP NN Sbjct: 239 IENLSDHLADPAVNN 253
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 61.2 bits (147), Expect = 2e-09 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 5/144 (3%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 T + W AG + Y P TL E+ +IG+ E +R + Sbjct: 158 TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE----------- 206 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 L EK L YPGG F+PLG + + RLAM+ FLG ++QA Sbjct: 207 -LDSEKRL-------YPGGKFFDPLGLASDPVKKAQLQLAEIK-HARLAMVGFLGFAVQA 257 Query: 255 IFTGVGPFQNLLDHLSDPVNNNIL 184 TG GP N HLSDP++ I+ Sbjct: 258 AATGKGPLNNWATHLSDPLHTTII 281
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 60.8 bits (146), Expect = 3e-09 Identities = 51/142 (35%), Positives = 62/142 (43%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTL--------FVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y P + ++ L+G E R+ N G G+ Sbjct: 121 WFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRV----NGGPAGE-- 174 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPG F+PLG NGRLAM + G +QA Sbjct: 175 --GL--------DPLYPGES-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSCFGFFVQA 222 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP QNL DHL+DP NN Sbjct: 223 IVTGKGPIQNLADHLADPGTNN 244
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 60.8 bits (146), Expect = 3e-09 Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AG+ I G Y +P ++ ++ L+G E R+ G +G+ Sbjct: 130 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRV----GGGPLGE-- 183 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL+K YPGG F+PLG NGRLAM + G +QA Sbjct: 184 --GLDKI--------YPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQA 231 Query: 255 IFTGVGPFQNLLDHLSDPVNNN 190 I TG GP +NL DH++DPV NN Sbjct: 232 IVTGKGPIENLFDHVADPVANN 253
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 56.2 bits (134), Expect = 7e-08 Identities = 47/139 (33%), Positives = 60/139 (43%), Gaps = 7/139 (5%) Frame = -3 Query: 582 QAGAIPPAGTYQYWADPY------TLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLE 421 Q A P G Y P T+ E I F EH+R SM K Sbjct: 117 QEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKD------ 162 Query: 420 KYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQ-AIFTG 244 S YPGG F+PLG+ + KNGRLA+LA +G +Q + + G Sbjct: 163 -----SEKKKYPGGA-FDPLGY-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215 Query: 243 VGPFQNLLDHLSDPVNNNI 187 GP +NL HL+DP +NNI Sbjct: 216 TGPLENLATHLADPWHNNI 234
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 55.8 bits (133), Expect = 1e-07 Identities = 35/75 (46%), Positives = 39/75 (52%) Frame = -3 Query: 399 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLL 220 D YPGGP F+PLG NGRLAM LG QAI TG GP +N L Sbjct: 43 DRLYPGGP-FDPLGLADDPDTFPELKVKEIK-NGRLAMSGMLGFYAQAIVTGEGPVENWL 100 Query: 219 DHLSDPVNNNILTSL 175 HL DP +N LT+L Sbjct: 101 YHLQDPSAHNGLTAL 115
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 55.5 bits (132), Expect = 1e-07 Identities = 52/150 (34%), Positives = 66/150 (44%), Gaps = 10/150 (6%) Frame = -3 Query: 588 WFQAGA-IPPAGTYQYWADPYTLFV--------FEMALIGFAEHRRLQDWYNPGSMGKQY 436 WF+AGA I G Y +P + ++ L+G E R+ N G G+ Sbjct: 118 WFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRV----NGGPAGE-- 171 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 GL DP YPG F+PLG NGRLA + G +QA Sbjct: 172 --GL--------DPLYPGES-FDPLGLADDPDTFAELKVKEIK-NGRLASFSMFGFFVQA 219 Query: 255 IFTGVGPFQNLLDHLSDP-VNNNILTSLKF 169 I TG GP QNL DHL++P VNN + KF Sbjct: 220 IVTGKGPVQNLDDHLANPTVNNAFAFATKF 249
