Clone Name | rbasd18c12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK063785.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-D11, full insert sequence Length = 934 Score = 224 bits (113), Expect = 3e-55 Identities = 188/213 (88%) Strand = Plus / Minus Query: 397 gtttcgttcgcgctagaaggtggaattccacagcgccttgtcgccctcggcgcacttatt 456 |||||| || ||||||||||| | ||||| |||||||| || || |||||||||||||| Sbjct: 563 gtttcggtcacgctagaaggttgcgttccaaagcgccttctccccttcggcgcacttatt 504 Query: 457 gtgcacctcccagatcctgccttccgagttgcatatgccgctgcacttccagtcgaatga 516 |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct: 503 gtgcacctcccagatcctcccctccgagttgcatatgccgctgcatctccagtcgaatga 444 Query: 517 cgccgcgcaggtgttccccgcctgagctttccattcacagtcaggtggggtcccgcaaca 576 ||| ||||||||||||||||||||||||||||| || || ||||| || || || ||||| Sbjct: 443 cgcggcgcaggtgttccccgcctgagctttccactcgcaatcaggcggagtaccacaaca 384 Query: 577 gagtctccggtcatcaatgtgctcgacatctaa 609 ||||||||||| || || |||||||||||||| Sbjct: 383 aagtctccggtcgtcgatatgctcgacatctaa 351 Score = 93.7 bits (47), Expect = 6e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 209 cgccaccggcggacagacgctacgtaaaattgtggtccgcttcgtcggtgt 259 |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 772 cgccaccggcagacagacgctacgtaaaattgtggtccgcttcgtcggtgt 722 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 acagtacaggagatcggtacagaatggccacct 139 |||||||||||||||| |||| |||| |||||| Sbjct: 876 acagtacaggagatcgatacaaaatgaccacct 844
>ref|XM_464214.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 216 bits (109), Expect = 6e-53 Identities = 178/201 (88%) Strand = Plus / Minus Query: 409 ctagaaggtggaattccacagcgccttgtcgccctcggcgcacttattgtgcacctccca 468 ||||||||| | ||||| |||||||| || || |||||||||||||||||||||||||| Sbjct: 1203 ctagaaggttgcgttccaaagcgccttctccccttcggcgcacttattgtgcacctccca 1144 Query: 469 gatcctgccttccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggt 528 |||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 1143 gatcctcccctccgagttgcatatgccgctgcatctccagtcgaatgacgcggcgcaggt 1084 Query: 529 gttccccgcctgagctttccattcacagtcaggtggggtcccgcaacagagtctccggtc 588 ||||||||||||||||||||| || || ||||| || || || ||||| ||||||||||| Sbjct: 1083 gttccccgcctgagctttccactcgcaatcaggcggagtaccacaacaaagtctccggtc 1024 Query: 589 atcaatgtgctcgacatctaa 609 || || |||||||||||||| Sbjct: 1023 gtcgatatgctcgacatctaa 1003
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 397 gtttcgttcgcgctagaaggtggaattccacagcgccttgtcgccctcggcgcacttatt 456 |||||| || ||||||||||| | ||||| |||||||| || || |||||||||||||| Sbjct: 3457164 gtttcggtcacgctagaaggttgcgttccaaagcgccttctccccttcggcgcacttatt 3457105 Query: 457 gtgcacctcccagatcctgccttccgagttgcatatgccgctgcacttccagtcgaatga 516 |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct: 3457104 gtgcacctcccagatcctcccctccgagttgcatatgccgctgcatctccagtcgaatga 3457045 Query: 517 cgccgcgcaggtgttccccgcctgagctttcca 549 ||| ||||||||||||||||||||||||||||| Sbjct: 3457044 cgcggcgcaggtgttccccgcctgagctttcca 3457012 Score = 93.7 bits (47), Expect = 6e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 209 cgccaccggcggacagacgctacgtaaaattgtggtccgcttcgtcggtgt 259 |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3457373 cgccaccggcagacagacgctacgtaaaattgtggtccgcttcgtcggtgt 3457323 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 572 caacagagtctccggtcatcaatgtgctcgacatctaa 609 ||||| ||||||||||| || || |||||||||||||| Sbjct: 3456866 caacaaagtctccggtcgtcgatatgctcgacatctaa 3456829 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgcc 520 |||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 21569869 ccgacttgcatatgccgctgcagctccaatcgaaagacgcc 21569909 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 acagtacaggagatcggtacagaatggccacct 139 |||||||||||||||| |||| |||| |||||| Sbjct: 3457477 acagtacaggagatcgatacaaaatgaccacct 3457445
