ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK061883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 587 e-164
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 587 e-164
3dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 587 e-164
4dbj|AK120672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 587 e-164
5dbj|AK120106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 587 e-164
6dbj|AK067542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 587 e-164
7ref|NM_189401.1| Oryza sativa (japonica cultivar-group), predic... 581 e-162
8gb|AY111552.1| Zea mays CL47233_1 mRNA sequence 264 4e-67
9gb|DQ317314.1| Musa acuminata putative 5-oxoprolinase mRNA, part... 184 3e-43
10ref|NM_123142.3| Arabidopsis thaliana catalytic/ hydrolase AT5G3... 98 5e-17
11gb|AY102096.1| Arabidopsis thaliana AT5g37830/K22F20_70 mRNA, co... 98 5e-17
12gb|BT004510.1| Arabidopsis thaliana At5g37830/K22F20_70 gene, co... 98 5e-17
13dbj|AB016873.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 98 5e-17
14gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete se... 84 7e-13
15ref|XM_390379.1| Gibberella zeae PH-1 chromosome 1 conserved hyp... 48 0.039
16emb|Z68166.1|SPAC11D3 S.pombe chromosome I cosmid c11D3 46 0.16
17ref|NM_001018209.1| Schizosaccharomyces pombe 972h- hypothetical... 46 0.16
18gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 patho... 44 0.62
19gb|AC154848.2| Mus musculus BAC clone RP23-38J19 from 13, comple... 44 0.62
20gb|AC133159.3| Mus musculus BAC clone RP24-503F11 from 13, compl... 44 0.62
21gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, co... 42 2.4
22gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, c... 42 2.4
23emb|AL356915.19| Human DNA sequence from clone RP11-179F17 on ch... 42 2.4
24emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome;... 42 2.4
25emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chr... 42 2.4
26gb|AC016394.13| Homo sapiens chromosome 10 clone RP11-152N13, co... 42 2.4
27ref|XM_682310.1| PREDICTED: Danio rerio similar to calcium chann... 42 2.4
28gb|BC085330.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysing... 40 9.6
29gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.6
30ref|NM_153122.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing) (... 40 9.6
31gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, com... 40 9.6
32gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, comp... 40 9.6
33gb|BC079754.1| Xenopus laevis MGC84754 protein, mRNA (cDNA clone... 40 9.6
34gb|BC034522.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing), mR... 40 9.6
35gb|BC072530.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysing... 40 9.6
36gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493... 40 9.6
37ref|XM_539206.2| PREDICTED: Canis familiaris similar to 5-oxopro... 40 9.6
38ref|XM_572999.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 9.6
39ref|XM_804477.1| Trypanosoma cruzi strain CL Brener 5-oxoprolina... 40 9.6
40ref|XM_800645.1| Trypanosoma cruzi strain CL Brener 5-oxoprolina... 40 9.6
41gb|BC025120.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing), mR... 40 9.6
42emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in ... 40 9.6
43ref|XM_500125.1| Yarrowia lipolytica CLIB122, YALI0A16291g predi... 40 9.6
44emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 9.6
45emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 40 9.6
46emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 40 9.6
47emb|AL645845.14| Mouse DNA sequence from clone RP23-338J18 on ch... 40 9.6
48emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 i... 40 9.6
49emb|BX088708.14| Zebrafish DNA sequence from clone CH211-196B14 ... 40 9.6
50ref|NM_053904.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysi... 40 9.6
51gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Can... 40 9.6
52gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Canc... 40 9.6
53gb|AC105107.5| Homo sapiens chromosome 8, clone CTD-3103L12, com... 40 9.6
54gb|DQ302024.1| Uncultured archaeon clone 4H3_ar23 16S ribosomal ... 40 9.6
55dbj|AK164524.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 9.6
56gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, com... 40 9.6
57emb|BX294104.7| Zebrafish DNA sequence from clone CH211-245I22 i... 40 9.6
58dbj|AK130924.1| Homo sapiens cDNA FLJ27414 fis, clone WMC05333 40 9.6
59emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 9.6
60gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, co... 40 9.6
61gb|U70825.1|RRU70825 Rattus norvegicus 5-oxo-L-prolinase mRNA, c... 40 9.6
62emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 9.6
63emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chr... 40 9.6
64emb|AL358332.3|CNS05TE3 Human chromosome 14 DNA sequence BAC R-2... 40 9.6

>dbj|AK061883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F02, full
            insert sequence
          Length = 1381

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Minus

                                                                        
Query: 126  ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
            |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 1193 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 1134

                                                                        
Query: 186  attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
            ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 1133 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 1074

