ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18c14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TLC1_SOLTU (O24381) Plastidic ATP/ADP-transporter 212 8e-55
2TLC1_ARATH (Q39002) Chloroplast ADP,ATP carrier protein 1, chlor... 205 1e-52
3TLC2_ARATH (P92935) Chloroplast ADP,ATP carrier protein 2, chlor... 196 5e-50
4TLC1_CHLPN (Q9Z8J2) ADP,ATP carrier protein 1 (ADP/ATP transloca... 131 2e-30
5TLC1_CHLTR (O84068) ADP,ATP carrier protein 1 (ADP/ATP transloca... 125 2e-28
6TLC1_CHLMU (Q9PKX5) ADP,ATP carrier protein 1 (ADP/ATP transloca... 122 2e-27
7TLCA_RICPR (P19568) ADP,ATP carrier protein 1 (ADP/ATP transloca... 109 8e-24
8TLC2_CHLPN (Q9Z7U0) ADP,ATP carrier protein 2 (ADP/ATP transloca... 98 2e-20
9TLC2_CHLTR (O84502) ADP,ATP carrier protein 2 (ADP/ATP transloca... 93 1e-18
10TLCD_RICPR (Q9ZD47) ADP,ATP carrier protein 4 (ADP/ATP transloca... 93 1e-18
11TLCB_RICPR (Q9ZDF2) ADP,ATP carrier protein 2 (ADP/ATP transloca... 91 3e-18
12TLC2_CHLMU (Q9PJP6) ADP,ATP carrier protein 2 (ADP/ATP transloca... 91 5e-18
13TLCE_RICPR (O05962) ADP,ATP carrier protein 5 (ADP/ATP transloca... 91 5e-18
14TLCC_RICPR (Q9ZD67) ADP,ATP carrier protein 3 (ADP/ATP transloca... 87 4e-17
15CT112_MOUSE (Q6DIB4) Protein C20orf112 homolog 37 0.064
16CT112_PONPY (Q5RFT9) Protein C20orf112 homolog 35 0.32
17CT112_HUMAN (Q96MY1) Protein C20orf112 35 0.32
18L_NDVB (P11205) Large structural protein (Protein L) (Transcript... 34 0.54
19DCR1A_HUMAN (Q6PJP8) DNA cross-link repair 1A protein (hSNM1) (h... 31 3.5
20LITD_LATMA (Q25338) Delta-latroinsectotoxin precursor (Delta-LIT) 31 4.6
21P54_ENTFC (P13692) Protein P54 precursor 31 4.6
22HPR1_YEAST (P17629) Protein HPR1 30 7.8
23BNC2_MOUSE (Q8BMQ3) Zinc finger protein basonuclin-2 30 7.8
24RP54_CAUCR (Q03408) RNA polymerase sigma-54 factor 30 7.8

>TLC1_SOLTU (O24381) Plastidic ATP/ADP-transporter|
          Length = 631

 Score =  212 bits (540), Expect = 8e-55
 Identities = 113/165 (68%), Positives = 130/165 (78%), Gaps = 1/165 (0%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A FGMTPLLAAV+VGA+QNIFSKSAKYSLFDPCKEMAYIPLDED KVKGKAAIDVVCNPL
Sbjct: 465 AKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPL 524

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPL-AKQDLERE 340
           GKSGGALIQQFMIL+FGSLA+STPYLGG+LLVIV+AWLGA +SLD QF+ L  ++DLE+E
Sbjct: 525 GKSGGALIQQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKE 584

Query: 339 QKLKAEAVETTAQVVGTGNGSLQENVASQSSTNGTVIKQSQEPES 205
            +  +  +   +Q    GNG L    +S +   G     S EP S
Sbjct: 585 MERASLKIPVVSQ-NENGNGPLSSE-SSLNPAGGDSTNASSEPSS 627



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>TLC1_ARATH (Q39002) Chloroplast ADP,ATP carrier protein 1, chloroplast|
           precursor (ADP/ATP translocase 1) (Adenine nucleotide
           translocase 1)
          Length = 624

