ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18d10 |
|---|---|
| Clone Library Name | barley_pub |
>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5| Length = 435 Score = 125 bits (315), Expect = 9e-29 Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 2/132 (1%) Frame = -2 Query: 697 RGMYP-SSEWSGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQ-ELPSDEYPE 524 RG+ P +S+W+GY Y P S + VN+ + + +Q ++ +E+PE Sbjct: 277 RGVTPQASDWNGYQA---SSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPE 333 Query: 523 RPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYG 344 RP +PEC +++K+G CKFK KCKYHHP++ +P A + + GLPLRPDQ MCT+Y RYG Sbjct: 334 RPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYG 393 Query: 343 VCKFGPACMYNH 308 +CKFGPAC ++H Sbjct: 394 ICKFGPACRFDH 405 Score = 79.7 bits (195), Expect = 8e-15 Identities = 35/96 (36%), Positives = 53/96 (55%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTAR 413 NHP+ R + + DE E P EC+++ ++G CK+ C++ H + P + Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVP 184 Query: 412 ALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 L+ LGLP+RP + C +Y R G CKFG C +NHP Sbjct: 185 ELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220 Score = 47.0 bits (110), Expect = 6e-05 Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 6/109 (5%) Frame = -2 Query: 607 PAPPVNHPMYRG-----ADVQGHQELPSDEYP-ERPGEPECQHFVKSGFCKFKVKCKYHH 446 P P P RG +D G+Q S YP ER + V + + +Y H Sbjct: 267 PFIPSMFPHSRGVTPQASDWNGYQA--SSAYPPERSPLAPSSYQVNNSLAETSSFSQYQH 324 Query: 445 PRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFN 299 S+ P RPDQP CTYY + G CKF C Y+HP N Sbjct: 325 QMSVEE-----------FPERPDQPECTYYLKTGDCKFKYKCKYHHPKN 362 Score = 43.9 bits (102), Expect = 5e-04 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = -2 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHP 305 P+RPD C++Y R G CK+G +C +NHP Sbjct: 99 PVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein| ZFN-like 6 Length = 448 Score = 124 bits (310), Expect = 4e-28 Identities = 54/113 (47%), Positives = 76/113 (67%), Gaps = 4/113 (3%) Frame = -2 Query: 562 QGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLR 383 Q ++P++E+PERP +PEC +++K+G CKFK CKYHHP++ +P AL+ GLPLR Sbjct: 333 QYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLR 392 Query: 382 PDQPMCTYYERYGVCKFGPACMYNH----PFNFGHPVSAAGPPLSAQYLTSGN 236 PDQ +CTYY RYG+CKFGPAC ++H P++ + PP Q +GN Sbjct: 393 PDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP---QVSANGN 442 Score = 68.2 bits (165), Expect = 2e-11 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPE-RPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTA 416 NHP+ R + ++ E + G +C+++ ++G CK+ C+++H +A Sbjct: 134 NHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASA 193 Query: 415 RALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 L+ LGLPLRP + C YY R G CK+G C +NHP Sbjct: 194 PELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHP 230 Score = 42.0 bits (97), Expect = 0.002 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = -2 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHP 305 P+RP C++Y R G CKFG +C +NHP Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136
>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3| Length = 375 Score = 118 bits (296), Expect = 2e-26 Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 4/110 (3%) Frame = -2 Query: 559 GHQELPSDE-YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLR 383 G LP + +PERPG+PECQ ++K+G CKF CK+HHPR PP LS +GLPLR Sbjct: 230 GFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLR 289 Query: 382 PDQPMCTYYERYGVCKFGPACMYNHP---FNFGHPVSAAGPPLSAQYLTS 242 P +P+C +Y RYG+CKFGP+C ++HP F + + ++ P S T+ Sbjct: 290 PGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETA 339 Score = 94.4 bits (233), Expect = 3e-19 Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 4/118 (3%) Frame = -2 Query: 535 EYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYY 356 EYPER G+PEC+ ++K+G CKF V CK+HHPR+ + +++ L PLRP++ C+Y+ Sbjct: 83 EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYF 142 Query: 355 ERYGVCKFGPACMYNHP--FNFGHPVSAAGPPL--SAQYLTSGNYPV*QAGQSFFLWS 194 R G CKFG C +NHP + VS G P+ + Q LT GQ + WS Sbjct: 143 LRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT---------GQPSYSWS 191 Score = 73.6 bits (179), Expect = 6e-13 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Frame = -2 Query: 532 YPERPGEPECQHFVKSGFCKFKVKCKYHHP--RSLVPPPTARALSPLGLPLRPDQPMCTY 359 YPER GEP+C +++++G C+F C+++HP R LV A A P R QP C + Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLV---IATARIKGEYPERIGQPECEF 95 Query: 358 YERYGVCKFGPACMYNHPFN 299 Y + G CKFG C ++HP N Sbjct: 96 YLKTGTCKFGVTCKFHHPRN 115 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRS 437 +HP + A + G + YP RP E +C +F++ G CKF CK++HP++ Sbjct: 111 HHPRNK-AGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQT 161
>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1| Length = 397 Score = 117 bits (294), Expect = 3e-26 Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 1/86 (1%) Frame = -2 Query: 559 GHQELPSDE-YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLR 383 G+ LP + +PERPG+PECQ ++K+G CKF CK+HHPR PP LS +GLPLR Sbjct: 261 GYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLR 320 Query: 382 PDQPMCTYYERYGVCKFGPACMYNHP 305 P +P+C +Y RYG+CKFGP+C ++HP Sbjct: 321 PGEPLCVFYTRYGICKFGPSCKFDHP 346 Score = 93.2 bits (230), Expect = 7e-19 Identities = 39/77 (50%), Positives = 53/77 (68%) Frame = -2 Query: 535 EYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYY 356 EYPER G+PEC++++K+G CKF V CK+HHPR+ +L+ LG PLR ++ C Y+ Sbjct: 81 EYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYF 140 Query: 355 ERYGVCKFGPACMYNHP 305 R G CKFG C +NHP Sbjct: 141 LRTGHCKFGGTCKFNHP 157 Score = 82.0 bits (201), Expect = 2e-15 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Frame = -2 Query: 604 APPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSL-VP 428 +P +N ++ + + + YPERPGEP+C +++++G C+F C+++HPR + Sbjct: 13 SPLMNQDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELV 72 Query: 427 PPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFN 299 TAR P R QP C YY + G CKFG C ++HP N Sbjct: 73 IATARMRGE--YPERIGQPECEYYLKTGTCKFGVTCKFHHPRN 113 Score = 44.7 bits (104), Expect = 3e-04 Identities = 22/58 (37%), Positives = 33/58 (56%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPT 419 +HP + A + G L YP R E +C +F+++G CKF CK++HP+ P PT Sbjct: 109 HHPRNK-AGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQ---PQPT 162
