ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18d16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506860.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0030C08.45 mRNA Length = 1012 Score = 373 bits (188), Expect = e-100 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Minus Query: 358 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 417 ||||||||||||||||||||||||||||||||| |||||||| || ||||| | |||||| Sbjct: 506 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 447 Query: 418 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 474 || |||||| || || |||||||||||||||| || | ||||| |||| ||||||||| Sbjct: 446 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 387 Query: 475 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 534 ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| || Sbjct: 386 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 327 Query: 535 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 594 || |||||||| || ||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 326 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 267 Query: 595 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 654 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| | Sbjct: 266 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 207 Query: 655 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 714 ||| | || ||||||||||||||||||| |||||| |||||||| ||||| |||||||| Sbjct: 206 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 147 Query: 715 cacgggaggcgtgtatctcttgatgc 740 ||||||||| |||||||||||||||| Sbjct: 146 cacgggaggggtgtatctcttgatgc 121
>ref|XM_466661.1| Oryza sativa (japonica cultivar-group), mRNA Length = 890 Score = 373 bits (188), Expect = e-100 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Minus Query: 358 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 417 ||||||||||||||||||||||||||||||||| |||||||| || ||||| | |||||| Sbjct: 531 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 472 Query: 418 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 474 || |||||| || || |||||||||||||||| || | ||||| |||| ||||||||| Sbjct: 471 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 412 Query: 475 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 534 ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| || Sbjct: 411 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 352 Query: 535 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 594 || |||||||| || ||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 351 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 292 Query: 595 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 654 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| | Sbjct: 291 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 232 Query: 655 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 714 ||| | || ||||||||||||||||||| |||||| |||||||| ||||| |||||||| Sbjct: 231 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 172 Query: 715 cacgggaggcgtgtatctcttgatgc 740 ||||||||| |||||||||||||||| Sbjct: 171 cacgggaggggtgtatctcttgatgc 146
>dbj|AK120252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045I01, full insert sequence Length = 890 Score = 373 bits (188), Expect = e-100 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Minus Query: 358 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 417 ||||||||||||||||||||||||||||||||| |||||||| || ||||| | |||||| Sbjct: 531 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 472 Query: 418 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 474 || |||||| || || |||||||||||||||| || | ||||| |||| ||||||||| Sbjct: 471 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 412 Query: 475 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 534 ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| || Sbjct: 411 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 352 Query: 535 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 594 || |||||||| || ||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 351 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 292 Query: 595 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 654 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| | Sbjct: 291 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 232 Query: 655 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 714 ||| | || ||||||||||||||||||| |||||| |||||||| ||||| |||||||| Sbjct: 231 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 172 Query: 715 cacgggaggcgtgtatctcttgatgc 740 ||||||||| |||||||||||||||| Sbjct: 171 cacgggaggggtgtatctcttgatgc 146
>dbj|AK061315.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D01, full insert sequence Length = 1014 Score = 373 bits (188), Expect = e-100 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Minus Query: 358 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 417 ||||||||||||||||||||||||||||||||| |||||||| || ||||| | |||||| Sbjct: 506 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 447 Query: 418 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 474 || |||||| || || |||||||||||||||| || | ||||| |||| ||||||||| Sbjct: 446 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 387 Query: 475 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 534 ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| || Sbjct: 386 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 327 Query: 535 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 594 || |||||||| || ||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 326 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 267 Query: 595 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 654 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| | Sbjct: 266 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 207 Query: 655 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 714 ||| | || ||||||||||||||||||| |||||| |||||||| ||||| |||||||| Sbjct: 206 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 147 Query: 715 cacgggaggcgtgtatctcttgatgc 740 ||||||||| |||||||||||||||| Sbjct: 146 cacgggaggggtgtatctcttgatgc 121
