ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17o11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 31 tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 90 |||||| |||||||||||||| | ||| |||||| || |||||||| |||||||| | Sbjct: 10260040 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 10259981 Query: 91 tgccaagtgcctcaagtctcta 112 |||||| ||||||||||||||| Sbjct: 10259980 tgccaactgcctcaagtctcta 10259959 Score = 65.9 bits (33), Expect = 1e-07 Identities = 201/257 (78%) Strand = Plus / Minus Query: 134 actttattggcaatgaagacactatccaagacagagcgcaaatggttttcacttccttga 193 ||||| |||||| |||| | | ||||||| |||||| ||| |||||||| ||||||| Sbjct: 10259062 actttgttggcagtgaaaatagtatccaaaacagagtgcacgaggttttcatttccttgc 10259003 Query: 194 acgaggccatccttggccttacccatgactggatcaggccctttcacaggaatgttagat 253 || | |||||| ||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 10259002 actggaccatccctggccttgttcatatttggatcaggcccttttgaaggaatgttagac 10258943 Query: 254 ctggctgaattcttggttttcctctgttcagtagcgctgcgtgtctctaggggatcaggc 313 ||| || |||||||||||||| |||||| |||| ||||||| | | ||| || Sbjct: 10258942 ttggttgtgttcttggttttccttgcctcagtattgctggatgtctcttgagattcacgc 10258883 Query: 314 atggttgccgcgcgaactgaccaagcattttcttgctccttgactatatgggggtgacgt 373 || |||| | | || || |||||||||| ||||||||||||||||||||||| | ||| Sbjct: 10258882 atagttgtctcacgtacagaccaagcatgatcttgctccttgactatatggggatagcgt 10258823 Query: 374 tttatgaaggatgaatc 390 |||||||||| ||||| Sbjct: 10258822 cttatgaaggaagaatc 10258806
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 31 tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 90 |||||| |||||||||||||| | ||| |||||| || |||||||| |||||||| | Sbjct: 66063 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 66004 Query: 91 tgccaagtgcctcaagtctcta 112 |||||| ||||||||||||||| Sbjct: 66003 tgccaactgcctcaagtctcta 65982 Score = 65.9 bits (33), Expect = 1e-07 Identities = 201/257 (78%) Strand = Plus / Minus Query: 134 actttattggcaatgaagacactatccaagacagagcgcaaatggttttcacttccttga 193 ||||| |||||| |||| | | ||||||| |||||| ||| |||||||| ||||||| Sbjct: 65085 actttgttggcagtgaaaatagtatccaaaacagagtgcacgaggttttcatttccttgc 65026 Query: 194 acgaggccatccttggccttacccatgactggatcaggccctttcacaggaatgttagat 253 || | |||||| ||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 65025 actggaccatccctggccttgttcatatttggatcaggcccttttgaaggaatgttagac 64966 Query: 254 ctggctgaattcttggttttcctctgttcagtagcgctgcgtgtctctaggggatcaggc 313 ||| || |||||||||||||| |||||| |||| ||||||| | | ||| || Sbjct: 64965 ttggttgtgttcttggttttccttgcctcagtattgctggatgtctcttgagattcacgc 64906 Query: 314 atggttgccgcgcgaactgaccaagcattttcttgctccttgactatatgggggtgacgt 373 || |||| | | || || |||||||||| ||||||||||||||||||||||| | ||| Sbjct: 64905 atagttgtctcacgtacagaccaagcatgatcttgctccttgactatatggggatagcgt 64846 Query: 374 tttatgaaggatgaatc 390 |||||||||| ||||| Sbjct: 64845 cttatgaaggaagaatc 64829
>dbj|AK100341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B07, full insert sequence Length = 3376 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 31 tgcagcatttgacagagcttggaaccttgctccatctttcctgtcagaggcatattttac 90 |||||| |||||||||||||| | ||| |||||| || |||||||| |||||||| | Sbjct: 952 tgcagcgtttgacagagcttgcagttttggtccatcctttctgtcagaagcatatttagc 893 Query: 91 tgccaagtgcctcaagtctcta 112 |||||| ||||||||||||||| Sbjct: 892 tgccaactgcctcaagtctcta 871
>gb|AC158622.4| Mus musculus 10 BAC RP23-292G1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232339 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 tttcctgtcagaggcatattttact 91 |||||||||||||||||||| |||| Sbjct: 78074 tttcctgtcagaggcatattgtact 78098
>emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on chromosome 11 Contains the gene for nuclear DNA binding protein C1d and a aldo-keto reductase family 1 member B3 (aldose reductase) (Akr1b3) pseudogene, complete sequence Length = 232869 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 atttttgtaaactcaagcata 535 ||||||||||||||||||||| Sbjct: 8119 atttttgtaaactcaagcata 8099
>gb|AC105430.2| Homo sapiens chromosome 16 clone RP11-2C15, complete sequence Length = 105731 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 ttgaagcttctcccttctttt 435 ||||||||||||||||||||| Sbjct: 99063 ttgaagcttctcccttctttt 99043
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 tgctactataaacttgtagtcttg 417 |||||||||| ||||||||||||| Sbjct: 15026000 tgctactatagacttgtagtcttg 15026023
>gb|AF016677.1| Caenorhabditis elegans cosmid ZK1240, complete sequence Length = 17030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cgcaaatggttttcacttcc 189 |||||||||||||||||||| Sbjct: 5757 cgcaaatggttttcacttcc 5738
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 tgctactataaacttgtagtcttg 417 |||||||||| ||||||||||||| Sbjct: 16762 tgctactatagacttgtagtcttg 16739