>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like| Length = 417 Score = 112 bits (281), Expect = 8e-25 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Frame = -2 Query: 589 HPMYRGADVQ-GHQELPSDE-YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTA 416 + YR V G L D +PERP +PECQ ++K+G CKF C++HHPR P Sbjct: 254 YSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPD 313 Query: 415 RALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 LSP+GLPLRP +P+C +Y RYG+CKFGP+C ++HP Sbjct: 314 CVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 350 Score = 89.0 bits (219), Expect = 1e-17 Identities = 37/77 (48%), Positives = 51/77 (66%) Frame = -2 Query: 535 EYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYY 356 E+PER G+PECQ+++K+G CKF C++HHP+ AL+ LG PLRP++ YY Sbjct: 71 EFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYY 130 Query: 355 ERYGVCKFGPACMYNHP 305 R G CKFG C ++HP Sbjct: 131 LRTGQCKFGNTCKFHHP 147 Score = 78.6 bits (192), Expect = 2e-14 Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Frame = -2 Query: 568 DVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHP--RSLVPPPTARALSPLG 395 +++ + + S YPE PGEP+C +++++G C+F C+++HP R L A A Sbjct: 15 NLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLA---IATARMKGE 71 Query: 394 LPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 P R QP C YY + G CKFG C ++HP Sbjct: 72 FPERLGQPECQYYLKTGTCKFGATCRFHHP 101 Score = 44.7 bits (104), Expect = 3e-04 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Frame = -2 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAA----------GPPLSAQYLTS 242 P P +P C+YY R G+C+FG C +NHP N ++ A G P YL + Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGEFPERLGQPECQYYLKT 87 Query: 241 G 239 G Sbjct: 88 G 88 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/71 (36%), Positives = 37/71 (52%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTAR 413 +HP + A V G L YP RP E E +++++G CKF CK+HHP+ P+ Sbjct: 99 HHPKDK-AGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQ-----PSNM 152 Query: 412 ALSPLGLPLRP 380 LS G + P Sbjct: 153 VLSMRGSTVYP 163 Score = 40.8 bits (94), Expect = 0.004 Identities = 19/44 (43%), Positives = 23/44 (52%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPL 398 P RPGEP C + + G CKF CK+ HP + T SPL Sbjct: 322 PLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIF---TYNVASPL 362
>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 437 Score = 112 bits (281), Expect = 8e-25 Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 12/141 (8%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLGPYYTPGI-------SFHHFPAPPVNHPMYRGADVQGHQELPSD 536 GM P S W+ Y Q L +PG S + + Y G +Q +PS Sbjct: 218 GMVPYSGWNPY-QASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGT----YQSVPSS 272 Query: 535 -----EYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQP 371 E+P+RP +PECQ+F+++G CKF C+YHHP VPP T LS +GLPLRP Sbjct: 273 NSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVA 332 Query: 370 MCTYYERYGVCKFGPACMYNH 308 CT++ ++G+CKFGPAC ++H Sbjct: 333 QCTHFAQHGICKFGPACKFDH 353 Score = 103 bits (257), Expect = 5e-22 Identities = 55/119 (46%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPR------SLV 431 NHP RGA + G + + PER G P CQHF+++G CKF CKYHHPR S+ Sbjct: 53 NHPRDRGAVIGGVRG-EAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVA 111 Query: 430 PPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSAQ 254 P +LS LG PLRP + C+YY R G CKFG C +NHP P++ GPP Q Sbjct: 112 PV----SLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPV----PLAVQGPPQQPQ 162 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/55 (43%), Positives = 31/55 (56%) Frame = -2 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSAQYLTSGNYPV 227 P RPDQP C Y+ R G CKFG +C Y+HP + A PP + L+S P+ Sbjct: 280 PQRPDQPECQYFMRTGDCKFGSSCRYHHPVD-------AVPPKTGIVLSSIGLPL 327 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = -2 Query: 547 LPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRP 380 L S P RPG +C HF + G CKF CK+ H S + A S +P+ P Sbjct: 320 LSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAP 375
>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3| Length = 466 Score = 111 bits (278), Expect = 2e-24 Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 4/125 (3%) Frame = -2 Query: 667 GYHQVPLGPYYTPGISFHHFPAPPVNHPMY----RGADVQGHQELPSDEYPERPGEPECQ 500 G+ V GP+Y G+S H P+ V + + + +P RPG+PECQ Sbjct: 250 GHQTVQAGPFY--GLS-HQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQ 306 Query: 499 HFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPAC 320 +++K+G CKF CKYHHP+ L P + LSPLGLPLRP C YY ++G CKFGP C Sbjct: 307 YYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTC 366 Query: 319 MYNHP 305 ++HP Sbjct: 367 KFDHP 371 Score = 90.9 bits (224), Expect = 3e-18 Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 3/99 (3%) Frame = -2 Query: 592 NHPMYRGADVQ---GHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPP 422 NHP R A G + S EYPERPG+P C++++K+G CKF CKY HPR Sbjct: 75 NHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPRE--GSV 132 Query: 421 TARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 A L+ G PLR + CTYY + G CKFG C ++HP Sbjct: 133 QAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHP 171 Score = 77.0 bits (188), Expect = 5e-14 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%) Frame = -2 Query: 559 GHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPR----SLVPPPTARALSPLGL 392 G + + + PERPGE +C +++++G C + C+Y+HPR + V + Sbjct: 39 GGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEY 98 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHP 305 P RP QP+C YY + G CKFG C Y+HP Sbjct: 99 PERPGQPVCEYYMKNGTCKFGSNCKYDHP 127 Score = 49.7 bits (117), Expect = 9e-06 Identities = 23/55 (41%), Positives = 28/55 (50%) Frame = -2 Query: 445 PRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS 281 P S P++ + P RP QP C YY + G CKFG AC Y+HP P S Sbjct: 279 PLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKS 333