                                                                        
Query: 246  atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
            ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 1073 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcaccct 1014

                                                                        
Query: 306  cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
             ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 1013 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 954

                                                                        
Query: 366  atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
            |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 953  atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 894

                                                                        
Query: 426  aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
            |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 893  aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 834

                                                                        
Query: 486  acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
            ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 833  acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 774

                                                                        
Query: 546  ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
            ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 773  ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 714

                                                                        
Query: 606  ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
            ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 713  ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 654

                                                
Query: 666  accaccaaccactgcagccttgtcacttggtgaaag 701
            |||||||||||||||||| ||||||||||| |||||
Sbjct: 653  accaccaaccactgcagctttgtcacttggagaaag 618



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Plus

                                                                            
Query: 126      ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
                |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 42586004 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 42586063

                                                                            
Query: 186      attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
                ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 42586064 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 42586123

                                                                            
Query: 246      atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
                ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 42586124 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcaccct 42586183

                                                                            
Query: 306      cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
                 ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 42586184 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 42586243

                                                                            
Query: 366      atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
                |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 42586244 atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 42586303

                                                                            
Query: 426      aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
                |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42586304 aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 42586363

                                                                            
Query: 486      acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
                ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 42586364 acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 42586423

                                                                            
Query: 546      ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
                ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 42586424 ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 42586483

                                                                            
Query: 606      ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
                ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 42586484 ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 42586543

                                                    
Query: 666      accaccaaccactgcagccttgtcacttggtgaaag 701
                |||||||||||||||||| ||||||||||| |||||
Sbjct: 42586544 accaccaaccactgcagctttgtcacttggagaaag 42586579



to top

>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Plus

                                                                          
Query: 126    ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
              |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 106887 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 106946

                                                                          
Query: 186    attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
              ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 106947 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 107006

                                                                          
Query: 246    atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
              ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 107007 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcaccct 107066

                                                                          
Query: 306    cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
               ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 107067 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 107126

                                                                          
Query: 366    atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
              |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 107127 atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 107186

                                                                          
Query: 426    aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
              |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 107187 aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 107246

                                                                          
Query: 486    acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
              ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 107247 acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 107306

                                                                          
Query: 546    ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
              ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 107307 ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 107366

                                                                          
Query: 606    ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
              ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 107367 ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 107426

                                                  
Query: 666    accaccaaccactgcagccttgtcacttggtgaaag 701
              |||||||||||||||||| ||||||||||| |||||
Sbjct: 107427 accaccaaccactgcagctttgtcacttggagaaag 107462



to top

>dbj|AK120672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160L10, full
            insert sequence
          Length = 4082

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Minus

                                                                        
Query: 126  ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
            |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 1584 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 1525

                                                                        
Query: 186  attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
            ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 1524 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 1465

                                                                        
Query: 246  atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
            ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 1464 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcaccct 1405

                                                                        
Query: 306  cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
             ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 1404 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 1345

                                                                        
Query: 366  atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
            |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 1344 atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 1285

                                                                        
Query: 426  aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
            |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1284 aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 1225

                                                                        
Query: 486  acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
            ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 1224 acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 1165

                                                                        
Query: 546  ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
            ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 1164 ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 1105

                                                                        
Query: 606  ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
            ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 1104 ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 1045

                                                
Query: 666  accaccaaccactgcagccttgtcacttggtgaaag 701
            |||||||||||||||||| ||||||||||| |||||
Sbjct: 1044 accaccaaccactgcagctttgtcacttggagaaag 1009



to top

>dbj|AK120106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023K07, full
            insert sequence
          Length = 5354

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Minus

                                                                        
Query: 126  ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
            |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 4008 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 3949

                                                                        
Query: 186  attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
            ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 3948 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 3889

                                                                        
Query: 246  atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
            ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 3888 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcaccct 3829

                                                                        
Query: 306  cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
             ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 3828 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 3769

                                                                        
Query: 366  atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
            |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 3768 atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 3709

                                                                        
Query: 426  aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
            |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3708 aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 3649

                                                                        
Query: 486  acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
            ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 3648 acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 3589

                                                                        
Query: 546  ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
            ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 3588 ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 3529

                                                                        
Query: 606  ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
            ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 3528 ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 3469

                                                
Query: 666  accaccaaccactgcagccttgtcacttggtgaaag 701
            |||||||||||||||||| ||||||||||| |||||
Sbjct: 3468 accaccaaccactgcagctttgtcacttggagaaag 3433



to top

>dbj|AK067542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L13, full
            insert sequence
          Length = 4080

 Score =  587 bits (296), Expect = e-164
 Identities = 506/576 (87%)
 Strand = Plus / Minus

