Clone Name | rbasd17o12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MCR_TUPGB (Q29131) Mineralocorticoid receptor (MR) | 28 | 5.2 | 2 | YCX7_CHLRE (P36495) 232.2 kDa protein (ORF1995) (ORF-S) (ORFA) | 28 | 6.8 | 3 | AGP2_YEAST (P38090) General amino acid permease AGP2 | 27 | 8.9 |
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>MCR_TUPGB (Q29131) Mineralocorticoid receptor (MR)| Length = 977 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 4/86 (4%) Frame = +1 Query: 130 THTHTQKEL*VEKPAAPQISSLLFWVHPNPILYREHDMIEICWHFL*TSQADEGHSIGSV 309 T+ KE V PQ+SS+ + P+P++ E+ EI + +S+ D ++ S Sbjct: 702 TYIAPAKEPSVNTALVPQLSSISRALTPSPVMVLENIEPEIVYAGYDSSKPDTAENLLST 761 Query: 310 LSL*WG--VTSIIKWP--APGTSKQP 375 L+ G + ++KW PG P Sbjct: 762 LNRLAGKQMIQVVKWAKVLPGFKNLP 787
>YCX7_CHLRE (P36495) 232.2 kDa protein (ORF1995) (ORF-S) (ORFA)| Length = 1995 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Frame = -1 Query: 390 HPWSVRLFGGPWCR----PLDNACHPPLEGQNAPNAMPLISL*CLQKVPTDFYHVMFPV* 223 H RLF GPW R L+N +P LE + P + + + FYH F Sbjct: 431 HQIRFRLFPGPWMRSLKKQLNNPANPSLETSTKAASGPRVEF--FRILFEQFYHPNFHDR 488 Query: 222 YRIWMNPKKER 190 + NP + R Sbjct: 489 AAMQTNPAEAR 499
>AGP2_YEAST (P38090) General amino acid permease AGP2| Length = 596 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/54 (27%), Positives = 21/54 (38%) Frame = -2 Query: 182 CGAAGFSTYSSFXXXXXXXXVLSCIFSRLSAITCWIINLCQGKPAGTYVVLCVV 21 C G YS L + S + + W+INL +VVLC+V Sbjct: 424 CNRHGVPIYSVAISLVWALVSLLQLNSNSAVVLNWLINLITASQLINFVVLCIV 477 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,819,596 Number of Sequences: 219361 Number of extensions: 1297501 Number of successful extensions: 2349 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2310 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2349 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)