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Minus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 23931108 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 23931049 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 23931048 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 23930989 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 23930988 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 23930929 Query: 672 ccctatct 679 |||||||| Sbjct: 23930928 ccctatct 23930921 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Plus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 23438479 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 23438538 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 23438539 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 23438598 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 23438599 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 23438658 Query: 672 ccctatct 679 |||||||| Sbjct: 23438659 ccctatct 23438666 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 23932430 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 23932371 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 23437159 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 23437218 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 709 cctgtgcacgggaggcgtgtatctcttgatgc 740 ||||||||||||||| |||||||||||||||| Sbjct: 23928971 cctgtgcacgggaggggtgtatctcttgatgc 23928940
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Plus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 4162 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 4221 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 4222 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 4281 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 4282 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 4341 Query: 672 ccctatct 679 |||||||| Sbjct: 4342 ccctatct 4349 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 2842 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 2901
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Minus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 152774 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 152715 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 152714 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 152655 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 152654 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 152595 Query: 672 ccctatct 679 |||||||| Sbjct: 152594 ccctatct 152587 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 154096 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 154037 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 709 cctgtgcacgggaggcgtgtatctcttgatgc 740 ||||||||||||||| |||||||||||||||| Sbjct: 150637 cctgtgcacgggaggggtgtatctcttgatgc 150606
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Minus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 65072 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 65013 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 65012 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 64953 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 64952 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 64893 Query: 672 ccctatct 679 |||||||| Sbjct: 64892 ccctatct 64885 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 66394 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 66335 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 709 cctgtgcacgggaggcgtgtatctcttgatgc 740 ||||||||||||||| |||||||||||||||| Sbjct: 62935 cctgtgcacgggaggggtgtatctcttgatgc 62904
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 174 bits (88), Expect = 3e-40 Identities = 163/188 (86%) Strand = Plus / Plus Query: 492 tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 551 |||||||||| | ||||||||||||| ||||||| ||||| |||| |||||||| || | Sbjct: 57154 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 57213 Query: 552 tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 611 |||||||||| |||| |||||||| ||||| |||||| |||||||||| |||||||||| Sbjct: 57214 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 57273 Query: 612 ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 671 ||| ||||||| |||||||||||||||||||||| ||||| |||| | || ||||||| Sbjct: 57274 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 57333 Query: 672 ccctatct 679 |||||||| Sbjct: 57334 ccctatct 57341 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 367 ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 426 |||||||||||||||||||||||| |||||||| || ||||| | |||||||| |||||| Sbjct: 55834 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 55893
>gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127759 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 atcttgcatggctgtaatcatt 561 |||||||||||||||||||||| Sbjct: 48671 atcttgcatggctgtaatcatt 48650
>ref|NM_203176.1| Arabidopsis thaliana unknown protein AT5G48335 mRNA, complete cds Length = 662 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 cattgcagcagcccaacgttcactgagaagctg 501 ||||||||| | |||||| |||||||||||||| Sbjct: 336 cattgcagctgtccaacgatcactgagaagctg 304
>gb|BT015648.1| Arabidopsis thaliana At5g48335 gene, complete cds Length = 345 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 cattgcagcagcccaacgttcactgagaagctg 501 ||||||||| | |||||| |||||||||||||| Sbjct: 258 cattgcagctgtccaacgatcactgagaagctg 226
>gb|BT015141.1| Arabidopsis thaliana At5g48335 gene, complete cds Length = 604 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 cattgcagcagcccaacgttcactgagaagctg 501 ||||||||| | |||||| |||||||||||||| Sbjct: 324 cattgcagctgtccaacgatcactgagaagctg 292
>emb|BX833580.1|CNS09Z0C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL63ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 632 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 469 cattgcagcagcccaacgttcactgagaagctg 501 ||||||||| | |||||| |||||||||||||| Sbjct: 336 cattgcagctgtccaacgatcactgagaagctg 304
>emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chromosome X, complete sequence Length = 159892 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 taattagttccaggtgttgag 306 ||||||||||||||||||||| Sbjct: 95220 taattagttccaggtgttgag 95240
>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22, complete sequence Length = 206348 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggacattgtgaaggcgagtaa 47 ||||||||||||||||||||| Sbjct: 111759 ggacattgtgaaggcgagtaa 111739 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,980,856 Number of Sequences: 3902068 Number of extensions: 6980856 Number of successful extensions: 135473 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135365 Number of HSP's gapped (non-prelim): 104 length of query: 741 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 718 effective length of database: 17,143,297,704 effective search space: 12308887751472 effective search space used: 12308887751472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