                                                                        
Query: 126  ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
            |||||||||||| || ||||| || ||||| |||||||| |||||||||| |||||||||
Sbjct: 3975 ccatcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagc 3916

                                                                        
Query: 186  attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
            ||||||  | || || ||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 3915 attaaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgag 3856

                                                                        
Query: 246  atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
            ||||||||| ||||| || ||||||   ||||||||||||||||||||||||||||||| 
Sbjct: 3855 atagtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcacccc 3796

                                                                        
Query: 306  cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
             ||||| |||||||||||||||||||||||| |||  ||||||||||| || ||||||||
Sbjct: 3795 tctctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggcc 3736

                                                                        
Query: 366  atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
            |||||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || ||
Sbjct: 3735 atcaccacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaa 3676

                                                                        
Query: 426  aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
            |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3675 aagaacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtg 3616

                                                                        
Query: 486  acactgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggt 545
            ||||||||||||||||||||||| |||  ||| ||| || ||  | || ||||| |||||
Sbjct: 3615 acactgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggt 3556

                                                                        
Query: 546  ctcatagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagca 605
            ||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||| |||||
Sbjct: 3555 ctcatagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagca 3496

                                                                        
Query: 606  ggcacaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacatt 665
            ||| || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || |||||
Sbjct: 3495 ggcgcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacatt 3436

                                                
Query: 666  accaccaaccactgcagccttgtcacttggtgaaag 701
            |||||||||||||||||| ||||||||||| |||||
Sbjct: 3435 accaccaaccactgcagctttgtcacttggagaaag 3400



to top

>ref|NM_189401.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3774

 Score =  581 bits (293), Expect = e-162
 Identities = 503/573 (87%)
 Strand = Plus / Minus

                                                                        
Query: 129  tcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagcatt 188
            ||||||||| || ||||| || ||||| |||||||| |||||||||| ||||||||||||
Sbjct: 3774 tcaaggagagccaaaaccaccaccaccaggagtgagaatctgaagaatctcaccagcatt 3715

                                                                        
Query: 189  aactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactagata 248
            |||  | || || ||||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 3714 aaccataacagtgttcttccctccaaggtaaactctacgaccatctttcttgacgagata 3655

                                                                        
Query: 249  gtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccgcct 308
            |||||| ||||| || ||||||   |||||||||||||||||||||||||||||||  ||
Sbjct: 3654 gtttgcaccacgggccccatttcttcctcccttcagtcccctgggagcatgcacccttct 3595

                                                                        
Query: 309  ctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggccatc 368
            ||| |||||||||||||||||||||||| |||  ||||||||||| || |||||||||||
Sbjct: 3594 ctctgaaagaatgctcacaacaacaggctggcaaaattcaatctctctcacaaggccatc 3535

                                                                        
Query: 369  accgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaaaag 428
            ||| |||| ||||| |||||| ||||| ||| | || |||||||||||||| || |||||
Sbjct: 3534 accacctctgtggaaaccagaacctccactgttctccctgatgctaaatctatgtaaaag 3475

                                                                        
Query: 429  aacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgaca 488
            ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3474 aacagggtatcgctgctcaaagatctctgggtcagtcatccttgtgtttgtcatgtgaca 3415

                                                                        
Query: 489  ctgaacaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggtctc 548
            |||||||||||||||||||| |||  ||| ||| || ||  | || ||||| ||||||||
Sbjct: 3414 ctgaacaccacttgtaccatcccaactcgccccagctcctgaaccgcctccaatggtctc 3355

                                                                        
Query: 549  atagtaaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggc 608
            |||||||||||| ||||| |||||||| |||| |||||||||||| ||||| ||||||||
Sbjct: 3354 atagtaaccgaaggtgtcgtctccaaatgtcaaattgttcatgcaaccctgggagcaggc 3295

                                                                        
Query: 609  acaggcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacattacc 668
             || |||| ||| ||||||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct: 3294 gcatgcttggaaagccattaggactacgtccgtcactctctgagaggtcaatacattacc 3235

                                             
Query: 669  accaaccactgcagccttgtcacttggtgaaag 701
            ||||||||||||||| ||||||||||| |||||
Sbjct: 3234 accaaccactgcagctttgtcacttggagaaag 3202



to top

>gb|AY111552.1| Zea mays CL47233_1 mRNA sequence
          Length = 700

 Score =  264 bits (133), Expect = 4e-67
 Identities = 312/372 (83%)
 Strand = Plus / Plus