>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 468 Score = 110 bits (276), Expect = 3e-24 Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 14/144 (9%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLGPYYTPGISF--------------HHFPAPPVNHPMYRGADVQG 557 G+ P WS Y P+ P +PG P+ P +P Sbjct: 222 GVVPIPGWSPY-SAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVI 280 Query: 556 HQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPD 377 +E +PERPGEPECQ+++K+G CKF CK+HHPR VPP LSP+GLPLRP Sbjct: 281 QKE---QAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPG 337 Query: 376 QPMCTYYERYGVCKFGPACMYNHP 305 CT+Y + G CKFG C ++HP Sbjct: 338 VQRCTFYVQNGFCKFGSTCKFDHP 361 Score = 85.5 bits (210), Expect = 1e-16 Identities = 46/112 (41%), Positives = 62/112 (55%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTAR 413 NHP R A V+ + +YPER GEP CQ ++K+G CKF CK+HHP++ + Sbjct: 69 NHPRDR-ASVEATVRA-TGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHV 126 Query: 412 ALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSA 257 L+ G P+R C+YY + G CKFG C ++HP G V PP SA Sbjct: 127 PLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPP--PPASA 176 Score = 81.6 bits (200), Expect = 2e-15 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%) Frame = -2 Query: 547 LPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVP-PPTARALSPLGLPLRPDQP 371 L SD YPERPG P+C +++++G C + +C+Y+HPR T RA P R +P Sbjct: 37 LGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQ--YPERFGEP 94 Query: 370 MCTYYERYGVCKFGPACMYNHPFNFGHPVS 281 C +Y + G CKFG +C ++HP N G +S Sbjct: 95 PCQFYLKTGTCKFGASCKFHHPKNAGGSMS 124 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVP-PPTARALS 404 P RPG C +V++GFCKF CK+ HP + P+A +L+ Sbjct: 333 PLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLA 375
>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2| Length = 439 Score = 105 bits (262), Expect = 1e-22 Identities = 41/76 (53%), Positives = 55/76 (72%) Frame = -2 Query: 532 YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYE 353 +PERP +PECQ+++K+G CKF CK+HHPR P LSP+GLPLRP + +C +Y Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 388 Query: 352 RYGVCKFGPACMYNHP 305 RYG+CKFG C ++HP Sbjct: 389 RYGICKFGANCKFDHP 404 Score = 100 bits (248), Expect = 6e-21 Identities = 46/110 (41%), Positives = 62/110 (56%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTAR 413 NHP R + + EYPER G+PECQ+++K+G CKF CK+HHPR Sbjct: 104 NHPQDRNLAIASARM--KGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRV 161 Query: 412 ALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 L+ LG PLRP + C YY + G CK+G C ++HP F S+ G P+ Sbjct: 162 QLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPI 211 Score = 83.6 bits (205), Expect = 5e-16 Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 2/105 (1%) Frame = -2 Query: 613 HFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHP--R 440 H PA M++ + G + YPER GEP+C +++++G C+F + C+++HP R Sbjct: 50 HDPAALYGEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDR 109 Query: 439 SLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 +L A A P R QP C YY + G CKFGP C ++HP Sbjct: 110 NLA---IASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHP 151 Score = 40.4 bits (93), Expect = 0.005 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 P RPGE C+ + + G CKF CK+ HP ++ PP Sbjct: 376 PLRPGEELCKFYSRYGICKFGANCKFDHP-TMAPP 409
>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1| Length = 476 Score = 105 bits (262), Expect = 1e-22 Identities = 62/166 (37%), Positives = 80/166 (48%), Gaps = 21/166 (12%) Frame = -2 Query: 694 GMYPSSEWSGY-------------HQVPLGPYYTPGISFHH-------FPAPPVNHPMYR 575 GM P WS Y V GP Y G HH + P V + Sbjct: 236 GMIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMG---HHGSSSTIAYGGPYVPYASST 292 Query: 574 GADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLG 395 G QE +PERPG+P+CQ+++++G CKF CKYHHPR L P + ++ L Sbjct: 293 GQSSNNQQE---HGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLC 349 Query: 394 LPLRPDQPMCTYYERYGVCKFGPACMYNHPF-NFGHPVSAAGPPLS 260 LPLRP C YY + G C++G AC Y+HP G+ SA PLS Sbjct: 350 LPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSAL--PLS 393 Score = 89.0 bits (219), Expect = 1e-17 Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Frame = -2 Query: 592 NHPMYRGADV--QGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPR---SLVP 428 NHP RG G + + +YPER G+P C++++K+G CKF CKYHHP+ +++P Sbjct: 83 NHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP 142 Query: 427 PPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS-AAGPPLSAQY 251 L+ G P+R + C+YY + G CKFG C ++HP G P++ PPL + Sbjct: 143 V----MLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPS 198 Query: 250 LTS 242 + S Sbjct: 199 IAS 201 Score = 77.0 bits (188), Expect = 5e-14 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 3/78 (3%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPP---TARALSPLGLPLRPDQPMCTY 359 PERPGE +C +++++G C F +C+Y+HPR AR + L P R QP+C Y Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116 Query: 358 YERYGVCKFGPACMYNHP 305 Y + G CKFG C Y+HP Sbjct: 117 YMKTGTCKFGTNCKYHHP 134 Score = 43.1 bits (100), Expect = 8e-04 Identities = 18/34 (52%), Positives = 20/34 (58%) Frame = -2 Query: 394 LPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFG 293 LP RP + C YY R G C FG C YNHP + G Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRG 89
