ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18b21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
2dbj|AK072293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
3ref|XM_463585.1| Oryza sativa (japonica cultivar-group), predic... 317 3e-83
4dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
6dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
7dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic D... 131 4e-27
8gb|BT018106.1| Zea mays clone EL01N0553D05.c mRNA sequence 92 3e-15
9gb|DQ284471.1| Solanum tuberosum clone 110F03 RabGAP/TBC domain-... 66 2e-07
10ref|XM_472208.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
11emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4,... 56 2e-04
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
13dbj|AK109611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
14gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete s... 54 7e-04
15gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete s... 54 7e-04
16gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete s... 52 0.003
17ref|NM_117447.3| Arabidopsis thaliana unknown protein AT4G13730 ... 50 0.010
18emb|BX827350.1|CNS0A2SX Arabidopsis thaliana Full-length cDNA Co... 50 0.010
19dbj|AK173529.1| Ciona intestinalis cDNA, clone:ciad033l04, full ... 44 0.64
20ref|NM_202813.1| Arabidopsis thaliana unknown protein AT4G13730 ... 42 2.5
21emb|Z68117.1|CEF45E6 Caenorhabditis elegans Cosmid F45E6, comple... 42 2.5
22gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 42 2.5
23ref|XM_854811.1| PREDICTED: Canis familiaris similar to ring fin... 42 2.5
24gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosom... 42 2.5
25emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, ... 42 2.5
26emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.5
27ref|NM_077694.2| Caenorhabditis elegans F45E6.3 (F45E6.3) mRNA, ... 42 2.5
28emb|BX827047.1|CNS0A3CN Arabidopsis thaliana Full-length cDNA Co... 42 2.5
29gb|AC007971.3| Homo sapiens BAC clone RP11-510C23 from 2, comple... 42 2.5
30gb|BC098941.1| Rattus norvegicus ring finger protein 2, mRNA (cD... 42 2.5
31ref|NM_001025667.1| Rattus norvegicus ring finger protein 2 (Rnf... 42 2.5
32gb|AC114642.6| Mus musculus chromosome 3, clone RP24-127D4, comp... 40 9.9
33gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 9.9
34gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosom... 40 9.9
35gb|AC168049.2| Mus musculus BAC clone RP23-246L6 from chromosome... 40 9.9
36gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.9
37gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosom... 40 9.9
38gb|AC118539.5| Mus musculus strain 129/Sv clone ct7-282g9 map 14... 40 9.9
39emb|Z99496.1|HS509L4 Human DNA sequence from clone RP3-509L4 on ... 40 9.9
40emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on ch... 40 9.9
41emb|AL359757.21| Human DNA sequence from clone RP11-165I9 on chr... 40 9.9
42emb|AL096799.6|HSJ764O22 Human DNA sequence from clone RP4-764O2... 40 9.9
43gb|AC134174.1| Drosophila pseudoobscura FOSMID DPSF1-548A7 (Chi... 40 9.9
44gb|AC162301.3| Mus musculus chromosome 15, clone RP24-282H6, com... 40 9.9
45gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete se... 40 9.9
46gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, comple... 40 9.9
47emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 40 9.9
48dbj|AK053266.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 9.9
49dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
50gb|AC034150.6| Homo sapiens BAC clone RP11-167N19 from 4, comple... 40 9.9
51gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 40 9.9
52gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28... 40 9.9
53dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
54dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
55emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, ... 40 9.9
56emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 ... 40 9.9
57gb|AF048832.1|AF048832 Microtus ochrogaster cytosolic NADP-depen... 40 9.9
58gb|AF048831.1|AF048831 Microtus mexicanus cytosolic NADP-depende... 40 9.9
59gb|AC163702.3| Gallus gallus BAC clone CH261-124A8 from chromoso... 40 9.9
60gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome... 40 9.9
61emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, c... 40 9.9
62emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chr... 40 9.9 
>dbj|AK105143.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-B07, full
           insert sequence
          Length = 858

 Score =  416 bits (210), Expect = e-113
 Identities = 472/560 (84%), Gaps = 7/560 (1%)
 Strand = Plus / Minus

                                                                       
Query: 155 ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
           |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 692 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 633

                                                                       
Query: 215 gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
           |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 632 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 573

                                                                       
Query: 275 gcattgcgcaacatattctcagcaaggtttcctgaggaccatcggggtcacttaacagtg 334
           ||||||| || || ||||| |||||||| |||||||||||||| || |||||||| ||||
Sbjct: 572 gcattgcacagcagattctgagcaaggtctcctgaggaccatcaggatcacttaatagtg 513

                                                                       
Query: 335 tgtcccatatatgaatagtatcggcaaagttgaattcctgggttaacagcagtgttatcc 394
           |||||||||| |||||||| || ||||||||||| |||||||||||||| || || ||||
Sbjct: 512 tgtcccatatgtgaatagtgtcagcaaagttgaactcctgggttaacagtagcgtaatcc 453

                                                                       
Query: 395 acctgaacgcgtagaactggggattaacttctgtagttatttccaagtggtgctgaagtt 454
           ||| ||| ||||||||||| ||||||| |||||| ||||||||||| |   ||||||| |
Sbjct: 452 accggaatgcgtagaactgaggattaatttctgttgttatttccaaataacgctgaagct 393

                                                                       
Query: 455 ctccatcatacttcttcaggagttgcattaatttggacagcgtccctcgaattccgacag 514
           ||||||||||||||   |  ||||||   | ||| || || || ||| |||| || ||||
Sbjct: 392 ctccatcatacttcgcaacaagttgcgacagttttgagagagtaccttgaatgccaacag 333