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 397 gtttcgttcgcgctagaaggtggaattccacagcgccttgtcgccctcggcgcacttatt 456 |||||| || ||||||||||| | ||||| |||||||| || || |||||||||||||| Sbjct: 1959 gtttcggtcacgctagaaggttgcgttccaaagcgccttctccccttcggcgcacttatt 1900 Query: 457 gtgcacctcccagatcctgccttccgagttgcatatgccgctgcacttccagtcgaatga 516 |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct: 1899 gtgcacctcccagatcctcccctccgagttgcatatgccgctgcatctccagtcgaatga 1840 Query: 517 cgccgcgcaggtgttccccgcctgagctttcca 549 ||| ||||||||||||||||||||||||||||| Sbjct: 1839 cgcggcgcaggtgttccccgcctgagctttcca 1807 Score = 93.7 bits (47), Expect = 6e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 209 cgccaccggcggacagacgctacgtaaaattgtggtccgcttcgtcggtgt 259 |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2168 cgccaccggcagacagacgctacgtaaaattgtggtccgcttcgtcggtgt 2118 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 572 caacagagtctccggtcatcaatgtgctcgacatctaa 609 ||||| ||||||||||| || || |||||||||||||| Sbjct: 1661 caacaaagtctccggtcgtcgatatgctcgacatctaa 1624 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 acagtacaggagatcggtacagaatggccacct 139 |||||||||||||||| |||| |||| |||||| Sbjct: 2272 acagtacaggagatcgatacaaaatgaccacct 2240
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 397 gtttcgttcgcgctagaaggtggaattccacagcgccttgtcgccctcggcgcacttatt 456 |||||| || ||||||||||| | ||||| |||||||| || || |||||||||||||| Sbjct: 69987 gtttcggtcacgctagaaggttgcgttccaaagcgccttctccccttcggcgcacttatt 69928 Query: 457 gtgcacctcccagatcctgccttccgagttgcatatgccgctgcacttccagtcgaatga 516 |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct: 69927 gtgcacctcccagatcctcccctccgagttgcatatgccgctgcatctccagtcgaatga 69868 Query: 517 cgccgcgcaggtgttccccgcctgagctttcca 549 ||| ||||||||||||||||||||||||||||| Sbjct: 69867 cgcggcgcaggtgttccccgcctgagctttcca 69835 Score = 93.7 bits (47), Expect = 6e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 209 cgccaccggcggacagacgctacgtaaaattgtggtccgcttcgtcggtgt 259 |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 70196 cgccaccggcagacagacgctacgtaaaattgtggtccgcttcgtcggtgt 70146 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 572 caacagagtctccggtcatcaatgtgctcgacatctaa 609 ||||| ||||||||||| || || |||||||||||||| Sbjct: 69689 caacaaagtctccggtcgtcgatatgctcgacatctaa 69652 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 107 acagtacaggagatcggtacagaatggccacct 139 |||||||||||||||| |||| |||| |||||| Sbjct: 70300 acagtacaggagatcgatacaaaatgaccacct 70268
>dbj|AK072484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C09, full insert sequence Length = 2538 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 397 gtttcgttcgcgctagaaggtggaattccacagcgccttgtcgccctcggcgcacttatt 456 |||||| || ||||||||||| | ||||| |||||||| || || |||||||||||||| Sbjct: 2530 gtttcggtcacgctagaaggttgcgttccaaagcgccttctccccttcggcgcacttatt 2471 Query: 457 gtgcacctcccagatcctgccttccgagttgcatatgccgctgcacttccagtcgaatga 516 |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct: 2470 gtgcacctcccagatcctcccctccgagttgcatatgccgctgcatctccagtcgaatga 2411 Query: 517 cgccgcgcaggtgttccccgcctgagctttcca 549 ||| ||||||||||||||||||||||||||||| Sbjct: 2410 cgcggcgcaggtgttccccgcctgagctttcca 2378 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 572 caacagagtctccggtcatcaatgtgctcgacatctaa 609 ||||| ||||||||||| || || |||||||||||||| Sbjct: 2232 caacaaagtctccggtcgtcgatatgctcgacatctaa 2195
>gb|AY106583.1| Zea mays PCO127308 mRNA sequence Length = 881 Score = 188 bits (95), Expect = 1e-44 Identities = 179/207 (86%) Strand = Plus / Minus Query: 408 gctagaaggtggaattccacagcgccttgtcgccctcggcgcacttattgtgcacctccc 467 ||||||| |||| |||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 508 gctagaaagtggcgttccacagcgccttctcgccctcagcgcacttattgtggacctccc 449 Query: 468 agatcctgccttccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgcagg 527 ||||||| || || ||||||||||||||||||||| |||||||||| ||||| |||||| Sbjct: 448 agatccttccctcggagttgcatatgccgctgcacctccagtcgaacgacgcggcgcaga 389 Query: 528 tgttccccgcctgagctttccattcacagtcaggtggggtcccgcaacagagtctccggt 587 ||||||||||||||| |||||||| || ||||| || || || || || || ||||||| Sbjct: 388 cgttccccgcctgagccttccattcgcaatcaggcggagtgccacagcaaagcctccggt 329 Query: 588 catcaatgtgctcgacatctaacccga 614 |||| || ||||| ||||||| ||||| Sbjct: 328 catcgatatgctcaacatctagcccga 302
