ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464420.1| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
3dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4dbj|AK063218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
6dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
7dbj|AK107791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
8gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 0.13
9ref|NM_211943.1| Eremothecium gossypii AGR215Cp (AGR215C), mRNA 46 0.13
10gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full... 44 0.50
11dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
12gb|U26948.1|GMU26948 Glycine max ribosomal protein S16 (rps16) g... 44 0.50
13gb|AC150858.4| Bos taurus BAC CH240-431L22 (Children's Hospital... 42 2.0
14emb|CR734957.2|CNS0GTVG Tetraodon nigroviridis full-length cDNA 42 2.0
15emb|CR727091.2|CNS0GNYX Tetraodon nigroviridis full-length cDNA 42 2.0
16emb|CR726668.2|CNS0GNN6 Tetraodon nigroviridis full-length cDNA 42 2.0
17emb|CR725013.1|CNS0GMD7 Tetraodon nigroviridis full-length cDNA 42 2.0
18emb|CR685436.2|CNS0FRU0 Tetraodon nigroviridis full-length cDNA 42 2.0
19emb|CR356246.5| Zebrafish DNA sequence from clone CH211-107O10 i... 42 2.0
20emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on ch... 42 2.0
21gb|AF170710.1|AF170710 Lycodichthys dearborni lactate dehydrogen... 42 2.0
22gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl... 42 2.0
23ref|XM_483584.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
24ref|XM_480482.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
25ref|XM_507155.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 7.9
26ref|XM_474403.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
27ref|XM_478786.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
28gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 7.9
29gb|AY278219.1| Pseudomonas stutzeri 1317 type II PHA synthase op... 40 7.9
30gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.9
31gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.9
32gb|DQ067180.1| Leiopodus singularis voucher Lpsn651 conserved AT... 40 7.9
33ref|XM_883455.1| Leishmania major strain Friedlin hypothetical p... 40 7.9
34emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 40 7.9
35gb|AC091173.10| Homo sapiens chromosome 8, clone RP11-280G9, com... 40 7.9
36ref|XM_847950.1| PREDICTED: Canis familiaris similar to H6 homeo... 40 7.9
37ref|XM_849706.1| PREDICTED: Canis familiaris similar to F31D4.2 ... 40 7.9
38gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, comp... 40 7.9
39gb|AC149808.12| Medicago truncatula clone mth2-154g23, complete ... 40 7.9
40gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete s... 40 7.9
41gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete se... 40 7.9
42gb|BC024266.1| Mus musculus cDNA clone IMAGE:5137538, **** WARNI... 40 7.9
43gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.9
44emb|AL133351.34| Human DNA sequence from clone RP1-90J20 on chro... 40 7.9
45emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.9
46emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.9
47emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 40 7.9
48emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 7.9
49emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.9
50emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 7.9
51emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.9
52emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
53emb|AJ277923.1|SCA277923 Serinus canaria partial mRNA for SW-sen... 40 7.9
54gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Ca... 40 7.9
55emb|AL832738.1|HSM804049 Homo sapiens mRNA; cDNA DKFZp686I2113 (... 40 7.9
56gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 40 7.9
57gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 40 7.9
58gb|AC067881.5| Homo sapiens chromosome 8, clone RP11-687K23, com... 40 7.9
59gb|AC012619.6| Homo sapiens chromosome 5 clone CTD-2022K1, compl... 40 7.9
60gb|AF028687.1|AF028687 Laudakia caucasia CAS182808 NADH dehydrog... 40 7.9
61gb|AF028686.2|AF028686 Laudakia caucasia CAS194304 NADH dehydrog... 40 7.9
62gb|AF028680.1|AF028680 Laudakia erythrogastra CAS184400 NADH deh... 40 7.9
63gb|AF028679.1|AF028679 Laudakia erythrogastra CAS182954 NADH deh... 40 7.9
64gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.9
65dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
66dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
67dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
68gb|AC084595.1|CBRG42E22 Caenorhabditis briggsae cosmid G42E22, c... 40 7.9
69gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.9
70dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
71dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 7.9
72dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 7.9
73gb|AF172705.1|AF172705 Laudakia caucasia MVZ218720 NADH dehydrog... 40 7.9
74dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
75gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the... 40 7.9
76dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
77dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
78dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
79dbj|AK099016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
80gb|AF149241.1|CLSWS2OP4 Columba livia SWS2 opsin (sws2) gene, ex... 40 7.9
81dbj|AK067587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
82dbj|AK067317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
83emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in... 40 7.9
84emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.9
85gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, co... 40 7.9
86gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp... 40 7.9
87gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 7.9
88dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 7.9
89dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.9 
>ref|XM_464420.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 636

