>LEU3_PSEHT (Q3IJS3) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 358

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -1

Query: 494 QQGFDPLCVCSI*GG*YFSAKPASGE 417
           +QGFD LCV  + GG YF  K  SGE
Sbjct: 130 EQGFDILCVRELTGGIYFGEKGRSGE 155

>RPOC1_EMIHU (Q4G3A6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 609

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 19/80 (23%)
 Frame = +1

Query: 85  PATDIAYSTPSINKI*DIVY-------------HYFSDLKRLIFVYRGNIIQQHAF---- 213
           PAT  A  TPS + +    Y             HYFSD +  I  Y+ + I  H F    
Sbjct: 493 PATGDAILTPSQDMVLGCFYLTANNPSQQLNKNHYFSDFEDAILAYQNSQIHLHTFIWVR 552

Query: 214 --NLKRKQDKYCICTYRSNM 267
             N+   +D+ C  T   N+
Sbjct: 553 CNNVDLTEDETCSQTQSGNL 572

>REL_MOUSE (P15307) C-Rel proto-oncogene protein (C-Rel protein)|
          Length = 587

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +3

Query: 354 HYPSSWPPLGSAAHPXTK*SIFSTGRFSTEVSASSNGTNTKGVKPLL 494
           H P+SWPP+    HP +     ST   ST  SA +  +N++G+ P L
Sbjct: 380 HQPTSWPPV---THPTS--HPVSTNTLST-FSAGTLSSNSQGILPFL 420

>YFZB_SCHPO (Q9URX4) Putative family 31 glucosidase C1039.11c precursor (EC|
           3.2.1.-)
          Length = 995

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
 Frame = +1

Query: 76  HFIPATDIA-YSTPSINKI*DIVYHYFSDLKRLIF-------VYRGNI 195
           H++P  D A Y+   IN+  D+ Y Y+  ++R IF       +Y GN+
Sbjct: 406 HYVPIIDAAIYAANPINRSDDVYYPYYEGVRRDIFLRNPDRSLYVGNV 453

>CAC1S_MOUSE (Q02789) Voltage-dependent L-type calcium channel alpha-1S subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.1)
           (Calcium channel, L type, alpha-1 polypeptide, isoform
           3, skeletal muscle)
          Length = 1880

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 472 VFVPFEEADTSVLNLPVEKMDYF 404
           V++P  E D + LNL +EK++YF
Sbjct: 70  VYLPMPEDDNNTLNLGLEKLEYF 92

>TEE6_STRP6 (P18481) Trypsin-resistant surface T6 protein precursor (T6|
           antigen)
          Length = 537

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 411 SIFSTGRFSTEVSASSNGTNTKGVKPLLWETAXTSGSCVSFS 536
           S+  TG  S E++  +NG NT  +KP   E    S    +++
Sbjct: 67  SLTETGPTSQEITTIANGINTGKIKPFSTENVSISNGTATYN 108

>VA35_VACCV (Q01232) Protein A35 precursor|
          Length = 176

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 151 FSDLKRLIFVYRGNIIQQHAFNLKRKQDKYCICTYRSNMNTV 276
           +SD+++  F Y+G I+ Q + +L R  + Y IC    + NT+
Sbjct: 51  YSDMQKCYFSYKGKIVPQDSNDLAR-FNIYSICAAYRSKNTI 91

>VA35_VACCC (P21058) Protein A35 precursor|
          Length = 176

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 151 FSDLKRLIFVYRGNIIQQHAFNLKRKQDKYCICTYRSNMNTV 276
           +SD+++  F Y+G I+ Q + +L R  + Y IC    + NT+
Sbjct: 51  YSDMQKCYFSYKGKIVPQDSNDLAR-FNIYSICAAYRSKNTI 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,050,634
Number of Sequences: 219361
Number of extensions: 1687625
Number of successful extensions: 3475
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)