Clone Information

BLAST Search Result

Clone Name	rbasd17o21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos...	91	2e-23
2	MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos...	88	7e-22
3	MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos...	85	2e-20
4	MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos...	84	3e-16
5	YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i...	61	1e-15
6	MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos...	69	1e-11
7	PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi...	37	0.065
8	PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a...	36	0.085
9	PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi...	35	0.14
10	SAP49_SCHPO (O14102) Spliceosome-associated protein 49	35	0.25
11	RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co...	35	0.25
12	RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He...	35	0.25
13	PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi...	34	0.42
14	PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind...	34	0.42
15	PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.42
16	PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.42
17	PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.42
18	RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin...	33	0.94
19	PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-...	33	0.94
20	RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho...	27	1.1
21	RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa...	32	1.2
22	PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 ...	32	1.6
23	PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi...	32	1.6
24	GAR2_SCHPO (P41891) Protein gar2	32	2.1
25	CYAA_BACAN (P40136) Calmodulin-sensitive adenylate cyclase precu...	32	2.1
26	RBM15_HUMAN (Q96T37) Putative RNA-binding protein 15 (RNA-bindin...	32	2.1
27	PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-...	32	2.1
28	LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2...	32	2.1
29	MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote...	32	2.1
30	NUCL_CHICK (P15771) Nucleolin (Protein C23)	31	3.6
31	MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote...	31	3.6
32	YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 i...	31	3.6
33	PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi...	30	4.6
34	SYV_CHLAB (Q5L5J6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	4.6
35	PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g...	30	4.6
36	PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6...	30	4.6
37	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	30	6.1
38	PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	6.1
39	PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	6.1
40	ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimu...	30	6.1
41	HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn...	30	6.1
42	CORA_HBVWO (P17392) Core antigen	30	6.1
43	CORA_HBVWI (P69707) Core antigen	30	6.1
44	CORA_HBVDR (P69708) Core antigen	30	6.1
45	CORA_HBVD4 (P69706) Core antigen	30	6.1
46	DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso...	30	6.1
47	FEMA_STAAW (P0A0A4) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
48	FEMA_STAAU (P0A0A5) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
49	FEMA_STAAS (Q6G9I5) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
50	FEMA_STAAR (Q6GH31) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
51	FEMA_STAAN (Q7A5R3) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
52	FEMA_STAAM (Q99UA7) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
53	FEMA_STAAC (Q5HG45) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
54	FEMA_STAAB (Q2YXZ5) Aminoacyltransferase femA (EC 2.3.2.-) (Fact...	30	7.9
55	PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 ...	30	7.9
56	LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2...	30	7.9
57	DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso...	30	7.9
58	DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso...	30	7.9
59	DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso...	30	7.9

>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 91.3 bits (225), Expect(2) = 2e-23
 Identities = 54/126 (42%), Positives = 75/126 (59%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           KTG SK YGF+EFE  EVAKIVA+ MNNYL+ E  ++   +P EKVH KL+ G   GF  
Sbjct: 81  KTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKK 140

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKRIKAAGIDYECPALIGSVQPSAKK 188
               A+   R +K  T ++ K++   ++ ++ K RKR+ A GIDY+ P    + Q  AKK
Sbjct: 141 PKYPAV--TRYNKTHTEDDVKKVGTKLLSKESKLRKRLAAKGIDYDFPGF--AAQIPAKK 196

Query: 187 IKFDEN 170
              + N
Sbjct: 197 APSEAN 202



 Score = 37.4 bits (85), Expect(2) = 2e-23
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = -2

Query: 632 PHGFYEDQMQGFFQQFGAVKRVRIARNRK 546
           P G +E Q++ +F+QFG V R+R++R++K
Sbjct: 53  PRGLFEPQLKSYFEQFGKVLRLRVSRSKK 81

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>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 88.2 bits (217), Expect(2) = 7e-22
 Identities = 48/108 (44%), Positives = 66/108 (61%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           KTG SK Y ++EFE  EVAKIVAD MNNYL  E  L+   VP EKVH +L+ G    F  
Sbjct: 77  KTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRK 136

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKRIKAAGIDYECP 224
             + A+   R +K ++  E K+M + ++ ++ K RKR+   GIDY+ P
Sbjct: 137 PTKPAV--SRYNKRRSEAEQKKMTQRMLSKENKVRKRLAEKGIDYDFP 182



