Clone Name | rbasd18b12 |
---|---|
Clone Library Name | barley_pub |
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 329 bits (166), Expect = 2e-87 Identities = 176/181 (97%) Strand = Plus / Minus Query: 1 aacaggtccgtantggaaacancgacacaaccagacatgctccaacctttggtgagaaca 60 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 631 aacaggtccgtaatggaaacaacgacacaaccagacatgctccaacctttggtgagaaca 572 Query: 61 ccgacancacaagacctgtgaaccctgagacagaagcaacgtcatgaccnggcacttact 120 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 571 ccgacaacacaagacctgtgaaccctgagacagaagcaacgtcatgaccaggcacttact 512 Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 511 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagtctg 452 Query: 181 c 181 | Sbjct: 451 c 451 Score = 85.7 bits (43), Expect = 4e-14 Identities = 52/55 (94%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 55 tgccaccacgaaggcggagcaccaggtgaagggtggactccttctggatgttgta 1 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||||||||||||||| Sbjct: 266 agcaccaggtggagagtggactccttctggatgtt 232
>emb|X55717.1|PIUBIQ P. infestans polyubiquitin gene coding for ubiquitin Length = 1632 Score = 103 bits (52), Expect = 2e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 986 tgccaccacgcaggcgaagcaccaggtgaagcgtagactccttctggatgttgtag 931 Score = 87.7 bits (44), Expect = 1e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 1214 tgccaccacgcaggcgaagcaccagatgaagcgttgactccttctggatgttgtag 1159 Score = 85.7 bits (43), Expect = 4e-14 Identities = 49/51 (96%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1437 ccacgcaggcgaagcaccaggtgaagcgttgactccttctggatgttgtag 1387
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 93.7 bits (47), Expect = 2e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 103 catgaccnggcacttacttgccaccacgcaggcgaagcaccaggtgaagggtagactcct 162 |||| || |||||||||| ||||||||| || || ||||||||||||||||| ||||||| Sbjct: 963 catggccaggcacttactggccaccacggagacggagcaccaggtgaagggtggactcct 904 Query: 163 tctggatgttgtag 176 |||||||||||||| Sbjct: 903 tctggatgttgtag 890 Score = 79.8 bits (40), Expect = 3e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 717 tgccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 662 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 261 tgccaccgcggaggcggagcaccaggtggagggtggactccttctggatgttgtag 206 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 489 tgccaccgcggaggcggagcaccaagtggagggtggactccttctggatgttgtag 434
>emb|X56803.1|TAMRNAU T.aestivum L. mRNA for ubiquitin Length = 436 Score = 91.7 bits (46), Expect = 7e-16 Identities = 90/105 (85%) Strand = Plus / Minus Query: 72 agacctgtgaaccctgagacagaagcaacgtcatgaccnggcacttacttgccaccacgc 131 |||| ||||||||| |||||||||||| | |||| || || |||||| ||||||||| Sbjct: 280 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 221 Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 || || ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 220 agacggagcaccaagtgaagggtggactccttctggatgttgtag 176
>emb|X56601.1|TAUBIQU Wheat mRNA for ubiquitin Length = 436 Score = 91.7 bits (46), Expect = 7e-16 Identities = 90/105 (85%) Strand = Plus / Minus Query: 72 agacctgtgaaccctgagacagaagcaacgtcatgaccnggcacttacttgccaccacgc 131 |||| ||||||||| |||||||||||| | |||| || || |||||| ||||||||| Sbjct: 280 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 221 Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 || || ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 220 agacggagcaccaagtgaagggtggactccttctggatgttgtag 176
>gb|DQ086482.1| Triticum aestivum ubiquitin (Ubiq) mRNA, partial cds Length = 400 Score = 91.7 bits (46), Expect = 7e-16 Identities = 90/105 (85%) Strand = Plus / Minus Query: 72 agacctgtgaaccctgagacagaagcaacgtcatgaccnggcacttacttgccaccacgc 131 |||| ||||||||| |||||||||||| | |||| || || |||||| ||||||||| Sbjct: 261 agacttgtgaacccagagacagaagcagctccatggccaggagcttactggccaccacgg 202 Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 || || ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 201 agacggagcaccaagtgaagggtggactccttctggatgttgtag 157
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 1168 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 1396 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 311 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 256 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 940 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 539 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 484 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtag 712
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 1165 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 1393 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 308 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 253 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 937 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 536 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 481 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 741 aggtgaagcgttgactccttctggatgttgtag 709
>ref|XM_755642.1| Ustilago maydis 521 hypothetical protein (UM04588.1) partial mRNA Length = 480 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 227 ccaccacgcagacgaagcaccaagtgcagggtagactccttctggatgttgtag 174
>dbj|AB226314.1| Aspergillus oryzae cDNA, contig sequence: AoEST3176 Length = 955 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 516 ccaccacgcaggcggagcacgaggtgaagggtggactccttctggatgttgtag 463
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1835102 ccaccacgcaggcggagcacgaggtgaagggtggactccttctggatgttgtag 1835049 Score = 52.0 bits (26), Expect = 6e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 |||||||| || ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 3220630 ccaccacggagacgaagaacaaggtggagggtggactccttctggatgtt 3220679 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 153 gtagactccttctggatgttgta 175 |||||||| |||||||||||||| Sbjct: 3220130 gtagactctttctggatgttgta 3220152