>dbj|AK063283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D04, full insert sequence Length = 1750 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 488 catatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagctttc 547 |||||||| ||||| ||||| || |||||| | ||||| || ||||| |||||||||||| Sbjct: 1333 catatgccactgcatttccaatcaaatgacactgcgcatgtattccctgcctgagctttc 1274 Query: 548 cattcacagtcaggtggggtcccgcaacagagtctccggtcatcaatgtgctcgacatct 607 ||||| || |||||||| || || ||||| |||| || |||||||| ||||| |||||| Sbjct: 1273 cattcgcaatcaggtggagtaccacaacaaagtcggcgctcatcaatatgctcaacatct 1214 Query: 608 aa 609 || Sbjct: 1213 aa 1212
>gb|AY107891.1| Zea mays PCO104202 mRNA sequence Length = 1064 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/115 (84%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 498 tgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagctttccattcacagt 557 |||| ||||| ||||| || || ||||||||||| || || |||||||||||||| || | Sbjct: 832 tgcatttccaatcgaangaggcagcgcaggtgttaccagc-tgagctttccattcgcaat 774 Query: 558 caggtggggtcccgcaacagagtctccggtcatcaatgtgctcgacatctaaccc 612 | ||||| || ||||| || ||||| ||||||||||| ||||| ||||||||||| Sbjct: 773 ctggtggagtgccgcagcatagtctgcggtcatcaatatgctcaacatctaaccc 719
>ref|XM_479789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1479 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 1145 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 1086 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 1085 ttccattcgcagtc 1072
>ref|XM_507098.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470F10.14 mRNA Length = 1511 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 1127 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 1068 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 1067 ttccattcgcagtc 1054
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 934877 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 934936 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 934937 ttccattcgcagtc 934950
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 97615 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 97674 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 97675 ttccattcgcagtc 97688
>dbj|AK112114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C12, full insert sequence Length = 1511 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 1127 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 1068 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 1067 ttccattcgcagtc 1054
>dbj|AK111853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011L21, full insert sequence Length = 1479 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| |||||| |||| ||||||||||||||||| ||||| | |||||| ||||| || Sbjct: 1145 ttgcagatgccggtgcagttccagtcgaatgacgctgcgcacgggttcccagcctgcgcc 1086 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 1085 ttccattcgcagtc 1072
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 488 catatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagctttc 547 |||||||| ||||| ||||| || |||||| | ||||| || ||||| |||||||||||| Sbjct: 27895403 catatgccactgcatttccaatcaaatgacactgcgcatgtattccctgcctgagctttc 27895344 Query: 548 cattc 552 ||||| Sbjct: 27895343 cattc 27895339
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 488 catatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagctttc 547 |||||||| ||||| ||||| || |||||| | ||||| || ||||| |||||||||||| Sbjct: 49326 catatgccactgcatttccaatcaaatgacactgcgcatgtattccctgcctgagctttc 49267 Query: 548 cattc 552 ||||| Sbjct: 49266 cattc 49262
>gb|AY105871.1| Zea mays PCO090908 mRNA sequence Length = 1694 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctgagct 544 ||||| ||||| |||| ||||||||||| |||||||| || | |||||| ||||| || Sbjct: 1310 ttgcagatgccagtgcagttccagtcgaaggacgccgcacatgggttcccggcctgccct 1251 Query: 545 ttccattcacagtc 558 |||||||| ||||| Sbjct: 1250 ttccattcgcagtc 1237
>ref|NM_101045.1| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT1G11730 mRNA, complete cds Length = 1155 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 494 ccgctgcacttccagtcgaatgacgccgcgca 525 |||||||| ||||||||||| ||||||||||| Sbjct: 1070 ccgctgcatttccagtcgaacgacgccgcgca 1039
>ref|XM_475253.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1605 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 1514 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 1459
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 114351 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 114406
