Clone Name | rbasd18d08 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
---|---|---|---|
1 | LEU3_BACSK (Q5WEN4) 3-isopropylmalate dehydrogenase (EC 1.1.1.85... | 31 | 2.8 |
>LEU3_BACSK (Q5WEN4) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 364 Score = 31.2 bits (69), Expect = 2.8 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Frame = +1 Query: 217 YIKMFLLVDGRSGPGISSIYATPFPTRTAELNNSYLTRLLSSV--PRFGGNR-----EDA 375 Y F V+GR G +P P T +L LL +V P++ GN E Sbjct: 32 YHHTFQFVEGRIGGDAIDATGSPLPEETLDLAKGSDAILLGAVGGPKWDGNAPEKRPEKG 91 Query: 376 LLQMCNLA*TIARDKPVSTLNVL--ANTMKSDI 468 LLQ+ A +PV L L A+T+K ++ Sbjct: 92 LLQIRKALGLYANLRPVRVLKPLMGASTLKEEV 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,924,816 Number of Sequences: 219361 Number of extensions: 2011583 Number of successful extensions: 3605 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 3530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3605 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)