>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 340   atcaagtggccggcaccagggacctccaaacaaccgcaca 379
             ||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 79670 atcaagtggccggcatcagggacctcaaaacaaccacaca 79631



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 356   cagggacctccaaacaaccgc 376
             |||||||||||||||||||||
Sbjct: 79628 cagggacctccaaacaaccgc 79608

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 340      atcaagtggccggcaccagggacctccaaacaaccgcaca 379
                ||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 19451804 atcaagtggccggcatcagggacctcaaaacaaccacaca 19451765



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 356      cagggacctccaaacaaccgc 376
                |||||||||||||||||||||
Sbjct: 19451762 cagggacctccaaacaaccgc 19451742

>dbj|AK121309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112D12, full
            insert sequence
          Length = 3328

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 340  atcaagtggccggcaccagggacctccaaacaaccgcaca 379
            ||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 3032 atcaagtggccggcatcagggacctcaaaacaaccacaca 2993



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 356  cagggacctccaaacaaccgc 376
            |||||||||||||||||||||
Sbjct: 2990 cagggacctccaaacaaccgc 2970

>dbj|AK070811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O10, full
            insert sequence
          Length = 3437

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 340  atcaagtggccggcaccagggacctccaaacaaccgcaca 379
            ||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 3123 atcaagtggccggcatcagggacctcaaaacaaccacaca 3084



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 356  cagggacctccaaacaaccgc 376
            |||||||||||||||||||||
Sbjct: 3081 cagggacctccaaacaaccgc 3061

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 340      atcaagtggccggcaccagggacctccaaacaaccgcaca 379
                ||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 19463080 atcaagtggccggcatcagggacctcaaaacaaccacaca 19463041



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 356      cagggacctccaaacaaccgc 376
                |||||||||||||||||||||
Sbjct: 19463038 cagggacctccaaacaaccgc 19463018

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 161      tggaaaagccagcagcaccac 181
                |||||||||||||||||||||
Sbjct: 23449932 tggaaaagccagcagcaccac 23449912

>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
              sequence
          Length = 144383

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    tggaaaagccagcagcaccac 181
              |||||||||||||||||||||
Sbjct: 132325 tggaaaagccagcagcaccac 132345

>emb|AM051354.1| Sus scrofa mRNA for beclin 1 (ATG6 gene)
          Length = 1608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 252 ctgttggcactttctgtaaacatca 276
           |||||||||||||||||| ||||||
Sbjct: 426 ctgttggcactttctgtagacatca 402

>emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chromosome 11 Contains two
              novel genes, the 5' end of the Accn1 gene for neuronal
              amiloride-sensitive cation channel 1 (degenerin) and the
              Ccl2 and Ccl7 genes for chemokine (C-C motif) ligand 2 and
              7, complete sequence
          Length = 223726

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    tataggtggaaaagccagcag 175
              |||||||||||||||||||||
Sbjct: 144628 tataggtggaaaagccagcag 144648

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 161      tggaaaagccagcagcaccac 181
                |||||||||||||||||||||
Sbjct: 23442960 tggaaaagccagcagcaccac 23442940

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 329     tgacaagcattatcaagtggc 349
               |||||||||||||||||||||
Sbjct: 2952330 tgacaagcattatcaagtggc 2952310

>gb|AC004263.1|AC004263 Homo sapiens PAC clone 278C19 from 12q, complete sequence
          Length = 106921

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   aaatatcttctctcctttttt 202
             |||||||||||||||||||||
Sbjct: 45878 aaatatcttctctcctttttt 45858

>gb|AC150650.5| Bos taurus  BAC CH240-447L3 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 148126

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 194   tccttttttgggttcatccaaatcctat 221
             |||||||||||||  |||||||||||||
Sbjct: 71396 tccttttttgggtaaatccaaatcctat 71369

>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    acatagtaccacatatgtac 46
             ||||||||||||||||||||
Sbjct: 87284 acatagtaccacatatgtac 87265

>gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, complete sequence
          Length = 191711

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tgatagaaatctgttggcactttc 265
             |||||||||||||| |||||||||
Sbjct: 77624 tgatagaaatctgtaggcactttc 77601

>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence
          Length = 179099

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     acatagtaccacatatgtac 46
              ||||||||||||||||||||
Sbjct: 135159 acatagtaccacatatgtac 135140

>gb|AC090846.4| Homo sapiens chromosome 15, clone RP11-485O10, complete sequence
          Length = 93925

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   acaaatatcttctctccttt 199
             ||||||||||||||||||||
Sbjct: 73125 acaaatatcttctctccttt 73106

>gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosome 12, complete
             sequence
          Length = 143190

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tagtaccacatatgtacctg 49
             ||||||||||||||||||||
Sbjct: 66447 tagtaccacatatgtacctg 66428

>gb|AC012379.7|AC012379 Homo sapiens chromosome 15 clone RP11-485O10 map 15q21.1, complete
             sequence
          Length = 174140

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   acaaatatcttctctccttt 199
             ||||||||||||||||||||
Sbjct: 20799 acaaatatcttctctccttt 20818

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 181      caaatatcttctctcctttt 200
                ||||||||||||||||||||
Sbjct: 20859819 caaatatcttctctcctttt 20859800

>gb|AC092644.3| Homo sapiens BAC clone RP11-394A2 from 2, complete sequence
          Length = 171099

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gcaccacaaatatcttctct 194
             ||||||||||||||||||||
Sbjct: 30348 gcaccacaaatatcttctct 30367

>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0039D04
          Length = 184408

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   caaatatcttctctcctttt 200
             ||||||||||||||||||||
Sbjct: 70609 caaatatcttctctcctttt 70590

>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete
              sequence
          Length = 323775

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     acatagtaccacatatgtac 46
              ||||||||||||||||||||
Sbjct: 301534 acatagtaccacatatgtac 301515

>gb|AC174776.3| Mus musculus BAC clone RP23-349J24 from chromosome 12, complete
            sequence
          Length = 195214

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   tagtaccacatatgtacctg 49
            ||||||||||||||||||||
Sbjct: 4025 tagtaccacatatgtacctg 4006

>gb|AF015576.1|AF015576 Nannochloropsis salina ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 1364

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 158 tctgtaaacatcacaagctg 139

>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tgatagaaatctgttggcactttc 265
             |||||||||||||| |||||||||
Sbjct: 46243 tgatagaaatctgtaggcactttc 46266

>dbj|AB052735.1| Nannochloropsis gaditana chloroplast gene for
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial cds, strain:MBIC10418
          Length = 1451

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 189 tctgtaaacatcacaagctg 170

>dbj|AB052734.1| Nannochloropsis gaditana chloroplast gene for
           ribulose-1,5-bisphosphate carbxylase/oxygenase large
           subunit, partial cds, strain:MBIC10123
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 184 tctgtaaacatcacaagctg 165

>dbj|AB052288.1| Nannochloropsis salina chloroplast rbcL gene for
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial cds, strain:CCAP849/2
          Length = 1436

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 185 tctgtaaacatcacaagctg 166

>dbj|AB052287.1| Nannochloropsis salina chloroplast rbcL gene for
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial cds, strain:MBIC10063
          Length = 1459

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 202 tctgtaaacatcacaagctg 183

>dbj|AB052279.1| Nannochloropsis gaditana chloroplast rbcL gene for
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, partial cds, strain:MBIC10118
          Length = 1439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 tctgtaaacatcacaagctg 283
           ||||||||||||||||||||
Sbjct: 193 tctgtaaacatcacaagctg 174


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,373,983
Number of Sequences: 3902068
Number of extensions: 3373983
Number of successful extensions: 58632
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58490
Number of HSP's gapped (non-prelim): 142
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)