                                                                       
Query: 126 ccatcaaggagaaccgaaaccgccgccaccgggagtgaggatctgaagaacctcaccagc 185
           |||||||||| | || || || ||||||||||| ||||  |||||||| |  ||||||||
Sbjct: 296 ccatcaaggacagccaaagccaccgccaccgggcgtgaaaatctgaaggatatcaccagc 355

                                                                       
Query: 186 attaactgtgacggtattcttccctccaaggtaaactctgcgaccatctttcctgactag 245
           | | || || || || ||||| |||||||||||||   | | ||||||||  ||||||| 
Sbjct: 356 actgaccgttacagtgttctttcctccaaggtaaatctttctaccatcttctctgactaa 415

                                                                       
Query: 246 atagtttgcgccacgagctccattttcccctcccttcagtcccctgggagcatgcacccg 305
           ||||||||| |||||| |||||| |   ||||| || |||||||||||||||||||||||
Sbjct: 416 atagtttgcaccacgatctccatctcgtcctcctttgagtcccctgggagcatgcacccg 475

                                                                       
Query: 306 cctctcagaaagaatgctcacaacaacaggccggcggaattcaatctcccttacaaggcc 365
            |||||||| |||| ||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 476 tctctcagatagaacgctcacaacaataggccgccggaactcaatctcccttacaaggcc 535

                                                                       
Query: 366 atcaccgcctcggtggagaccagagcctccgctgctgtctctgatgctaaatctgtgcaa 425
           |||||| |||| ||| | |||||| ||||| ||| | || |||||||||||| |||||| 
Sbjct: 536 atcaccacctctgtgtaaaccagaacctccactgttctccctgatgctaaatgtgtgcag 595

                                                                       
Query: 426 aagaacgggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtg 485
           |||  |  | || ||||||||||||||||| || ||||||||||||| ||||||||||||
Sbjct: 596 aagggctcggtaccgctgctcaaagatctcagggtcagtcatccttgngtttgtcatgtg 655

                       
Query: 486 acactgaacacc 497
           ||||||||||||
Sbjct: 656 acactgaacacc 667



to top

>gb|DQ317314.1| Musa acuminata putative 5-oxoprolinase mRNA, partial cds
          Length = 759

 Score =  184 bits (93), Expect = 3e-43
 Identities = 225/269 (83%)
 Strand = Plus / Minus

                                                                       
Query: 433 ggatatcgctgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactga 492
           ||||| ||||| ||||| || |||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 422 ggataccgctgttcaaatatttctggatccgtcatcctagtgttggtcatgtggcactga 363

                                                                       
Query: 493 acaccacttgtaccattccaggtcggcccggcgccacagccacctccgatggtctcatag 552
           |  ||||| || |||| ||| ||||| || || ||||  |||||||||||||||||||||
Sbjct: 362 attccactggttccatcccaagtcggtcctgcaccactcccacctccgatggtctcatag 303

                                                                       
Query: 553 taaccgaaagtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggcacag 612
           ||||| |||||||| || ||||||||||| || |||||||| |||||||||||||| || 
Sbjct: 302 taaccaaaagtgtcatcgccaaaggtcaggttattcatgcaaccctgagagcaggcgcat 243

                                                                       
Query: 613 gcttcgaatgccattaggacaacgtctgtcaccctctgagaggttaacacattaccacca 672
           || | ||||||  |||| | ||| ||||| |  ||||||||||| |  ||||| ||||||
Sbjct: 242 gcctggaatgcagttagaataacatctgttattctctgagaggtaagtacattgccacca 183

                                        
Query: 673 accactgcagccttgtcacttggtgaaag 701
           || || || ||||||||||||||||||||
Sbjct: 182 actacggctgccttgtcacttggtgaaag 154



to top

>ref|NM_123142.3| Arabidopsis thaliana catalytic/ hydrolase AT5G37830 mRNA, complete
            cds
          Length = 4218

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 169/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 442  tgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactgaacaccactt 501
            |||||||||||||| |||||||||||||  ||||| ||||| || || || || || |||
Sbjct: 3588 tgctcaaagatctcgggatcagtcatccgcgtgttagtcatatggcattggactccgctt 3529

                                                                        
Query: 502  gtaccattccaggtcggcccggcgccacagccacctccgatggtctcatagtaaccgaaa 561
            || || ||||| || || ||||| || || ||||| || |||||||| ||||| || || 
Sbjct: 3528 gtcccgttccatgtgggtccggctccgcatccaccaccaatggtctcgtagtacccaaat 3469

                                                                        
Query: 562  gtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggcacaggcttcgaat 621
            ||||| |||||||| || |||||||||||||| || || || || ||||| || | ||||
Sbjct: 3468 gtgtcgtctccaaatgtgagattgttcatgcatccttgggaacaagcacaagcctggaat 3409