                                                                       
Query: 515 cactgttgtctagcttctggcagaagttgtctctaagaccactaagtaactccacgaagc 574
           ||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 332 cactgttgtctagtttctggcagaagttgtctctaaacccactaagtaactccatgaagc 273

                                                                       
Query: 575 aaaagaaagaatcggcttcggcaaagtttccatacagaatttttataatctggatcattc 634
           | ||||||||||| ||||| ||||||||       || |||||||| |||||||||||||
Sbjct: 272 agaagaaagaatcagcttctgcaaagtt-------agcatttttatcatctggatcattc 220

                                                                       
Query: 635 cgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacgtatcttatccca 694
           ||||| ||||||||||| || ||||||||||||||||| ||||| || || | ||| || 
Sbjct: 219 cgaaacacaaagaagagaggtgccaaaatttcattcatcccttgtacataacgtattccg 160

                               
Query: 695 gcattcagcttggcaaagat 714
           ||||||||||| ||||||||
Sbjct: 159 gcattcagctttgcaaagat 140
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>dbj|AK072293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017P18, full
            insert sequence
          Length = 1304

 Score =  416 bits (210), Expect = e-113
 Identities = 472/560 (84%), Gaps = 7/560 (1%)
 Strand = Plus / Minus

                                                                        
Query: 155  ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
            |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 1138 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 1079

                                                                        
Query: 215  gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
            |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 1078 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 1019

                                                                        
Query: 275  gcattgcgcaacatattctcagcaaggtttcctgaggaccatcggggtcacttaacagtg 334
            ||||||| || || ||||| |||||||| |||||||||||||| || |||||||| ||||
Sbjct: 1018 gcattgcacagcagattctgagcaaggtctcctgaggaccatcaggatcacttaatagtg 959

                                                                        
Query: 335  tgtcccatatatgaatagtatcggcaaagttgaattcctgggttaacagcagtgttatcc 394
            |||||||||| |||||||| || ||||||||||| |||||||||||||| || || ||||
Sbjct: 958  tgtcccatatgtgaatagtgtcagcaaagttgaactcctgggttaacagtagcgtaatcc 899

                                                                        
Query: 395  acctgaacgcgtagaactggggattaacttctgtagttatttccaagtggtgctgaagtt 454
            ||| ||| ||||||||||| ||||||| |||||| ||||||||||| |   ||||||| |
Sbjct: 898  accggaatgcgtagaactgaggattaatttctgttgttatttccaaataacgctgaagct 839

                                                                        
Query: 455  ctccatcatacttcttcaggagttgcattaatttggacagcgtccctcgaattccgacag 514
            ||||||||||||||   |  ||||||   | ||| || || || ||| |||| || ||||
Sbjct: 838  ctccatcatacttcgcaacaagttgcgacagttttgagagagtaccttgaatgccaacag 779

                                                                        
Query: 515  cactgttgtctagcttctggcagaagttgtctctaagaccactaagtaactccacgaagc 574
            ||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||
Sbjct: 778  cactgttgtctagtttctggcagaagttgtctctaaacccactaagtaactccatgaagc 719

                                                                        
Query: 575  aaaagaaagaatcggcttcggcaaagtttccatacagaatttttataatctggatcattc 634
            | ||||||||||| ||||| ||||||||       || |||||||| |||||||||||||
Sbjct: 718  agaagaaagaatcagcttctgcaaagtt-------agcatttttatcatctggatcattc 666

                                                                        
Query: 635  cgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacgtatcttatccca 694
            ||||| ||||||||||| || ||||||||||||||||| ||||| || || | ||| || 
Sbjct: 665  cgaaacacaaagaagagaggtgccaaaatttcattcatcccttgtacataacgtattccg 606

                                
Query: 695  gcattcagcttggcaaagat 714
            ||||||||||| ||||||||
Sbjct: 605  gcattcagctttgcaaagat 586
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>ref|XM_463585.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score =  317 bits (160), Expect = 3e-83
 Identities = 347/410 (84%), Gaps = 7/410 (1%)
 Strand = Plus / Minus

                                                                       
Query: 305 cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
           ||||||||||||| || |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 943 cctgaggaccatcaggatcacttaatagtgtgtcccatatgtgaatagtgtcagcaaagt 884

                                                                       
Query: 365 tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaactt 424
           |||| |||||||||||||| || || ||||||| ||| ||||||||||| ||||||| ||
Sbjct: 883 tgaactcctgggttaacagtagcgtaatccaccggaatgcgtagaactgaggattaattt 824

                                                                       
Query: 425 ctgtagttatttccaagtggtgctgaagttctccatcatacttcttcaggagttgcatta 484
           |||| ||||||||||| |   ||||||| |||||||||||||||   |  ||||||   |
Sbjct: 823 ctgttgttatttccaaataacgctgaagctctccatcatacttcgcaacaagttgcgaca 764

                                                                       
Query: 485 atttggacagcgtccctcgaattccgacagcactgttgtctagcttctggcagaagttgt 544
            ||| || || || ||| |||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 763 gttttgagagagtaccttgaatgccaacagcactgttgtctagtttctggcagaagttgt 704

                                                                       
Query: 545 ctctaagaccactaagtaactccacgaagcaaaagaaagaatcggcttcggcaaagtttc 604
           ||||||  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||  
Sbjct: 703 ctctaaacccactaagtaactccatgaagcagaagaaagaatcagcttctgcaaagtt-- 646

                                                                       
Query: 605 catacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaatt 664
                || |||||||| |||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 645 -----agcatttttatcatctggatcattccgaaacacaaagaagagaggtgccaaaatt 591

