>gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full insert mRNA
           sequence
          Length = 2114

 Score =  216 bits (109), Expect = 5e-53
 Identities = 138/145 (95%), Gaps = 2/145 (1%)
 Strand = Plus / Plus

                                                                       
Query: 280 tagtgtgcgcgctccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatc 339
           ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 288 tagtgcgcgcgctccttgatcacgtcgaggctcatttcgctggggtcggtggcctgcatc 347

                                                                       
Query: 340 tcgatctggatgccngtccagggtcctcttgaacttctcgttggtgccttgcgtacgtca 399
           |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 348 tcgatctggatgcc-gtccagggtcctcttgaacttctcgttggtg-ctcgcgtacgtca 405

                                    
Query: 400 tcttgctcctcacctttgcggtgtc 424
           ||||||||||||||||||| |||||
Sbjct: 406 tcttgctcctcacctttgccgtgtc 430



 Score =  145 bits (73), Expect = 1e-31
 Identities = 76/77 (98%)
 Strand = Plus / Plus

                                                                       
Query: 138 ctttcgacacggtaacaaagccacaaatcatcaagaaagtttcaagagtcacaccgccaa 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctttcgacacggtaacaaagccacaaatcatcaagaaagtttcaagagtcacaccgccaa 237

                            
Query: 198 atctataattgacataa 214
           ||||||| |||||||||
Sbjct: 238 atctatatttgacataa 254



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 90/104 (86%), Gaps = 7/104 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   catttaattatttataaccg-aacttggaagaacagtgcag-----cagcataacgcccg 54
           |||||||||||||||||||| ||||||||||||||||||||     |||||||| |||||
Sbjct: 36  catttaattatttataaccgtaacttggaagaacagtgcagtgcagcagcataaggcccg 95

                                                       
Query: 55  gcatataaatgggcagcggaagaaggaacggattacatgataga 98
           |||||| ||||||||   ||| || |||| ||||||||||||||
Sbjct: 96  gcatatcaatgggcacaagaa-aaagaacagattacatgataga 138

>ref|XM_470137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 703

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 292 tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctgga 349
           ||||||| |||||| ||| |||  ||||||||||||||||||||||  ||||||||||
Sbjct: 533 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctgga 476

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 292      tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctgga 349
                ||||||| |||||| ||| |||  ||||||||||||||||||||||  ||||||||||
Sbjct: 34127301 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctgga 34127244

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 292      tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctgga 349
                ||||||| |||||| ||| |||  ||||||||||||||||||||||  ||||||||||
Sbjct: 34217773 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctgga 34217716

>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 292   tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctgga 349
             ||||||| |||||| ||| |||  ||||||||||||||||||||||  ||||||||||
Sbjct: 91113 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctgga 91056

>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
              hypothetical protein, putative NAM protein, putative
              cis-zeatin O-glucosyltransferases, putative small nuclear
              ribonucleoprotein, putative cis-zeatin
              O-glucosyltransferase, putative glutathione peroxidase,
              putative copper-exporting ATPases, putative
              serine/threonine dehydratase, and putative actin
              depolymerizing factor genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 157237

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 101/122 (82%), Gaps = 2/122 (1%)
 Strand = Plus / Minus

                                                                          
Query: 303    gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccngtccaggg 362
              ||||| ||| || |||||||||||||||||||||| ||| | ||||||||| ||||||  
Sbjct: 148416 gtccatgctcatctcgctggggtcggtggcctgcagctccacctggatgcc-gtccagct 148358

                                                                          
Query: 363    tcctcttgaacttctcgttggtgccttgcgtacgtcatcttgctcctcacctttgcggtg 422
               ||||||||||   || |||| | || ||||||  |||||||||||||||||| | ||||
Sbjct: 148357 ccctcttgaaccggtccttggag-ctcgcgtacagcatcttgctcctcaccttcgaggtg 148299

                
Query: 423    tc 424
              ||
Sbjct: 148298 tc 148297

>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor
          Length = 589

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 307 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgcc 353
           ||||| || |||||||||||||||||||| ||||||  |||||||||
Sbjct: 474 aggctcatctcgctggggtcggtggcctggatctcgcactggatgcc 428