>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3| Length = 465 Score = 100 bits (248), Expect = 6e-21 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLGPYYTPGIS--------FHHFPAPPVNHPMYRGADVQGHQELPS 539 GM P S W+ Y Q + +PG + P P + P Y+ Sbjct: 237 GMVPYSGWNPY-QASVSAMPSPGTQPSMGTSSVYGITPLSP-SAPAYQSGPSSTGVSNKE 294 Query: 538 DEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTY 359 +P+RP +PECQ+F+++G CKF C++HHP P A LS +GLPLRP CT+ Sbjct: 295 QTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPE-ASTLSHIGLPLRPGAVPCTH 353 Query: 358 YERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSAQYLTSGNYP 230 + ++G+CKFGPAC ++H +S + P S + YP Sbjct: 354 FAQHGICKFGPACKFDHSLG-SSSLSYSPSPSSLTDMPVAPYP 395 Score = 99.4 bits (246), Expect = 9e-21 Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 6/102 (5%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPR------SLV 431 NHP R A V G + E+PER G+P CQHF+++G CKF CKYHHPR S+ Sbjct: 75 NHPRNR-APVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVT 133 Query: 430 PPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 P +L+ +G PLRP + C+Y+ R G CKFG C Y+HP Sbjct: 134 PV----SLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHP 171 Score = 78.6 bits (192), Expect = 2e-14 Identities = 34/97 (35%), Positives = 55/97 (56%) Frame = -2 Query: 538 DEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTY 359 + +PERP EP+C +++++G C + +C+++HPR+ P P R QP+C + Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQH 105 Query: 358 YERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSAQYL 248 + R G CKFG +C Y+HP G S P+S Y+ Sbjct: 106 FMRTGTCKFGASCKYHHPRQGGGGDSVT--PVSLNYM 140
>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4| Length = 404 Score = 87.8 bits (216), Expect = 3e-17 Identities = 40/96 (41%), Positives = 58/96 (60%) Frame = -2 Query: 592 NHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTAR 413 NHP + DV ++E E PER G+P+C++F+K+G CK+ CKYHHP+ Sbjct: 71 NHPTHLPQDVAYYKE----ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPV- 125 Query: 412 ALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHP 305 + +GLP+R + C YY R G C+FG AC ++HP Sbjct: 126 MFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHP 161 Score = 82.8 bits (203), Expect = 9e-16 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 1/132 (0%) Frame = -2 Query: 697 RGMYPSSEWSGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDE-YPER 521 +G P W+ PY S ++ N P Y G+ + + E Sbjct: 214 QGFLPPQGWA--------PYMAASNSMYNVK----NQPYYSGSSASMAMAVALNRGLSES 261 Query: 520 PGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGV 341 +PEC+ F+ +G CK+ CKY HP + P ++P LP RP QP C + YG Sbjct: 262 SDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGF 321 Query: 340 CKFGPACMYNHP 305 CKFGP C ++HP Sbjct: 322 CKFGPNCKFDHP 333 Score = 77.8 bits (190), Expect = 3e-14 Identities = 36/85 (42%), Positives = 51/85 (60%) Frame = -2 Query: 559 GHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRP 380 G +EL + YP+RPGE +CQ ++++G C + C+Y+HP L P A LP R Sbjct: 37 GVEEL--NPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL---PQDVAYYKEELPERI 91 Query: 379 DQPMCTYYERYGVCKFGPACMYNHP 305 QP C Y+ + G CK+GP C Y+HP Sbjct: 92 GQPDCEYFLKTGACKYGPTCKYHHP 116 Score = 44.3 bits (103), Expect = 4e-04 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLP 389 P RPG+P C +F GFCKF CK+ HP ++P P + L P Sbjct: 305 PARPGQPACGNFRSYGFCKFGPNCKFDHP--MLPYPGLTMATSLPTP 349 Score = 41.6 bits (96), Expect = 0.002 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPR 440 P R GE C +++++G C+F V CK+HHP+ Sbjct: 133 PMRLGEKPCPYYLRTGTCRFGVACKFHHPQ 162 Score = 38.9 bits (89), Expect = 0.015 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 Query: 391 PLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS 281 P RP + C +Y R G+C +G +C YNHP + V+ Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVA 81
>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2| Length = 453 Score = 73.9 bits (180), Expect = 4e-13 Identities = 38/99 (38%), Positives = 55/99 (55%) Frame = -2 Query: 538 DEYPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTY 359 D+ PER G+P+C+ +G CK+ CKYHHP+ + LGLP+R + C Y Sbjct: 83 DQLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPV-LFNVLGLPMRQGEKPCPY 137 Query: 358 YERYGVCKFGPACMYNHPFNFGHPVSAAGPPLSAQYLTS 242 Y + G+C+FG AC ++HP HP S SA ++S Sbjct: 138 YMQTGLCRFGVACKFHHP----HPHSQPSNGHSAYAMSS 172 Score = 71.6 bits (174), Expect = 2e-12 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = -2 Query: 508 ECQHFVKSGFCKFKVKCKYHHP--RSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCK 335 EC+ F+ +G CK+ CKY HP R L PPT L+P+ LP RP QP C ++ YG CK Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTL--LNPIVLPARPGQPACGNFKAYGFCK 323 Query: 334 FGPACMYNH 308 FG C ++H Sbjct: 324 FGANCKFDH 332 Score = 45.4 bits (106), Expect = 2e-04 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVP-PPTARALSPLGLPLRPDQPMCT 362 P RPG+P C +F GFCKF CK+ H L P T A+S L P P+ T Sbjct: 305 PARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPTPYPYAPPVST 361 Score = 30.4 bits (67), Expect = 5.4 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 367 CTYYERYGVCKFGPACMYNHP 305 C ++ G CK+G C Y+HP Sbjct: 267 CRFFMNTGTCKYGDDCKYSHP 287
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Frame = -2 Query: 643 PYYTPGISFHHFPAPPVNH-----PMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGF 479 P+ PG H PP H P + G +GH S + P C+HF+ G Sbjct: 862 PHDVPGHRGHDHRGPPHEHRGHDGPGHGGGGHRGHDGGHSHG-GDMSNRPVCRHFMMKGN 920 Query: 478 CKFKVKCKYHHPRSLVPP 425 C+++ C ++HP PP Sbjct: 921 CRYENNCAFYHPGVNGPP 938