 Score =  141 bits (71), Expect = 3e-30
 Identities = 118/133 (88%), Gaps = 3/133 (2%)
 Strand = Plus / Minus

                                                                       
Query: 300 cggcgaagtcgagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatca 359
           |||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||||||||
Sbjct: 466 cggcgaaggcgagcggggtggcgctggcgaggaacgacggcgagtcgtcgccggccatca 407

                                                                       
Query: 360 ccaccaccaccttg---ggcacctccctgtccagcggcgtcagcacgcgcacagacatca 416
           | ||||||||| ||   ||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 406 cgaccaccaccctgggcggcgcctccctgtccagcggcgccagcacgcgcaccgacatca 347

                        
Query: 417 tcccggccgggac 429
           |||| | ||||||
Sbjct: 346 tccccggcgggac 334



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                       
Query: 476 agcacggccagagccaccgcgatgaggctcatcaccacggcgaagccgatgaacaggtac 535
           |||||||| || ||||||||||||||   |||||||||  |||| |||||||||||||||
Sbjct: 269 agcacggcgagcgccaccgcgatgagcgccatcaccaccccgaacccgatgaacaggtac 210

                                        
Query: 536 ggcgtcggcgtcgaccagaacggcggcgg 564
           |||||||||||||||||||||||||||||
Sbjct: 209 ggcgtcggcgtcgaccagaacggcggcgg 181
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 3e-30
 Identities = 118/133 (88%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                           
Query: 300     cggcgaagtcgagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatca 359
               |||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||||||||
Sbjct: 5079244 cggcgaaggcgagcggggtggcgctggcgaggaacgacggcgagtcgtcgccggccatca 5079303

                                                                           
Query: 360     ccaccaccaccttg---ggcacctccctgtccagcggcgtcagcacgcgcacagacatca 416
               | ||||||||| ||   ||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 5079304 cgaccaccaccctgggcggcgcctccctgtccagcggcgccagcacgcgcaccgacatca 5079363

                            
Query: 417     tcccggccgggac 429
               |||| | ||||||
Sbjct: 5079364 tccccggcgggac 5079376



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                           
Query: 476     agcacggccagagccaccgcgatgaggctcatcaccacggcgaagccgatgaacaggtac 535
               |||||||| || ||||||||||||||   |||||||||  |||| |||||||||||||||
Sbjct: 5079441 agcacggcgagcgccaccgcgatgagcgccatcaccaccccgaacccgatgaacaggtac 5079500

                                            
Query: 536     ggcgtcggcgtcgaccagaacggcggcgg 564
               |||||||||||||||||||||||||||||
Sbjct: 5079501 ggcgtcggcgtcgaccagaacggcggcgg 5079529
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>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score =  141 bits (71), Expect = 3e-30
 Identities = 118/133 (88%), Gaps = 3/133 (2%)
 Strand = Plus / Plus

                                                                         
Query: 300   cggcgaagtcgagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatca 359
             |||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||||||||
Sbjct: 39742 cggcgaaggcgagcggggtggcgctggcgaggaacgacggcgagtcgtcgccggccatca 39801

                                                                         
Query: 360   ccaccaccaccttg---ggcacctccctgtccagcggcgtcagcacgcgcacagacatca 416
             | ||||||||| ||   ||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 39802 cgaccaccaccctgggcggcgcctccctgtccagcggcgccagcacgcgcaccgacatca 39861

                          
Query: 417   tcccggccgggac 429
             |||| | ||||||
Sbjct: 39862 tccccggcgggac 39874