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 56932 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 56987
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 20801127 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 20801182
>dbj|AK106896.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-H01, full insert sequence Length = 1791 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 1238 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 1183
>dbj|AK070830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065E21, full insert sequence Length = 1394 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 485 ttgcatatgccgctgcacttccagtcgaatgacgccgcgcaggtgttccccgcctg 540 ||||| ||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 1149 ttgcagatgccgctgcaggaccagtcgaaggacgccgcgcacacgttccccgcctg 1094
>gb|AC007296.2|F25C20 Arabidopsis thaliana chromosome 1 BAC F25C20 sequence, complete sequence Length = 91566 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 494 ccgctgcacttccagtcgaatgacgccgcgca 525 |||||||| ||||||||||| ||||||||||| Sbjct: 31409 ccgctgcatttccagtcgaacgacgccgcgca 31440
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgca 525 |||| ||||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 158945 ccgatttgcagatgccgctgcagctccagtcgaacgacgcggcgca 158900
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgca 525 |||| ||||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 20926333 ccgatttgcagatgccgctgcagctccagtcgaacgacgcggcgca 20926378
>emb|CR955034.5| Wallaby DNA sequence from clone GRWB-130P10, complete sequence Length = 176287 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 331 ctagtatacaacaactaacaaa 352 |||||||||||||||||||||| Sbjct: 121217 ctagtatacaacaactaacaaa 121196
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgca 525 |||| ||||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 20919362 ccgatttgcagatgccgctgcagctccagtcgaacgacgcggcgca 20919407
>dbj|AK121292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109K01, full insert sequence Length = 2102 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgca 525 |||| ||||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 1564 ccgatttgcagatgccgctgcagctccagtcgaacgacgcggcgca 1519
>dbj|AK119639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F06, full insert sequence Length = 1690 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgccgcgca 525 |||| ||||| ||||||||||| |||||||||| ||||| ||||| Sbjct: 1117 ccgatttgcagatgccgctgcagctccagtcgaacgacgcggcgca 1072
>ref|XM_466300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgcc 520 |||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 1132 ccgacttgcatatgccgctgcagctccaatcgaaagacgcc 1092
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cgccttcggcgccaccggcgg 220 ||||||||||||||||||||| Sbjct: 338518 cgccttcggcgccaccggcgg 338498
>gb|AC124709.3| Mus musculus BAC clone RP24-83P8 from chromosome 14, complete sequence Length = 195961 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 atctagtatacaacaactaacaaacaaac 357 ||||||||||||| ||| ||||||||||| Sbjct: 7775 atctagtatacaaaaacaaacaaacaaac 7747
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 tcgccttcggcgccaccggcg 219 ||||||||||||||||||||| Sbjct: 259679 tcgccttcggcgccaccggcg 259659
>ref|XM_797952.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503691.9) partial mRNA Length = 3483 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 acaacaactaacaaacaaaccaaca 362 |||||||||||||||||||| |||| Sbjct: 143 acaacaactaacaaacaaacaaaca 119
>emb|AL683873.14| Mouse DNA sequence from clone RP23-119G22 on chromosome 13 Contains part of a novel gene, complete sequence Length = 104602 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 caactaacaaacaaaccaaca 362 ||||||||||||||||||||| Sbjct: 93736 caactaacaaacaaaccaaca 93716
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cgccttcggcgccaccggcgg 220 ||||||||||||||||||||| Sbjct: 339467 cgccttcggcgccaccggcgg 339447
>gb|AC155167.4| Mus musculus BAC clone RP23-309M3 from chromosome 14, complete sequence Length = 159473 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 329 atctagtatacaacaactaacaaacaaac 357 ||||||||||||| ||| ||||||||||| Sbjct: 17734 atctagtatacaaaaacaaacaaacaaac 17762