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/78 (38%), Positives = 39/78 (50%) Frame = -3 Query: 408 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQ 229 G+ D +YPG F+PL T NGRLAM LG++ Q + TG P Sbjct: 263 GTADRSYPG---FDPLKLTTDYTKREIK-------NGRLAMTGLLGLTFQYLATGESPLA 312 Query: 228 NLLDHLSDPVNNNILTSL 175 NL H ++PV NI T+L Sbjct: 313 NLAAHFANPVGANITTTL 330 Score = 47.8 bits (112), Expect = 3e-05 Identities = 37/114 (32%), Positives = 48/114 (42%) Frame = -3 Query: 516 FEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXX 337 + ALI L+ W G G G EKY D +YPG F+P T Sbjct: 46 YRFALISLQVVAPLEYWRGNGGFGWD---GEEKY-----DRSYPG---FDPCNLTTEYTK 94 Query: 336 XXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 175 NGRLAM+ G+ +Q T GP NL++HL P+ NI +L Sbjct: 95 AAEIK------NGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANIGANL 142
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 49.7 bits (117), Expect = 7e-06 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPY---TLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFL 430 T IPWF+AGA P A P+ TL ++ L+G+ E +R D+++P S ++ Sbjct: 126 TGIPWFEAGADPGA------VAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWAT 179 Query: 429 G----LEKYLGGSGDPAYPGGPIFNPL 361 E + +G+ YPGG F+PL Sbjct: 180 PWSRTAENFSNSTGEQGYPGGKFFDPL 206
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/138 (29%), Positives = 56/138 (40%) Frame = -3 Query: 588 WFQAGAIPPAGTYQYWADPYTLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLG 409 WF+AG D L MA+ E+ R Q +N + Sbjct: 254 WFEAGDS---------VDGLKLGFITMAIAAPTEYWRGQGGFN--------------WQK 290 Query: 408 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQ 229 G D +YPG F+PL T NGRLA+ A G++ Q + TG P Sbjct: 291 GELDRSYPG---FDPLNLTTDYTRAAEVK------NGRLALTAVAGLTAQYLATGESPLA 341 Query: 228 NLLDHLSDPVNNNILTSL 175 NL HL++P+ NI T+L Sbjct: 342 NLSAHLANPIGANITTNL 359 Score = 42.7 bits (99), Expect = 8e-04 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -3 Query: 405 SGDPA--YPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPF 232 + DP YPG F+PL T NGRLA+ A LG +Q G P Sbjct: 102 NSDPTTIYPG---FDPLNLTTDYTKEAEIK------NGRLALTALLGFEVQRHVVGGSPL 152 Query: 231 QNLLDHLSDPVNNNILTSL 175 NL +HL P+ NI S+ Sbjct: 153 ANLAEHLQQPLQRNIADSI 171 Score = 35.8 bits (81), Expect = 0.10 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = -3 Query: 399 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLL 220 D +YPG F+PL T NGRLAM G+ +Q+ TG P NL+ Sbjct: 479 DQSYPG---FDPLNLTTEYTKEAEIK------NGRLAMNGMFGLEVQSHVTGKSPINNLI 529 Query: 219 D 217 D Sbjct: 530 D 530
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 47.0 bits (110), Expect = 4e-05 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPY---TLFVFEMALIGFAEHRRLQDWYNPGSMGKQYFL 430 + IPWF+AGA P A P+ TL ++ L+G+ E +R D+++P S ++ Sbjct: 121 SGIPWFEAGADPGA------IAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWAT 174 Query: 429 G----LEKYLGGSGDPAYPGGPIFNPL 361 E + +G+ YPGG F+PL Sbjct: 175 PWSKTAENFANFTGEQGYPGGKFFDPL 201
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 46.6 bits (109), Expect = 6e-05 Identities = 30/80 (37%), Positives = 38/80 (47%) Frame = -3 Query: 414 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGP 235 LG DP YPG F+ LG NGRLAM + G +QAI + Sbjct: 185 LGEVTDPLYPGS--FDSLGLAEDTEAFAELKVKELK-NGRLAMFSMFGFFVQAIVSRKDR 241 Query: 234 FQNLLDHLSDPVNNNILTSL 175 +NL DHL VNNN L+++ Sbjct: 242 LENLADHLGWTVNNNALSNV 261
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 42.0 bits (97), Expect = 0.001 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPY-----TLFVFEMALIGFAEHRRLQDWYNPGSMGKQY 436 T I W AG + Y P TL E+ ++G+ E +R + Sbjct: 162 TGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSE----------- 210 Query: 435 FLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQA 256 L EK + YPGG F+PLG + RLAM+AFL +LQA Sbjct: 211 -LDPEKRI-------YPGG-YFDPLGLAADPEKLDTLKLAEIK-HSRLAMVAFLIFALQA 260 Query: 255 IFTGVGP 235 FTG GP Sbjct: 261 AFTGKGP 267