>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor
          Length = 546

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 307 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgcc 353
           ||||| || |||||||||||||||||||| ||||||  |||||||||
Sbjct: 411 aggctcatctcgctggggtcggtggcctggatctcgcactggatgcc 365

>gb|AY112267.1| Zea mays CL5157_2 mRNA sequence
          Length = 779

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 303 gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgcc 353
           ||||| ||| || |||||||||||||||||||||| ||| | |||||||||
Sbjct: 421 gtccatgctcatctcgctggggtcggtggcctgcagctccagctggatgcc 471

>gb|AY104025.1| Zea mays PCO095832 mRNA sequence
          Length = 894

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 307 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgcc 353
           ||||| || |||||||||||||||||||| ||||||  |||||||||
Sbjct: 460 aggctcatctcgctggggtcggtggcctggatctcgcactggatgcc 414

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 303     gtccaggctgatttcgctggggtcgg 328
               |||| |||||||||||||||||||||
Sbjct: 4866116 gtcccggctgatttcgctggggtcgg 4866091

>gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, complete sequence
          Length = 180645

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    cagggtcctcttgaacttctc 378
              |||||||||||||||||||||
Sbjct: 138047 cagggtcctcttgaacttctc 138067

>ref|XM_478113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 307 aggctgatttcgctggggtcggtggcctgcatctcg 342
           ||||| || ||||||||||| |||||||| ||||||
Sbjct: 463 aggctcatctcgctggggtctgtggcctgaatctcg 428

>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence
          Length = 200979

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    ctataattgacataataaat 219
              ||||||||||||||||||||
Sbjct: 200019 ctataattgacataataaat 200000

>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence
          Length = 170969

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    ctataattgacataataaat 219
              ||||||||||||||||||||
Sbjct: 127777 ctataattgacataataaat 127796

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 307      aggctgatttcgctggggtcggtggcctgcatctcg 342
                ||||| || ||||||||||| |||||||| ||||||
Sbjct: 17688290 aggctcatctcgctggggtctgtggcctgaatctcg 17688255

>gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177503

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 196    aaatctataattgacataataaat 219
              |||||||||||||||||| |||||
Sbjct: 150960 aaatctataattgacatactaaat 150937

>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_F08
          Length = 134988

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 307   aggctgatttcgctggggtcggtggcctgcatctcg 342
             ||||| || ||||||||||| |||||||| ||||||
Sbjct: 92323 aggctcatctcgctggggtctgtggcctgaatctcg 92288

>dbj|AK072662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134C12, full
           insert sequence
          Length = 884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 307 aggctgatttcgctggggtcggtggcctgcatctcg 342
           ||||| || ||||||||||| |||||||| ||||||
Sbjct: 463 aggctcatctcgctggggtctgtggcctgaatctcg 428

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 196     aaatctataattgacataataaat 219
               |||||||||||||| |||||||||
Sbjct: 2915373 aaatctataattgaaataataaat 2915396

>emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on chromosome X, complete
             sequence
          Length = 160230

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   caaatctataattgacataa 214
             ||||||||||||||||||||
Sbjct: 31926 caaatctataattgacataa 31945

>emb|BX004970.8| Zebrafish DNA sequence from clone DKEY-9I4, complete sequence
          Length = 246777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ttggatggatggttggtttg 273
             ||||||||||||||||||||
Sbjct: 93043 ttggatggatggttggtttg 93024

>gb|U58278.1|TAU58278 Triticum aestivum actin-binding protein WCOR719 (Wcor719) mRNA,
           complete cds
          Length = 648

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 316 tcgctggggtcggtggcctgcatctcgatctg 347
           ||||||| ||||||||||||||  ||||||||
Sbjct: 470 tcgctggcgtcggtggcctgcacgtcgatctg 439

>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence
          Length = 175575

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tggatggatggttggtttgc 274
              ||||||||||||||||||||
Sbjct: 130295 tggatggatggttggtttgc 130314

>gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, complete sequence
          Length = 87978

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ctataattgacataataaat 219
             ||||||||||||||||||||
Sbjct: 26898 ctataattgacataataaat 26917


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,622,373
Number of Sequences: 3902068
Number of extensions: 3622373
Number of successful extensions: 67552
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67392
Number of HSP's gapped (non-prelim): 155
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)