Clone Information

BLAST Search Result

Clone Name	rbasd17o21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_482379.1\| Oryza sativa (japonica cultivar-group), mRNA	406	e-110
2	ref\|XM_507581.1\| PREDICTED Oryza sativa (japonica cultivar-group...	406	e-110
3	ref\|XM_507230.2\| PREDICTED Oryza sativa (japonica cultivar-group...	406	e-110
4	dbj\|AK104578.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	406	e-110
5	dbj\|AK099367.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	406	e-110
6	dbj\|AK059631.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	406	e-110
7	emb\|AJ575234.1\|OSA575234 Oryza sativa (japonica cultivar-group) ...	343	4e-91
8	gb\|AY106169.1\| Zea mays PCO082380 mRNA sequence	303	4e-79
9	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	105	2e-19
10	dbj\|AP005158.3\| Oryza sativa (japonica cultivar-group) genomic D...	105	2e-19
11	gb\|AF465933.1\| Elaeis oleifera RNA binding protein mRNA, complet...	70	1e-08
12	gb\|AC002457.2\| Homo sapiens BAC clone CTB-60P12 from 7, complete...	42	2.2
13	gb\|AC146054.3\| Pan troglodytes BAC clone RP43-78A13 from 7, comp...	42	2.2
14	gb\|AC152937.21\| Medicago truncatula clone mth2-96n6, complete se...	42	2.2
15	emb\|AL136167.8\| Human DNA sequence from clone RP1-299I16 on chro...	42	2.2
16	ref\|XM_785359.1\| PREDICTED: Strongylocentrotus purpuratus simila...	42	2.2
17	dbj\|AP008230.1\| Desulfitobacterium hafniense Y51 genomic DNA, co...	42	2.2
18	gb\|AE011821.1\| Xanthomonas axonopodis pv. citri str. 306, secti...	42	2.2
19	gb\|AY910577.1\| Homo sapiens ATP-binding cassette, sub-family B (...	42	2.2
20	gb\|CP000108.1\| Chlorobium chlorochromatii CaD3, complete genome	40	8.7
21	gb\|AC161798.6\| Mus musculus chromosome 7, clone RP23-267I20, com...	40	8.7
22	gb\|AE017343.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	8.7
23	gb\|BT015250.1\| Drosophila melanogaster LP19005 full insert cDNA	40	8.7
24	gb\|AC003999.2\| Homo sapiens PAC clone RP5-1139P1 from 7, complet...	40	8.7
25	gb\|AC132428.3\| Mus musculus BAC clone RP23-203K20 from chromosom...	40	8.7
26	ref\|XM_569763.1\| Cryptococcus neoformans var. neoformans JEC21 r...	40	8.7
27	gb\|AC105302.27\| Mus musculus strain C57BL/6J clone rp23-45h18 ma...	40	8.7
28	ref\|XM_776005.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.7
29	gb\|AC105021.6\| Homo sapiens chromosome 17, clone CTD-2033D24, co...	40	8.7
30	gb\|AC010024.5\| Drosophila melanogaster 3L BAC RP98-26E20 (Roswel...	40	8.7
31	gb\|AC113424.2\| Homo sapiens chromosome 5 clone RP11-624C4, compl...	40	8.7
32	gb\|AC113412.2\| Homo sapiens chromosome 5 clone RP11-509M23, comp...	40	8.7
33	ref\|NM_079998.2\| Drosophila melanogaster arrow CG5912-RA (arr), ...	40	8.7
34	gb\|AY042642.1\| Rhabdodendron macrophyllum maturase K (matK) gene...	40	8.7
35	gb\|AC069407.2\| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell...	40	8.7
36	gb\|AC074031.16\| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Ca...	40	8.7
37	gb\|AC016256.19\| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Canc...	40	8.7
38	emb\|BX005027.13\| Zebrafish DNA sequence from clone DKEY-4C2 in l...	40	8.7
39	gb\|AC090963.32\| Mus musculus strain C57BL/6J chromosome 17 clone...	40	8.7
40	gb\|AC090653.36\| Mus musculus strain C57BL/6J chromosome 17 clone...	40	8.7
41	gb\|AC009837.13\| Homo sapiens chromosome 17, clone RP11-550K23, c...	40	8.7
42	gb\|AF223365.1\|AF223365 Drosophila melanogaster LDL-related prote...	40	8.7
43	gb\|AC007452.1\|AC007452 Drosophila melanogaster, chromosome 2R, r...	40	8.7
44	gb\|AE003818.3\| Drosophila melanogaster chromosome 2R, section 32...	40	8.7
45	gb\|AE003562.3\| Drosophila melanogaster chromosome 3L, section 23...	40	8.7