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 40.8 bits (94), Expect = 0.003 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Frame = -3 Query: 600 TAIPWFQAGAIPPAGTYQYWADPYT---LFVFEMALIGFAEHRRLQDWYNPGSMGKQYFL 430 + IPWF+AGA P A P++ L ++ L+G+ E +R D+++ S + Sbjct: 121 SGIPWFEAGADPGA------IAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWAT 174 Query: 429 G----LEKYLGGSGDPAYPGGPIFNPL 361 E + +G+ YPGG F+PL Sbjct: 175 PWSKTAENFANFTGEQGYPGGKFFDPL 201
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 40.4 bits (93), Expect = 0.004 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 4/140 (2%) Frame = -3 Query: 600 TAIPWFQAGAIPPAG-TYQYWADPYT---LFVFEMALIGFAEHRRLQDWYNPGSMGKQYF 433 T + W +AG + G +Y + P++ L E+ L+G AE R + NP Sbjct: 157 TGVSWVEAGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSET-NPEKR----- 210 Query: 432 LGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAI 253 YPGG +F+PL + K+ RLAM++F G +QA+ Sbjct: 211 -------------CYPGG-VFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQAL 256 Query: 252 FTGVGPFQNLLDHLSDPVNN 193 TG G +L +D +NN Sbjct: 257 STGEGALGSLA-KFADGLNN 275
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 31.6 bits (70), Expect = 1.9 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 10/46 (21%) Frame = -3 Query: 456 GSMGKQYFLGLEKY---LGGSGDPAYPGGPIF-------NPLGFGT 349 GS G+Q G Y GG+G+P YPG P F PLG GT Sbjct: 321 GSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGT 366
>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor| (Cytochrome c-1) Length = 325 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Frame = +3 Query: 456 PGCTSPGAAGALRSRSVPSRTRRA----CRGRPSTGR 554 PG ++PG G RSR +P RT +A + PS GR Sbjct: 21 PGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGR 57
>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)| (Lysyl endopeptidase) Length = 653 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = -3 Query: 498 GFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 367 G A RL DW +P S G Q+ GL+ G G P P P+ N Sbjct: 442 GGAAASRLSDWLDPASTGAQFIDGLD---SGGGTPNTP--PVAN 480
>CILP2_HUMAN (Q8IUL8) Cartilage intermediate layer protein 2 precursor (CILP-2)| [Contains: Cartilage intermediate layer protein 2 C1; Cartilage intermediate layer protein 2 C2] Length = 1156 Score = 30.4 bits (67), Expect = 4.3 Identities = 15/32 (46%), Positives = 15/32 (46%) Frame = +3 Query: 447 PWNPGCTSPGAAGALRSRSVPSRTRRACRGRP 542 PW P S G LR R PS AC GRP Sbjct: 154 PWGPCSGSCGPGRRLRRRHCPSPAGDACPGRP 185
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 7.4 Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Frame = -3 Query: 501 IGFAEHRRLQ-DWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXX 325 IG AE R+ W P G F L+ D G F+PLG Sbjct: 151 IGLAESYRVSLGWATPTGTG---FNNLK-------DEYDLGNLYFDPLGLKPEDPEELRE 200 Query: 324 XXXXXXKNGRLAMLAFLGMSLQAIF-TGVGPFQNL 223 NGRLAM+A G LQ + GV FQ+L Sbjct: 201 LQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQHL 235
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 29.3 bits (64), Expect = 9.7 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 459 PGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 367 PGS G + F+G G G+P PG P F+ Sbjct: 1032 PGSTGLRGFIGFPGLPGDQGEPGSPGPPGFS 1062 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,005,401 Number of Sequences: 219361 Number of extensions: 1478514 Number of successful extensions: 5164 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 4394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5096 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