                                                             
Query: 665 tcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
           |||||||| ||||| || || | ||| || ||||||||||| ||||||||
Sbjct: 590 tcattcatcccttgtacataacgtattccggcattcagctttgcaaagat 541
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>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0497A05
          Length = 130919

 Score =  131 bits (66), Expect = 4e-27
 Identities = 153/182 (84%)
 Strand = Plus / Plus

                                                                         
Query: 421   acttctgtagttatttccaagtggtgctgaagttctccatcatacttcttcaggagttgc 480
             |||||||| ||||||||||| |   ||||||| |||||||||||||||   |  ||||||
Sbjct: 86615 acttctgttgttatttccaaataacgctgaagctctccatcatacttcgcaacaagttgc 86674

                                                                         
Query: 481   attaatttggacagcgtccctcgaattccgacagcactgttgtctagcttctggcagaag 540
                | ||| || || || ||| |||| || ||||||||||||||||| ||||||||||||
Sbjct: 86675 gacagttttgagagagtaccttgaatgccaacagcactgttgtctagtttctggcagaag 86734

                                                                         
Query: 541   ttgtctctaagaccactaagtaactccacgaagcaaaagaaagaatcggcttcggcaaag 600
             ||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| ||||||
Sbjct: 86735 ttgtctctaaacccactaagtaactccatgaagcagaagaaagaatcagcttctgcaaag 86794

               
Query: 601   tt 602
             ||
Sbjct: 86795 tt 86796



 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                         
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
             ||||||||||||| || |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 86250 cctgaggaccatcaggatcacttaatagtgtgtcccatatgtgaatagtgtcagcaaagt 86309

                                                                      
Query: 365   tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaa 421
             |||| |||||||||||||| || || ||||||| ||| ||||||||||| |||||||
Sbjct: 86310 tgaactcctgggttaacagtagcgtaatccaccggaatgcgtagaactgaggattaa 86366



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                         
Query: 603   tccatacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaa 662
             ||||||||| |||||||| |||||||||||||||||| ||||||||||| || |||||||
Sbjct: 86938 tccatacagcatttttatcatctggatcattccgaaacacaaagaagagaggtgccaaaa 86997

                                                                 
Query: 663   tttcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
             |||||||||| ||||| || || | ||| || ||||||||||| ||||||||
Sbjct: 86998 tttcattcatcccttgtacataacgtattccggcattcagctttgcaaagat 87049



 Score =  107 bits (54), Expect = 5e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                         
Query: 155   ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
             |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 86018 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 86077

                                                                         
Query: 215   gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
             |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 86078 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 86137

                                               
Query: 275   gcattgcgcaacatattctcagcaaggtttcctg 308
             ||||||| || || ||||| |||||||| |||||
Sbjct: 86138 gcattgcacagcagattctgagcaaggtctcctg 86171
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 4e-27
 Identities = 153/182 (84%)
 Strand = Plus / Plus

                                                                            
Query: 421      acttctgtagttatttccaagtggtgctgaagttctccatcatacttcttcaggagttgc 480
                |||||||| ||||||||||| |   ||||||| |||||||||||||||   |  ||||||
Sbjct: 39532173 acttctgttgttatttccaaataacgctgaagctctccatcatacttcgcaacaagttgc 39532232

                                                                            
Query: 481      attaatttggacagcgtccctcgaattccgacagcactgttgtctagcttctggcagaag 540
                   | ||| || || || ||| |||| || ||||||||||||||||| ||||||||||||
Sbjct: 39532233 gacagttttgagagagtaccttgaatgccaacagcactgttgtctagtttctggcagaag 39532292

                                                                            
Query: 541      ttgtctctaagaccactaagtaactccacgaagcaaaagaaagaatcggcttcggcaaag 600
                ||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| ||||||
Sbjct: 39532293 ttgtctctaaacccactaagtaactccatgaagcagaagaaagaatcagcttctgcaaag 39532352

                  
Query: 601      tt 602
                ||
Sbjct: 39532353 tt 39532354



 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 305      cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
                ||||||||||||| || |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 39531808 cctgaggaccatcaggatcacttaatagtgtgtcccatatgtgaatagtgtcagcaaagt 39531867

                                                                         
Query: 365      tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaa 421
                |||| |||||||||||||| || || ||||||| ||| ||||||||||| |||||||
Sbjct: 39531868 tgaactcctgggttaacagtagcgtaatccaccggaatgcgtagaactgaggattaa 39531924



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                            
Query: 603      tccatacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaa 662
                ||||||||| |||||||| |||||||||||||||||| ||||||||||| || |||||||
Sbjct: 39532496 tccatacagcatttttatcatctggatcattccgaaacacaaagaagagaggtgccaaaa 39532555

                                                                    
Query: 663      tttcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
                |||||||||| ||||| || || | ||| || ||||||||||| ||||||||
Sbjct: 39532556 tttcattcatcccttgtacataacgtattccggcattcagctttgcaaagat 39532607



 Score =  107 bits (54), Expect = 5e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                            
Query: 155      ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
                |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 39531576 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 39531635

                                                                            
Query: 215      gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
                |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 39531636 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 39531695

                                                  
Query: 275      gcattgcgcaacatattctcagcaaggtttcctg 308
                ||||||| || || ||||| |||||||| |||||
Sbjct: 39531696 gcattgcacagcagattctgagcaaggtctcctg 39531729
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>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score =  131 bits (66), Expect = 4e-27
 Identities = 153/182 (84%)
 Strand = Plus / Plus