>gb|AC129778.5| Homo sapiens BAC clone RP11-1221G12 from UL, complete sequence Length = 236177 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 213923 ttggttttcctctgttcagt 213942
>emb|Z48045.1|CEC41C4 Caenorhabditis elegans Cosmid C41C4, complete sequence Length = 39750 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttacgagaaagtgatacaca 24 |||||||||||||||||||| Sbjct: 14564 ttacgagaaagtgatacaca 14545
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 142658 actggatcaggccctttcac 142677
>gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184c17 map 16, complete sequence Length = 146040 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 118678 actggatcaggccctttcac 118659
>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence Length = 223119 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tttttgtaaactcaagcataattt 539 ||||||||||||||| |||||||| Sbjct: 84175 tttttgtaaactcaatcataattt 84152
>emb|BX255923.13| Human DNA sequence from clone RP11-115J7 on chromosome 9 Contains the 5' end of a pseudogene similar to part of phosphoglucomutase 5 (PGRM) (PGM5), a novel gene, the gene for a novel forkhead box D4 (FOXD4) protein, the gene for a novel protein similar to COBW domain containing 1 (CBWD1) and four CpG islands, complete sequence Length = 179342 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 45098 ttggttttcctctgttcagt 45079
>emb|BX284632.11| Human DNA sequence from clone RP11-460E7 on chromosome 9 Contains a gene similar to COBW-like protein (LOC55871), the FOXD4L4 gene for forkhead box D4 like 4, an immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a pseudogene similar to part of tripartite motif-containing protein family, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) and three CpG islands, complete sequence Length = 187806 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 142026 ttggttttcctctgttcagt 142045
>emb|AL732509.4| Human DNA sequence from clone CTD-2245E12 on chromosome X Contains the 5' end of the PHKA2 gene for phosphorylase kinase, alpha 2 (liver), the 3' end of the GPR64 gene for G protein-coupled receptor 64 and a CpG island, complete sequence Length = 128189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gcatttgacagagcttggaa 54 |||||||||||||||||||| Sbjct: 85838 gcatttgacagagcttggaa 85819
>emb|AL512605.13| Human DNA sequence from clone RP11-15J10 on chromosome 9 Contains a pseudogene similar to part of COBW doamin family protein, the FOXD4L2 gene for forkhead box D4 like 2, an immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a pseudogene similar to part of cytochrome P450 family protein, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) and four CpG islands, complete sequence Length = 158187 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 149306 ttggttttcctctgttcagt 149325
>emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chromosome 1, complete sequence Length = 75171 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 gggggtgacgttttatgaaggatg 386 ||||||| |||||||||||||||| Sbjct: 24955 gggggtgccgttttatgaaggatg 24932
>emb|AL356244.12| Human DNA sequence from clone RP11-174M15 on chromosome 9 Contains the 5' end of the gene for COBW-like protein (LOC55871), 2 novel genes, the 5' end of a novel gene (contains FLJ36253 and FLJ00026) and a CpG island, complete sequence Length = 175153 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 21869 ttggttttcctctgttcagt 21888
>emb|AL353608.20| Human DNA sequence from clone RP11-561O23 on chromosome 9 Contains four novel genes, the CBWD3 gene for COBW domain containing 3, the FOXD4L3 gene for forkhead box D4 like 3, the 5' end of the PGM5 gene for phosphoglucomutase 5, and four CpG islands, complete sequence Length = 172991 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 50711 ttggttttcctctgttcagt 50692
>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197883 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aattcttggttttcctctgttcag 284 |||| ||||||||||||||||||| Sbjct: 168382 aatttttggttttcctctgttcag 168359
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11, complete sequence Length = 179563 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 aggtatggattccatttttg 521 |||||||||||||||||||| Sbjct: 94336 aggtatggattccatttttg 94355
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aatggttttcacttccttga 193 |||||||||||||||||||| Sbjct: 93759 aatggttttcacttccttga 93778
>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 118235 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 100374 actggatcaggccctttcac 100393
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 tgctactataaacttgtagtcttg 417 |||||||||| ||||||||||||| Sbjct: 128773 tgctactatagacttgtagtcttg 128750