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Frame = -2 Query: 643 PYYTPGISFHHFPAPPVNHPMYRGADVQGH-------QELPSDEYPERPGEPECQHFVKS 485 P+ PG H PP + +RG D GH + + P C+HF+ Sbjct: 861 PHDVPGHRGHDHRGPPPHE--HRGHDGPGHGGGGHRGHDGGHSHGGDMSNRPVCRHFMMK 918 Query: 484 GFCKFKVKCKYHHPRSLVPP 425 G C+++ C ++HP PP Sbjct: 919 GNCRYENNCAFYHPGVNGPP 938
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 7/80 (8%) Frame = -2 Query: 643 PYYTPGISFHHFPAPPVNHPMYRGADVQGH-------QELPSDEYPERPGEPECQHFVKS 485 P+ PG H PP + +RG D GH + + P C+HF+ Sbjct: 861 PHDVPGHRGHDHRGPPPHE--HRGHDGPGHGGGGHRGHDGGHSHGGDMSNRPVCRHFMMK 918 Query: 484 GFCKFKVKCKYHHPRSLVPP 425 G C+++ C ++HP PP Sbjct: 919 GNCRYENNCAFYHPGVNGPP 938
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 39.3 bits (90), Expect = 0.012 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCK----YHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 C+ F +SG CK+ KC+ +H RSL P + +C + G C Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKT------------ELCRTFHTIGFC 206 Query: 337 KFGPACMYNHPFNFGHPVSAAG 272 +GP C + H + P + G Sbjct: 207 PYGPRCHFIHNADERRPAPSGG 228
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 39.3 bits (90), Expect = 0.012 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Frame = -2 Query: 643 PYYTPGISFHHFPAPPVNHPMYRGADVQGH-------QELPSDEYPERPGEPECQHFVKS 485 P+ PG H PP + +RG D GH + + + P C+HF+ Sbjct: 846 PHDVPGHRGHDHRGPPPHE--HRGHDGPGHGGGGHRGHDGGHNHGGDMSKRPVCRHFMMK 903 Query: 484 GFCKFKVKCKYHHPRSLVPP 425 G C+++ C ++HP PP Sbjct: 904 GNCRYENNCAFYHPGVNGPP 923
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 39.3 bits (90), Expect = 0.012 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCK----YHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 C+ F +SG CK+ KC+ +H RSL P + +C + G C Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKT------------ELCRTFHTIGFC 179 Query: 337 KFGPACMYNHPFNFGHPVSAAG 272 +GP C + H + P + G Sbjct: 180 PYGPRCHFIHNADERRPAPSGG 201
>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) (Fragment) Length = 131 Score = 37.7 bits (86), Expect = 0.034 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 Query: 526 ERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 ++ P C+HF K G C+++ C ++HP + PP Sbjct: 97 DKSDRPVCRHFAKKGHCRYEDLCAFYHPGANGPP 130 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -2 Query: 385 RPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 + D+P+C ++ + G C++ C + HP A GPPL Sbjct: 98 KSDRPVCRHFAKKGHCRYEDLCAFYHP-------GANGPPL 131
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 888 Score = 37.7 bits (86), Expect = 0.034 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 6/96 (6%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLG--PYYTPGISFHHFPAPPVN----HPMYRGADVQGHQELPSDE 533 G + S E G H P G P+ P H PP + H + G +GH S Sbjct: 793 GGHRSHEGPG-HGGPHGHRPHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSHG 851 Query: 532 YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 + P C+HF+ G C+++ C ++HP PP Sbjct: 852 -GDMSNRPVCRHFMMKGNCRYENNCAFYHPGVNGPP 886
>PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 186 Score = 37.4 bits (85), Expect = 0.044 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -2 Query: 544 PSDEYP---ERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 P D P ++ P C+HF K G C+++ C ++HP PP Sbjct: 143 PKDSPPMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNGPP 185 Score = 32.0 bits (71), Expect = 1.9 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -2 Query: 406 SPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 SP + + D+P+C ++ + G C++ C + HP GPPL Sbjct: 146 SPPMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP-------GVNGPPL 186
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 37.0 bits (84), Expect = 0.058 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Frame = -2 Query: 643 PYYTPGISFHHFPAPPVN----HPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSGFC 476 P+ P H PP + H + G +GH S + P C+HF+ G C Sbjct: 795 PHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSHG-GDMSNRPVCRHFMMKGNC 853 Query: 475 KFKVKCKYHHPRSLVPP 425 +++ C ++HP PP Sbjct: 854 RYENNCAFYHPGVNGPP 870
>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 188 Score = 36.6 bits (83), Expect = 0.075 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 526 ERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 ++ P C+HF K G C+++ C ++HP PP Sbjct: 154 DKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPP 187 Score = 31.2 bits (69), Expect = 3.2 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -2 Query: 385 RPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 + D+P+C ++ + G C++ C + HP GPPL Sbjct: 155 KSDRPVCRHFAKKGHCRYEDLCAFYHP-------GVNGPPL 188
>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 188 Score = 36.6 bits (83), Expect = 0.075 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 526 ERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 ++ P C+HF K G C+++ C ++HP PP Sbjct: 154 DKSDRPVCRHFAKKGHCRYEDLCAFYHPGVNGPP 187 Score = 31.2 bits (69), Expect = 3.2 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -2 Query: 385 RPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 + D+P+C ++ + G C++ C + HP GPPL Sbjct: 155 KSDRPVCRHFAKKGHCRYEDLCAFYHP-------GVNGPPL 188
>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 190 Score = 36.2 bits (82), Expect = 0.098 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 526 ERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 ++ P C+HF K G C+++ C ++HP PP Sbjct: 156 DKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNGPP 189 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -2 Query: 406 SPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 SP + + D+P+C ++ + G C++ C + HP GPPL Sbjct: 150 SPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP-------GVNGPPL 190