                                                                         
Query: 421   acttctgtagttatttccaagtggtgctgaagttctccatcatacttcttcaggagttgc 480
             |||||||| ||||||||||| |   ||||||| |||||||||||||||   |  ||||||
Sbjct: 13129 acttctgttgttatttccaaataacgctgaagctctccatcatacttcgcaacaagttgc 13188

                                                                         
Query: 481   attaatttggacagcgtccctcgaattccgacagcactgttgtctagcttctggcagaag 540
                | ||| || || || ||| |||| || ||||||||||||||||| ||||||||||||
Sbjct: 13189 gacagttttgagagagtaccttgaatgccaacagcactgttgtctagtttctggcagaag 13248

                                                                         
Query: 541   ttgtctctaagaccactaagtaactccacgaagcaaaagaaagaatcggcttcggcaaag 600
             ||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| ||||||
Sbjct: 13249 ttgtctctaaacccactaagtaactccatgaagcagaagaaagaatcagcttctgcaaag 13308

               
Query: 601   tt 602
             ||
Sbjct: 13309 tt 13310



 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                         
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
             ||||||||||||| || |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 12764 cctgaggaccatcaggatcacttaatagtgtgtcccatatgtgaatagtgtcagcaaagt 12823

                                                                      
Query: 365   tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaa 421
             |||| |||||||||||||| || || ||||||| ||| ||||||||||| |||||||
Sbjct: 12824 tgaactcctgggttaacagtagcgtaatccaccggaatgcgtagaactgaggattaa 12880



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                         
Query: 603   tccatacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaa 662
             ||||||||| |||||||| |||||||||||||||||| ||||||||||| || |||||||
Sbjct: 13452 tccatacagcatttttatcatctggatcattccgaaacacaaagaagagaggtgccaaaa 13511

                                                                 
Query: 663   tttcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
             |||||||||| ||||| || || | ||| || ||||||||||| ||||||||
Sbjct: 13512 tttcattcatcccttgtacataacgtattccggcattcagctttgcaaagat 13563



 Score =  107 bits (54), Expect = 5e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                         
Query: 155   ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
             |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 12532 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 12591

                                                                         
Query: 215   gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
             |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 12592 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 12651

                                               
Query: 275   gcattgcgcaacatattctcagcaaggtttcctg 308
             ||||||| || || ||||| |||||||| |||||
Sbjct: 12652 gcattgcacagcagattctgagcaaggtctcctg 12685
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>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1417F08
          Length = 155536

 Score =  131 bits (66), Expect = 4e-27
 Identities = 153/182 (84%)
 Strand = Plus / Plus

                                                                          
Query: 421    acttctgtagttatttccaagtggtgctgaagttctccatcatacttcttcaggagttgc 480
              |||||||| ||||||||||| |   ||||||| |||||||||||||||   |  ||||||
Sbjct: 107187 acttctgttgttatttccaaataacgctgaagctctccatcatacttcgcaacaagttgc 107246

                                                                          
Query: 481    attaatttggacagcgtccctcgaattccgacagcactgttgtctagcttctggcagaag 540
                 | ||| || || || ||| |||| || ||||||||||||||||| ||||||||||||
Sbjct: 107247 gacagttttgagagagtaccttgaatgccaacagcactgttgtctagtttctggcagaag 107306

                                                                          
Query: 541    ttgtctctaagaccactaagtaactccacgaagcaaaagaaagaatcggcttcggcaaag 600
              ||||||||||  |||||||||||||||| |||||| ||||||||||| ||||| ||||||
Sbjct: 107307 ttgtctctaaacccactaagtaactccatgaagcagaagaaagaatcagcttctgcaaag 107366

                
Query: 601    tt 602
              ||
Sbjct: 107367 tt 107368



 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                          
Query: 305    cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
              ||||||||||||| || |||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 106822 cctgaggaccatcaggatcacttaatagtgtgtcccatatgtgaatagtgtcagcaaagt 106881

                                                                       
Query: 365    tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaa 421
              |||| |||||||||||||| || || ||||||| ||| ||||||||||| |||||||
Sbjct: 106882 tgaactcctgggttaacagtagcgtaatccaccggaatgcgtagaactgaggattaa 106938



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                          
Query: 603    tccatacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaa 662
              ||||||||| |||||||| |||||||||||||||||| ||||||||||| || |||||||
Sbjct: 107510 tccatacagcatttttatcatctggatcattccgaaacacaaagaagagaggtgccaaaa 107569

                                                                  
Query: 663    tttcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
              |||||||||| ||||| || || | ||| || ||||||||||| ||||||||
Sbjct: 107570 tttcattcatcccttgtacataacgtattccggcattcagctttgcaaagat 107621



 Score =  107 bits (54), Expect = 5e-20
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                          
Query: 155    ttcactgcagcttgtttgcaacgtagaggaggtggccgatgttcgtcggagggtagctct 214
              |||| |||||||||||||| ||||| |||||||||| |||||| || || |||||| |||
Sbjct: 106590 ttcagtgcagcttgtttgcgacgtaaaggaggtggctgatgtttgttggggggtagttct 106649

                                                                          
Query: 215    gcagaagcttgaggttggaggtgaaatcgccggcaaggagccgtttccggacgaggatca 274
              |||| |||||||| ||||| |||||||| || || |  || ||||| ||||| || ||||
Sbjct: 106650 gcaggagcttgagattggaagtgaaatcaccagccaataggcgttttcggacaagaatca 106709

                                                
Query: 275    gcattgcgcaacatattctcagcaaggtttcctg 308
              ||||||| || || ||||| |||||||| |||||
Sbjct: 106710 gcattgcacagcagattctgagcaaggtctcctg 106743
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>gb|BT018106.1| Zea mays clone EL01N0553D05.c mRNA sequence
          Length = 1626