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3340877 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 3340930 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 3340649 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 3340702 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 3341787 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 3341842 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 3341105 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 3341158 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 3341559 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 3341614 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 3341354 aggtgaagcgttgactccttctggatgttgtag 3341386
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3924 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 3871 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 4152 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 4099 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 3014 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 2959 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 3696 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 3643 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 3242 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 3187 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 3447 aggtgaagcgttgactccttctggatgttgtag 3415
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 89737 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 89790 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 89509 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 89562 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 90647 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 90702 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 89965 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 90018 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 90419 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 90474 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 90214 aggtgaagcgttgactccttctggatgttgtag 90246
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 83.8 bits (42), Expect = 2e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| || |||||||||||||| ||||| |||||||||||||||||| Sbjct: 1213 acttactggccaccacggagacgaagcaccaggtggagggtggactccttctggatgttg 1154 Query: 174 ta 175 || Sbjct: 1153 ta 1152 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||||||||||||| Sbjct: 502 accaggtggagggtggactccttctggatgttgtag 467 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||| Sbjct: 955 aggtggagggtggactccttctggatgttgtag 923 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgta 175 ||||| ||||| |||||||||||||||||||| Sbjct: 727 aggtggagggtggactccttctggatgttgta 696 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgta 175 ||||| ||||| |||||||||||||||||||| Sbjct: 271 aggtggagggtggactccttctggatgttgta 240
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1221 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 1168 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1449 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 1396 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 311 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 256 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 993 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 940 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 539 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 484 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtag 712
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 83.8 bits (42), Expect = 2e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1218 ccaccacggagacgaagcaccaggtggagggtagactccttctggatgttgtag 1165 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1446 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 1393 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 308 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 253 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 990 ccaccacgaaggcggagcacaaggtggagggtggactccttctggatgttgtag 937 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 536 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 481 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 741 aggtgaagcgttgactccttctggatgttgtag 709
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence Length = 151712 Score = 81.8 bits (41), Expect = 7e-13 Identities = 55/60 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 70007 tgccacctcgcaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtctg 70066
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence Length = 200622 Score = 81.8 bits (41), Expect = 7e-13 Identities = 55/60 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 164656 tgccacctcgcaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtctg 164597
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence Length = 170376 Score = 81.8 bits (41), Expect = 7e-13 Identities = 55/60 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 102798 tgccacctcgcaggcgcagcaccaggtgcagggtggactccttctggatgttgtagtctg 102739
>gb|DQ066288.1| Ixodes scapularis isolate is-all-426 ubiquitin/ribosomal protein S27a fusion protein mRNA, complete cds Length = 471 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 224 ccacgcaggcgcagcaccaggtggagggtcgactccttctggatgttgtag 174
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 77.8 bits (39), Expect = 1e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 208 gccaccacggaggcgcagcacaaggtgaagggtcgactccttctggatgttgtag 154 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 442 gccaccgcgcagacgcagcacaaggtgaagggttgactccttctggatgttgtag 388
>gb|AY099132.1| Cercomonas edax isolate pub4 polyubiquitin gene, partial cds Length = 495 Score = 77.8 bits (39), Expect = 1e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 405 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtag 351
>gb|AY099131.1| Cercomonas edax isolate pub3 polyubiquitin gene, partial cds Length = 448 Score = 77.8 bits (39), Expect = 1e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 358 gccaccacggaggcgcagcacaaggtgaagggtggactccttctggatgttgtag 304