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 476   agcacggccagagccaccgcgatgaggctcatcaccacggcgaagccgatgaacaggtac 535
             |||||||| || ||||||||||||||   |||||||||  |||| |||||||||||||||
Sbjct: 39939 agcacggcgagcgccaccgcgatgagcgccatcaccaccccgaacccgatgaacaggtac 39998

                                          
Query: 536   ggcgtcggcgtcgaccagaacggcggcgg 564
             |||||||||||||||||||||||||||||
Sbjct: 39999 ggcgtcggcgtcgaccagaacggcggcgg 40027
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>dbj|AK063218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-E02, full
           insert sequence
          Length = 636

 Score =  141 bits (71), Expect = 3e-30
 Identities = 118/133 (88%), Gaps = 3/133 (2%)
 Strand = Plus / Minus

                                                                       
Query: 300 cggcgaagtcgagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatca 359
           |||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||||||||
Sbjct: 466 cggcgaaggcgagcggggtggcgctggcgaggaacgacggcgagtcgtcgccggccatca 407

                                                                       
Query: 360 ccaccaccaccttg---ggcacctccctgtccagcggcgtcagcacgcgcacagacatca 416
           | ||||||||| ||   ||| |||||||||||||||||| |||||||||||| |||||||
Sbjct: 406 cgaccaccaccctgggcggcgcctccctgtccagcggcgccagcacgcgcaccgacatca 347

                        
Query: 417 tcccggccgggac 429
           |||| | ||||||
Sbjct: 346 tccccggcgggac 334



 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                       
Query: 476 agcacggccagagccaccgcgatgaggctcatcaccacggcgaagccgatgaacaggtac 535
           |||||||| || ||||||||||||||   |||||||||  |||| |||||||||||||||
Sbjct: 269 agcacggcgagcgccaccgcgatgagcgccatcaccaccccgaacccgatgaacaggtac 210

                                        
Query: 536 ggcgtcggcgtcgaccagaacggcggcgg 564
           |||||||||||||||||||||||||||||
Sbjct: 209 ggcgtcggcgtcgaccagaacggcggcgg 181
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                            
Query: 459      tgcggcgggagcagaggagcacggccagagccaccgcgatgaggctcatcaccacggcga 518
                ||||||| | |||||  ||||||  ||| |||||||||||||||| ||||| ||| ||||
Sbjct: 25272116 tgcggcgcgtgcagaccagcacgagcagcgccaccgcgatgaggcccatcatcaccgcga 25272057

                                             
Query: 519      agccgatgaacaggtacggcgtcggcgtc 547
                | || | ||| ||||||||||||||||||
Sbjct: 25272056 accccaggaaaaggtacggcgtcggcgtc 25272028



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                            
Query: 310      gagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatcaccaccaccac 369
                ||||||| |||||||||||||||||||||||  |  |||||||||||| |  || |||||
Sbjct: 25272256 gagcggcttggcgctggcgaggaaggacggcgcggtgtcgccggccatgatgacgaccac 25272197

                       
Query: 370      cttgggc 376
                |||||||
Sbjct: 25272196 cttgggc 25272190



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 387     ccagcggcgtcagcacgcgcac 408
               ||||||||||||||||||||||
Sbjct: 4713441 ccagcggcgtcagcacgcgcac 4713462
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>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0505A04
          Length = 159241

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 459   tgcggcgggagcagaggagcacggccagagccaccgcgatgaggctcatcaccacggcga 518
             ||||||| | |||||  ||||||  ||| |||||||||||||||| ||||| ||| ||||
Sbjct: 90724 tgcggcgcgtgcagaccagcacgagcagcgccaccgcgatgaggcccatcatcaccgcga 90665

                                          
Query: 519   agccgatgaacaggtacggcgtcggcgtc 547
             | || | ||| ||||||||||||||||||
Sbjct: 90664 accccaggaaaaggtacggcgtcggcgtc 90636