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 97/112 (86%), Gaps = 4/112 (3%)
 Strand = Plus / Minus

                                                                       
Query: 603 tccatacagaatttttataatctggatcattccgaaatacaaagaagagtggcgccaaaa 662
           ||||||||| |||||||| ||| |||||| |||||||||||   ||||| || |||| ||
Sbjct: 795 tccatacagcatttttatcatccggatcactccgaaataca---aagagcggtgccagaa 739

                                                               
Query: 663 tttcattcattccttgcacgtatcttatcccagcattcagcttggcaaagat 714
           ||||||||| |||||| || |||| ||| |||||||||||||||||||||||
Sbjct: 738 tttcattca-tccttgtacatatcctattccagcattcagcttggcaaagat 688



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                        
Query: 500  ctcgaattccgacagcactgttgtctagcttctggcagaagttgtctctaagaccactaa 559
            |||||| ||| ||||||||||||||||| ||||||||||||||||||||||  |||||||
Sbjct: 1022 ctcgaactccaacagcactgttgtctagtttctggcagaagttgtctctaaacccactaa 963



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                        
Query: 177  gtagaggaggtggccgatgttcgtcggagggtagctctgcagaagcttgaggttggaggt 236
            ||||||| |||||| ||||||||| ||  ||||  ||||||| |||| |||| |||||||
Sbjct: 1354 gtagaggtggtggctgatgttcgttggcaggtaattctgcaggagctcgaggatggaggt 1295

                                                      
Query: 237  gaaatcgccggcaaggagccgtttccggacgaggatcagcat 278
            ||||||||||||   ||| || |||||||| |||| ||||||
Sbjct: 1294 gaaatcgccggcccagaggcgcttccggacaaggaacagcat 1253



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 390  tatccacctgaacgcgtagaactggggattaac 422
            |||||| |||||||| |||||||||||||||||
Sbjct: 1150 tatccatctgaacgcatagaactggggattaac 1118
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>gb|DQ284471.1| Solanum tuberosum clone 110F03 RabGAP/TBC domain-containing
            protein-like mRNA, complete cds
          Length = 1830

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 90/109 (82%)
 Strand = Plus / Minus

                                                                        
Query: 316  tcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagttgaattcctgg 375
            ||||| |||||||  ||||||||||||||| | | | | || |  ||||||||||| || 
Sbjct: 1476 tcgggatcacttagtagtgtgtcccatataagcagactgtccgggaagttgaattcttgt 1417

                                                             
Query: 376  gttaacagcagtgttatccacctgaacgcgtagaactggggattaactt 424
            |||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||
Sbjct: 1416 gttagcagaagtgttatccatctgaatgcgtagaactgtggattcactt 1368
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>ref|XM_472208.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1179

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 623 tctggatcattccgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacg 682
           ||||||||||||   || ||| || ||||||| ||||||| ||||||||||||||| || 
Sbjct: 665 tctggatcattcttgaaaacatagtagagtggtgccaaaacttcattcattccttgtaca 606

                   
Query: 683 tatcttat 690
           ||||||||
Sbjct: 605 tatcttat 598



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 186/240 (77%)
 Strand = Plus / Minus

                                                                        
Query: 183  gaggtggccgatgttcgtcggagggtagctctgcagaagcttgaggttggaggtgaaatc 242
            ||||||| | ||||| || || || |||||||| |||||||| ||||| |  ||||||||
Sbjct: 1137 gaggtggtcaatgtttgtgggtggatagctctggagaagctttaggtttgctgtgaaatc 1078

                                                                        
Query: 243  gccggcaaggagccgtttccggacgaggatcagcattgcgcaacatattctcagcaaggt 302
             ||||| | ||||||  | || || || || ||||| || ||||| ||||  || |||||
Sbjct: 1077 cccggccaagagccgccttcgaacaagaattagcatagcacaacagattcgaagtaaggt 1018

                                                                        
Query: 303  ttcctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaa 362
              ||||||| || || || |||| ||||||||  ||||||||||| ||    |||  |||
Sbjct: 1017 ggcctgaggtccctcaggatcacctaacagtgcatcccatatatggatgcagtcgcgaaa 958

                                                                        
Query: 363  gttgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaac 422
             ||||||||||| || || ||||  || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 957  cttgaattcctgcgtcaatagcaaggtgatccatctgaatgcgtaaaactgtggattaac 898
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>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01,
             complete sequence
          Length = 148353

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 623   tctggatcattccgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacg 682
             ||||||||||||   || ||| || ||||||| ||||||| ||||||||||||||| || 
Sbjct: 46911 tctggatcattcttgaaaacatagtagagtggtgccaaaacttcattcattccttgtaca 46852

                     
Query: 683   tatcttat 690
             ||||||||
Sbjct: 46851 tatcttat 46844
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                            
Query: 623      tctggatcattccgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacg 682
                ||||||||||||   || ||| || ||||||| ||||||| ||||||||||||||| || 
Sbjct: 18465558 tctggatcattcttgaaaacatagtagagtggtgccaaaacttcattcattccttgtaca 18465499

                        
Query: 683      tatcttat 690
                ||||||||
Sbjct: 18465498 tatcttat 18465491
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>dbj|AK109611.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G05, full
           insert sequence
          Length = 1562

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 623 tctggatcattccgaaatacaaagaagagtggcgccaaaatttcattcattccttgcacg 682
           ||||||||||||   || ||| || ||||||| ||||||| ||||||||||||||| || 
Sbjct: 960 tctggatcattcttgaaaacatagtagagtggtgccaaaacttcattcattccttgtaca 901

