ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ADF_LILLO (P30175) Actin-depolymerizing factor (ADF) 41 2e-05
2ADFX_ARATH (Q9LQ81) Actin-depolymerizing factor-like At1g01750 (... 40 3e-05
3ADF3_ARATH (Q9ZSK4) Actin-depolymerizing factor 3 (ADF 3) (AtADF3) 39 4e-05
4ADF2_PETHY (Q9FVI1) Actin-depolymerizing factor 2 (ADF 2) 37 1e-04
5ADF2_MAIZE (Q43694) Actin-depolymerizing factor 2 (ADF 2) (ZmABP... 39 1e-04
6ADF4_ARATH (Q9ZSK3) Actin-depolymerizing factor 4 (ADF-4) (AtADF4) 38 1e-04
7ADF2_ARATH (Q39251) Actin-depolymerizing factor 2 (ADF-2) (AtADF2) 37 1e-04
8ADF1_ARATH (Q39250) Actin-depolymerizing factor 1 (ADF-1) (AtADF1) 37 2e-04
9ADF1_PETHY (Q9FVI2) Actin-depolymerizing factor 1 (ADF 1) 36 2e-04
10ADF_BRANA (P30174) Actin depolymerizing factor (ADF) (Fragment) 40 2e-04
11ADF1_MAIZE (P46251) Actin-depolymerizing factor 1 (ADF 1) (ZmABP... 37 2e-04
12ADF3_MAIZE (Q41764) Actin-depolymerizing factor 3 (ADF 3) (ZmABP... 39 5e-04
13ADF_VITVI (Q8SAG3) Actin-depolymerizing factor (ADF) 37 0.020
14ACTP_ACACA (P37167) Actophorin 34 0.031
15ADF6_ARATH (Q9ZSK2) Actin-depolymerizing factor 6 (ADF-6) (AtADF6) 35 0.059
16ADF5_ARATH (Q9ZNT3) Actin-depolymerizing factor 5 (ADF-5) (AtADF5) 33 0.22
17YCG9_YEAST (P25594) Hypothetical transport protein YCL069W 30 1.9
18ASIP_HORSE (Q95MP2) Agouti signaling protein precursor (ASP) (Ag... 30 1.9
19YK85_YEAST (P36172) Hypothetical transport protein YKR105C 30 1.9
20Y1594_HAEIN (P44265) Hypothetical protein HI1594 30 1.9
21SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ... 29 4.2
22ZN333_HUMAN (Q96JL9) Zinc finger protein 333 29 4.2
23ACES_CHICK (P36196) Acetylcholinesterase precursor (EC 3.1.1.7) ... 29 4.2
24SYM_PARUW (Q6MDG0) Methionyl-tRNA synthetase (EC 6.1.1.10) (Meth... 29 4.2
25CADF_DROME (P45594) Cofilin/actin-depolymerizing factor homolog ... 24 4.9
26COFI_SCHPO (P78929) Cofilin 26 6.4
27NHR89_CAEEL (O02235) Nuclear hormone receptor family member nhr-89 28 7.2
28SRK1_SCHPO (O94547) Serine/threonine-protein kinase srk1 (EC 2.7... 28 9.4
29RS10_STRR6 (P66340) 30S ribosomal protein S10 28 9.4
30RS10_STRPN (P66339) 30S ribosomal protein S10 28 9.4
31RS10_STRP8 (P66343) 30S ribosomal protein S10 28 9.4
32RS10_STRP6 (Q5XED6) 30S ribosomal protein S10 28 9.4
33RS10_STRP3 (P66342) 30S ribosomal protein S10 28 9.4
34RS10_STRP1 (P66341) 30S ribosomal protein S10 28 9.4
35RS10_STRA5 (P66345) 30S ribosomal protein S10 28 9.4
36RS10_STRA3 (P66344) 30S ribosomal protein S10 28 9.4
37PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC) 28 9.4
38TRMD_ANASP (Q8YQF1) tRNA (guanine-N(1)-)-methyltransferase (EC 2... 28 9.4
39CHEB3_GEOSL (P62640) Chemotaxis response regulator protein-gluta... 28 9.4 
>ADF_LILLO (P30175) Actin-depolymerizing factor (ADF)|
          Length = 139