 Score = 35.4 bits (80), Expect(2) = 7e-22
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -2

Query: 632 PHGFYEDQMQGFFQQFGAVKRVRIARNRK 546
           P   YE Q++ +F QFG V R+R++R++K
Sbjct: 49  PRALYEPQLREYFSQFGTVTRLRLSRSKK 77

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>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 85.1 bits (209), Expect(2) = 2e-20
 Identities = 47/108 (43%), Positives = 65/108 (60%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           KTG SK Y ++E+E  EVAKIVAD MNNYL  E  L+   V  EKVH +L+ G    F  
Sbjct: 77  KTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRK 136

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKRIKAAGIDYECP 224
             + A+ R    ++K  EE K+M + ++ ++ K RKR+   GIDY+ P
Sbjct: 137 PTKPAVTRYNSKRNK--EEVKKMTQRMISKEYKLRKRLAEKGIDYDFP 182



 Score = 33.5 bits (75), Expect(2) = 2e-20
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 632 PHGFYEDQMQGFFQQFGAVKRVRIARNRK 546
           P    E Q+Q +F QFG V R+R++R++K
Sbjct: 49  PKSLIEPQLQEYFNQFGTVTRLRLSRSKK 77

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>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 46/111 (41%), Positives = 69/111 (62%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           +TG SK Y F+EFE+ +VAKIVA+ MNNYL  E  L+   +P EKVH +L+K     F  
Sbjct: 81  RTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQ 140

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKRIKAAGIDYECPALI 215
               ++  KR ++++T+ +  RM E   K++   RK++   GIDY+ P+LI
Sbjct: 141 PSYPSV--KRYNRNRTLTQKLRMEERFKKKERLLRKKLAKKGIDYDFPSLI 189

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>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 60.8 bits (146), Expect(2) = 1e-15
 Identities = 33/89 (37%), Positives = 51/89 (57%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           KTG S+HYGF+EF N E A I  + MNNYLL  H LQ+  +P      KL+K  ++  V 
Sbjct: 127 KTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLPKGAKIEKLYKYKKR--VL 184

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVK 281
           V++   +  +  KD   ++H+  ++ + K
Sbjct: 185 VEKGITKPVKQLKDNMKQKHEERIKKLAK 213



 Score = 42.0 bits (97), Expect(2) = 1e-15
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -2

Query: 632 PHGFYEDQMQGFFQQFGAVKRVRIARNRK 546
           PHGF+E ++  +F QFG +K VR+ARN+K
Sbjct: 99  PHGFHEKELSKYFAQFGDLKEVRLARNKK 127

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>MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (mNIFK)
          Length = 317

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 41/111 (36%), Positives = 63/111 (56%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           +TG SK Y F+EFE+ +VAKIVA+ M+NYL  E  L    +P +KVH  L+      F  
Sbjct: 83  RTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPRKKVHKDLFSQRNALFHR 142

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKRIKAAGIDYECPALI 215
               A+  KR ++ +   +  +M     K+++  RK++ A GIDY  P+L+
Sbjct: 143 PSFPAV--KRYNRKRGHLQMLKMEYRFKKKEKLLRKKLAAKGIDYSFPSLV 191

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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVD 362
           G+SK YGF++FE  E A+   D++N  LL +  + +      +  A+   G    F  V 
Sbjct: 169 GRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNV- 227

Query: 361 RVAIERKRLSKDKTVEEHKR 302
                 K L K+ T +E K+
Sbjct: 228 ----YVKNLPKEITDDELKK 243



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           ++G S+ +GF+ F +PE A +  ++MN   L E  L +     +       + +R+ F  
Sbjct: 260 QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDRE---EELRRKF-- 314

Query: 367 VDRVAIERKRLSKDKTVEEHKRMLEGI--VKRDEKCRKRIKAAGIDYECPALIGS 209
                 E++R+S+ + ++     L+ +     DEK ++     G    C  ++ S
Sbjct: 315 ------EQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS 363



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G S+ +GF+ + NPE A +   EMN  ++    L +A
Sbjct: 365 GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 401

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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAP 428
           T + GKSK +GF+ FE    AK   D +N  LL    + +AP
Sbjct: 158 TDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAP 199

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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -3

Query: 544 TGKSKHYGFIEFENPEVAKIVADEMNNYLL 455
           TG+SK YGF++FE  E A+   D++N  L+
Sbjct: 172 TGRSKGYGFVQFEKEESAQAAIDKLNGMLM 201