                   
Query: 683 tatcttat 690
           ||||||||
Sbjct: 900 tatcttat 893



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 186/240 (77%)
 Strand = Plus / Minus

                                                                        
Query: 183  gaggtggccgatgttcgtcggagggtagctctgcagaagcttgaggttggaggtgaaatc 242
            ||||||| | ||||| || || || |||||||| |||||||| ||||| |  ||||||||
Sbjct: 1393 gaggtggtcaatgtttgtgggtggatagctctggagaagctttaggtttgctgtgaaatc 1334

                                                                        
Query: 243  gccggcaaggagccgtttccggacgaggatcagcattgcgcaacatattctcagcaaggt 302
             ||||| | ||||||  | || || || || ||||| || ||||| ||||  || |||||
Sbjct: 1333 cccggccaagagccgccttcgaacaagaattagcatagcacaacagattcgaagtaaggt 1274

                                                                        
Query: 303  ttcctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaa 362
              ||||||| || || || |||| ||||||||  ||||||||||| ||    |||  |||
Sbjct: 1273 ggcctgaggtccctcaggatcacctaacagtgcatcccatatatggatgcagtcgcgaaa 1214

                                                                        
Query: 363  gttgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggattaac 422
             ||||||||||| || || ||||  || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 1213 cttgaattcctgcgtcaatagcaaggtgatccatctgaatgcgtaaaactgtggattaac 1154
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>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence
          Length = 119096

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 93/115 (80%)
 Strand = Plus / Plus

                                                                         
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
             |||| ||||| || ||||||| ||| || |||||||| ||||||| | | || ||||| |
Sbjct: 68075 cctgtggaccctctgggtcacctaaaagagtgtcccaaatatgaagactgtcagcaaaat 68134

                                                                    
Query: 365   tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggatt 419
             |||||||||| || || || || || |||||||| || || ||||| ||||||||
Sbjct: 68135 tgaattcctgagtcaataggagagtgatccacctaaatgcatagaattggggatt 68189
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>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence
          Length = 92189

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 93/115 (80%)
 Strand = Plus / Plus

                                                                        
Query: 305  cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
            |||| ||||| || ||||||| ||| || |||||||| ||||||| | | || ||||| |
Sbjct: 6800 cctgtggaccctctgggtcacctaaaagagtgtcccaaatatgaagactgtcagcaaaat 6859

                                                                   
Query: 365  tgaattcctgggttaacagcagtgttatccacctgaacgcgtagaactggggatt 419
            |||||||||| || || || || || |||||||| || || ||||| ||||||||
Sbjct: 6860 tgaattcctgagtcaataggagagtgatccacctaaatgcatagaattggggatt 6914
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>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence
          Length = 99811

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtcccatatatgaatagtatcggcaaagt 364
             |||||||||| || ||||||||||  ||||||||||| || |||||| |||| || || |
Sbjct: 98386 cctgaggaccctcagggtcacttagaagtgtgtcccaaatgtgaatactatctgcgaaat 98327

                       
Query: 365   tgaattcctg 374
             |||| |||||
Sbjct: 98326 tgaactcctg 98317



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 260   tccggacgaggatcagcattgcgcaacatattctcagcaaggtttcctg 308
             |||| ||||| ||||||||||| |||||||  || ||||| ||||||||
Sbjct: 99082 tccgaacgagaatcagcattgcacaacataccctaagcaaagtttcctg 99034
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>ref|NM_117447.3| Arabidopsis thaliana unknown protein AT4G13730 transcript variant
            AT4G13730.1 mRNA, complete cds
          Length = 1551

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 301  gtttcctgaggaccatcggggtcacttaacagtgtgtccca 341
            |||||||||||||| || ||||| ||||| |||||||||||
Sbjct: 1207 gtttcctgaggaccttccgggtcgcttaagagtgtgtccca 1167
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>emb|BX827350.1|CNS0A2SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS43ZC05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 301  gtttcctgaggaccatcggggtcacttaacagtgtgtccca 341
            |||||||||||||| || ||||| ||||| |||||||||||
Sbjct: 1218 gtttcctgaggaccttccgggtcgcttaagagtgtgtccca 1178
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>dbj|AK173529.1| Ciona intestinalis cDNA, clone:ciad033l04, full insert sequence
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 336  gtcccatatatgaatagtatcggcaaagttgaattcctgggttaacagcagtgttatcca 395
            |||||||||||||||   |||||  | ||||||||| |||| |||||| || |||| |||
Sbjct: 1072 gtcccatatatgaattacatcggggaggttgaattcttgggataacagtagagttaacca 1013

                  
Query: 396  cctgaa 401
            ||||||
Sbjct: 1012 cctgaa 1007
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>ref|NM_202813.1| Arabidopsis thaliana unknown protein AT4G13730 transcript variant
            AT4G13730.2 mRNA, complete cds
          Length = 1594

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 305  cctgaggaccatcggggtcacttaacagtgtgtccca 341
            |||||||||| || ||||| ||||| |||||||||||
Sbjct: 1215 cctgaggaccttccgggtcgcttaagagtgtgtccca 1179
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>emb|Z68117.1|CEF45E6 Caenorhabditis elegans Cosmid F45E6, complete sequence
          Length = 34043

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 665   tcattcattccttgcacgtat 685
             |||||||||||||||||||||
Sbjct: 18279 tcattcattccttgcacgtat 18259
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>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 541   ttgtctctaagaccactaagt 561
             |||||||||||||||||||||
Sbjct: 28026 ttgtctctaagaccactaagt 28046
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>ref|XM_854811.1| PREDICTED: Canis familiaris similar to ring finger protein 2,
            transcript variant 4 (LOC480042), mRNA
          Length = 1765