>ref|XM_482379.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 977

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 764 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 705

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 704 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 645

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 644 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 585

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 584 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 525

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 524 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 465

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 464 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 405

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 404 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 346

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 345 gaaaccttgcatctgttcctcatagaacccatggggg 309

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>ref|XM_507581.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13
           mRNA
          Length = 983

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 770 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 711

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 710 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 651

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 650 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 591

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 590 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 531

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 530 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 471

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 470 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 411

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 410 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 352

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 351 gaaaccttgcatctgttcctcatagaacccatggggg 315

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>ref|XM_507230.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13
           mRNA
          Length = 1096

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 766 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 707

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 706 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 647

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 646 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 587

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 586 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 527

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 526 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 467

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 466 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 407

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 406 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 348

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 347 gaaaccttgcatctgttcctcatagaacccatggggg 311

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>dbj|AK104578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B02, full
           insert sequence
          Length = 977

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 764 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 705

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 704 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 645

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 644 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 585

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 584 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 525

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 524 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 465

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 464 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 405

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 404 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 346

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 345 gaaaccttgcatctgttcctcatagaacccatggggg 309

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>dbj|AK099367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M06, full
           insert sequence
          Length = 983

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 770 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 711

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 710 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 651

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 650 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 591

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 590 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 531

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 530 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 471

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 470 tctgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 411

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 410 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 352

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 351 gaaaccttgcatctgttcctcatagaacccatggggg 315

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>dbj|AK059631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A04, full
           insert sequence
          Length = 1096

 Score =  406 bits (205), Expect = e-110
 Identities = 395/457 (86%), Gaps = 1/457 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactcgtaa 236
           |||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 766 tcaaacttgatcttcttagctgaaggctgaacgctgccgataaggggtggacactcgtaa 707

                                                                       
Query: 237 tcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattccttca 296
           || || |||||||| ||||||||||| |||| |||||||||||| ||||| |||   |||
Sbjct: 706 tcaatcccagcagctttgattcttttgcgacgcttctcatcccgttttacgattttgtca 647

                                                                       
Query: 297 agcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaattgct 356
           | || | ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||
Sbjct: 646 accaactttttgtgctcttctattgttttatccttgttcagcctcctccgttcaattgct 587

                                                                       
Query: 357 acccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaactttc 416
           ||||| |||| ||||| ||| |||   | |||||||||||| | ||| | ||||| ||||
Sbjct: 586 acccgatcaattggtataaacccccgtcgcacacctttccacaattttggatgaattttc 527

                                                                       
Query: 417 tccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcatctca 476
           ||  |||| |||  ||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 526 tcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctca 467

                                                                       
Query: 477 tcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgcttggac 536
           || || |||||||| || ||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 466 tccgccacaatctttgctacctcagggttctcaaactcaatgaacccataatgcttggac 407

                                                                       
Query: 537 tttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaa 596
           ||||||||| |||||||| ||||||||||| | ||| |||||||  || || ||||| ||
Sbjct: 406 tttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaa 348

                                                
Query: 597 gaaaccttgcatctggtcctcgtagaagccgtggggg 633
           ||||||||||||||| ||||| ||||| || ||||||
Sbjct: 347 gaaaccttgcatctgttcctcatagaacccatggggg 311

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>emb|AJ575234.1|OSA575234 Oryza sativa (japonica cultivar-group) partial mRNA for TA8 protein
          Length = 590

 Score =  343 bits (173), Expect = 4e-91
 Identities = 351/409 (85%), Gaps = 1/409 (0%)
 Strand = Plus / Minus

                                                                       
Query: 225 ggacactcgtaatcgataccagcagccttgattcttttccgacacttctcatcccgcttt 284
           |||||||||||||| || |||||||| ||||||||||| |||| |||||||||||| |||
Sbjct: 590 ggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatcccgtttt 531

                                                                       
Query: 285 acaattccttcaagcatccttttgtgctcttctactgttttatccttgctaagcctcttc 344
           || |||   |||| || | ||||||||||||||| ||||||||||||| | |||||| ||
Sbjct: 530 acgattttgtcaaccaactttttgtgctcttctattgttttatccttgttcagcctcctc 471