 Score =  205 bits (522), Expect = 1e-52
 Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 1/148 (0%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A  GMTPLLAAV+VGALQNIFSKSAKYSLFDPCKEMAYIPLDED KVKGKAAIDVVCNPL
Sbjct: 467 AKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPL 526

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPL-AKQDLERE 340
           GKSGGALIQQFMILSFGSLANSTPYLG ILLVIV AWL A +SL+ QF+ L ++++LE+E
Sbjct: 527 GKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKE 586

Query: 339 QKLKAEAVETTAQVVGTGNGSLQENVAS 256
            +  +           +GNGSL E+ +S
Sbjct: 587 MERASSVKIPVVSQDESGNGSLGESPSS 614



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>TLC2_ARATH (P92935) Chloroplast ADP,ATP carrier protein 2, chloroplast|
           precursor (ADP/ATP translocase 2) (Adenine nucleotide
           translocase 2)
          Length = 618

 Score =  196 bits (499), Expect = 5e-50
 Identities = 103/154 (66%), Positives = 119/154 (77%), Gaps = 1/154 (0%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A  GMTPLLAAV+VGALQNIFSKSAKYSLFDPCKEMAYIPLDED KVKGKAAIDVVCNPL
Sbjct: 464 AKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPL 523

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPL-AKQDLERE 340
           GKSGGALIQQFMIL+FGSLANSTPYLG ILL IV AWL A +SL+ QF+ L ++++LERE
Sbjct: 524 GKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELERE 583

Query: 339 QKLKAEAVETTAQVVGTGNGSLQENVASQSSTNG 238
            +  +             +G     ++ +S+  G
Sbjct: 584 MERASSVKIPVVSQEDAPSGETTSQLSEKSTPTG 617



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>TLC1_CHLPN (Q9Z8J2) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 515

 Score =  131 bits (329), Expect = 2e-30
 Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A FG TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    
Sbjct: 387 AMFGTTPLMLAVVVGAIQNILSKSTKYALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARF 446

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQF---SPLAKQDLE 346
           GKSGGALIQQ +++  GS+   TPYL  ILL I+  WL +   L+  F   S L +Q++ 
Sbjct: 447 GKSGGALIQQGLLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLAQSALKEQEVA 506

Query: 345 REQKLKAEA 319
           +E    A +
Sbjct: 507 QEDSAPASS 515



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>TLC1_CHLTR (O84068) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 528

 Score =  125 bits (313), Expect = 2e-28
 Identities = 69/146 (47%), Positives = 90/146 (61%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A  G TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    
Sbjct: 385 AALGTTPLMLAVVVGAIQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARF 444

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLAKQDLEREQ 337
           GKSGG+LIQQ +++  GS+   TP+L   L  I++ WL +   L+  F  LA    + ++
Sbjct: 445 GKSGGSLIQQGLLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLF--LAASAAKEQE 502

Query: 336 KLKAEAVETTAQVVGTGNGSLQENVA 259
             +A A E  A      +    E V+
Sbjct: 503 LAEAAAAEKEASSAAKESAPAIEGVS 528



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>TLC1_CHLMU (Q9PKX5) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 529

 Score =  122 bits (305), Expect = 2e-27
 Identities = 65/126 (51%), Positives = 85/126 (67%)
 Frame = -3

Query: 696 ATFGMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPL 517
           A  G TPL+ AV VGA+QNI SKS KY+LFD  KEMAYIPLD++ KVKGKAAIDVV    
Sbjct: 385 AALGTTPLMLAVVVGAVQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARF 444

Query: 516 GKSGGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLAKQDLEREQ 337
           GKSGG+LIQQ +++  GS++  TP+L   L  I++ WL +   L+  F  LA    + ++
Sbjct: 445 GKSGGSLIQQGLLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLF--LAASAAKEQE 502

Query: 336 KLKAEA 319
             +A A
Sbjct: 503 LAEATA 508



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>TLCA_RICPR (P19568) ADP,ATP carrier protein 1 (ADP/ATP translocase 1)|
          Length = 498