>gb|AE012486.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 394 of 460 of the complete genome Length = 10508 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccttcttcgccttcgccttcg 207 ||||||||||||||||||||| Sbjct: 5441 ccttcttcgccttcgccttcg 5421
>gb|AE012225.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 133 of 460 of the complete genome Length = 10544 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cagcgccttgtcgccctcggc 447 ||||||||||||||||||||| Sbjct: 7614 cagcgccttgtcgccctcggc 7594
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccttcttcgccttcgccttcg 207 ||||||||||||||||||||| Sbjct: 4412833 ccttcttcgccttcgccttcg 4412813 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cagcgccttgtcgccctcggc 447 ||||||||||||||||||||| Sbjct: 3566414 cagcgccttgtcgccctcggc 3566434
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccttcttcgccttcgccttcg 207 ||||||||||||||||||||| Sbjct: 33803205 ccttcttcgccttcgccttcg 33803185
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 480 ccgagttgcatatgccgctgcacttccagtcgaatgacgcc 520 |||| ||||||||||||||||| |||| ||||| |||||| Sbjct: 58819 ccgacttgcatatgccgctgcagctccaatcgaaagacgcc 58859
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccttcttcgccttcgccttcg 207 ||||||||||||||||||||| Sbjct: 42252 ccttcttcgccttcgccttcg 42232
>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9, complete sequence Length = 182412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 agctatacctacaggatgaat 305 ||||||||||||||||||||| Sbjct: 26479 agctatacctacaggatgaat 26459
>emb|BX005272.6| Zebrafish DNA sequence from clone DKEY-23D7, complete sequence Length = 215838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aacaactaacaaacaaaccaa 360 ||||||||||||||||||||| Sbjct: 157569 aacaactaacaaacaaaccaa 157549
>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete sequence Length = 181014 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccttcttcgccttcgccttcg 207 ||||||||||||||||||||| Sbjct: 52570 ccttcttcgccttcgccttcg 52550
>emb|AL645688.12| Mouse DNA sequence from clone RP23-54N20 on chromosome 11, complete sequence Length = 123115 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 atacaacaactaacaaacaaa 356 ||||||||||||||||||||| Sbjct: 92847 atacaacaactaacaaacaaa 92867
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 108066 cttcttcgccttcgccttcg 108047
>ref|XM_521390.1| PREDICTED: Pan troglodytes similar to adhesion-type protein ADMLX - human (LOC465990), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tcccagatcctgccttccga 483 |||||||||||||||||||| Sbjct: 1315 tcccagatcctgccttccga 1334
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 78547 cttcttcgccttcgccttcg 78528
>ref|XM_329540.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttcttcgccttcgcctt 205 |||||||||||||||||||| Sbjct: 3240 cccttcttcgccttcgcctt 3259
>ref|XM_958332.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttcttcgccttcgcctt 205 |||||||||||||||||||| Sbjct: 3240 cccttcttcgccttcgcctt 3259
>gb|AE007280.1| Sinorhizobium meliloti 1021 plasmid pSymA section 86 of 121 of the complete plasmid sequence Length = 11391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 caggagatcggtacagaatg 132 |||||||||||||||||||| Sbjct: 3042 caggagatcggtacagaatg 3061
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 4279 cttcttcgccttcgccttcg 4298
>ref|XM_713574.1| Candida albicans SC5314 putative protein kinase (CaO19_7510), mRNA Length = 3639 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tcagccattcccagaaccaaaacc 282 ||||||||| |||||||||||||| Sbjct: 1782 tcagccattgccagaaccaaaacc 1805
>emb|BX927257.11| Zebrafish DNA sequence from clone CH211-122I22 in linkage group 6, complete sequence Length = 133388 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acaacaactaacaaacaaac 357 |||||||||||||||||||| Sbjct: 47783 acaacaactaacaaacaaac 47764
>gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosome 16, complete sequence Length = 180726 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 331 ctagtatacaacaactaacaaacaaaccaaca 362 ||||||||||| ||| ||||||||||| |||| Sbjct: 78269 ctagtatacaaaaacaaacaaacaaacaaaca 78300