                                                                       
Query: 345 cgttcaattgctacccggtcaactggtacaaatcccttcctcacacctttccatagtttg 404
           ||||||||||||||||| |||| ||||| ||| |||   | |||||||||||| | ||| 
Sbjct: 470 cgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttccacaatttt 411

                                                                       
Query: 405 gcatgaactttctccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtag 464
           | ||||| ||||||  |||| |||  ||||||||||| ||||||||||||||| ||||||
Sbjct: 410 ggatgaattttctcaggtggaacaatcgcaatttgcaaagtgtgctcaaacagcaggtag 351

                                                                       
Query: 465 ttattcatctcatcagctacaatcttggccacctcggggttctcaaactcaatgaatcca 524
           || ||||||||||| || |||||||| || ||||| |||||||||||||||||||| |||
Sbjct: 350 ttgttcatctcatctgccacaatctttgctacctcagggttctcaaactcaatgaaccca 291

                                                                       
Query: 525 taatgcttggactttcctgtctttgcggttccgggcaatcctgaccctcttaacagcccc 584
           ||||||||||||||||||||| |||||||| ||||||||||| | ||| |||||||  ||
Sbjct: 290 taatgcttggactttcctgtc-ttgcggtttcgggcaatcctcaaccttttaacagttcc 232

                                                            
Query: 585 gaactgctggaagaaaccttgcatctggtcctcgtagaagccgtggggg 633
            || ||||| ||||||||||||||||| ||||| ||||| || ||||||
Sbjct: 231 aaattgctgaaagaaaccttgcatctgttcctcatagaacccatggggg 183

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>gb|AY106169.1| Zea mays PCO082380 mRNA sequence
          Length = 1072

 Score =  303 bits (153), Expect = 4e-79
 Identities = 385/461 (83%), Gaps = 1/461 (0%)
 Strand = Plus / Minus

                                                                       
Query: 173 ctcatcaaactttatcttcttagcggaaggctgaacgctcccgataagggctggacactc 232
           |||||| ||||| ||||| || || || || |||| |||||| ||||| |||||||||||
Sbjct: 799 ctcatcgaacttgatctttttcgctgatggttgaatgctccctataagagctggacactc 740

                                                                       
Query: 233 gtaatcgataccagcagccttgattcttttccgacacttctcatcccgctttacaattcc 292
            || || |||||||| |||||||||||||| |||| |||  |||||||||||||||||||
Sbjct: 739 atagtcaataccagctgccttgattcttttgcgacgctttccatcccgctttacaattcc 680

                                                                       
Query: 293 ttcaagcatccttttgtgctcttctactgttttatccttgctaagcctcttccgttcaat 352
           ||||| |||| ||||||||||| |||| || ||||||||| |  | ||||||||||||||
Sbjct: 679 ttcaaccatctttttgtgctctgctacagtcttatccttgttgtgtctcttccgttcaat 620

                                                                       
Query: 353 tgctacccggtcaactggtacaaatcccttcctcacacctttccatagtttggcatgaac 412
           |||||| || ||||| |||| ||||||| | | ||| |||||||||| ||| | ||||||
Sbjct: 619 tgctactcgatcaacaggtataaatccccttcgcacccctttccataatttaggatgaac 560

                                                                       
Query: 413 tttctccagtgggacaggcgcaatttgcagagtgtgctcaaacaggaggtagttattcat 472
           ||||||  |    ||| | |||| |||||  ||| ||||||||| ||| |||||||||||
Sbjct: 559 tttctctggctcaacaagtgcaacttgcaaggtgcgctcaaacaagagatagttattcat 500

                                                                       
Query: 473 ctcatcagctacaatcttggccacctcggggttctcaaactcaatgaatccataatgctt 532
           |||||| ||||| | ||| |||||  | |||||||||||||||||||||||||| |||||
Sbjct: 499 ctcatctgctacgacctttgccacagcagggttctcaaactcaatgaatccatagtgctt 440

                                                                       
Query: 533 ggactttcctgtctttgcggttccgggcaatcctgaccctcttaacagccccgaactgct 592
           ||||||||||||| |||||||| || || ||||| | |||||||| | |||| |||||||
Sbjct: 439 ggactttcctgtc-ttgcggttacgagcgatcctaagcctcttaatatccccaaactgct 381

                                                    
Query: 593 ggaagaaaccttgcatctggtcctcgtagaagccgtggggg 633
             ||||| |||| ||||| |||||||||||| || ||||||
Sbjct: 380 taaagaaccctttcatctcgtcctcgtagaaaccatggggg 340