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   ttacagatttcactgaagaaa 111
            |||||||||||||||||||||
Sbjct: 1731 ttacagatttcactgaagaaa 1751
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>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete sequence
          Length = 184836

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 541    ttgtctctaagaccactaagt 561
              |||||||||||||||||||||
Sbjct: 154918 ttgtctctaagaccactaagt 154938
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>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37
          Length = 199667

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtccca 341
             |||||||||| || ||||| ||||| |||||||||||
Sbjct: 65722 cctgaggaccttccgggtcgcttaagagtgtgtccca 65686
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>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project)
          Length = 118718

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 305   cctgaggaccatcggggtcacttaacagtgtgtccca 341
             |||||||||| || ||||| ||||| |||||||||||
Sbjct: 44630 cctgaggaccttccgggtcgcttaagagtgtgtccca 44594
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>ref|NM_077694.2| Caenorhabditis elegans F45E6.3 (F45E6.3) mRNA, complete cds
          Length = 1745

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 665 tcattcattccttgcacgtat 685
           |||||||||||||||||||||
Sbjct: 770 tcattcattccttgcacgtat 750
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>emb|BX827047.1|CNS0A3CN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB8ZE12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1521

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 305  cctgaggaccatcggggtcacttaacagtgtgtccca 341
            |||||||||| || ||||| ||||| |||||||||||
Sbjct: 1216 cctgaggaccttccgggtcgcttaagagtgtgtccca 1180
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>gb|AC007971.3| Homo sapiens BAC clone RP11-510C23 from 2, complete sequence
          Length = 146705

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 470  tcaggagttgcattaatttgg 490
            |||||||||||||||||||||
Sbjct: 2749 tcaggagttgcattaatttgg 2729
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>gb|BC098941.1| Rattus norvegicus ring finger protein 2, mRNA (cDNA clone MGC:114502
            IMAGE:7456372), complete cds
          Length = 2418

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   ttacagatttcactgaagaaa 111
            |||||||||||||||||||||
Sbjct: 2235 ttacagatttcactgaagaaa 2255
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>ref|NM_001025667.1| Rattus norvegicus ring finger protein 2 (Rnf2), mRNA
          Length = 2418

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   ttacagatttcactgaagaaa 111
            |||||||||||||||||||||
Sbjct: 2235 ttacagatttcactgaagaaa 2255
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>gb|AC114642.6| Mus musculus chromosome 3, clone RP24-127D4, complete sequence
          Length = 189320

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    tccacgaagcaaaagaaaga 584
              ||||||||||||||||||||
Sbjct: 117392 tccacgaagcaaaagaaaga 117373
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    gaggttggaggtgaaatcgc 244
              ||||||||||||||||||||
Sbjct: 490065 gaggttggaggtgaaatcgc 490084
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>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete
             sequence
          Length = 156644

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   gcagaagttgtctctaagac 553
             ||||||||||||||||||||
Sbjct: 18624 gcagaagttgtctctaagac 18643
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>gb|AC168049.2| Mus musculus BAC clone RP23-246L6 from chromosome 10, complete sequence
          Length = 229657

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     agatttcactgaagaaatat 114
              ||||||||||||||||||||
Sbjct: 182614 agatttcactgaagaaatat 182595
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     cgtttccggacgaggatcag 275
               ||||||||||||||||||||
Sbjct: 5065052 cgtttccggacgaggatcag 5065071
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>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence
          Length = 240536

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    gtagaactggggattaactt 424
              ||||||||||||||||||||
Sbjct: 122193 gtagaactggggattaactt 122174
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>gb|AC118539.5| Mus musculus strain 129/Sv clone ct7-282g9 map 14, complete sequence
          Length = 98063

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   gcagaagttgtctctaagac 553
             ||||||||||||||||||||
Sbjct: 75988 gcagaagttgtctctaagac 76007
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>emb|Z99496.1|HS509L4 Human DNA sequence from clone RP3-509L4 on chromosome 6q22.1-22.33
              Contains part of the gene for serologically defined breast
              cancer antigen NY-BR-15 (LOC221312), the PLN gene for
              phospholamban (PLB), a bromodomain-containing 7 (BRD7)
              pseudogene and a synovial sarcoma X breakpoint gene
              pseudogene, complete sequence
          Length = 150290

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    aaggtttcctgaggaccatc 317
              ||||||||||||||||||||
Sbjct: 123483 aaggtttcctgaggaccatc 123464
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>emb|AL513304.27| Human DNA sequence from clone RP11-398B16 on chromosome 10 Contains part
              of the gene for double-stranded RNA specific adenosine
              deaminase (ADAR3), a novel gene and two CpG islands,
              complete sequence
          Length = 163243

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gcttgaggttggaggtgaaa 240
              ||||||||||||||||||||
Sbjct: 109183 gcttgaggttggaggtgaaa 109164
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>emb|AL359757.21| Human DNA sequence from clone RP11-165I9 on chromosome 13q12.11-12.3
             Contains the PABPC3 gene for poly(A) binding protein,
             cytoplasmic 3, the gene for a novel protein (FLJ30487), a
             pseudogene similar to part of 60S ribosomal protein L23a
             (RPL23A), 4 novel genes and 4 CpG islands, complete
             sequence
          Length = 187066