 Score =  109 bits (273), Expect = 8e-24
 Identities = 52/112 (46%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
 Frame = -3

Query: 681 TPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKSGG 502
           +PL  AV +G +QN+ SK  KYSLFD  K MAYIPLD+D++VKG+AA++V+   LGKSGG
Sbjct: 385 SPLTLAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGG 444

Query: 501 ALIQQ--FMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLAKQD 352
           A+IQ   F++        +TPY   I  +IVI W+ AV+ L+ ++  L  ++
Sbjct: 445 AIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVLVNKN 496



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>TLC2_CHLPN (Q9Z7U0) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)|
          Length = 540

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
 Frame = -3

Query: 687 GMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKS 508
           GMTPL  A + G +QN+ S+  K++ FD  KEMA+IPL  + K  GKAAID V + +GKS
Sbjct: 399 GMTPLALAAWTGGMQNVLSRGTKFTFFDQTKEMAFIPLSPEDKNHGKAAIDGVVSRIGKS 458

Query: 507 GGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLA-------KQDL 349
           GG+LI Q +++ F S+A S   +  +LL+I++ W+  V  +  ++   A       KQ  
Sbjct: 459 GGSLIYQGLLVIFSSVAASLNVIALVLLIIMVVWIAVVAYIGKEYYSRAADAVATLKQPK 518

Query: 348 EREQKLKAEAVETTAQ 301
           E    +  EA E+  Q
Sbjct: 519 EPSSSIVREAQESVEQ 534



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>TLC2_CHLTR (O84502) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)|
          Length = 540

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 51/128 (39%), Positives = 82/128 (64%), Gaps = 6/128 (4%)
 Frame = -3

Query: 687 GMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKS 508
           G++PL+   ++G +QN+FS++ K++ FD  KEMA+IPL++D K  GKAAID V + +GKS
Sbjct: 396 GISPLVLTAWLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKNYGKAAIDGVISRVGKS 455

Query: 507 GGALIQQFMILSFGSLANSTPYLGGILL------VIVIAWLGAVRSLDSQFSPLAKQDLE 346
           GG+L+ Q +++ F S+A S   +  +LL      + VIAWLG  R   ++   L + ++ 
Sbjct: 456 GGSLVYQGLLIIFSSVAASLNAITIVLLLALGSWIFVIAWLG--REYTAKTEALFRVNVS 513

Query: 345 REQKLKAE 322
            E  L+ E
Sbjct: 514 EEDVLQEE 521



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>TLCD_RICPR (Q9ZD47) ADP,ATP carrier protein 4 (ADP/ATP translocase 4)|
          Length = 512

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 48/111 (43%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
 Frame = -3

Query: 696 ATFGMT-PLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNP 520
           A F +T P L A+ +GA+QN+ SKS+KY+LFD  KEMAY+PL+ ++K+ GKAA DV+   
Sbjct: 393 ANFILTDPALVAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLEPEIKISGKAAADVIGTK 452

Query: 519 LGKSGGALIQQ--FMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQF 373
           LGKSG A +Q   F+IL   S  + +  L  I ++  + W+ A + L+ ++
Sbjct: 453 LGKSGSAFLQSLIFIILPSASYQSISICLMIIFILTCVTWIWATKELNKEY 503



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>TLCB_RICPR (Q9ZDF2) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)|
          Length = 507

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
 Frame = -3

Query: 681 TPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKSGG 502
           +PL+  VF+G L ++F+KS KYSLFD  KEM YIPLD ++K KGKAA+DV+   +GKS G
Sbjct: 397 SPLVIIVFIGGLWHVFAKSVKYSLFDATKEMVYIPLDNEIKTKGKAAVDVMGAKIGKSIG 456

