Clone Name | rbasd17m15 |
---|---|
Clone Library Name | barley_pub |
>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence Length = 180483 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 ccaccatgattgaaaggatgt 123 ||||||||||||||||||||| Sbjct: 157872 ccaccatgattgaaaggatgt 157852
>gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, complete sequence Length = 165675 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 ccaccatgattgaaaggatgt 123 ||||||||||||||||||||| Sbjct: 32358 ccaccatgattgaaaggatgt 32338
>gb|AC008965.6| Homo sapiens chromosome 5 clone CTD-2364L17, complete sequence Length = 139939 Score = 42.1 bits (21), Expect = 0.42 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ccaccatgattgaaaggatgt 123 ||||||||||||||||||||| Sbjct: 37593 ccaccatgattgaaaggatgt 37613
>gb|AC144517.7| Medicago truncatula clone mth2-13k17, complete sequence Length = 107710 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gcaaggagtgcaagaccatt 78 |||||||||||||||||||| Sbjct: 77144 gcaaggagtgcaagaccatt 77163
>gb|AC154520.3| Mus musculus BAC clone RP23-471P16 from chromosome 14, complete sequence Length = 199186 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 attcagggctcattctttc 39 ||||||||||||||||||| Sbjct: 135035 attcagggctcattctttc 135053
>gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete sequence Length = 184278 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 acaatagccaccatgattg 114 ||||||||||||||||||| Sbjct: 98636 acaatagccaccatgattg 98618
>ref|NM_144019.1| Drosophila melanogaster CG18672-RA (CG18672), mRNA Length = 708 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 acaatagccaccatgattg 114 ||||||||||||||||||| Sbjct: 359 acaatagccaccatgattg 341
>gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 115 of 118 of the complete sequence Length = 232290 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 acaatagccaccatgattg 114 ||||||||||||||||||| Sbjct: 128861 acaatagccaccatgattg 128843
>gb|AC123709.9| Mus musculus chromosome 13, clone RP23-375O18, complete sequence Length = 99670 Score = 38.2 bits (19), Expect = 6.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 gattcagggctcattcttt 38 ||||||||||||||||||| Sbjct: 66438 gattcagggctcattcttt 66456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 678,683 Number of Sequences: 3902068 Number of extensions: 678683 Number of successful extensions: 39538 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39528 Number of HSP's gapped (non-prelim): 10 length of query: 137 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 116 effective length of database: 17,151,101,840 effective search space: 1989527813440 effective search space used: 1989527813440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)