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G S+ +GF+ + NPE A     EMN  ++    L IA
Sbjct: 369 GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIA 405

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>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVP 368
           + G+SK YGF+ +++ E A    + MNN  L        P+ +     +  KG R G + 
Sbjct: 135 ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMN-----KPITVSYAFKREGKGERHGDIA 189

Query: 367 VDRVAIERKR 338
             ++A   K+
Sbjct: 190 ERKLAAAAKK 199

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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 550 AKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPV 425
           ++TG+SK YGFI F + E AK   +++N + L    +++  V
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHV 326

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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 550 AKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPV 425
           ++TG+SK YGFI F + E AK   +++N + L    +++  V
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHV 326

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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T ++GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366

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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T ++GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   ++MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLL 163

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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T ++GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   ++MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLL 163

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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T ++GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   ++MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLL 163

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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T ++GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDESGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   ++MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIEKMNGMLL 163

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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 544 TGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPV 425
           TG+SK YGFI F + E A+   +++N + L    +++  V
Sbjct: 300 TGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV 339

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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMN 467
           T   GKSK +GF+ FE  E A+   DEMN
Sbjct: 224 TDDNGKSKGFGFVSFERHEDAQKAVDEMN 252



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   D+MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIDKMNGMLL 163



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366

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>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 26.9 bits (58), Expect(2) = 1.1
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = -2

Query: 632 PHGFYEDQMQGFFQQFGAVKRVRIARNRKDRK 537
           P+   E ++Q +F +FG ++++RI +++  +K
Sbjct: 115 PYDLDEIELQKYFVKFGEIEKIRIVKDKITQK 146



 Score = 24.3 bits (51), Expect(2) = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 544 TGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEK 413
           T KSK Y FI F++P  +K+   E+  +   +   +I  V +E+
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIER 187

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>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           +T KS+ + FI FENP  AK  A +MN   L    +++
Sbjct: 43  RTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKV 80

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>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWK-------- 392
           +TG S  Y FIEFEN +  +    +M   L+ +H + +         ++ W+        
Sbjct: 284 RTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRS 343

Query: 391 GVRKGFVPVDRVAIERKRLSKDKTVEEHKRMLEGIVKRDEKCRKR 257
           G R GF  V  +  +R+  + D   E+         K D+  R+R
Sbjct: 344 GQRGGFGGVASLEKKRQYRASDNAREKENDYTLVFDKGDKAPRRR 388

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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           T + GKSK +GF+ +  PE A     EMN  +L    L +A
Sbjct: 397 TDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVA 437

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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAK 488
           ++G+SK YG+++FE PE AK
Sbjct: 299 QSGRSKGYGYVDFETPEAAK 318

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>CYAA_BACAN (P40136) Calmodulin-sensitive adenylate cyclase precursor (EC|
           4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
           (Edema factor) (EF) (Anthrax edema toxin adenylate
           cyclase component)
          Length = 800

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
 Frame = -3

Query: 508 ENPEVAKIVADEMNNYLLFEHTLQIAPVPLE--------KVHAKL--WKGVRKGFVPVD- 362
           E+ +  K +A E+N Y+LF    ++A   ++         VH K   W G   G++P D 
Sbjct: 310 EHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDW-GPVAGYIPFDQ 368

Query: 361 --------RVAIERKRLSKDKTVEEHKRMLEGI-VKRDEKCRKRIKAAGI 239
                   ++A+E+  L   K++ EH+  +  I +K D    + +K  GI
Sbjct: 369 DLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRIEELKENGI 418

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>RBM15_HUMAN (Q96T37) Putative RNA-binding protein 15 (RNA-binding motif protein|
           15) (One-twenty two protein)
          Length = 977

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/79 (24%), Positives = 39/79 (49%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVD 362
           G++  YGF++FEN +++      M+  ++  + ++I          +LW G    +VP+ 
Sbjct: 411 GQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPT-TRLWVGGLGPWVPLA 469

Query: 361 RVAIERKRLSKDKTVEEHK 305
            +A E  R    +T++  K
Sbjct: 470 ALAREFDRFGTIRTIDYRK 488

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>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 535 SKHYGFIEFENPEVAKIVADEMNNYLL 455
           SK YGF+ FE  E A+   D+MN  LL
Sbjct: 137 SKGYGFVHFETQEAAERAIDKMNGMLL 163