>gb|AY099129.1| Cercomonas edax isolate pub1 polyubiquitin gene, partial cds Length = 298 Score = 77.8 bits (39), Expect = 1e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 208 gccaccacgcagacgcagcacaaggtgaagggttgactccttctggatgttgtag 154
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 77.8 bits (39), Expect = 1e-11 Identities = 49/53 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 4371 ccaccacgaaggcggagcaccaggtgaagggtggactcyttctggatgttgta 4319 Score = 73.8 bits (37), Expect = 2e-10 Identities = 60/68 (88%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| || || ||||||||||| || || |||||||||||||||||| Sbjct: 4836 acttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttg 4777 Query: 174 tagnctgc 181 ||| |||| Sbjct: 4776 tagtctgc 4769 Score = 73.8 bits (37), Expect = 2e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 4599 ccaccgcgaaggcggagcaccaggtgaagggtggactccttctggatgttgta 4547 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 3900 agcaccaggtggagggtggactccttctggatgttgtag 3862 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || || ||||||||||||||||||||| Sbjct: 4128 agcacaaggtggagagtcgactccttctggatgttgtag 4090
>gb|L23315.1|ECCUBIQA Echinococcus multilocularis ubiquitin mRNA, complete cds Length = 304 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 245 ccacgcaggcgaagcaccaggtgaagagtcgactccttctgaatgttgtag 195
>gb|AY748811.1| Thaumatomonas sp. DDM-2005 polyubiquitin (UBQ) gene, partial cds Length = 306 Score = 77.8 bits (39), Expect = 1e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 228 gccaccgcgcaggcggagcacgaggtgaagggttgactccttctggatgttgtag 174
>gb|AY251801.1| Lotharella globosa ubiquitin/actin fusion protein 3 gene, partial cds Length = 715 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || || |||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaccacgaagacggaggaccaggtgaagggtagactccttctggatgttgtag 154
>gb|AY251797.1| Lotharella amoeboformis ubiquitin/actin fusion protein 2 gene, partial cds Length = 706 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 207 ccaccacgaaggcggagcacaaggtgaagagtagactccttctggatgttgtag 154
>emb|BX062024.1|CNS09K0S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43AE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 259 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgtag 206
>emb|BX039028.1|CNS092A0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 714 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 284 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgtag 231
>emb|BX033807.1|CNS08Y8Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5BG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 803 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 262 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgtag 209
>emb|BX012983.1|CNS08I6J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA2CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 523 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 253 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgtag 200
>emb|BX008186.1|CNS08EHA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 826 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 278 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgtag 225
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 287 ccaccacggagacggagcaccaagtgaagggtagactccttctggatgttgtag 234
>gb|AY072820.1| Oryza sativa ubiquitin mRNA, partial cds Length = 394 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 188 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 135
>dbj|AB070528.1| Physarum polycephalum ub4 mRNA for ubiquitin 4, complete cds Length = 1266 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 115 cttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgt 174 |||| ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1113 cttagttgccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgt 1054 Query: 175 ag 176 || Sbjct: 1053 ag 1052 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||| ||| ||||| |||||||| |||||||||||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtag 596 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctgaatattgtag 140
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct: 28020535 acttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttg 28020476 Query: 174 ta 175 || Sbjct: 28020475 ta 28020474 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 28020280 accaggtgaagggtggactccttctggatgttgtag 28020245 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 28019371 agcacaaggtggagggtagactccttctggatgttgtag 28019333 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 27575457 aggcgaaggacaaggtggagggtggactccttctggatgttgta 27575500 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 28020055 agcacaaggtggagggtggactccttctggatgttgtag 28020017 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 28019599 agcacaaggtggagggtggactccttctggatgttgtag 28019561 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 28019143 agcacaaggtggagggtggactccttctggatgttgtag 28019105 Score = 50.1 bits (25), Expect = 0.002 Identities = 43/49 (87%) Strand = Plus / Plus Query: 127 cacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||| ||||| ||||||||||| | ||| ||||||||||| |||||||| Sbjct: 27575224 cacggaggcggagcaccaggtgcaaggtggactccttctgaatgttgta 27575272 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Minus Query: 137 aagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 28019828 aagcacaaggtggagggtggattccttctggatgttgtag 28019789
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct: 65354 acttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttg 65295 Query: 174 ta 175 || Sbjct: 65294 ta 65293 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 65099 accaggtgaagggtggactccttctggatgttgtag 65064 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 64190 agcacaaggtggagggtagactccttctggatgttgtag 64152 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 64874 agcacaaggtggagggtggactccttctggatgttgtag 64836 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 64418 agcacaaggtggagggtggactccttctggatgttgtag 64380 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 63962 agcacaaggtggagggtggactccttctggatgttgtag 63924 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Minus Query: 137 aagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 64647 aagcacaaggtggagggtggattccttctggatgttgtag 64608