 Score = 40.8 bits (94), Expect(2) = 2e-05
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GIQ+E+QATDPSE+S+D+IK RA
Sbjct: 116 GIQVELQATDPSEMSMDIIKARA 138



 Score = 25.8 bits (55), Expect(2) = 2e-05
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDT++VRSKM YA    R +RE+
Sbjct: 92  PDTSRVRSKMLYASTKDRFKREL 114
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>ADFX_ARATH (Q9LQ81) Actin-depolymerizing factor-like At1g01750 (ADF-like)|
          Length = 140

 Score = 40.0 bits (92), Expect(2) = 3e-05
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QATDPSE+SLD+IK R +
Sbjct: 116 GIQVELQATDPSEMSLDIIKGRVN 139



 Score = 25.8 bits (55), Expect(2) = 3e-05
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDT++VRSKM YA    R +RE+
Sbjct: 92  PDTSRVRSKMLYASSKDRFKREL 114
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>ADF3_ARATH (Q9ZSK4) Actin-depolymerizing factor 3 (ADF 3) (AtADF3)|
          Length = 139

 Score = 38.5 bits (88), Expect(2) = 4e-05
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QATDP+E+ LDV K RA+
Sbjct: 116 GIQVELQATDPTEMDLDVFKSRAN 139



 Score = 26.9 bits (58), Expect(2) = 4e-05
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTA+VRSKM YA    R +RE+
Sbjct: 92  PDTARVRSKMIYASSKDRFKREL 114
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>ADF2_PETHY (Q9FVI1) Actin-depolymerizing factor 2 (ADF 2)|
          Length = 143

 Score = 37.0 bits (84), Expect(2) = 1e-04
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GIQ+E+QATDP+E+ LDV + RA
Sbjct: 116 GIQVELQATDPTEMGLDVFRSRA 138



 Score = 26.9 bits (58), Expect(2) = 1e-04
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTA+VRSKM YA    R +RE+
Sbjct: 92  PDTARVRSKMIYASSKDRFKREL 114
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>ADF2_MAIZE (Q43694) Actin-depolymerizing factor 2 (ADF 2) (ZmABP2) (ZmADF2)|
          Length = 139

 Score = 38.5 bits (88), Expect(2) = 1e-04
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ E+QATDPSE+SLD++K R +
Sbjct: 116 GIQCEIQATDPSEMSLDIVKSRTN 139



 Score = 25.4 bits (54), Expect(2) = 1e-04
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTA+ RSKM YA    R +RE+
Sbjct: 92  PDTARTRSKMLYASSKDRFRREL 114
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>ADF4_ARATH (Q9ZSK3) Actin-depolymerizing factor 4 (ADF-4) (AtADF4)|
          Length = 139

 Score = 37.7 bits (86), Expect(2) = 1e-04
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QATDP+E+ LDV+K R +
Sbjct: 116 GIQVELQATDPTEMDLDVLKSRVN 139



 Score = 26.2 bits (56), Expect(2) = 1e-04
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PD AKVRSKM YA    R +RE+
Sbjct: 92  PDVAKVRSKMIYASSKDRFKREL 114
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>ADF2_ARATH (Q39251) Actin-depolymerizing factor 2 (ADF-2) (AtADF2)|
          Length = 137

 Score = 37.0 bits (84), Expect(2) = 1e-04
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QATDP+E+ LDV K R +
Sbjct: 114 GIQVELQATDPTEMGLDVFKSRTN 137



 Score = 26.6 bits (57), Expect(2) = 1e-04
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTAKVR KM YA    R +RE+
Sbjct: 90  PDTAKVRDKMIYASSKDRFKREL 112
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>ADF1_ARATH (Q39250) Actin-depolymerizing factor 1 (ADF-1) (AtADF1)|
          Length = 139

 Score = 37.4 bits (85), Expect(2) = 2e-04
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QATDP+E+ LDV + RA+
Sbjct: 116 GIQVELQATDPTEMDLDVFRSRAN 139