                                         
Query: 622  gccattaggacaacgtctgtcaccctctg 650
            ||  |||||||||| ||||| || |||||
Sbjct: 3408 gctgttaggacaacatctgtaactctctg 3380



to top

>gb|AY102096.1| Arabidopsis thaliana AT5g37830/K22F20_70 mRNA, complete cds
          Length = 4171

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 169/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 442  tgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactgaacaccactt 501
            |||||||||||||| |||||||||||||  ||||| ||||| || || || || || |||
Sbjct: 3588 tgctcaaagatctcgggatcagtcatccgcgtgttagtcatatggcattggactccgctt 3529

                                                                        
Query: 502  gtaccattccaggtcggcccggcgccacagccacctccgatggtctcatagtaaccgaaa 561
            || || ||||| || || ||||| || || ||||| || |||||||| ||||| || || 
Sbjct: 3528 gtcccgttccatgtgggtccggctccgcatccaccaccaatggtctcgtagtacccaaat 3469

                                                                        
Query: 562  gtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggcacaggcttcgaat 621
            ||||| |||||||| || |||||||||||||| || || || || ||||| || | ||||
Sbjct: 3468 gtgtcgtctccaaatgtgagattgttcatgcatccttgggaacaagcacaagcctggaat 3409

                                         
Query: 622  gccattaggacaacgtctgtcaccctctg 650
            ||  |||||||||| ||||| || |||||
Sbjct: 3408 gctgttaggacaacatctgtaactctctg 3380



to top

>gb|BT004510.1| Arabidopsis thaliana At5g37830/K22F20_70 gene, complete cds
          Length = 3801

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 169/209 (80%)
 Strand = Plus / Minus

                                                                        
Query: 442  tgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactgaacaccactt 501
            |||||||||||||| |||||||||||||  ||||| ||||| || || || || || |||
Sbjct: 3485 tgctcaaagatctcgggatcagtcatccgcgtgttagtcatatggcattggactccgctt 3426

                                                                        
Query: 502  gtaccattccaggtcggcccggcgccacagccacctccgatggtctcatagtaaccgaaa 561
            || || ||||| || || ||||| || || ||||| || |||||||| ||||| || || 
Sbjct: 3425 gtcccgttccatgtgggtccggctccgcatccaccaccaatggtctcgtagtacccaaat 3366

                                                                        
Query: 562  gtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggcacaggcttcgaat 621
            ||||| |||||||| || |||||||||||||| || || || || ||||| || | ||||
Sbjct: 3365 gtgtcgtctccaaatgtgagattgttcatgcatccttgggaacaagcacaagcctggaat 3306

                                         
Query: 622  gccattaggacaacgtctgtcaccctctg 650
            ||  |||||||||| ||||| || |||||
Sbjct: 3305 gctgttaggacaacatctgtaactctctg 3277



to top

>dbj|AB016873.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K22F20
          Length = 64827

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 169/209 (80%)
 Strand = Plus / Plus

                                                                         
Query: 442   tgctcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactgaacaccactt 501
             |||||||||||||| |||||||||||||  ||||| ||||| || || || || || |||
Sbjct: 58793 tgctcaaagatctcgggatcagtcatccgcgtgttagtcatatggcattggactccgctt 58852

                                                                         
Query: 502   gtaccattccaggtcggcccggcgccacagccacctccgatggtctcatagtaaccgaaa 561
             || || ||||| || || ||||| || || ||||| || |||||||| ||||| || || 
Sbjct: 58853 gtcccgttccatgtgggtccggctccgcatccaccaccaatggtctcgtagtacccaaat 58912

                                                                         
Query: 562   gtgtcctctccaaaggtcagattgttcatgcagccctgagagcaggcacaggcttcgaat 621
             ||||| |||||||| || |||||||||||||| || || || || ||||| || | ||||
Sbjct: 58913 gtgtcgtctccaaatgtgagattgttcatgcatccttgggaacaagcacaagcctggaat 58972

                                          
Query: 622   gccattaggacaacgtctgtcaccctctg 650
             ||  |||||||||| ||||| || |||||
Sbjct: 58973 gctgttaggacaacatctgtaactctctg 59001



to top

>gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete sequence
          Length = 107710

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 120/146 (82%)
 Strand = Plus / Plus

                                                                         
Query: 445   tcaaagatctctggatcagtcatccttgtgtttgtcatgtgacactgaacaccacttgta 504
             ||||| ||||||||||||||||| ||||| ||||||||||| ||||| || ||||| || 
Sbjct: 41513 tcaaatatctctggatcagtcattcttgtatttgtcatgtggcactgtaccccactagtt 41572