>gb|AY297059.1| Triticum aestivum ubiquitin (WUB1) mRNA, complete cds Length = 450 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 111 ggcacttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatg 170 |||||||||| ||||||||| || || ||||||| ||||||||| ||||||||||||||| Sbjct: 239 ggcacttactggccaccacggagacggagcaccaagtgaagggtggactccttctggatg 180 Query: 171 tt 172 || Sbjct: 179 tt 178
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct: 1675 acttactggccaccacggaggcggagcaccaggtggagtgtggactccttctggatgttg 1616 Query: 174 ta 175 || Sbjct: 1615 ta 1614 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 1420 accaggtgaagggtggactccttctggatgttgtag 1385 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 511 agcacaaggtggagggtagactccttctggatgttgtag 473 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 739 agcacaaggtggagggtggactccttctggatgttgtag 701 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 283 agcacaaggtggagggtggactccttctggatgttgtag 245 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Minus Query: 137 aagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 968 aagcacaaggtggagggtggattccttctggatgttgtag 929 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||| ||||||| Sbjct: 1195 agcacaaggtggagggtggactccttctggacgttgtag 1157
>gb|AF216530.1|AF216530 Oryza sativa ubiquitin RiP-20 mRNA, partial cds Length = 456 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 213 ccaccacggaggcggagcaccaggtggagggtggactccttctggatgttgtag 160
>dbj|AK108207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D06, full insert sequence Length = 686 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 279 ccaccacgcaggcggagcacgaggtggagggtcgactccttctggatgttgtag 226
>gb|M60176.1|BLYMUB2 Barley ubiquitin (mub2) gene, complete cds Length = 1730 Score = 75.8 bits (38), Expect = 4e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 976 ccaccacgaaggcggagcaccaggtggagggtggactccttctggatgttgtag 923
>dbj|AB045758.1| Physarum polycephalum ppub4 mRNA for polyubiquitin, complete cds Length = 1266 Score = 75.8 bits (38), Expect = 4e-11 Identities = 56/62 (90%) Strand = Plus / Minus Query: 115 cttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgt 174 |||| ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1113 cttagttgccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgt 1054 Query: 175 ag 176 || Sbjct: 1053 ag 1052 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||| ||| ||||| |||||||| |||||||||||| Sbjct: 649 ccaccacgaaggcggagcaccaagtggagggtggactccttttggatgttgtag 596 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||| ||||| ||||||||||| || |||||| Sbjct: 193 ccaccacgaaggcggagcaccaggtggagggtggactccttctgaatattgtag 140
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22, complete sequence Length = 145104 Score = 73.8 bits (37), Expect = 2e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 4920 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtag 4876
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 2e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 8381377 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtag 8381333 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||| Sbjct: 7073919 aggtggagggtggactccttctggatgttgtag 7073951
>emb|BX070400.1|CNS09QHG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7BH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 789 Score = 73.8 bits (37), Expect = 2e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 347 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgta 399
>emb|BX070399.1|CNS09QHF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7BH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 877 Score = 73.8 bits (37), Expect = 2e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 461 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgta 409
>dbj|AB070526.1| Physarum polycephalum ub2 mRNA for ubiquitin 2, complete cds Length = 985 Score = 73.8 bits (37), Expect = 2e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 120 ttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 886 ttgccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtag 830 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||||| || || ||||||| ||||||||| |||||||||||||||||||| Sbjct: 201 tgccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttgta 147 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||| || ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 427 ccaccgcgaaggcgaagcaccaagtgaagggtggactccttctggatgtt 378 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||||||||||| ||||||||| ||||| ||||| |||||||| Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttgta 603
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 2e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 8379212 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtag 8379168 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||| Sbjct: 7071814 aggtggagggtggactccttctggatgttgtag 7071846
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 73.8 bits (37), Expect = 2e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 118633 aggcgaagcaccaggtgaagcgtggactccttctggatgttgtag 118589
>ref|XM_317466.2| Anopheles gambiae str. PEST ENSANGP00000012302 (ENSANGG00000020724), mRNA Length = 779 Score = 73.8 bits (37), Expect = 2e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 281 ccaccgcgcaggcgcagcaccagatgaagggtcgactccttctggatgttgta 229
>gb|AF081142.1|AF081142 Cricetulus sp. ubiquitin/ribosomal protein CEP52 fusion protein mRNA, complete cds Length = 496 Score = 73.8 bits (37), Expect = 2e-10 Identities = 54/60 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||||| ||||||||||||||||| | ||| ||||| ||||||||||||||| ||| Sbjct: 267 tgccaccacgaaggcgaagcaccaggtgcaaggtggactctttctggatgttgtagtctg 208