 Score = 25.8 bits (55), Expect(2) = 2e-04
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PD AKVRSKM YA    R +RE+
Sbjct: 92  PDIAKVRSKMIYASSKDRFKREL 114
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>ADF1_PETHY (Q9FVI2) Actin-depolymerizing factor 1 (ADF 1)|
          Length = 139

 Score = 36.2 bits (82), Expect(2) = 2e-04
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ+E+QA DP+E+ LDVI+ RA+
Sbjct: 116 GIQVELQACDPTEMGLDVIQSRAN 139



 Score = 26.9 bits (58), Expect(2) = 2e-04
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTA+VRSKM YA    R +RE+
Sbjct: 92  PDTARVRSKMIYASSKDRFKREL 114
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>ADF_BRANA (P30174) Actin depolymerizing factor (ADF) (Fragment)|
          Length = 126

 Score = 40.4 bits (93), Expect(2) = 2e-04
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GIQ+E+QATDPSE+S D+IK RA
Sbjct: 103 GIQVELQATDPSEMSFDIIKSRA 125



 Score = 22.7 bits (47), Expect(2) = 2e-04
 Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PD+++VR KM YA    R +RE+
Sbjct: 79  PDSSRVRMKMVYASSKDRFKREL 101
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>ADF1_MAIZE (P46251) Actin-depolymerizing factor 1 (ADF 1) (ZmABP1) (ZmADF1)|
          Length = 139

 Score = 37.4 bits (85), Expect(2) = 2e-04
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GIQ E+QATDPSE+SLD+++ R +
Sbjct: 116 GIQCEIQATDPSEMSLDIVRSRTN 139



 Score = 25.4 bits (54), Expect(2) = 2e-04
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA----RHQREV 371
           PDTA+ RSKM YA    R +RE+
Sbjct: 92  PDTARTRSKMLYASSKDRFRREL 114
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>ADF3_MAIZE (Q41764) Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3)|
          Length = 139

 Score = 38.9 bits (89), Expect(2) = 5e-04
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GIQ+E+QATD SEISLD IK+RA
Sbjct: 116 GIQVELQATDASEISLDEIKDRA 138



 Score = 22.7 bits (47), Expect(2) = 5e-04
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA 389
           P +AKV+SKM YA
Sbjct: 92  PSSAKVKSKMLYA 104
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>ADF_VITVI (Q8SAG3) Actin-depolymerizing factor (ADF)|
          Length = 143

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           G+  E+QATDP+E+ L+V++ERAH
Sbjct: 120 GVHYEIQATDPTEMDLEVLRERAH 143
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>ACTP_ACACA (P37167) Actophorin|
          Length = 137

 Score = 34.3 bits (77), Expect(2) = 0.031
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GIQ+E+QATD +EIS D + ERA
Sbjct: 110 GIQVEVQATDAAEISEDAVSERA 132



 Score = 21.2 bits (43), Expect(2) = 0.031
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 427 PDTAKVRSKMTYARHQREVQE 365
           PD+A ++SKM Y   +  +++
Sbjct: 86  PDSAPIKSKMMYTSTKDSIKK 106
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>ADF6_ARATH (Q9ZSK2) Actin-depolymerizing factor 6 (ADF-6) (AtADF6)|
          Length = 146

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERAH 282
           GI  E+QATDP+E+ L+V++ERA+
Sbjct: 123 GIHYEIQATDPTEVDLEVLRERAN 146
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>ADF5_ARATH (Q9ZNT3) Actin-depolymerizing factor 5 (ADF-5) (AtADF5)|
          Length = 143

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKERA 285
           GI  E+QATDP+E+  D+I++RA
Sbjct: 120 GIHYELQATDPTEMGFDIIQDRA 142
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>YCG9_YEAST (P25594) Hypothetical transport protein YCL069W|
          Length = 458

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
 Frame = -2

Query: 234 LTATWIYYVNYRFGGVTLETFLMIC-----GFVTVSKDPRGETTTRSCSKFYHVIR---- 82
           +T  W +Y+N   GG+ +  FL+       G +   KD  G  ++ + SKF H +     
Sbjct: 64  VTWRWCFYINLPIGGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRL 123