                                                                         
Query: 505   ccattccaggtcggcccggcgccacagccacctccgatggtctcatagtaaccgaaagtg 564
             || | ||| || || || || ||||  |||||||| ||||| |||||||| || ||||| 
Sbjct: 41573 ccttcccatgtaggaccagccccacttccacctccaatggtttcatagtacccaaaagta 41632

                                       
Query: 565   tcctctccaaaggtcagattgttcat 590
             || |||||||| || ||||| |||||
Sbjct: 41633 tcatctccaaatgtaagattattcat 41658



to top

>ref|XM_390379.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein
            (FG10203.1) partial mRNA
          Length = 4083

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 475  tttgtcatgtgacactgaacaccacttgtacc 506
            ||||||||||| || |||||||||||||||||
Sbjct: 3572 tttgtcatgtggcagtgaacaccacttgtacc 3541



to top

>emb|Z68166.1|SPAC11D3 S.pombe chromosome I cosmid c11D3
          Length = 39292

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 661   acattaccaccaaccactgcagc 683
             |||||||||||||||||||||||
Sbjct: 24732 acattaccaccaaccactgcagc 24754



to top

>ref|NM_001018209.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC11D3.14c),
            partial mRNA
          Length = 3783

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 661  acattaccaccaaccactgcagc 683
            |||||||||||||||||||||||
Sbjct: 3215 acattaccaccaaccactgcagc 3193



to top

>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE, complete
             sequence
          Length = 42001

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 517   ggcccggcgccacagccacctc 538
             ||||||||||||||||||||||
Sbjct: 40489 ggcccggcgccacagccacctc 40510



to top

>gb|AC154848.2| Mus musculus BAC clone RP23-38J19 from 13, complete sequence
          Length = 140465

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 90    tgtgtaaatagaaaacaaggcagatgatta 119
             ||||||||||||||||||| ||||| ||||
Sbjct: 21547 tgtgtaaatagaaaacaagacagattatta 21576



to top

>gb|AC133159.3| Mus musculus BAC clone RP24-503F11 from 13, complete sequence
          Length = 156151

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 90     tgtgtaaatagaaaacaaggcagatgatta 119
              ||||||||||||||||||| ||||| ||||
Sbjct: 140183 tgtgtaaatagaaaacaagacagattatta 140212



to top

>gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, complete sequence
          Length = 168053

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 80    agctttattctgtgtaaatagaaaa 104
             |||||||||||||| ||||||||||
Sbjct: 70512 agctttattctgtggaaatagaaaa 70536



to top

>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence
          Length = 184795

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 576    ggtcagattgttcatgcagccctga 600
              ||||| |||||||||||||||||||
Sbjct: 150722 ggtcacattgttcatgcagccctga 150698



to top

>emb|AL356915.19| Human DNA sequence from clone RP11-179F17 on chromosome 13 Contains the
              5' end of the FLT3 gene for fms-related tyrosine kinase 3,
              a novel gene, a eukaryotic translation elongation factor 1
              alpha 1 pseudogene, a novel pseudogene and two CpG islands,
              complete sequence
          Length = 194520

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     ttattctgtgtaaatagaaaa 104
              |||||||||||||||||||||
Sbjct: 188031 ttattctgtgtaaatagaaaa 188051



to top

>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7
          Length = 349323

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 433  ggatatcgctgctcaaagatctctggatc 461
            ||||| |||||||||| ||||||||||||
Sbjct: 3171 ggataacgctgctcaaggatctctggatc 3199



to top

>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 208028

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 490    tgaacaccacttgtaccattc 510
              |||||||||||||||||||||
Sbjct: 194781 tgaacaccacttgtaccattc 194801



to top

>gb|AC016394.13| Homo sapiens chromosome 10 clone RP11-152N13, complete sequence
          Length = 149726

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   tccattttcccctcccttcag 284
             |||||||||||||||||||||
Sbjct: 10223 tccattttcccctcccttcag 10243



to top

>ref|XM_682310.1| PREDICTED: Danio rerio similar to calcium channel,
           voltage-dependent, beta 4 subunit (LOC559015), mRNA
          Length = 852

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 559 aaagtgtcctctccaaaggtc 579
           |||||||||||||||||||||
Sbjct: 538 aaagtgtcctctccaaaggtc 558



to top

>gb|BC085330.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysing), mRNA (cDNA clone
            MGC:105359 IMAGE:7096390), complete cds
          Length = 4095