Query: 501 ALIQQFMILSFGSLANSTPY-LGGILLV----IVIAWLGAVRSLDSQFSPLAKQ 355
           A+IQ    +SF    N+    + G+L+V    + I WL  V+ L   ++ + K+
Sbjct: 457 AIIQ---FISFSIFPNAVHNDIAGLLMVTFIIVCILWLYGVKVLSQNYNKMIKR 507



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>TLC2_CHLMU (Q9PJP6) ADP,ATP carrier protein 2 (ADP/ATP translocase 2)|
          Length = 543

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 43/106 (40%), Positives = 72/106 (67%)
 Frame = -3

Query: 687 GMTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKS 508
           G +PL+   ++G +QN+FS++ K++ FD  KEMA+IPL++D K  GKAAID V + +GKS
Sbjct: 396 GFSPLVLTAWLGGVQNVFSRAIKFTYFDQTKEMAFIPLEDDEKDYGKAAIDGVISRVGKS 455

Query: 507 GGALIQQFMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFS 370
           GG+L+ Q +++ F S+A+    +  +LL+ +  W+  V  L  ++S
Sbjct: 456 GGSLVYQALLIIFSSVADCMNAITIVLLLALGGWIWVVAWLGKEYS 501



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>TLCE_RICPR (O05962) ADP,ATP carrier protein 5 (ADP/ATP translocase 5)|
          Length = 500

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = -3

Query: 684 MTPLLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKSG 505
           M+PL  AV +G +QNI +K  KYS++D  +EM YIPLD+++K KGKAA+DV+   +GKS 
Sbjct: 391 MSPLALAVSIGGIQNILAKGTKYSIWDTSREMLYIPLDDELKTKGKAAVDVISAKVGKSS 450

Query: 504 GALIQQ--FMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLA 361
             L+Q   F ++   +  + +P L  +   +  AW+ AVR +  ++  +A
Sbjct: 451 SGLVQSIIFTLVPNATFTSISPILMVVFTFVCFAWIYAVRKIYFEYQKIA 500



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>TLCC_RICPR (Q9ZD67) ADP,ATP carrier protein 3 (ADP/ATP translocase 3)|
          Length = 501

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
 Frame = -3

Query: 675 LLAAVFVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAAIDVVCNPLGKSGGAL 496
           L  A+ VGA+QNI SKS+KYSLFD  KEMAYIPL  +++ KGKAA++V+    GKS GA 
Sbjct: 394 LYVAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAF 453

Query: 495 IQQ--FMILSFGSLANSTPYLGGILLVIVIAWLGAVRSLDSQFSPLAK 358
           IQ   F+I+   +  +   YL  I +V++  W+  +  L+ ++  L +
Sbjct: 454 IQSLIFIIIPTATFDSIIIYLLVIFIVMMNLWIWNIIKLNKEYIKLCQ 501



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>CT112_MOUSE (Q6DIB4) Protein C20orf112 homolog|
          Length = 494

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = -3

Query: 411 AWLGAVRSLDSQFSPLAKQDLEREQKLKAEAVETTAQVVGTGNGSLQENVASQSSTNG 238
           AW+ A   L S  SP  ++ +   Q L ++  + ++   G+GNGS   N ++ SST G
Sbjct: 64  AWMSADPHLASSLSPSQEERMRSPQNLHSQEDDDSSSESGSGNGSSTLNPSTSSSTQG 121



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>CT112_PONPY (Q5RFT9) Protein C20orf112 homolog|
          Length = 436

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 408 WLGAVRSLDSQFSPLAKQDLEREQKLKAEAVETTAQVVGTGNGSLQENVASQSSTNG 238
           W+ A   L S  SP   + +   Q L ++  + ++   G+GNGS   N ++ SST G
Sbjct: 6   WMSADPHLASSLSPSQDERMRSPQNLHSQEDDDSSSESGSGNGSSTLNPSTSSSTQG 62



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>CT112_HUMAN (Q96MY1) Protein C20orf112|
          Length = 436