Query: 81  ---SFFRCPFICRALC 43
                F+  F   ALC
Sbjct: 124 MNGIIFKFDFFGFALC 139
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>ASIP_HORSE (Q95MP2) Agouti signaling protein precursor (ASP) (Agouti switch|
           protein)
          Length = 133

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 421 TAKVRSKMTYARHQREVQEDPGXASRSRCRPPTPA 317
           ++K ++ MT     R +Q  P  A+R  C+PP PA
Sbjct: 73  SSKKKASMTKVARPRLLQPAPCVATRDSCKPPAPA 107
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>YK85_YEAST (P36172) Hypothetical transport protein YKR105C|
          Length = 582

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
 Frame = -2

Query: 234 LTATWIYYVNYRFGGVTLETFLMIC-----GFVTVSKDPRGETTTRSCSKFYHVIR---- 82
           +T  W +Y+N   GG+ +  FL+       G +   KD  G  ++ + SKF H +     
Sbjct: 188 VTWRWCFYINLPIGGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRL 247

Query: 81  ---SFFRCPFICRALC 43
                F+  F   ALC
Sbjct: 248 MNGIIFKFDFFGFALC 263
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>Y1594_HAEIN (P44265) Hypothetical protein HI1594|
          Length = 223

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = -2

Query: 282 LGRQTNHPSNALPFGRLTATWIYYVNYRFGGVTLETFLMICGFVTVSKDPRGETTTRSCS 103
           L   T + S  +  G L   W Y V  +FG + +   L + GF+  S    G +  R   
Sbjct: 14  LSSNTFYLSGGVLGGSLVVNWFYPVLGKFGSILIGFVLALIGFIFCS----GTSLIRLIV 69

Query: 102 KFYH 91
            FYH
Sbjct: 70  TFYH 73
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>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
           (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
           (SH3P12)
          Length = 1290

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -1

Query: 370 QEDPGXASRSRCRPPTPAKSAWT*SRSAHTRAANQPS 260
           QE P   S+S   P  P+   W  S SA T    QPS
Sbjct: 60  QESPKHESKSGLEPEDPSADEWKLSSSADTNGNAQPS 96
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>ZN333_HUMAN (Q96JL9) Zinc finger protein 333|
          Length = 665

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 383 PTRSSRGPWTGIQIEMQATDPSEISLDVIKERAH*GGKPT 264
           PT   R PW      + A DP+ +  D ++E A   G PT
Sbjct: 157 PTLGHRNPWVARDSAVPARDPAWLQEDKVEEEAMAPGLPT 196
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>ACES_CHICK (P36196) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 767

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
 Frame = -1

Query: 340 RCRPPTPAKSAWT*SRSAHTRA--------ANQPSIQCSALWTPHGDMDLLC-QL*IW 194
           R RPP P  + WT  R A ++            P  Q S +W P+ +M   C  L +W
Sbjct: 70  RFRPPLPIPTPWTGIRDADSQPFACYQMVDTTFPGFQGSEMWNPNREMSEDCLYLNVW 127
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>SYM_PARUW (Q6MDG0) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 698

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
 Frame = -2

Query: 264 HPSNALPFGRLTATWIYYVNY-RFGGVTLETFLMICGF------VTVSKDPRGETTTRSC 106
           + +  L FG +   ++    Y RF  +  +  L ICG       +T+S D  G T     
Sbjct: 22  YANGPLHFGHIAGAYLPADCYARFQRLMKKDVLYICGSDEYGIAITLSADLAGRTPQEHV 81

Query: 105 SKFYHVIRSFF 73
             F+H+ +SFF
Sbjct: 82  DLFHHINQSFF 92
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>CADF_DROME (P45594) Cofilin/actin-depolymerizing factor homolog (Protein D61)|
           (Protein twinstar)
          Length = 148

 Score = 23.9 bits (50), Expect(2) = 4.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 353 GIQIEMQATDPSEISLDVIKER 288
           G+Q  +QATD SE S + ++E+
Sbjct: 120 GVQKYIQATDLSEASREAVEEK 141