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3494 ggtcacattgttcatgcagccctg 3471



to top

>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    cgagctccattttcccctcc 278
              ||||||||||||||||||||
Sbjct: 709584 cgagctccattttcccctcc 709565



to top

>ref|NM_153122.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing) (Oplah), mRNA
          Length = 3984

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3395 ggtcacattgttcatgcagccctg 3372



to top

>gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, complete sequence
          Length = 207359

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 466    atccttgtgtttgtcatgtgacactgaa 493
              |||||||||||||| ||||| |||||||
Sbjct: 160123 atccttgtgtttgttatgtggcactgaa 160150



to top

>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence
          Length = 206729

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ctccattttcccctcccttc 282
              ||||||||||||||||||||
Sbjct: 198107 ctccattttcccctcccttc 198126



to top

>gb|BC079754.1| Xenopus laevis MGC84754 protein, mRNA (cDNA clone MGC:84754
            IMAGE:6950186), complete cds
          Length = 3305

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  ggtaaactctgcgaccatct 234
            ||||||||||||||||||||
Sbjct: 1228 ggtaaactctgcgaccatct 1247



to top

>gb|BC034522.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing), mRNA (cDNA clone
            MGC:28663 IMAGE:4236444), complete cds
          Length = 3984

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3395 ggtcacattgttcatgcagccctg 3372



to top

>gb|BC072530.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysing), mRNA (cDNA clone
            IMAGE:7097016), partial cds
          Length = 4120

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3523 ggtcacattgttcatgcagccctg 3500



to top

>gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493n6 map 11a2, complete
             sequence
          Length = 199326

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 636   gtctgtcaccctctgagagg 655
             ||||||||||||||||||||
Sbjct: 62525 gtctgtcaccctctgagagg 62506



to top

>ref|XM_539206.2| PREDICTED: Canis familiaris similar to 5-oxoprolinase
            (ATP-hydrolysing) (LOC482085), mRNA
          Length = 4184

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3633 ggtcacattgttcatgcagccctg 3610



to top

>ref|XM_572999.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNI02650) partial mRNA
          Length = 1733

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  cgagctccattttcccctcc 278
            ||||||||||||||||||||
Sbjct: 1186 cgagctccattttcccctcc 1167



to top

>ref|XM_804477.1| Trypanosoma cruzi strain CL Brener 5-oxoprolinase
            (Tc00.1047053509803.40) partial mRNA
          Length = 3996

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 451  atctctggatcagtcatccttgtgtttgtcat 482
            |||||||| |||||||| | ||||||||||||
Sbjct: 3515 atctctgggtcagtcattcgtgtgtttgtcat 3484



to top

>ref|XM_800645.1| Trypanosoma cruzi strain CL Brener 5-oxoprolinase
            (Tc00.1047053511273.59) partial mRNA
          Length = 2250

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 451  atctctggatcagtcatccttgtgtttgtcat 482
            |||||||| |||||||| | ||||||||||||
Sbjct: 1778 atctctgggtcagtcattcgtgtgtttgtcat 1747



to top

>gb|BC025120.1| Mus musculus 5-oxoprolinase (ATP-hydrolysing), mRNA (cDNA clone
            MGC:36824 IMAGE:4020691), complete cds
          Length = 2084

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 1493 ggtcacattgttcatgcagccctg 1470



to top

>emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in linkage group 23,
             complete sequence
          Length = 246041

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 559   aaagtgtcctctccaaaggt 578
             ||||||||||||||||||||
Sbjct: 83798 aaagtgtcctctccaaaggt 83817



to top

>ref|XM_500125.1| Yarrowia lipolytica CLIB122, YALI0A16291g predicted mRNA
          Length = 2436

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  ccgaaaccgccgccaccggg 158
            ||||||||||||||||||||
Sbjct: 1211 ccgaaaccgccgccaccggg 1230



to top

>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 513    ggtcggcccggcgccacagccacc 536
              ||||||||||||||| ||||||||
Sbjct: 115749 ggtcggcccggcgccccagccacc 115726



to top

>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    ggtcggcccggcgccacagccacc 536
              ||||||||||||||| ||||||||
Sbjct: 164436 ggtcggcccggcgccccagccacc 164459



to top

>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    ggtcggcccggcgccacagccacc 536
              ||||||||||||||| ||||||||
Sbjct: 333247 ggtcggcccggcgccccagccacc 333270



to top

>emb|AL645845.14| Mouse DNA sequence from clone RP23-338J18 on chromosome 11 Contains the
             Ewsh gene for Ewing sarcoma homolog, a novel gene, gene
             Emu1 and two CpG islands, complete sequence
          Length = 109446