>gb|AY151052.1| Aequorea coerulescens green fluorescent protein mRNA, complete cds Length = 941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagctgttacaaactcaaaa 34 |||||||||||||||||||| Sbjct: 745 cagctgttacaaactcaaaa 726
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cttcgccttcgccttcggcg 210 |||||||||||||||||||| Sbjct: 370191 cttcgccttcgccttcggcg 370210
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttcttcgccttcgcctt 205 |||||||||||||||||||| Sbjct: 14293 cccttcttcgccttcgcctt 14312
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccattcccagaaccaaaacc 282 |||||||||||||||||||| Sbjct: 144141 ccattcccagaaccaaaacc 144160
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cccttcttcgccttcgcctt 205 |||||||||||||||||||| Sbjct: 29747 cccttcttcgccttcgcctt 29728
>emb|BX530017.13| Zebrafish DNA sequence from clone CH211-242H13 in linkage group 6, complete sequence Length = 164713 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aactaacaaacaaaccaaca 362 |||||||||||||||||||| Sbjct: 109896 aactaacaaacaaaccaaca 109915
>gb|DQ397560.1| Cenarchaeum symbiosum clone C01A04, complete sequence Length = 40230 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccggtcatacatctggggca 101 |||||||||||||||||||| Sbjct: 12891 ccggtcatacatctggggca 12910
>emb|BX571886.9| Zebrafish DNA sequence from clone DKEY-257C10 in linkage group 15, complete sequence Length = 178049 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agctgttacaaactcaaaac 35 |||||||||||||||||||| Sbjct: 43314 agctgttacaaactcaaaac 43295
>emb|BX005385.13| Zebrafish DNA sequence from clone DKEY-180N16, complete sequence Length = 159174 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 caactaacaaacaaaccaac 361 |||||||||||||||||||| Sbjct: 67346 caactaacaaacaaaccaac 67365
>gb|AC107990.5| Homo sapiens chromosome 18, clone RP11-103A19, complete sequence Length = 166109 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aactaacaaacaaaccaaca 362 |||||||||||||||||||| Sbjct: 161584 aactaacaaacaaaccaaca 161565
>gb|AC092437.4| Homo sapiens BAC clone RP11-326I19 from 4, complete sequence Length = 203583 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tccattcacagtcaggtggg 565 |||||||||||||||||||| Sbjct: 94135 tccattcacagtcaggtggg 94154
>gb|AY065986.1| Mycoplasma gallisepticum strain S6PFM macrophage-activating lipoprotein-like protein (p47) gene, complete cds Length = 1795 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tacaacaactaacaaacaaa 356 |||||||||||||||||||| Sbjct: 1448 tacaacaactaacaaacaaa 1467
>gb|AC182430.2| Pan troglodytes BAC clone CH251-398I16 from chromosome 4, complete sequence Length = 145600 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 caacatttttccaccaaaagaatg 164 |||||||||||||||||| ||||| Sbjct: 50914 caacatttttccaccaaatgaatg 50891
>gb|AC098847.4| Homo sapiens chromosome 18, clone RP11-824M15, complete sequence Length = 206693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aactaacaaacaaaccaaca 362 |||||||||||||||||||| Sbjct: 130380 aactaacaaacaaaccaaca 130399
>gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, complete sequence Length = 183599 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 caacaactaacaaacaaaccaaca 362 ||||||| |||||||||||||||| Sbjct: 143477 caacaaccaacaaacaaaccaaca 143454
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ccttcgccttcggcgccaccggcg 219 ||||||||| |||||||||||||| Sbjct: 1422695 ccttcgcctccggcgccaccggcg 1422718
>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence Length = 204400 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 107304 cttcttcgccttcgccttcg 107285
>dbj|AK051392.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130045N01 product:unclassifiable, full insert sequence Length = 3735 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tgagcctcagctgttacaaa 27 |||||||||||||||||||| Sbjct: 1177 tgagcctcagctgttacaaa 1196
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 3496055 cttcttcgccttcgccttcg 3496036
>gb|AY065985.1| Mycoplasma gallisepticum strain ts-11 DNA repair and recombination protein (recR) gene, partial cds; macrophage-activating lipoprotein-like protein (p47) gene, complete cds; and hemagglutinin (vlhA) gene, partial cds Length = 3894 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tacaacaactaacaaacaaa 356 |||||||||||||||||||| Sbjct: 1792 tacaacaactaacaaacaaa 1811