 Score = 23.9 bits (50), Expect(2) = 4.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA 389
           PDTAKV+ KM Y+
Sbjct: 96  PDTAKVKKKMLYS 108
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>COFI_SCHPO (P78929) Cofilin|
          Length = 137

 Score = 26.2 bits (56), Expect(2) = 6.4
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 368 RGPWTGIQIEMQATDPSEISLDVIKER 288
           R  +TGI  ++QATD SE++ + + E+
Sbjct: 107 RRAFTGIGTDIQATDFSEVAYETVLEK 133



 Score = 21.2 bits (43), Expect(2) = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 427 PDTAKVRSKMTYA 389
           PD A ++SKM Y+
Sbjct: 88  PDVAPIKSKMVYS 100
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>NHR89_CAEEL (O02235) Nuclear hormone receptor family member nhr-89|
          Length = 310

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -2

Query: 165 ICGFVTVSKDPRGETTTRSCSKFYHVIRSFFRCPFICRALCCCTVL 28
           +C  V  ++   G T   SCS F+   R    C F C A   CT+L
Sbjct: 10  VCHSVKGTRRHFGITACMSCSSFF---RRSLNCKFYCPANNSCTIL 52
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>SRK1_SCHPO (O94547) Serine/threonine-protein kinase srk1 (EC 2.7.11.1)|
           (Sty1-regulated kinase 1)
          Length = 580

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 409 RSKMTYARHQREVQEDPGXASRSRCRPPTPAK 314
           + K  +A     V E+P   SRS+C+ PT  K
Sbjct: 61  KPKSRHAHFHETVHENPSEYSRSKCKQPTNEK 92
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>RS10_STRR6 (P66340) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K +IDI+NP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLIDIVNPTQK 82
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>RS10_STRPN (P66339) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K +IDI+NP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLIDIVNPTQK 82
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>RS10_STRP8 (P66343) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>RS10_STRP6 (Q5XED6) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>RS10_STRP3 (P66342) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>RS10_STRP1 (P66341) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>RS10_STRA5 (P66345) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>RS10_STRA3 (P66344) 30S ribosomal protein S10|
          Length = 102

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 IFRHGNKATNHQESFKSHTAKSIIDIINPCRR 231
           I R  +K  + +E F+  T K ++DIINP ++
Sbjct: 51  IIRATHKYKDSREQFEMRTHKRLVDIINPTQK 82
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>PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1434

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 381  NEKFKRTLDXHPDRDAGHRPQ---RNQPGRDQGARTLGRQTNHPSNALP 244
            N  F R+   HPD  + H+P    R QP  D G+ + GRQ   P    P
Sbjct: 1247 NPVFARSTVVHPD--SRHQPPLTPRQQPHLDSGSLSPGRQGQQPRRDPP 1293
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>TRMD_ANASP (Q8YQF1) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 252

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 378 EKFKRTLDXHPDRDAGHRPQRNQPGRDQGARTLG 277
           ++ KRT D  PD     + ++ Q  R+QGAR  G
Sbjct: 209 QQIKRTSDRRPDLLEKWQQEKKQGSREQGAREAG 242
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>CHEB3_GEOSL (P62640) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 3 operon (EC 3.1.1.61)
          Length = 371

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
 Frame = -3

Query: 431 VPRHRKGEEQDDVRKAPTRSSRGPWTGIQIEMQATDPSEIS-LDVIKERAH*GGKPTIHP 255
           + R  + +E+  V      S   P+    +  ++T P     L+V+   A  GG P +  
Sbjct: 136 IVRREREQERASVAAGRRTSGSAPYAKAAVRTESTAPRPAGRLEVVAIGASTGGPPALQR 195

Query: 254 MLCPLDASRRHGFIMS 207
           +LC L  +     ++S
Sbjct: 196 ILCALPGAFPQAVVVS 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,579,253
Number of Sequences: 219361
Number of extensions: 1445774
Number of successful extensions: 3751
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3750
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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