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   gtctgtcaccctctgagagg 655
             ||||||||||||||||||||
Sbjct: 62436 gtctgtcaccctctgagagg 62455



to top

>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1,
              complete sequence
          Length = 199490

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    cttgtgtttgtcatgtgaca 488
              ||||||||||||||||||||
Sbjct: 114903 cttgtgtttgtcatgtgaca 114884



to top

>emb|BX088708.14| Zebrafish DNA sequence from clone CH211-196B14 in linkage group 3,
             complete sequence
          Length = 193659

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ctgtgtaaatagaaaacaag 108
             ||||||||||||||||||||
Sbjct: 63625 ctgtgtaaatagaaaacaag 63644



to top

>ref|NM_053904.1| Rattus norvegicus 5-oxoprolinase (ATP-hydrolysing) (Oplah), mRNA
          Length = 4003

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3429 ggtcacattgttcatgcagccctg 3406



to top

>gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106673

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ttattctgtgtaaatagaaa 103
             ||||||||||||||||||||
Sbjct: 51469 ttattctgtgtaaatagaaa 51450



to top

>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 193035

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ctccattttcccctcccttc 282
             ||||||||||||||||||||
Sbjct: 20595 ctccattttcccctcccttc 20576



to top

>gb|AC105107.5| Homo sapiens chromosome 8, clone CTD-3103L12, complete sequence
          Length = 135376

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 671    caaccactgcagccttgtcacttg 694
              |||||||||||||||| |||||||
Sbjct: 110616 caaccactgcagccttttcacttg 110639



to top

>gb|DQ302024.1| Uncultured archaeon clone 4H3_ar23 16S ribosomal RNA gene, partial
           sequence
          Length = 867

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  gcatcgataacagctgggac 56
           ||||||||||||||||||||
Sbjct: 770 gcatcgataacagctgggac 751



to top

>dbj|AK164524.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330022L02 product:5-oxoprolinase
            (ATP-hydrolysing), full insert sequence
          Length = 1593

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 1019 ggtcacattgttcatgcagccctg 996



to top

>gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, complete sequence
          Length = 162245

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 671   caaccactgcagccttgtcacttg 694
             |||||||||||||||| |||||||
Sbjct: 13820 caaccactgcagccttttcacttg 13843



to top

>emb|BX294104.7| Zebrafish DNA sequence from clone CH211-245I22 in linkage group 1,
             complete sequence
          Length = 161644

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   cttgtgtttgtcatgtgaca 488
             ||||||||||||||||||||
Sbjct: 40314 cttgtgtttgtcatgtgaca 40295



to top

>dbj|AK130924.1| Homo sapiens cDNA FLJ27414 fis, clone WMC05333
          Length = 1163

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 265  ccattttcccctcccttcagtccc 288
            ||||||||||||||||||| ||||
Sbjct: 1005 ccattttcccctcccttcaatccc 982



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ggccatcaccgcctcggtgg 381
               ||||||||||||||||||||
Sbjct: 2671907 ggccatcaccgcctcggtgg 2671926



to top

>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence
          Length = 231792

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ctccattttcccctcccttc 282
              ||||||||||||||||||||
Sbjct: 142165 ctccattttcccctcccttc 142146



to top

>gb|U70825.1|RRU70825 Rattus norvegicus 5-oxo-L-prolinase mRNA, complete cds
          Length = 4003

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 576  ggtcagattgttcatgcagccctg 599
            ||||| ||||||||||||||||||
Sbjct: 3429 ggtcacattgttcatgcagccctg 3406



to top

>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     ccgaaaccgccgccaccggg 158
               ||||||||||||||||||||
Sbjct: 1666443 ccgaaaccgccgccaccggg 1666424



to top

>emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chromosome 2, complete
             sequence
          Length = 142296

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   ctgctcaaagatctctggat 460
             ||||||||||||||||||||
Sbjct: 64902 ctgctcaaagatctctggat 64921



to top

>emb|AL358332.3|CNS05TE3 Human chromosome 14 DNA sequence BAC R-255G12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 161261

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   ccattttcccctcccttcagtccc 288
             ||||||||||||||||||| ||||
Sbjct: 69020 ccattttcccctcccttcaatccc 69043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,891,641
Number of Sequences: 3902068
Number of extensions: 5891641
Number of successful extensions: 112452
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112219
Number of HSP's gapped (non-prelim): 224
length of query: 703
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 680
effective length of database: 17,143,297,704
effective search space: 11657442438720
effective search space used: 11657442438720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top