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 310   gagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatcaccaccaccac 369
             ||||||| |||||||||||||||||||||||  |  |||||||||||| |  || |||||
Sbjct: 90864 gagcggcttggcgctggcgaggaaggacggcgcggtgtcgccggccatgatgacgaccac 90805

                    
Query: 370   cttgggc 376
             |||||||
Sbjct: 90804 cttgggc 90798
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>dbj|AK107791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D05, full
           insert sequence
          Length = 701

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 tgcggcgggagcagaggagcacggccagagccaccgcgatgaggctcatcaccacggcga 518
           ||||||| | |||||  ||||||  ||| |||||||||||||||| ||||| ||| ||||
Sbjct: 245 tgcggcgcgtgcagaccagcacgagcagcgccaccgcgatgaggcccatcatcaccgcga 186

                                        
Query: 519 agccgatgaacaggtacggcgtcggcgtc 547
           | || | ||| ||||||||||||||||||
Sbjct: 185 accccaggaaaaggtacggcgtcggcgtc 157



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 gagcggcgtggcgctggcgaggaaggacggcatgtcgtcgccggccatcaccaccaccac 369
           ||||||| |||||||||||||||||||||||  |  |||||||||||| |  || |||||
Sbjct: 385 gagcggcttggcgctggcgaggaaggacggcgcggtgtcgccggccatgatgacgaccac 326

                  
Query: 370 cttgggc 376
           |||||||
Sbjct: 325 cttgggc 319
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 386     tccagcggcgtcagcacgcgcac 408
               |||||||||||||||||||||||
Sbjct: 1159959 tccagcggcgtcagcacgcgcac 1159981
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>ref|NM_211943.1| Eremothecium gossypii AGR215Cp (AGR215C), mRNA
          Length = 1149

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 386 tccagcggcgtcagcacgcgcac 408
           |||||||||||||||||||||||
Sbjct: 533 tccagcggcgtcagcacgcgcac 511
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>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA
           sequence
          Length = 954

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 465 gggagcagaggagcacggccag 486
           ||||||||||||||||||||||
Sbjct: 92  gggagcagaggagcacggccag 71
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 387   ccagcggcgtcagcacgcgcac 408
             ||||||||||||||||||||||
Sbjct: 76040 ccagcggcgtcagcacgcgcac 76061
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>gb|U26948.1|GMU26948 Glycine max ribosomal protein S16 (rps16) gene, partial cds,
            beta-carboxyltransferase (accD), photosystem I component
            (psaI), ORF 202 protein (ORF 203), ORF 151 protein (ORF
            151), ORF 103 protein (ORF 103), ORF 229 precursor
            protein (ORF 229), and cytochrome f precursor (petA)
            genes, chloroplast genes encoding chloroplast proteins,
            complete cds
          Length = 5693

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 127  aataattctagtactagtataa 148
            ||||||||||||||||||||||
Sbjct: 1221 aataattctagtactagtataa 1242
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>gb|AC150858.4| Bos taurus  BAC CH240-431L22 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 166138

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    ctagtataaaagaaacaaaat 160
              |||||||||||||||||||||
Sbjct: 139477 ctagtataaaagaaacaaaat 139497
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>emb|CR734957.2|CNS0GTVG Tetraodon nigroviridis full-length cDNA
          Length = 1844

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 128 ccggccgtcaccaccaccaccttgg 104
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>emb|CR727091.2|CNS0GNYX Tetraodon nigroviridis full-length cDNA
          Length = 1253

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 290 ccggccgtcaccaccaccaccttgg 266
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>emb|CR726668.2|CNS0GNN6 Tetraodon nigroviridis full-length cDNA
          Length = 1263

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 291 ccggccgtcaccaccaccaccttgg 267
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>emb|CR725013.1|CNS0GMD7 Tetraodon nigroviridis full-length cDNA
          Length = 1227

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 287 ccggccgtcaccaccaccaccttgg 263
to top
>emb|CR685436.2|CNS0FRU0 Tetraodon nigroviridis full-length cDNA
          Length = 1947

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 253 ccggccgtcaccaccaccaccttgg 229
to top
>emb|CR356246.5| Zebrafish DNA sequence from clone CH211-107O10 in linkage group 7,
             complete sequence
          Length = 101758