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVA 366



 Score = 29.6 bits (65), Expect = 7.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMN 467
           GKS+ +GF+ FE  E A+   D+MN
Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDDMN 252

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>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
            tumor suppressor homolog 1) (WARTS protein kinase)
          Length = 1129

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 212  PDKGWTLVIDTSSLDSFPTLLIPLYNSFKHPFVLFYCFILAKPLPFNCYPVNWYKSLPHT 391
            PDK W+   D S  ++    L   Y + KHP   FY F   +    N YP N+ K + + 
Sbjct: 1043 PDKLWS---DGSEEENISDTLSGWYKNGKHPEHAFYEFTFRRFFDDNGYPYNYPKPIEYE 1099

Query: 392  F 394
            +
Sbjct: 1100 Y 1100

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>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -3

Query: 559 PGTAKTGK--SKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           P +   GK  S  +GF+EF + E A+I    M+ ++L  H LQ+
Sbjct: 640 PDSKNKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQL 683

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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 544 TGKSKHYGFIEFENPEVAKIVADEMNN 464
           TG SK +GF++F +PE AK   + M +
Sbjct: 587 TGSSKGFGFVDFSSPEDAKAAKEAMED 613

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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVH 407
           +TG+SK + ++ F++PE A     E++  +     L I P   +K H
Sbjct: 337 RTGQSKGFAYVLFKDPEHAANAYIELDKQIFQGRLLHILPADAKKTH 383

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>YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 in chromosome I|
          Length = 576

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 23/83 (27%), Positives = 35/83 (42%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVD 362
           G  +   F  F +PE AK V   +N Y +    L++            WK   +   P +
Sbjct: 270 GVFRGLAFANFHSPEEAKTVVQVLNGYEITGRRLRVE-----------WK---RQLPPAE 315

Query: 361 RVAIERKRLSKDKTVEEHKRMLE 293
           R  +ER +  K + VEE K  L+
Sbjct: 316 RERVERGKQEK-RAVEERKNQLK 337

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>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIA 431
           G+SK +GF+ F +PE A     EMN  ++    L +A
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVA 366

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>SYV_CHLAB (Q5L5J6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 940

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
 Frame = -3

Query: 394 KGVRKG-FVPVDRVAIERKRLSKDKT-----VEEHKRML 296
           +G+R G FVPV+ +A E+ RL K+KT     +E   R+L
Sbjct: 863 EGIRLGVFVPVEHIAKEKTRLEKEKTRLENAIESASRLL 901

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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           T + GKS+ YGF++FE  + A      +N+ ++ +  + +
Sbjct: 145 TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYV 184

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>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly|
           U-binding splicing factor) (Protein half pint) (PUF60
           homolog)
          Length = 637

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 544 TGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           T K K + F+E+E PE A++  ++MN  L+    +++
Sbjct: 167 TQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 203

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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           +TG+S+ +GF+ F++ +  K   DEMN   L   T+ +
Sbjct: 42  ETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITV 79

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>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4)
          Length = 492

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKL-WKG 389
           KTG+S  Y FIEFE  E  +    +M+N L+ +  +    V   +  AK+ WKG
Sbjct: 276 KTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIH---VDFSQSVAKVKWKG 326

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>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4)
          Length = 492

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKL-WKG 389
           KTG+S  Y FIEFE  E  +    +M+N L+ +  +    V   +  AK+ WKG
Sbjct: 276 KTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIH---VDFSQSVAKVKWKG 326

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>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 595

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 21/86 (24%), Positives = 42/86 (48%)
 Frame = -3

Query: 541 GKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVD 362
           G ++ Y F+ F N + AK    ++NNY +   T ++  V     + +L+    +G +P  
Sbjct: 93  GNNRGYAFVTFSNKQEAKNAIKQLNNYEI--RTGRLLGVCASVDNCRLF----RGGIP-- 144

Query: 361 RVAIERKRLSKDKTVEEHKRMLEGIV 284
                 K   +++ + E K++ EG+V
Sbjct: 145 ------KTKKREEILSEMKKVTEGVV 164

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>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMN 467
           +T KS+ + F+ FE+P  AK VA +MN
Sbjct: 44  ETNKSRGFAFVTFESPADAKDVARDMN 70

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>CORA_HBVWO (P17392) Core antigen|
          Length = 183