>gb|AC093755.2| Homo sapiens BAC clone RP11-55C6 from 4, complete sequence Length = 146673 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 caacatttttccaccaaaagaatg 164 |||||||||||||||||| ||||| Sbjct: 142931 caacatttttccaccaaatgaatg 142908
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tgagcctcagctgttacaaa 27 |||||||||||||||||||| Sbjct: 100627 tgagcctcagctgttacaaa 100608
>gb|AC003029.5| Homo sapiens 12 PAC RP3-462E2 (Roswell Park Cancer institute Human PAC Library) complete sequence Length = 137830 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aactaacaaacaaaccaaca 362 |||||||||||||||||||| Sbjct: 54370 aactaacaaacaaaccaaca 54351
>ref|NM_001003500.1| Danio rerio si:dkey-204f11.62 (si:dkey-204f11.62), mRNA Length = 1625 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acaaactcaaaactagccca 42 |||||||||||||||||||| Sbjct: 1432 acaaactcaaaactagccca 1413
>emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 in linkage group 7, complete sequence Length = 102546 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 acaacaactaacaaacaaac 357 |||||||||||||||||||| Sbjct: 13705 acaacaactaacaaacaaac 13724
>dbj|AK107686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-B04, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 576 cttcttcgccttcgccttcg 557
>ref|NM_209847.1| Eremothecium gossypii ADR399Cp (ADR399C), mRNA Length = 2211 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ccttcgccttcggcgccaccggcg 219 ||||||||| |||||||||||||| Sbjct: 154 ccttcgcctccggcgccaccggcg 131
>dbj|AK068306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H07, full insert sequence Length = 1612 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 937 cttcttcgccttcgccttcg 918
>gb|BC078353.1| Danio rerio si:dkey-204f11.62, mRNA (cDNA clone MGC:91967 IMAGE:7041918), complete cds Length = 1625 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acaaactcaaaactagccca 42 |||||||||||||||||||| Sbjct: 1432 acaaactcaaaactagccca 1413
>emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in linkage group 3, complete sequence Length = 247387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acaaactcaaaactagccca 42 |||||||||||||||||||| Sbjct: 64601 acaaactcaaaactagccca 64582
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome Length = 996422 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tacaacaactaacaaacaaa 356 |||||||||||||||||||| Sbjct: 826860 tacaacaactaacaaacaaa 826841
>emb|AL929138.15| Mouse DNA sequence from clone RP23-395O2 on chromosome 2, complete sequence Length = 100984 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 aacaaacaaaccaacaggag 366 |||||||||||||||||||| Sbjct: 43500 aacaaacaaaccaacaggag 43481
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 3496000 cttcttcgccttcgccttcg 3495981
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 187848 cttcttcgccttcgccttcg 187867
>emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17, complete sequence Length = 154808 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aactaacaaacaaaccaaca 362 |||||||||||||||||||| Sbjct: 1341 aactaacaaacaaaccaaca 1322
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 10983 cttcttcgccttcgccttcg 10964
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 35860 cttcttcgccttcgccttcg 35879
>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence Length = 198005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 caactaacaaacaaaccaac 361 |||||||||||||||||||| Sbjct: 129806 caactaacaaacaaaccaac 129787
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cttcttcgccttcgccttcg 207 |||||||||||||||||||| Sbjct: 50962 cttcttcgccttcgccttcg 50943
>gb|U90220.1|SMU90220 Sinorhizobium meliloti SyrB gene, complete cds Length = 5351 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 caggagatcggtacagaatg 132 |||||||||||||||||||| Sbjct: 310 caggagatcggtacagaatg 291 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,162,660 Number of Sequences: 3902068 Number of extensions: 5162660 Number of successful extensions: 107311 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106568 Number of HSP's gapped (non-prelim): 742 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)