>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible| protein CMG1) Length = 338 Score = 35.8 bits (81), Expect = 0.13 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKY----HHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 C+ F ++G CK+ KC++ H RSL P + +C + G C Sbjct: 120 CRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKT------------ELCRTFHTIGFC 167 Query: 337 KFGPACMYNH 308 +GP C + H Sbjct: 168 PYGPRCHFIH 177
>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)| Length = 338 Score = 35.8 bits (81), Expect = 0.13 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKY----HHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 C+ F ++G CK+ KC++ H RSL P + +C + G C Sbjct: 120 CRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKT------------ELCRTFHTIGFC 167 Query: 337 KFGPACMYNH 308 +GP C + H Sbjct: 168 PYGPRCHFIH 177
>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response| factor 1) (ERF-1) Length = 338 Score = 35.8 bits (81), Expect = 0.13 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKY----HHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 C+ F ++G CK+ KC++ H RSL P + +C + G C Sbjct: 120 CRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKT------------ELCRTFHTIGFC 167 Query: 337 KFGPACMYNH 308 +GP C + H Sbjct: 168 PYGPRCHFIH 177
>CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity factor, 30 kDa| subunit (CPSF 30 kDa subunit) (Clipper homolog) (Clipper/CPSF 30K) Length = 211 Score = 35.0 bits (79), Expect = 0.22 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLR---PDQPMCTYYERYGVCK 335 C+H+++ G CK +C++ H + P S G R + +C Y G C Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125 Query: 334 FGPACMYNHPFNFGHPV-SAAGPPLSAQ 254 GP+C + HP F P+ + PPL Q Sbjct: 126 EGPSCKFMHP-RFELPMGTTEQPPLPQQ 152
>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) (SP2) Length = 428 Score = 34.7 bits (78), Expect = 0.29 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 Query: 403 PLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHP 287 P L L +P C +Y + G C+FG C H F P Sbjct: 151 PKDLRLEKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSP 189
>ANX11_BOVIN (P27214) Annexin A11 (Annexin XI) (Calcyclin-associated annexin-50)| (CAP-50) Length = 503 Score = 34.3 bits (77), Expect = 0.37 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 15/76 (19%) Frame = -2 Query: 691 MYPSSEWSGYHQVPLG------PYYTPGISFHHFPAPPVN-------HPMYRGADVQGHQ 551 +YP + GY VP G P P S+ +P P N +P Y GA V G Sbjct: 72 LYPGAPGGGYPPVPPGGFGQPPPAQQPVPSYGMYPPPGGNPTSGMPSYPPYPGAPVPGQP 131 Query: 550 ELPSDEYPE--RPGEP 509 LP + P PG+P Sbjct: 132 MLPPGQQPPGVYPGQP 147
>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3| Length = 950 Score = 34.3 bits (77), Expect = 0.37 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 5/110 (4%) Frame = -2 Query: 577 RGADVQGHQELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYHHP----RSLVPPPTARA 410 RG + P + + P C +F+K G C C Y H ++ V + Sbjct: 700 RGTCKKTDGSCPFSHHVSKEKMPVCSYFLK-GICS-NSNCPYSHVYVSRKAEVCSDFLKG 757 Query: 409 LSPLGLPLRPDQPM-CTYYERYGVCKFGPACMYNHPFNFGHPVSAAGPPL 263 PLG + + C + R G+C G C H H A PP+ Sbjct: 758 YCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRTAAPPI 807
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 34.3 bits (77), Expect = 0.37 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -2 Query: 511 PECQHFVKSGFCKFKVKCKYHHPRSLVPP 425 P C+HF+ G C+++ C ++HP PP Sbjct: 789 PTCRHFMMKGNCRYENNCAFYHPGINGPP 817
>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III| Length = 547 Score = 33.5 bits (75), Expect = 0.64 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -2 Query: 421 TARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNH 308 TA P L ++P+C Y+ + G CKFGP C +H Sbjct: 56 TAGENCPFSHSLETERPICKYFLK-GNCKFGPKCALSH 92
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 33.5 bits (75), Expect = 0.64 Identities = 18/66 (27%), Positives = 29/66 (43%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G C+ +C + H + P T +C YY+R G C +G Sbjct: 8 CRYFLH-GVCREGSRCLFSHDLTTSKPST----------------ICKYYQR-GACAYGD 49 Query: 325 ACMYNH 308 C Y+H Sbjct: 50 RCRYDH 55
>MKRN1_MOUSE (Q9QXP6) Makorin-1| Length = 481 Score = 33.1 bits (74), Expect = 0.83 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G CK C+Y H S SP G+ +C Y++R G C +G Sbjct: 61 CRYFMH-GVCKEGDNCRYSHDLSD---------SPYGV-------VCKYFQR-GYCVYGD 102 Query: 325 ACMYNH 308 C Y H Sbjct: 103 RCRYEH 108
>KLF17_MOUSE (Q8CFA7) Krueppel-like factor 17 (Zinc finger protein 393) (Germ| cell-specific zinc finger protein) Length = 341 Score = 33.1 bits (74), Expect = 0.83 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -2 Query: 667 GYHQVPLGPYYTPG--ISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHF 494 G H +P+G T G ISF P P RG V H P+ YP P P Sbjct: 100 GSHVMPVGSSGTLGVTISFSENLMPQGGLPSSRGVSVMAHSSAPAMPYPMPPTVPATTGS 159 Query: 493 VKSG 482 +K G Sbjct: 160 LKHG 163
>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) Length = 325 Score = 33.1 bits (74), Expect = 0.83 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 10/114 (8%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C+ F +SG C++ KC++ H + P+ + +C + G C +G Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQPSRHP--------KYKTELCHKFYLQGRCPYGS 158 Query: 325 ACMYNHPFNFGHPVSAAGPP------LSAQYLTSGNY----PV*QAGQSFFLWS 194 C + H N ++A G P +S L SG P AG S WS Sbjct: 159 RCHFIH--NPSEDLAAPGHPHVLRQSISFSGLPSGRRTSPPPASLAGPSVPSWS 210
>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)| Length = 423 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G C+ +C + H + P T +C +Y+R GVC +G Sbjct: 8 CRYFLH-GVCREGSRCLFSHDLNNSKPST----------------ICKFYQR-GVCAYGE 49 Query: 325 ACMYNH 308 C Y+H Sbjct: 50 RCRYDH 55