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 407 MNFLQWDRRNLQSVLKQEVVIHLISYNLGHLGVLKLNESIMLGLSCL 547
           MN   W   NL+    +E+V+  ++ N+G    LK+ + +   +SCL
Sbjct: 66  MNLATWVGSNLEDPASRELVVSYVNVNMG----LKIRQLLWFHISCL 108

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>CORA_HBVWI (P69707) Core antigen|
          Length = 183

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 407 MNFLQWDRRNLQSVLKQEVVIHLISYNLGHLGVLKLNESIMLGLSCL 547
           MN   W   NL+    +E+V+  ++ N+G    LK+ + +   +SCL
Sbjct: 66  MNLATWVGSNLEDPASRELVVSYVNVNMG----LKIRQLLWFHISCL 108

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>CORA_HBVDR (P69708) Core antigen|
          Length = 183

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 407 MNFLQWDRRNLQSVLKQEVVIHLISYNLGHLGVLKLNESIMLGLSCL 547
           MN   W   NL+    +E+V+  ++ N+G    LK+ + +   +SCL
Sbjct: 66  MNLATWVGSNLEDPASRELVVSYVNVNMG----LKIRQLLWFHISCL 108

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>CORA_HBVD4 (P69706) Core antigen|
          Length = 183

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 407 MNFLQWDRRNLQSVLKQEVVIHLISYNLGHLGVLKLNESIMLGLSCL 547
           MN   W   NL+    +E+V+  ++ N+G    LK+ + +   +SCL
Sbjct: 66  MNLATWVGSNLEDPASRELVVSYVNVNMG----LKIRQLLWFHISCL 108

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>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENP-EVAKIVADEMN 467
           T +TG SK YGF+ F N  +V KIV  ++N
Sbjct: 73  TDRTGVSKGYGFVSFYNDVDVQKIVESQIN 102

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>FEMA_STAAW (P0A0A4) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAU (P0A0A5) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAS (Q6G9I5) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAR (Q6GH31) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAN (Q7A5R3) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAM (Q99UA7) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAC (Q5HG45) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>FEMA_STAAB (Q2YXZ5) Aminoacyltransferase femA (EC 2.3.2.-) (Factor essential|
           for expression of methicillin resistance A)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -3

Query: 478 DEMNNYLLFEHTLQIAPVPLEKVHAKLWKGVRKGFVPVDRVAIERKRLSKDKTVEEHKRM 299
           D+M+N L FEHT                 G  KGF PV ++        KDKT ++  + 
Sbjct: 133 DKMSN-LGFEHT-----------------GFHKGFDPVLQIRYHSVLDLKDKTADDIIKN 174

Query: 298 LEGIVKRDEKCRKRIKAAGI 239
           ++G+ KR+    K++K  G+
Sbjct: 175 MDGLRKRN---TKKVKKNGV 191

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>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 459

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 547 KTGKSKHYGFIEFENPEVAKIVADEMNNYLLFEHTLQI 434
           +TG S  Y FIEFEN +  +    +M   L+ +H + +
Sbjct: 284 RTGDSLQYAFIEFENQKDCEQAYFKMQGVLIDDHRIHV 321

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>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
            tumor suppressor homolog 1) (WARTS protein kinase)
            (h-warts)
          Length = 1130

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 212  PDKGWTLVIDTSSLDSFPTLLIPLYNSFKHPFVLFYCFILAKPLPFNCYPVNWYKSLPHT 391
            PDK W+   D +  ++    L   Y + KHP   FY F   +    N YP N+ K + + 
Sbjct: 1044 PDKLWS---DDNEEENVNDTLNGWYKNGKHPEHAFYEFTFRRFFDDNGYPYNYPKPIEYE 1100

Query: 392  F 394
            +
Sbjct: 1101 Y 1101

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>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENP-EVAKIVADEMN 467
           T +TG SK YGF+ F N  +V KIV  ++N
Sbjct: 73  TDRTGVSKGYGFVSFFNDVDVQKIVESQIN 102

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>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENP-EVAKIVADEMN 467
           T +TG SK YGF+ F N  +V KIV  ++N
Sbjct: 73  TDRTGVSKGYGFVSFFNDVDVQKIVESQIN 102

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>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 553 TAKTGKSKHYGFIEFENP-EVAKIVADEMN 467
           T +TG SK YGF+ F N  +V KIV  ++N
Sbjct: 73  TDRTGVSKGYGFVSFFNDVDVQKIVESQIN 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,100,131
Number of Sequences: 219361
Number of extensions: 1922338
Number of successful extensions: 5584
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5577
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result