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   atctaataattctagtactagtata 147
             |||||||||| ||||||||||||||
Sbjct: 85167 atctaataatactagtactagtata 85143
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>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains
             part of a novel gene (KIAA0916), complete sequence
          Length = 124964

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   aaagaaacaaaatttaactcc 168
             |||||||||||||||||||||
Sbjct: 57336 aaagaaacaaaatttaactcc 57356
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>gb|AF170710.1|AF170710 Lycodichthys dearborni lactate dehydrogenase-A (ldh-a) mRNA,
           complete cds
          Length = 1025

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 350 ccggccatcaccaccaccaccttgg 374
           |||||| ||||||||||||||||||
Sbjct: 301 ccggccgtcaccaccaccaccttgg 277
to top
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   ataattctagtactagtataa 148
             |||||||||||||||||||||
Sbjct: 57287 ataattctagtactagtataa 57307
to top
>ref|XM_483584.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 345 cgtcgccggccatcaccaccacca 368
           |||||||||||| |||||||||||
Sbjct: 179 cgtcgccggccaccaccaccacca 202
to top
>ref|XM_480482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2017

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  aaagaaacaaaatttaactc 167
            ||||||||||||||||||||
Sbjct: 1880 aaagaaacaaaatttaactc 1861
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>ref|XM_507155.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.11
            mRNA
          Length = 2020

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  aaagaaacaaaatttaactc 167
            ||||||||||||||||||||
Sbjct: 1883 aaagaaacaaaatttaactc 1864
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>ref|XM_474403.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 cacggcggcggcgacgtcct 257
           ||||||||||||||||||||
Sbjct: 300 cacggcggcggcgacgtcct 281
to top
>ref|XM_478786.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 752

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 cggccatcaccaccaccacc 370
           ||||||||||||||||||||
Sbjct: 244 cggccatcaccaccaccacc 263
to top
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cggccatcaccaccaccacc 370
              ||||||||||||||||||||
Sbjct: 875399 cggccatcaccaccaccacc 875418
to top
>gb|AY278219.1| Pseudomonas stutzeri 1317 type II PHA synthase operon, complete
            sequence
          Length = 4746

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 343  gtcgtcgccggccatcacca 362
            ||||||||||||||||||||
Sbjct: 2500 gtcgtcgccggccatcacca 2481
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 538     cgtcggcgtcgaccagaacggcggcggg 565
               |||||||| ||||||||||||| |||||
Sbjct: 3171822 cgtcggcgccgaccagaacggctgcggg 3171795
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 513     cggcgaagccgatgaacagg 532
               ||||||||||||||||||||
Sbjct: 1108696 cggcgaagccgatgaacagg 1108677
to top
>gb|DQ067180.1| Leiopodus singularis voucher Lpsn651 conserved ATPase domain
           protein (CAD) gene, partial cds
          Length = 920

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 437 tcgtcctcgcggcctccctc 456
           ||||||||||||||||||||
Sbjct: 686 tcgtcctcgcggcctccctc 705
to top
>ref|XM_883455.1| Leishmania major strain Friedlin hypothetical protein (L3291.01)
           partial mRNA
          Length = 9192

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 388 cagcggcgtcagcacgcgca 407
           ||||||||||||||||||||
Sbjct: 876 cagcggcgtcagcacgcgca 895
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   cagcggcgtcagcacgcgca 407
             ||||||||||||||||||||
Sbjct: 26209 cagcggcgtcagcacgcgca 26190
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>gb|AC091173.10| Homo sapiens chromosome 8, clone RP11-280G9, complete sequence
          Length = 142265

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   aaaagaaacaaaatttaact 166
             ||||||||||||||||||||
Sbjct: 46147 aaaagaaacaaaatttaact 46166
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>ref|XM_847950.1| PREDICTED: Canis familiaris similar to H6 homeo box 1 (LOC610441),
           mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 432 cctcctcgtcctcgcggcctccct 455
           ||||||||||||||||||| ||||
Sbjct: 133 cctcctcgtcctcgcggccgccct 110
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>ref|XM_849706.1| PREDICTED: Canis familiaris similar to F31D4.2 (LOC611986), mRNA
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 gcctccctccctgcggcggg 467
           ||||||||||||||||||||
Sbjct: 33  gcctccctccctgcggcggg 52
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>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence
          Length = 237801