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 408 WLGAVRSLDSQFSPLAKQDLEREQKLKAEAVETTAQVVGTGNGSLQENVASQSSTNG 238
           W+ A   L S  SP   + +   Q L ++  + ++   G+GNGS   N ++ SST G
Sbjct: 6   WMSADPHLASSLSPSQDERMRSPQNLHSQEDDDSSSESGSGNGSSTLNPSTSSSTQG 62



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>L_NDVB (P11205) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2204

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +2

Query: 371  ENCESRDLTAPNHAMTITSNIPPRYGVELARDPNDKIMNCWIKAPPDFPSGLHTTSIAAL 550
            EN E  DLT+      ITS +P R         +  +++C I+ PP     L       L
Sbjct: 1850 ENTEESDLTSDKAVGYITSAVPYR---------SVSLLHCDIEIPPGSNQSLLDQLAINL 1900

Query: 551  PLTFMSSSK--GMYAISLQGSNKLYFALLLKMFCSAPTK 661
             L  M S +  G+  I +  +   YF LL+ +F    TK
Sbjct: 1901 SLIAMHSVREGGVVIIKVLYAMGYYFHLLMNLFAPCSTK 1939



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>DCR1A_HUMAN (Q6PJP8) DNA cross-link repair 1A protein (hSNM1) (hSNM1A)|
          Length = 1040

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -3

Query: 345 REQKLKAEAVETTAQVVGTGNGSLQENVA-SQSSTNGTVIKQSQEPES 205
           R +K  AEA E     V  GN   Q +VA SQ+S+ G  I+Q+Q+ E+
Sbjct: 49  RNRKRAAEAKEVKDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKET 96



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>LITD_LATMA (Q25338) Delta-latroinsectotoxin precursor (Delta-LIT)|
          Length = 1214

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 269  KMLRARAPQMVRSSNSRKNPKVPPLKNLARSLNKF 165
            +M R   P++V+ +NSR      PLK  +RSLNKF
Sbjct: 1011 EMFRRTLPEIVKETNSR----YLPLKGFSRSLNKF 1041



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>P54_ENTFC (P13692) Protein P54 precursor|
          Length = 516

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 17/57 (29%), Positives = 34/57 (59%)
 Frame = -3

Query: 363 AKQDLEREQKLKAEAVETTAQVVGTGNGSLQENVASQSSTNGTVIKQSQEPESATTE 193
           A++  E+E + +A A     Q + + + + + + A+QSS+     ++S+ PES+TTE
Sbjct: 246 AQEKAEKEAREQAAAQAAQTQALSSASTTTESSSAAQSSS-----EESKAPESSTTE 297



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>HPR1_YEAST (P17629) Protein HPR1|
          Length = 752

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -3

Query: 348 EREQKLKAEAVETTAQVVGTGNGSLQENVASQSSTNGTVIK----QSQEPES 205
           EREQK+K++ + + +Q  G    S Q     + S   T IK     SQ+P+S
Sbjct: 661 EREQKIKSQRINSASQTEGDELKSEQTQPKGEISEENTKIKSSEVSSQDPDS 712



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>BNC2_MOUSE (Q8BMQ3) Zinc finger protein basonuclin-2|
          Length = 1127

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +2

Query: 5    SHEVKLCYNN--RRTGHLIFLVNHSAAFPSSSPWQAQPSNVCFHQKLVLTKFLGM*TY*D 178
            S+ VKL Y N   +  H+  +   +AAFPS        +N+  H+KL LTK L      D
Sbjct: 873  SYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKL-LTKELD-----D 926

Query: 179  FLLDFSVVALS 211
              LD S  +LS
Sbjct: 927  MSLDSSQPSLS 937



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>RP54_CAUCR (Q03408) RNA polymerase sigma-54 factor|
          Length = 497

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -2

Query: 373 LSPGKARSGEGTEAESRGGRNDSPSRWDR 287
           +SPG+  +GEGT+AE  GG+ D    W R
Sbjct: 92  VSPGERATGEGTDAEHAGGQID----WSR 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,588,853
Number of Sequences: 219361
Number of extensions: 2433959
Number of successful extensions: 7052
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7046
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7706249192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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