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 73.8 bits (37), Expect = 2e-10 Identities = 42/44 (95%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2470 agcaccaggtgaagggtggactccttctggatgttgtagtctgc 2427 Score = 69.9 bits (35), Expect = 3e-09 Identities = 58/66 (87%) Strand = Plus / Minus Query: 116 ttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| ||||||||| || || ||||||||||| || || |||||||||||||||||||| Sbjct: 2720 ttactggccaccacggagacggagcaccaggtggagagtggactccttctggatgttgta 2661 Query: 176 gnctgc 181 | |||| Sbjct: 2660 gtctgc 2655 Score = 58.0 bits (29), Expect = 1e-05 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| | ||| ||||||||||||||||||||| Sbjct: 2014 agcaccaggtggasggtggactccttctggatgttgtag 1976
>dbj|AB045756.1| Physarum polycephalum ppub2 mRNA for polyubiquitin, complete cds Length = 985 Score = 73.8 bits (37), Expect = 2e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 120 ttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 886 ttgccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtag 830 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||||| || || ||||||| ||||||||| |||||||||||||||||||| Sbjct: 201 tgccaccacgtagacggagcaccaagtgaagggtggactccttctggatgttgta 147 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||| || ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 427 ccaccgcgaaggcgaagcaccaagtgaagggtggactccttctggatgtt 378 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||||||||||| ||||||||| ||||| ||||| |||||||| Sbjct: 655 ccaccacgaaggcgaagcaccaagtgaagggtggactctttctgaatgttgta 603
>gb|DQ100437.1| Ancyromonas sigmoides polyubiquitin (pub) gene, partial cds Length = 192 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| |||||||| || || |||||||| |||||||||||||||||||||||| Sbjct: 85 tgccaccgcgcaggcggaggacgaggtgaagcgtagactccttctggatgttgtag 30
>gb|BT016508.1| Zea mays clone Contig341 mRNA sequence Length = 658 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 353 tgccaccgcgaaggcgaagaacaaggtgaagggtggactccttctggatgttgtag 408
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 32138 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 32083 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 31910 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 31855 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 33277 gccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 33223 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 33050 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 32995 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| |||||| || ||||||||||||||||||||| Sbjct: 32822 tgccaccacgcagacgcaggaccaagtgaagagtcgactccttctggatgttgtag 32767 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 32594 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 32539 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 32366 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 32311 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||||| || || |||| ||||||||| || ||||||||||||||||| Sbjct: 27931 tgccaccacgcagacgcaggaccaagtgaagggtcgattccttctggatgttgta 27877 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 27703 tgccaccacgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 27648 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 146 gtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||||||||||||||||||| Sbjct: 28134 gtgaagggtcgactccttctggatgttgtag 28104 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 27475 tgccaccccgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 27420
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 54323 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 54378 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 54095 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 54150 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 52956 gccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 53010 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 53867 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 53922 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 53639 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 53694 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| |||||| || ||||||||||||||||||||| Sbjct: 53411 tgccaccacgcagacgcaggaccaagtgaagagtcgactccttctggatgttgtag 53466 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 53183 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 53238 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||||| || || |||| ||||||||| || ||||||||||||||||| Sbjct: 58302 tgccaccacgcagacgcaggaccaagtgaagggtcgattccttctggatgttgta 58356 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 58530 tgccaccacgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 58585 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 146 gtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||||||||||||||||||| Sbjct: 58099 gtgaagggtcgactccttctggatgttgtag 58129 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 58758 tgccaccccgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 58813
>ref|NM_167065.1| Drosophila melanogaster CG32744-PA (CG32744) mRNA, complete cds Length = 1913 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 598 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 543 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 370 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 315 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 1737 gccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 1683 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 1510 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 1455 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| |||||| || ||||||||||||||||||||| Sbjct: 1282 tgccaccacgcagacgcaggaccaagtgaagagtcgactccttctggatgttgtag 1227 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 1054 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 999 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 826 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 771