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    taaaagaaacaaaatttaac 165
              ||||||||||||||||||||
Sbjct: 164986 taaaagaaacaaaatttaac 165005
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>gb|AC149808.12| Medicago truncatula clone mth2-154g23, complete sequence
          Length = 64610

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   ataaaagaaacaaaatttaa 164
             ||||||||||||||||||||
Sbjct: 20586 ataaaagaaacaaaatttaa 20605
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>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence
          Length = 145073

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cggccatcaccaccaccacc 370
              ||||||||||||||||||||
Sbjct: 118641 cggccatcaccaccaccacc 118660
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>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence
          Length = 142205

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cggccatcaccaccaccacc 370
             ||||||||||||||||||||
Sbjct: 23569 cggccatcaccaccaccacc 23550
to top
>gb|BC024266.1| Mus musculus cDNA clone IMAGE:5137538, **** WARNING: chimeric clone
           ****
          Length = 4305

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 tcctcgtcctcgcggcctcc 453
           ||||||||||||||||||||
Sbjct: 506 tcctcgtcctcgcggcctcc 525
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     gcgaagtcgagcggcgtggc 321
               ||||||||||||||||||||
Sbjct: 1359627 gcgaagtcgagcggcgtggc 1359608
to top
>emb|AL133351.34| Human DNA sequence from clone RP1-90J20 on chromosome 6p24.1-25.3
             Contains the 5' end of a putative novel gene, the SERPINB9
             gene for serine (or cysteine) proteinase inhibitor clade B
             (ovalbumin) member 9, a novel gene, the SERPINB6 gene for
             serine (or cysteine) proteinase inhibitor clade B
             (ovalbumin) member 6, three putative novel genes, the gene
             for NAD(P)H dehydrogenase quinone 2 (NQO2) and eight
             predicted CpG islands, complete sequence
          Length = 173670

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   accaccaccaccttgggcac 378
             ||||||||||||||||||||
Sbjct: 77477 accaccaccaccttgggcac 77458
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 538   cgtcggcgtcgaccagaacggcggcggg 565
             |||||||| ||||||||||||| |||||
Sbjct: 58629 cgtcggcgccgaccagaacggctgcggg 58602
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   gcggcggcgacgtccttggcgccg 265
             |||||||||||| |||||||||||
Sbjct: 54799 gcggcggcgacgaccttggcgccg 54822
to top
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 242    gcggcggcgacgtccttggcgccg 265
              |||||||||||| |||||||||||
Sbjct: 327698 gcggcggcgacgaccttggcgccg 327721
to top
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    gcggcggcgacgtccttggcgccg 265
              |||||||||||| |||||||||||
Sbjct: 332833 gcggcggcgacgaccttggcgccg 332810
to top
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    agcggcgtggcgctggcgag 330
              ||||||||||||||||||||
Sbjct: 116447 agcggcgtggcgctggcgag 116428
to top
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 145     ataaaagaaacaaaatttaa 164
               ||||||||||||||||||||
Sbjct: 2055133 ataaaagaaacaaaatttaa 2055114
to top
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            11/14
          Length = 318050

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 538  cgtcggcgtcgaccagaacggcggcggg 565
            |||||||| ||||||||||||| |||||
Sbjct: 9182 cgtcggcgccgaccagaacggctgcggg 9155
to top
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cacggcggcggcgacgtcct 257
              ||||||||||||||||||||
Sbjct: 133146 cacggcggcggcgacgtcct 133165
to top
>emb|AJ277923.1|SCA277923 Serinus canaria partial mRNA for SW-sensitive opsin (ops2 gene)
          Length = 1002

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 354 ccatcaccaccaccaccttgggcacctc 381
           ||||||||||||||| ||||| ||||||
Sbjct: 739 ccatcaccaccaccatcttggtcacctc 712
to top
>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 212172