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 564   ctccacgaagcaaaagaaag 583
             ||||||||||||||||||||
Sbjct: 14805 ctccacgaagcaaaagaaag 14786
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>emb|AL096799.6|HSJ764O22 Human DNA sequence from clone RP4-764O22 on chromosome 20 Contains the
             parts of two novel genes, complete sequence
          Length = 82812

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    tttcactgaagaaatatatt 117
             ||||||||||||||||||||
Sbjct: 70796 tttcactgaagaaatatatt 70815
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>gb|AC134174.1| Drosophila pseudoobscura  FOSMID DPSF1-548A7 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 41626

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 595   gcaaagtttccatacagaattttt 618
             |||||||||||||| |||||||||
Sbjct: 34588 gcaaagtttccataaagaattttt 34611
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>gb|AC162301.3| Mus musculus chromosome 15, clone RP24-282H6, complete sequence
          Length = 171176

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    tctccatcatacttcttcag 473
              ||||||||||||||||||||
Sbjct: 105721 tctccatcatacttcttcag 105740
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>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence
          Length = 134892

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    ctgcagaagcttgaggttgg 232
              ||||||||||||||||||||
Sbjct: 124940 ctgcagaagcttgaggttgg 124921
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>gb|AC099794.2| Homo sapiens chromosome 1 clone RP4-771M4, complete sequence
          Length = 134341

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ttcactgaagaaatatattg 118
             ||||||||||||||||||||
Sbjct: 85457 ttcactgaagaaatatattg 85438
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
             complete sequence
          Length = 201353

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 606   atacagaatttttataatct 625
             ||||||||||||||||||||
Sbjct: 95023 atacagaatttttataatct 95042
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>dbj|AK053266.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130003E23 product:inferred: RIKEN cDNA
            4932432K03 gene, full insert sequence
          Length = 3455

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  gcagaagttgtctctaagac 553
            ||||||||||||||||||||
Sbjct: 2085 gcagaagttgtctctaagac 2104
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     cgtagaggaggtggccgatg 195
               ||||||||||||||||||||
Sbjct: 2880922 cgtagaggaggtggccgatg 2880941
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>gb|AC034150.6| Homo sapiens BAC clone RP11-167N19 from 4, complete sequence
          Length = 150167

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 415    ggattaacttctgtagttatttcc 438
              ||||||||||||||| ||||||||
Sbjct: 141517 ggattaacttctgtatttatttcc 141494
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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 662   atttcattcattccttgcacgtat 685
             |||||||||||||| |||||||||
Sbjct: 50117 atttcattcattccatgcacgtat 50094



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 662   atttcattcattccttgcacgtat 685
             |||||||||||||| |||||||||
Sbjct: 15020 atttcattcattccatgcacgtat 15043
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>gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 245179

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 662    atttcattcattccttgcacgtat 685
              |||||||||||||| |||||||||
Sbjct: 224361 atttcattcattccatgcacgtat 224338



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 662    atttcattcattccttgcacgtat 685
              |||||||||||||| |||||||||
Sbjct: 189264 atttcattcattccatgcacgtat 189287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 662    atttcattcattccttgcacgtat 685
              |||||||||||||| |||||||||
Sbjct: 170038 atttcattcattccatgcacgtat 170061
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>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    cgtagaggaggtggccgatg 195
              ||||||||||||||||||||
Sbjct: 124403 cgtagaggaggtggccgatg 124422
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>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   cgtagaggaggtggccgatg 195
             ||||||||||||||||||||
Sbjct: 41068 cgtagaggaggtggccgatg 41087
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>emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, complete sequence
          Length = 170274

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    ttacagatttcactgaagaaatat 114
             |||||||||||||| |||||||||
Sbjct: 59099 ttacagatttcacttaagaaatat 59122
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>emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 in linkage group 16,
              complete sequence
          Length = 169830

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    atacagaatttttataatct 625
              ||||||||||||||||||||
Sbjct: 169426 atacagaatttttataatct 169445
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>gb|AF048832.1|AF048832 Microtus ochrogaster cytosolic NADP-dependent isocitrate
           dehydrogenase (IDP2) gene, complete cds
          Length = 1258

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 tccatcatacttcttcagga 475
           ||||||||||||||||||||
Sbjct: 672 tccatcatacttcttcagga 653
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>gb|AF048831.1|AF048831 Microtus mexicanus cytosolic NADP-dependent isocitrate
           dehydrogenase (IDP2) mRNA, complete cds
          Length = 1261

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 tccatcatacttcttcagga 475
           ||||||||||||||||||||
Sbjct: 679 tccatcatacttcttcagga 660
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>gb|AC163702.3| Gallus gallus BAC clone CH261-124A8 from chromosome ul, complete
             sequence
          Length = 179537

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   aacagatgagcattcactgc 162
             ||||||||||||||||||||
Sbjct: 81733 aacagatgagcattcactgc 81714
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>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    agatttcactgaagaaatat 114
             ||||||||||||||||||||
Sbjct: 95291 agatttcactgaagaaatat 95272
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>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence
          Length = 186487

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    ttacagatttcactgaagaaatat 114
             |||||||||||||| |||||||||
Sbjct: 15411 ttacagatttcacttaagaaatat 15434
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>emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chromosome 14, complete
             sequence
          Length = 139312

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   gcagaagttgtctctaagac 553
             ||||||||||||||||||||
Sbjct: 64065 gcagaagttgtctctaagac 64046


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,331,294
Number of Sequences: 3902068
Number of extensions: 7331294
Number of successful extensions: 138065
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 137718
Number of HSP's gapped (non-prelim): 346
length of query: 726
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 703
effective length of database: 17,143,297,704
effective search space: 12051738285912
effective search space used: 12051738285912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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