>SCP3_SCHPO (P41000) Protein scp3| Length = 583 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 6/102 (5%) Frame = -2 Query: 523 RPGEPECQH----FVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYY 356 RP QH F + G C C + H L L ++ +C Y+ Sbjct: 30 RPSPKSLQHVPCKFFRQGTCTSGKNCIFSHD----------------LELATEKTICKYF 73 Query: 355 ERYGVCKFGPACMYNHPFNFGHPVS--AAGPPLSAQYLTSGN 236 ++ G CKFG C H G V A P +A +S N Sbjct: 74 QK-GNCKFGSKCALEHVLPDGRKVKTRAFAPSTTAMGSSSQN 114
>YTH1_YEAST (Q06102) Protein YTH1| Length = 208 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 2/70 (2%) Frame = -2 Query: 511 PECQHFVKSGFCKFKVKCKYHH--PRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVC 338 PEC F K+G+C C+Y H P S + P C YE G C Sbjct: 93 PECVFFSKNGYCTQSPDCQYLHIDPASKI-------------------PKCENYE-MGFC 132 Query: 337 KFGPACMYNH 308 G +C H Sbjct: 133 PLGSSCPRRH 142
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 32.3 bits (72), Expect = 1.4 Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 18/124 (14%) Frame = -2 Query: 688 YPSSEWSGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQG-HQELPSDEYPERPGE 512 YP++ H P+ P Y G H PA YR H L + P P Sbjct: 250 YPATPNHSLHPQPVTPSYAAGDVPPHGPASQAAEHEYRPPSASARHMALNRPQQPPPPPP 309 Query: 511 PECQHFVKS---------GFCKFKVKCKYHHPRSLVPPPTARAL--------SPLGLPLR 383 P+ ++ G ++ +Y++P PPP + SPL +P++ Sbjct: 310 PQAPEGSQASAPMAPADYGMLPAQI-IEYYNPSGPPPPPPPPVIPSAQTAFVSPLQMPMQ 368 Query: 382 PDQP 371 P P Sbjct: 369 PPFP 372
>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) Length = 462 Score = 32.3 bits (72), Expect = 1.4 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -2 Query: 388 LRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHP 287 L D+ C +Y + G C+FG C H F P Sbjct: 169 LEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSP 202
>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)| Length = 416 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/78 (26%), Positives = 34/78 (43%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G C+ +C + H + P T +C YY++ G C +G Sbjct: 8 CRYFMH-GVCREGSQCLFSHDLANSKPST----------------ICKYYQK-GYCAYGT 49 Query: 325 ACMYNHPFNFGHPVSAAG 272 C Y+H P +AAG Sbjct: 50 RCRYDHT----RPSAAAG 63
>MKRN1_MACEU (Q9TT91) Makorin-1| Length = 478 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G CK C+Y H S T+++ +C YY+R G C +G Sbjct: 57 CRYFMH-GVCKKGNNCRYSHDLS-----TSQSAM-----------VCRYYQR-GCCAYGD 98 Query: 325 ACMYNH 308 C Y H Sbjct: 99 RCRYEH 104
>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1| Length = 404 Score = 32.3 bits (72), Expect = 1.4 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRP--DQPMCTYYERYGVCKF 332 C+++ SG C++ KC++ H + P P P C + YG C + Sbjct: 332 CKNWQISGTCRYGSKCQFAHGNQELKEP----------PRHPKYKSERCRSFMMYGYCPY 381 Query: 331 GPACMYNH 308 G C + H Sbjct: 382 GLRCCFLH 389
>CTH1_YEAST (P47976) Zinc finger protein CTH1| Length = 325 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQ---PMCTYYERYGVCK 335 C+ F G+CK+ KC++ H L+ L + + C + + G C Sbjct: 210 CESFTIKGYCKYGNKCQFAH-----------GLNELKFKKKSNNYRTKPCINWSKLGYCP 258 Query: 334 FGPACMYNH 308 +G C + H Sbjct: 259 YGKRCCFKH 267
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 32.0 bits (71), Expect = 1.9 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 1/101 (0%) Frame = -2 Query: 529 PERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYER 350 P R C+ F +SG C++ KC++ H L + +C + Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAHGLG--------ELRQANRHPKYKTELCHKFYL 152 Query: 349 YGVCKFGPACMYNHPFNFGHPVSAAG-PPLSAQYLTSGNYP 230 G C +G C + H N ++A G PP+ Q ++ P Sbjct: 153 QGRCPYGSRCHFIH--NPSEDLAAPGHPPVLRQSISFSGLP 191
>TIS1_DROME (P47980) Protein TIS11 (dTIS11)| Length = 436 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/66 (24%), Positives = 28/66 (42%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C+ F ++G CK+ KC++ H + L + + C + G C +GP Sbjct: 141 CRPFEEAGECKYGEKCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGP 192 Query: 325 ACMYNH 308 C + H Sbjct: 193 RCHFVH 198 Score = 30.4 bits (67), Expect = 5.4 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 9/37 (24%) Frame = -2 Query: 391 PLRPDQPM---------CTYYERYGVCKFGPACMYNH 308 PL P QPM C +E G CK+G C + H Sbjct: 124 PLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAH 160
>MKRN2_MOUSE (Q9ERV1) Makorin-2| Length = 416 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/78 (26%), Positives = 34/78 (43%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G C+ +C + H + P T +C YY++ G C +G Sbjct: 8 CRYFMH-GVCREGSQCLFSHDLANSKPST----------------ICKYYQK-GYCAYGA 49 Query: 325 ACMYNHPFNFGHPVSAAG 272 C Y+H P +AAG Sbjct: 50 RCRYDHT----KPPAAAG 63
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 32.0 bits (71), Expect = 1.9 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 10/58 (17%) Frame = -2 Query: 661 HQVP-------LGPYYTPGISFHHFPAPPVNH-PMY--RGADVQGHQELPSDEYPERP 518 HQ+P +GP Y PG FHH P+ PV H PM G +Q H LP + P Sbjct: 1484 HQIPNMSMHQQMGPQY-PGAVFHH-PSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPAP 1539
>DLL2_XENLA (P53774) Homeobox protein DLL-2 (XDLL-2)| Length = 277 Score = 32.0 bits (71), Expect = 1.9 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQE-LPSDEY 530 G Y +G H Y+P IS + +P PP HP Y + G++ LP D+Y Sbjct: 38 GYYNGHLSTGQHDFFQTQAYSPTISSYGYPHPP--HPQYNFNGLVGNESFLPKDDY 91
>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit-related protein 1 (U2(RNU2) small nuclear RNA auxillary factor 1-like 1) Length = 479 Score = 31.6 bits (70), Expect = 2.4 Identities = 11/34 (32%), Positives = 16/34 (47%) Frame = -2 Query: 388 LRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHP 287 + D+ C +Y + G C+FG C H F P Sbjct: 170 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSP 203
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 31.6 bits (70), Expect = 2.4 Identities = 11/34 (32%), Positives = 16/34 (47%) Frame = -2 Query: 388 LRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHP 287 + D+ C +Y + G C+FG C H F P Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSP 198