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    aaaagaaacaaaatttaact 166
              ||||||||||||||||||||
Sbjct: 159519 aaaagaaacaaaatttaact 159500
to top
>emb|AL832738.1|HSM804049 Homo sapiens mRNA; cDNA DKFZp686I2113 (from clone DKFZp686I2113)
          Length = 5325

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  accaccaccaccttgggcac 378
            ||||||||||||||||||||
Sbjct: 2806 accaccaccaccttgggcac 2787
to top
>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    cggccatcaccaccaccacc 370
              ||||||||||||||||||||
Sbjct: 118343 cggccatcaccaccaccacc 118324
to top
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ggcggcgacgtccttggcgc 263
             ||||||||||||||||||||
Sbjct: 97499 ggcggcgacgtccttggcgc 97518
to top
>gb|AC067881.5| Homo sapiens chromosome 8, clone RP11-687K23, complete sequence
          Length = 186676

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    aaaagaaacaaaatttaact 166
              ||||||||||||||||||||
Sbjct: 175752 aaaagaaacaaaatttaact 175733
to top
>gb|AC012619.6| Homo sapiens chromosome 5 clone CTD-2022K1, complete sequence
          Length = 89196

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cggccatcaccaccaccacc 370
             ||||||||||||||||||||
Sbjct: 74924 cggccatcaccaccaccacc 74905
to top
>gb|AF028687.1|AF028687 Laudakia caucasia CAS182808 NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ttgcaccaaaactactaatt 104
            ||||||||||||||||||||
Sbjct: 1076 ttgcaccaaaactactaatt 1095
to top
>gb|AF028686.2|AF028686 Laudakia caucasia CAS194304 NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ttgcaccaaaactactaatt 104
            ||||||||||||||||||||
Sbjct: 1076 ttgcaccaaaactactaatt 1095
to top
>gb|AF028680.1|AF028680 Laudakia erythrogastra CAS184400 NADH dehydrogenase subunit 1 (ND1)
            gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met
            genes, complete sequence; NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ttgcaccaaaactactaatt 104
            ||||||||||||||||||||
Sbjct: 1076 ttgcaccaaaactactaatt 1095
to top
>gb|AF028679.1|AF028679 Laudakia erythrogastra CAS182954 NADH dehydrogenase subunit 1 (ND1)
            gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met
            genes, complete sequence; NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ttgcaccaaaactactaatt 104
            ||||||||||||||||||||
Sbjct: 1076 ttgcaccaaaactactaatt 1095
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 504     tcatcaccacggcgaagccgatga 527
               |||||||| |||||||||||||||
Sbjct: 1656829 tcatcacctcggcgaagccgatga 1656852
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 238      cacggcggcggcgacgtcct 257
                ||||||||||||||||||||
Sbjct: 34927033 cacggcggcggcgacgtcct 34927052



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 238      cacggcggcggcgacgtcct 257
                ||||||||||||||||||||
Sbjct: 20147592 cacggcggcggcgacgtcct 20147573
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 345      cgtcgccggccatcaccaccacca 368
                |||||||||||| |||||||||||
Sbjct: 27107026 cgtcgccggccaccaccaccacca 27107049



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     aaagaaacaaaatttaactc 167
               ||||||||||||||||||||
Sbjct: 5382318 aaagaaacaaaatttaactc 5382299
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 351      cggccatcaccaccaccacc 370
                ||||||||||||||||||||
Sbjct: 23057167 cggccatcaccaccaccacc 23057186
to top
>gb|AC084595.1|CBRG42E22 Caenorhabditis briggsae cosmid G42E22, complete sequence
          Length = 44045