>gb|AF435952.1|AF435952 Caenorhabditis elegans Ser/Thr protein kinase (ire1) mRNA, complete cds Length = 3344 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttacgagaaagtgatacaca 24 |||||||||||||||||||| Sbjct: 1699 ttacgagaaagtgatacaca 1718
>gb|AC093413.2| Homo sapiens chromosome 3 clone RP11-170K19, complete sequence Length = 175699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aatggttttcacttccttga 193 |||||||||||||||||||| Sbjct: 59453 aatggttttcacttccttga 59434
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 133549 actggatcaggccctttcac 133568
>dbj|AK035477.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530053J19 product:unclassifiable, full insert sequence Length = 2029 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 612 actggatcaggccctttcac 593
>ref|NM_063300.3| Caenorhabditis elegans IRE1 kinase related family member (ire-1) (ire-1) mRNA, complete cds Length = 3306 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttacgagaaagtgatacaca 24 |||||||||||||||||||| Sbjct: 1687 ttacgagaaagtgatacaca 1706
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 tgctactataaacttgtagtcttg 417 |||||||||| ||||||||||||| Sbjct: 15020534 tgctactatagacttgtagtcttg 15020557
>emb|BX004816.11| Zebrafish DNA sequence from clone DKEY-30G5 in linkage group 3, complete sequence Length = 231341 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tttttgtaaactcaagcataattt 539 ||||||||||||||| |||||||| Sbjct: 177670 tttttgtaaactcaatcataattt 177647
>dbj|BA000027.2| Oryzias latipes DNA, MHC Class I Region Length = 425935 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 tctgatcagtctttctacat 494 |||||||||||||||||||| Sbjct: 243194 tctgatcagtctttctacat 243213
>gb|AC016745.6| Homo sapiens BAC clone RP11-480C16 from 2, complete sequence Length = 157358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 126761 ttggttttcctctgttcagt 126742
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence Length = 158595 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 actggatcaggccctttcac 240 |||||||||||||||||||| Sbjct: 157928 actggatcaggccctttcac 157909
>dbj|AK174630.1| Ciona intestinalis cDNA, clone:cigd049l15, full insert sequence Length = 1813 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaatggttttcacttccttg 192 |||||||||||||||||||| Sbjct: 1545 aaatggttttcacttccttg 1564
>emb|AL163540.11| Human DNA sequence from clone RP11-348N17 on chromosome 22, complete sequence Length = 166566 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 21436 ttggttttcctctgttcagt 21455
>emb|BX005442.10| Zebrafish DNA sequence from clone DKEY-88J15, complete sequence Length = 200176 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tttttgtaaactcaagcataattt 539 ||||||||||||||| |||||||| Sbjct: 160924 tttttgtaaactcaatcataattt 160901
>emb|AL731809.17| Human DNA sequence from clone RP13-354N4 on chromosome 9, complete sequence Length = 202611 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 85403 ttggttttcctctgttcagt 85384
>emb|BX901950.7| Zebrafish DNA sequence from clone DKEY-111C4 in linkage group 6, complete sequence Length = 146043 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tgctccatctttcctgtcag 77 |||||||||||||||||||| Sbjct: 70447 tgctccatctttcctgtcag 70466
>gb|AC145363.4| Dasypus novemcinctus clone VMRC5-356N21, complete sequence Length = 108046 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctgaattcttggttttcctc 277 |||||||||||||||||||| Sbjct: 35059 ctgaattcttggttttcctc 35040
>emb|AL772360.4| Human DNA sequence from clone RP11-35J7 on chromosome 9, complete sequence Length = 136659 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 70476 ttggttttcctctgttcagt 70457
>emb|AL591968.4| Human DNA sequence from clone RP13-39F9 on chromosome 9, complete sequence Length = 73947 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ttggttttcctctgttcagt 285 |||||||||||||||||||| Sbjct: 23668 ttggttttcctctgttcagt 23687
>gb|M20131.1|RATCYP45I Rat cytochrome P450IIE1 gene, complete cds Length = 12728 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 cattttcttgctccttgactatat 362 ||||| |||||||||||||||||| Sbjct: 9051 catttacttgctccttgactatat 9028
>emb|AL672144.8| Mouse DNA sequence from clone RP23-40H13 on chromosome X, complete sequence Length = 85651 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tttgtgcagcatttgacagagctt 50 |||||||| ||||||||||||||| Sbjct: 64983 tttgtgcaacatttgacagagctt 65006 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,187,598 Number of Sequences: 3902068 Number of extensions: 5187598 Number of successful extensions: 95317 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95153 Number of HSP's gapped (non-prelim): 164 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