>ref|XM_550846.1| Anopheles gambiae str. PEST ENSANGP00000028450 (ENSANGG00000024959), partial mRNA Length = 2289 Score = 71.9 bits (36), Expect = 6e-10 Identities = 48/52 (92%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1369 tgccaccacgcagacgaagaaccagatgaagagtagactccttctggatgtt 1318 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 2279 ccaccacgcagacggagaaccagatgaagggtggactccttctggatgtt 2230 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 2051 ccaccacgcagacggagaaccagatgaagggtggactccttctggatgtt 2002 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 1823 ccaccacgcagacggagaaccagatgaagagtagactccttctggatgtt 1774 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 1595 ccaccacgcagacggagtaccagatgaagggtggactccttctggatgtt 1546 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 683 ccaccacgcagacggagaaccagatgaagggtggactccttctggatgtt 634 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 455 ccaccacgcagacggagaaccagatgaagggtggactccttctggatgtt 406 Score = 44.1 bits (22), Expect = 0.14 Identities = 43/50 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| || |||||||| ||||| Sbjct: 1139 ccaccacgcagacggagaaccagatgaagggtggattccttctgaatgtt 1090 Score = 44.1 bits (22), Expect = 0.14 Identities = 43/50 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| || |||||||| ||||| Sbjct: 911 ccaccacgcagacggagaaccagatgaagggtggattccttctgaatgtt 862 Score = 44.1 bits (22), Expect = 0.14 Identities = 43/50 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| ||||| || || |||||||||||||| Sbjct: 227 ccaccacgcagacggagaaccagatgaagagtggattccttctggatgtt 178
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 311 tgccaccacggaggcggaggacaaggtgaagggtcgactccttctggatgttgtag 256 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| ||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 539 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgtag 484 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||||||||||||| Sbjct: 744 aggtgaagcgttgactccttctggatgttgtag 712 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 960 gactccttctggatgttgtag 940
>gb|AY104762.1| Zea mays PCO089719 mRNA sequence Length = 721 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 334 tgccaccgcgaaggcgaagaacaaggtgaagggtggactccttctggatgttgtag 279
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 44182 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 44237 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 43954 tgccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 44009 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 42815 gccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 42869 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 43726 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 43781 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 43498 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 43553 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| |||||| || ||||||||||||||||||||| Sbjct: 43270 tgccaccacgcagacgcaggaccaagtgaagagtcgactccttctggatgttgtag 43325 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 43042 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 43097 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||||| || || |||| ||||||||| || ||||||||||||||||| Sbjct: 48161 tgccaccacgcagacgcaggaccaagtgaagggtcgattccttctggatgttgta 48215 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 48389 tgccaccacgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 48444 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 146 gtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||||||||||||||||||| Sbjct: 47958 gtgaagggtcgactccttctggatgttgtag 47988 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||| || || |||| || || ||| ||||||||||||||||||||| Sbjct: 48617 tgccaccccgcagacgcaggaccaagtaaatggtcgactccttctggatgttgtag 48672
>dbj|D16248.1|SOYUBI Glycine max Subi-1 gene for ubiquitin, complete cds Length = 4955 Score = 71.9 bits (36), Expect = 6e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| || ||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 3316 tgccaccacggagacgaaggacaaggtgaagggttgactccttctggatgttgtag 3261 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| || || || || ||||||||||| || |||||||||||||||||| Sbjct: 3544 tgccaccacggagacggaggacgaggtgaagggttgattccttctggatgttgtag 3489 Score = 44.1 bits (22), Expect = 0.14 Identities = 46/54 (85%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || | ||||| ||| || || ||||||||||||||||||||| Sbjct: 3770 ccaccacgaagacgcaacaccaagtggagagttgactccttctggatgttgtag 3717 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 3965 gactccttctggatgttgtag 3945
>ref|NM_178961.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.3 mRNA, complete cds Length = 1499 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1260 agcaccaagtgaagggtagactccttctggatgttgtag 1222 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 1030 caccaagtgaagtgtagactccttctgaatgttgtag 994 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 795 tgaagtgtggactccttctggatgttgtag 766
>ref|NM_116523.2| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.1 mRNA, complete cds Length = 1202 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 963 agcaccaagtgaagggtagactccttctggatgttgtag 925 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 733 caccaagtgaagtgtagactccttctgaatgttgtag 697 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 498 tgaagtgtggactccttctggatgttgtag 469
>ref|NM_178960.1| Arabidopsis thaliana UBQ14; protein binding AT4G02890 (UBQ14) transcript variant AT4G02890.2 mRNA, complete cds Length = 975 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 agcaccaagtgaagggtagactccttctggatgttgtag 698 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 506 caccaagtgaagtgtagactccttctgaatgttgtag 470 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 271 tgaagtgtggactccttctggatgttgtag 242
>gb|AY826135.1| Aedes albopictus clone AL_315 ribosomal protein S27a mRNA, complete cds Length = 471 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 228 gccaccacggaggcgcagcaccaagtgcagggtggactccttctggatgttgtag 174