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  105 bits (53), Expect = 2e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                            
Query: 218      aagggctggacactcgtaatcgataccagcagccttgattcttttccgacacttctcatc 277
                ||||| ||||||||||||||| || |||||||| ||||||||||| |||| |||||||||
Sbjct: 19715319 aaggggtggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatc 19715378

                                                                     
Query: 278      ccgctttacaattccttcaagcatccttttgtgctcttctactgttttatcct 330
                ||| ||||| |||   |||| || | ||||||||||||||| |||||||||||
Sbjct: 19715379 ccgttttacgattttgtcaaccaactttttgtgctcttctattgttttatcct 19715431



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                    
Query: 495      acctcggggttctcaaactcaatgaatccataatgcttggactttcctgtct 546
                ||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 19716270 acctcagggttctcaaactcaatgaacccataatgcttggactttcctgtct 19716321



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                            
Query: 431      cgcaatttgcagagtgtgctcaaacaggaggtagttattcatctcatcagctacaatctt 490
                ||||||||||| ||||||||||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 19716113 cgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctcatctgccacaatctt 19716172



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 177      tcaaactttatcttcttagcggaaggctgaacgctcccgat 217
                |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 19714355 tcaaacttgatcttcttagctgaaggctgaacgctgccgat 19714395



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 336      agcctcttccgttcaattgctacccggtcaactggtacaaatcccttcctcacacctttc 395
                |||||| ||||||||||||||||||| |||| ||||| ||| |||   | ||||||||||
Sbjct: 19715510 agcctcctccgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttc 19715569

                  
Query: 396      ca 397
                ||
Sbjct: 19715570 ca 19715571



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                         
Query: 547      ttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaagaaacct 603
                |||||||| ||||||||||| | ||| |||||||  || || ||||| |||||||||
Sbjct: 19716392 ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaagaaacct 19716448

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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score =  105 bits (53), Expect = 2e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                         
Query: 218   aagggctggacactcgtaatcgataccagcagccttgattcttttccgacacttctcatc 277
             ||||| ||||||||||||||| || |||||||| ||||||||||| |||| |||||||||
Sbjct: 44270 aaggggtggacactcgtaatcaatcccagcagctttgattcttttgcgacgcttctcatc 44329

                                                                  
Query: 278   ccgctttacaattccttcaagcatccttttgtgctcttctactgttttatcct 330
             ||| ||||| |||   |||| || | ||||||||||||||| |||||||||||
Sbjct: 44330 ccgttttacgattttgtcaaccaactttttgtgctcttctattgttttatcct 44382



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 495   acctcggggttctcaaactcaatgaatccataatgcttggactttcctgtct 546
             ||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 45221 acctcagggttctcaaactcaatgaacccataatgcttggactttcctgtct 45272



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 431   cgcaatttgcagagtgtgctcaaacaggaggtagttattcatctcatcagctacaatctt 490
             ||||||||||| ||||||||||||||| |||||||| ||||||||||| || ||||||||
Sbjct: 45064 cgcaatttgcaaagtgtgctcaaacagcaggtagttgttcatctcatctgccacaatctt 45123



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 177   tcaaactttatcttcttagcggaaggctgaacgctcccgat 217
             |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 43306 tcaaacttgatcttcttagctgaaggctgaacgctgccgat 43346



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 336   agcctcttccgttcaattgctacccggtcaactggtacaaatcccttcctcacacctttc 395
             |||||| ||||||||||||||||||| |||| ||||| ||| |||   | ||||||||||
Sbjct: 44461 agcctcctccgttcaattgctacccgatcaattggtataaacccccgtcgcacacctttc 44520

               
Query: 396   ca 397
             ||
Sbjct: 44521 ca 44522



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 547   ttgcggttccgggcaatcctgaccctcttaacagccccgaactgctggaagaaacct 603
             |||||||| ||||||||||| | ||| |||||||  || || ||||| |||||||||
Sbjct: 45343 ttgcggtttcgggcaatcctcaaccttttaacagttccaaattgctgaaagaaacct 45399

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>gb|AF465933.1| Elaeis oleifera RNA binding protein mRNA, complete cds
          Length = 958

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 144/179 (80%), Gaps = 1/179 (0%)
 Strand = Plus / Minus