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cggccatcaccaccaccacc 370
             ||||||||||||||||||||
Sbjct: 35965 cggccatcaccaccaccacc 35946
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 513     cggcgaagccgatgaacagg 532
               ||||||||||||||||||||
Sbjct: 1560338 cggcgaagccgatgaacagg 1560357
to top
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   aaagaaacaaaatttaactc 167
             ||||||||||||||||||||
Sbjct: 52129 aaagaaacaaaatttaactc 52110
to top
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 145     ataaaagaaacaaaatttaa 164
               ||||||||||||||||||||
Sbjct: 2075887 ataaaagaaacaaaatttaa 2075868
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 145     ataaaagaaacaaaatttaa 164
               ||||||||||||||||||||
Sbjct: 2035819 ataaaagaaacaaaatttaa 2035800
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>gb|AF172705.1|AF172705 Laudakia caucasia MVZ218720 NADH dehydrogenase subunit 1 (ND1) gene,
            partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes,
            complete sequence; NADH dehydrogenase subunit 2 (ND2)
            gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome c oxidase subunit I (COI) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ttgcaccaaaactactaatt 104
            ||||||||||||||||||||
Sbjct: 1076 ttgcaccaaaactactaatt 1095
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cggccatcaccaccaccacc 370
              ||||||||||||||||||||
Sbjct: 132381 cggccatcaccaccaccacc 132400
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>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 541  cggcgtcgaccagaacggcg 560
            ||||||||||||||||||||
Sbjct: 7901 cggcgtcgaccagaacggcg 7920
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1521_G02
          Length = 117964

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  cgtcgccggccatcaccaccacca 368
            |||||||||||| |||||||||||
Sbjct: 8059 cgtcgccggccaccaccaccacca 8082
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   cgtcgccggccatcaccaccacca 368
             |||||||||||| |||||||||||
Sbjct: 78113 cgtcgccggccaccaccaccacca 78136
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1699_E05
          Length = 170666

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  cggccatcaccaccaccacc 370
            ||||||||||||||||||||
Sbjct: 1351 cggccatcaccaccaccacc 1370
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>dbj|AK099016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C12, full
            insert sequence
          Length = 2017

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  aaagaaacaaaatttaactc 167
            ||||||||||||||||||||
Sbjct: 1880 aaagaaacaaaatttaactc 1861
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>gb|AF149241.1|CLSWS2OP4 Columba livia SWS2 opsin (sws2) gene, exon 4
          Length = 557

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 354 ccatcaccaccaccaccttgggcacctc 381
           ||||||||||||||| ||||| ||||||
Sbjct: 246 ccatcaccaccaccatcttggtcacctc 219
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>dbj|AK067587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112C20, full
            insert sequence
          Length = 2020

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  aaagaaacaaaatttaactc 167
            ||||||||||||||||||||
Sbjct: 1883 aaagaaacaaaatttaactc 1864
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>dbj|AK067317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105D21, full
           insert sequence
          Length = 985

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 cggccatcaccaccaccacc 370
           ||||||||||||||||||||
Sbjct: 473 cggccatcaccaccaccacc 492
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>emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in linkage group 20,
             complete sequence
          Length = 59170

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   aaaagaaacaaaatttaact 166
             ||||||||||||||||||||
Sbjct: 30602 aaaagaaacaaaatttaact 30621
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   cacggcggcggcgacgtcct 257
             ||||||||||||||||||||
Sbjct: 30977 cacggcggcggcgacgtcct 30996
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>gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, complete sequence
          Length = 237187

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   taaaagaaacaaaatttaac 165
             ||||||||||||||||||||
Sbjct: 76500 taaaagaaacaaaatttaac 76519
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>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ccatcaccaccaccaccttg 373
             ||||||||||||||||||||
Sbjct: 29331 ccatcaccaccaccaccttg 29350
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 508     caccacggcgaagccgatga 527
               ||||||||||||||||||||
Sbjct: 6977879 caccacggcgaagccgatga 6977860
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 130     aattctagtactagtataaaagaa 153
               |||| |||||||||||||||||||
Sbjct: 3216801 aattatagtactagtataaaagaa 3216824
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 556     cggcggcgggatcatggtgg 575
               ||||||||||||||||||||
Sbjct: 2096093 cggcggcgggatcatggtgg 2096074


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,003,013
Number of Sequences: 3902068
Number of extensions: 6003013
Number of successful extensions: 162917
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160459
Number of HSP's gapped (non-prelim): 2454
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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