>gb|DQ098278.1| Cercomonas longicauda polyubiquitin (pub) gene, partial cds Length = 207 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || ||||||||||| || || ||||||||||||||||||||| Sbjct: 84 gccaccacgcagacgcagcaccaggtgcagcgtcgactccttctggatgttgtag 30
>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete sequence Length = 98527 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 75859 agcaccaagtgaagggtagactccttctggatgttgtag 75897 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 76089 caccaagtgaagtgtagactccttctgaatgttgtag 76125 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Plus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 76324 tgaagtgtggactccttctggatgttgtag 76353
>gb|BT017442.1| Zea mays clone EL01N0405B08.c mRNA sequence Length = 805 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 318 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtag 264
>gb|AY440451.1| Armigeres subalbatus ASAP ID: 39187 cytosolic large ribosomal subunit L40 mRNA sequence Length = 611 Score = 69.9 bits (35), Expect = 3e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| || || |||||||| || ||||||||||||||||||||||||||| ||| Sbjct: 282 ccaccacggagacgcagcaccagatggagggtagactccttctggatgttgtagtctg 225
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 813 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 759 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 357 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 303 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1021 accaggtgcagggtcgactctttctggatgttgta 987 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 565 accaggtgcagggttgactctttctggatgttgta 531
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 752 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 698 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| |||||||||||||||||||| Sbjct: 504 accaggtgcagggttgactccttctggatgttgta 470 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 960 accaggtgcagggtcgactctttctggatgttgta 926 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 276 accaggtgcagggttgactctttctggatgttgta 242
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 730 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 274 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 992 accaggtgcagggtcgactctttctggatgttgta 958 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 536 accaggtgcagggttgactctttctggatgttgta 502
>gb|AY251802.1| Gymnochlora stellata ubiquitin/actin fusion protein gene, partial cds Length = 1327 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 204 ccacgaaggcgaaggacgaggtgaagggtggactccttctggatgttgtag 154
>emb|X73119.1|LTLTUBEPA L.tarentolae LtUB-EP52 (A) gene for ubiquitin-fusion protein Length = 823 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 462 gccaccgcgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtag 408
>emb|X73118.1|LTLTUBEP L.tarentolae lTuB-ep52 (b) gene for ubiquitin-fusion protein Length = 552 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 356 gccaccgcgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtag 302
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 738 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 684 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 282 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 228 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 946 accaggtgcagggtcgactctttctggatgttgta 912 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 490 accaggtgcagggttgactctttctggatgttgta 456
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 124529 agcaccaagtgaagggtagactccttctggatgttgtag 124567 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 124759 caccaagtgaagtgtagactccttctgaatgttgtag 124795 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Plus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 124994 tgaagtgtggactccttctggatgttgtag 125023
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 121777 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 121831 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 121321 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 121375 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Plus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 121569 accaggtgcagggttgactctttctggatgttgta 121603 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Plus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 121113 accaggtgcagggtcgactctttctggatgttgta 121147
>gb|AY118459.1| Drosophila melanogaster GH17513 full insert cDNA Length = 1132 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| || || |||| ||||||||| ||||||||||||||||||||| Sbjct: 938 gccaccacgcagacgcaggaccaagtgaagggtcgactccttctggatgttgtag 884 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 711 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 656 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || |||| |||||| || ||||||||||||||||||||| Sbjct: 483 tgccaccacgcagacgcaggaccaagtgaagagtcgactccttctggatgttgtag 428 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct: 255 tgccaccacgcagacgcaagaccaagtgaagggtcgactccttctggatgttgtag 200
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 730 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 274 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 992 accaggtgcagggtcgactctttctggatgttgta 958 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 536 accaggtgcagggttgactctttctggatgttgta 502
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 783 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 729 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 327 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 273 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 991 accaggtgcagggtcgactctttctggatgttgta 957 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 535 accaggtgcagggttgactctttctggatgttgta 501