                                                                       
Query: 445 tgtgctcaaacaggaggtagttattcatctcatcagctacaatcttggccacctcggggt 504
           |||||||||| |  ||||| || ||||||||||| || |||| |||||||||||| ||||
Sbjct: 415 tgtgctcaaataataggtaattgttcatctcatcggccacaaccttggccacctcagggt 356

                                                                       
Query: 505 tctcaaactcaatgaatccataatgcttggactttcctgtctttgcggttccgggcaatc 564
           | ||||| ||||  |||||||| || || || || |||||| || | ||| || | ||||
Sbjct: 355 tttcaaattcaagaaatccatagtgttttgatttccctgtc-ttcctgttgcgtgaaatc 297

                                                                      
Query: 565 ctgaccctcttaacagccccgaactgctggaagaaaccttgcatctggtcctcgtagaa 623
           || | |||||| |    ||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 296 cttagcctcttgattttcccaaactgctggaagaatccttgcatttgctcctcgtagaa 238

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>gb|AC002457.2| Homo sapiens BAC clone CTB-60P12 from 7, complete sequence
          Length = 177380

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     agaagtaccaaatcacaatct 81
              |||||||||||||||||||||
Sbjct: 106607 agaagtaccaaatcacaatct 106587

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>gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, complete sequence
          Length = 155731

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     agaagtaccaaatcacaatct 81
              |||||||||||||||||||||
Sbjct: 123226 agaagtaccaaatcacaatct 123246

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>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence
          Length = 108802

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 451   caaacaggaggtagttattca 471
             |||||||||||||||||||||
Sbjct: 39989 caaacaggaggtagttattca 40009

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>emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chromosome Xq26.1-27.3
             Contains part of the GPR112 gene for G protein-coupled
             receptor 112, complete sequence
          Length = 63946

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 591   ctggaagaaaccttgcatctg 611
             |||||||||||||||||||||
Sbjct: 17311 ctggaagaaaccttgcatctg 17331

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>ref|XM_785359.1| PREDICTED: Strongylocentrotus purpuratus similar to U1-snRNP
           binding protein homolog (LOC585534), mRNA
          Length = 528

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 507 tcaaactcaatgaatccataatgcttgga 535
           ||||||||||||||| |||| ||||||||
Sbjct: 296 tcaaactcaatgaatgcatactgcttgga 268

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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 495     acctcggggttctcaaactca 515
               |||||||||||||||||||||
Sbjct: 5608276 acctcggggttctcaaactca 5608296

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>gb|AE011821.1| Xanthomonas axonopodis pv. citri str. 306,  section 199 of 469 of the
            complete genome
          Length = 10029

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 580  gccccgaactgctggaagaaa 600
            |||||||||||||||||||||
Sbjct: 7192 gccccgaactgctggaagaaa 7172

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>gb|AY910577.1| Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 1
             (ABCB1) gene, complete cds
          Length = 213010

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    agaagtaccaaatcacaatct 81
             |||||||||||||||||||||
Sbjct: 44240 agaagtaccaaatcacaatct 44260

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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 508     caaactcaatgaatccataa 527
               ||||||||||||||||||||
Sbjct: 2266759 caaactcaatgaatccataa 2266740

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>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    catcagtcattttttaaactaata 40
             |||||||||||||||||| |||||
Sbjct: 63153 catcagtcattttttaaaataata 63176

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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 229     actcgtaatcgataccagcagcct 252
               |||||||||||||||| |||||||
Sbjct: 1658722 actcgtaatcgataccggcagcct 1658745

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>gb|BT015250.1| Drosophila melanogaster LP19005 full insert cDNA
          Length = 6013

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ctccagtgggacaggcgcaa 435
            ||||||||||||||||||||
Sbjct: 1338 ctccagtgggacaggcgcaa 1319

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>gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complete sequence
          Length = 133457

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tcaaactttatcttcttagc 196
             ||||||||||||||||||||
Sbjct: 46848 tcaaactttatcttcttagc 46867

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>gb|AC132428.3| Mus musculus BAC clone RP23-203K20 from chromosome 7, complete sequence
          Length = 194926

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    catcagtcattttttaaactaata 40
             |||||||||||||||||| |||||
Sbjct: 41636 catcagtcattttttaaaataata 41613

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>ref|XM_569763.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal large subunit
            biogenesis-related protein (CNC05560) partial mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  actcgtaatcgataccagcagcct 252
            |||||||||||||||| |||||||
Sbjct: 1452 actcgtaatcgataccggcagcct 1429