>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)| Length = 482 Score = 31.2 bits (69), Expect = 3.2 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C++F+ G CK C+Y H L P +C Y++R G C +G Sbjct: 61 CRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVCKYFQR-GYCIYGD 102 Query: 325 ACMYNH 308 C Y H Sbjct: 103 RCRYEH 108
>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) Length = 324 Score = 30.8 bits (68), Expect = 4.1 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 10/114 (8%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C+ F +SG C++ KC++ H L + +C + G C +G Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLG--------ELRQASRHPKYKTELCHKFYLQGRCPYGS 158 Query: 325 ACMYNHPFNFGHPVSAAGPP------LSAQYLTSGNY----PV*QAGQSFFLWS 194 C + H N ++A G P +S L SG P AG S WS Sbjct: 159 RCHFIH--NPSEDLAAPGHPHVLRQSISFSGLPSGRRTSPPPASLAGPSVSSWS 210
>HOG1_HORVU (P17990) Gamma-hordein-1 precursor| Length = 305 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Frame = -2 Query: 664 YHQVPLGPYYTPGISF----------HHFPAPPVNHPMYRGADVQGHQELPSDEYPERPG 515 + Q PL P+ P ++F FP PP ++P +Q + P +YPE+P Sbjct: 89 FPQRPLLPFTHPFLTFPDQLLPQPPHQSFPQPPQSYPQ---PPLQPFPQPPQQKYPEQPQ 145 Query: 514 EP 509 +P Sbjct: 146 QP 147
>ANX11_MOUSE (P97384) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)| (CAP-50) Length = 503 Score = 30.8 bits (68), Expect = 4.1 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 15/76 (19%) Frame = -2 Query: 691 MYPSSEWSGYHQVPLG------PYYTPGISFHHFPAPPVN-------HPMYRGADVQGHQ 551 +YP + GY VP G P P + +P P N +P Y GA V G Sbjct: 72 LYPGAPGGGYPPVPPGGFGQPPPAQQPVPPYGMYPPPGGNPPPGMPSYPAYPGAPVPGQP 131 Query: 550 ELPSDEYP--ERPGEP 509 P+ + P PG+P Sbjct: 132 MPPTGQQPPGAYPGQP 147
>EXTN1_ARATH (Q38913) Extensin-1 precursor (AtExt1) (AtExt4)| Length = 373 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/103 (26%), Positives = 35/103 (33%) Frame = -2 Query: 664 YHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKS 485 YH P +Y+P +H P PPV+ Y V H P ++ E P H Sbjct: 287 YHSPPPPVHYSPPPVVYHSPPPPVH---YSPPPVVYHSPPPPKKHYEYKSPPPPVH---- 339 Query: 484 GFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYY 356 + YH PPP SP P P +Y Sbjct: 340 ----YSPPTVYHS-----PPPPVHHYSPPHQPYLYKSPPPPHY 373
>CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity factor, 30 kDa| subunit (CPSF 30 kDa subunit) (NS1 effector domain-binding protein 1) (Neb-1) (No arches homolog) Length = 269 Score = 30.4 bits (67), Expect = 5.4 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 8/94 (8%) Frame = -2 Query: 511 PECQHFVKSGFCKFKVKCKYHH--PRSLVP--PPTARAL---SPLGLPLRPDQPMCTYYE 353 PEC + K G C K +C + H P S + P R PL + +C Y Sbjct: 94 PECYFYSKFGECSNK-ECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151 Query: 352 RYGVCKFGPACMYNHPFNFGHPV-SAAGPPLSAQ 254 G C GP+C + HP F P+ + PPL Q Sbjct: 152 LVGFCPEGPSCKFMHP-RFELPMGTTEQPPLPQQ 184
>SIN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1282 Score = 30.4 bits (67), Expect = 5.4 Identities = 31/127 (24%), Positives = 44/127 (34%) Frame = -2 Query: 661 HQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSG 482 HQ+P T GI P PP HP PS + P +P Q Sbjct: 209 HQIP-----THGIQPQ--PQPPPQHPSQ-----------PSSQSAPTPAQPAPQPTAAKV 250 Query: 481 FCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPF 302 +++ H P S PP SP P++P P+ P+ N P Sbjct: 251 SKPSQLQA--HTPASQQTPPLPPYASPRSPPVQPHTPVTISLGT------APSLQNNQPV 302 Query: 301 NFGHPVS 281 +F H ++ Sbjct: 303 HFNHAIN 309
>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)| Length = 285 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/66 (24%), Positives = 26/66 (39%) Frame = -2 Query: 505 CQHFVKSGFCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGP 326 C+ F G C + KC++ H + S +P C +E+ G C +G Sbjct: 175 CESFTLKGSCPYGSKCQFAHGLGELKVKK----SCKNFRTKP----CVNWEKLGYCPYGR 226 Query: 325 ACMYNH 308 C + H Sbjct: 227 RCCFKH 232
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 436 LVPPPTARALSPLGLPLRPDQP 371 L P PTA +LS +GLPL+P P Sbjct: 179 LPPKPTAFSLSRIGLPLKPTNP 200
>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1273 Score = 30.0 bits (66), Expect = 7.1 Identities = 33/127 (25%), Positives = 44/127 (34%) Frame = -2 Query: 661 HQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFVKSG 482 HQ+P T GI P PP HP A Q P+ P P P + S Sbjct: 209 HQIP-----THGIQPQ--PQPPPQHPSQPSA-----QSAPAPAQPA-PQPPPAKVSKPS- 254 Query: 481 FCKFKVKCKYHHPRSLVPPPTARALSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPF 302 + + H P S PP SP P++P P+ P+ N P Sbjct: 255 ------QLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGT------APSLQNNQPV 302 Query: 301 NFGHPVS 281 F H ++ Sbjct: 303 EFNHAIN 309
>STON1_HUMAN (Q9Y6Q2) Stonin-1 (Stoned B-like factor)| Length = 735 Score = 29.6 bits (65), Expect = 9.2 Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 5/107 (4%) Frame = -2 Query: 670 SGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERPGEPECQHFV 491 SG P +P + F+ P PP N P+ P+ ++P PG P+ V Sbjct: 52 SGSSSTSSTPLSSPIVDFYFSPGPPSNSPL----------STPTKDFPGFPGIPKAGTHV 101 Query: 490 KSGFCKFKVKCKYHHPRSLVPPPTARALSPLGL-----PLRPDQPMC 365 L P P + + SPL + L P +P C Sbjct: 102 ------------------LYPIPESSSDSPLAISGGESSLLPTRPTC 130
>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog| Length = 242 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -2 Query: 694 GMYPSSEWSGYHQVPLGPYYTPGISFHHFPAPPVNHPMYRGADVQGHQELPSDEYPERP 518 GMYPS +G P GP+ PG S P P P G G P+ PE P Sbjct: 71 GMYPSMPPTGPPPGPPGPFPPPGPSCPP-PGVPYPAPAVPGPGPTGPYATPNMPMPELP 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,107,755 Number of Sequences: 219361 Number of extensions: 2413052 Number of successful extensions: 6042 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 5578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5968 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