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>gb|AC105302.27| Mus musculus strain C57BL/6J clone rp23-45h18 map 17, complete sequence
          Length = 238088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tgctttctctatagctaatt 172
             ||||||||||||||||||||
Sbjct: 36313 tgctttctctatagctaatt 36332

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>ref|XM_776005.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA binding
           motif protein 19 (LOC575617), mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 ttctcaaactcaatgaatccataa 527
           ||||||||||||||||| ||||||
Sbjct: 707 ttctcaaactcaatgaagccataa 684

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>gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, complete sequence
          Length = 143552

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    cttctactgttttatccttg 332
              ||||||||||||||||||||
Sbjct: 143220 cttctactgttttatccttg 143201

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>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181004

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    gttcaattgctacccggtca 365
              ||||||||||||||||||||
Sbjct: 151562 gttcaattgctacccggtca 151543

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>gb|AC113424.2| Homo sapiens chromosome 5 clone RP11-624C4, complete sequence
          Length = 194717

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    agacacgatgagaaaaagaa 64
             ||||||||||||||||||||
Sbjct: 18819 agacacgatgagaaaaagaa 18838

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>gb|AC113412.2| Homo sapiens chromosome 5 clone RP11-509M23, complete sequence
          Length = 169637

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     agacacgatgagaaaaagaa 64
              ||||||||||||||||||||
Sbjct: 119075 agacacgatgagaaaaagaa 119094

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>ref|NM_079998.2| Drosophila melanogaster arrow CG5912-RA (arr), mRNA
          Length = 6020

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ctccagtgggacaggcgcaa 435
            ||||||||||||||||||||
Sbjct: 1345 ctccagtgggacaggcgcaa 1326

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>gb|AY042642.1| Rhabdodendron macrophyllum maturase K (matK) gene, partial cds
          Length = 816

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 cttcaagcatccttttgtgc 311
           ||||||||||||||||||||
Sbjct: 365 cttcaagcatccttttgtgc 384

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>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183714

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   gttcaattgctacccggtca 365
             ||||||||||||||||||||
Sbjct: 89352 gttcaattgctacccggtca 89371

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>gb|AC074031.16| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163912

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   ggttctcaaactcaatgaat 521
             ||||||||||||||||||||
Sbjct: 87275 ggttctcaaactcaatgaat 87256

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>gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164405

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     aagacacgatgagaaaaaga 63
              ||||||||||||||||||||
Sbjct: 142116 aagacacgatgagaaaaaga 142135

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>emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in linkage group 10,
             complete sequence
          Length = 241472

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   tagtttggcatgaactttct 417
             ||||||||||||||||||||
Sbjct: 33460 tagtttggcatgaactttct 33441

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>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete
              sequence
          Length = 218107

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tgctttctctatagctaatt 172
              ||||||||||||||||||||
Sbjct: 193037 tgctttctctatagctaatt 193056

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>gb|AC090653.36| Mus musculus strain C57BL/6J chromosome 17 clone rp23-260k1, complete
             sequence
          Length = 191844

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   tgctttctctatagctaatt 172
             ||||||||||||||||||||
Sbjct: 89605 tgctttctctatagctaatt 89586

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>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence
          Length = 168509

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cttctactgttttatccttg 332
             ||||||||||||||||||||
Sbjct: 46139 cttctactgttttatccttg 46120

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>gb|AF223365.1|AF223365 Drosophila melanogaster LDL-related protein LRP6 mRNA, complete cds
          Length = 5037

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ctccagtgggacaggcgcaa 435
            ||||||||||||||||||||
Sbjct: 1165 ctccagtgggacaggcgcaa 1146

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>gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, region 50A1-50B1, P1 clones
             DS02357, DS05586, and BACR48I15, complete sequence
          Length = 146153

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ctccagtgggacaggcgcaa 435
             ||||||||||||||||||||
Sbjct: 77789 ctccagtgggacaggcgcaa 77770

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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
              sequence
          Length = 291923

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    ctccagtgggacaggcgcaa 435
              ||||||||||||||||||||
Sbjct: 157051 ctccagtgggacaggcgcaa 157070

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>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete
             sequence
          Length = 255329

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   gttcaattgctacccggtca 365
             ||||||||||||||||||||
Sbjct: 65839 gttcaattgctacccggtca 65858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,183,706
Number of Sequences: 3902068
Number of extensions: 6183706
Number of successful extensions: 142190
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141992
Number of HSP's gapped (non-prelim): 190
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result