>dbj|AK160683.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010009A18 product:Similar to polyubiquitin (Fragment) homolog [Bos taurus], full insert sequence Length = 821 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 325 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 271
>gb|AF429430.1|AF429430 Olea europaea polyubiquitin OUB2 mRNA, complete cds Length = 1666 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| || || || || ||||||||||||||||||||||||||||||||| Sbjct: 1449 gccaccacggagacggaggacaaggtgaagggtagactccttctggatgttgtag 1395
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 782 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 728 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||| ||||||| Sbjct: 326 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggttgttgta 272 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 990 accaggtgcagggtcgactctttctggatgttgta 956 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 534 accaggtgcagggttgactctttctggatgttgta 500
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 730 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 274 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 992 accaggtgcagggtcgactctttctggatgttgta 958 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 536 accaggtgcagggttgactctttctggatgttgta 502
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 785 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 731 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 329 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 275 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 993 accaggtgcagggtcgactctttctggatgttgta 959 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 537 accaggtgcagggttgactctttctggatgttgta 503
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 556 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 502 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 274 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 764 accaggtgcagggtcgactctttctggatgttgta 730
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 784 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 730 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 328 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 274 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 992 accaggtgcagggtcgactctttctggatgttgta 958 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 536 accaggtgcagggttgactctttctggatgttgta 502
>gb|AY042884.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 927 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 735 agcaccaagtgaagggtagactccttctggatgttgtag 697 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 505 caccaagtgaagtgtagactccttctgaatgttgtag 469 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 270 tgaagtgtggactccttctggatgttgtag 241
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 785 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 731 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 329 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 275 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 993 accaggtgcagggtcgactctttctggatgttgta 959 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 537 accaggtgcagggttgactctttctggatgttgta 503
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 815 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 761 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 359 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 305 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1023 accaggtgcagggtcgactctttctggatgttgta 989 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 567 accaggtgcagggttgactctttctggatgttgta 533
>gb|DQ011576.1| Euphorbia characias polyubiquitin mRNA, partial cds Length = 1100 Score = 69.9 bits (35), Expect = 3e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggat 169 ||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1097 ccaccacgcagacgaaggacaaggtgaagggtagactccttctggat 1051
>gb|AY072292.1| Spodoptera frugiperda ribosomal protein S27A mRNA, complete cds Length = 580 Score = 69.9 bits (35), Expect = 3e-09 Identities = 52/58 (89%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||||||||| ||||||| ||| || || ||||||||||||||||||||| ||| Sbjct: 263 ccaccacgcaggcggagcaccaagtggagcgtggactccttctggatgttgtagtctg 206
>gb|AY087759.1| Arabidopsis thaliana clone 38261 mRNA, complete sequence Length = 1190 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 964 agcaccaagtgaagggtagactccttctggatgttgtag 926 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 734 caccaagtgaagtgtagactccttctgaatgttgtag 698 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 499 tgaagtgtggactccttctggatgttgtag 470
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 208 gccaccgcgcagacgcagcacaaggtgaagggtcgactccttctggatgttgtag 154 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 442 gccaccgcgcagacgcagcacaaggtgcagggtcgactccttctggatgttgtag 388
>gb|AY099137.1| Cercomonas edax isolate pub9 polyubiquitin gene, partial cds Length = 495 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 405 gccaccgcgcagacgcagcacaaggtgaagggtcgactccttctggatgttgtag 351
>gb|AY099136.1| Cercomonas edax isolate pub8 polyubiquitin gene, partial cds Length = 412 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 322 gccaccgcgcagacgcagcacaaggtgaagggtcgactccttctggatgttgtag 268
>gb|AY099135.1| Cercomonas edax isolate pub7 polyubiquitin gene, partial cds Length = 532 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 442 gccaccgcgcagacgcagcacaaggtgaagggttgactccttctggatgttgtag 388 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 208 gccaccgcgcagacgcagcacaaggtgaagggtcgactccttctggatgttgtag 154
>gb|AY099134.1| Cercomonas edax isolate pub6 polyubiquitin gene, partial cds Length = 298 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 208 gccaccgcgcagacgcagcacaaggtgaagggttgactccttctggatgttgtag 154
>gb|AY099130.1| Cercomonas edax isolate pub2 polyubiquitin gene, partial cds Length = 408 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 318 gccaccgcgcagacgcagcacaaggtgaagggtcgactccttctggatgttgtag 264
>dbj|AK218882.1| Mus musculus cDNA, clone:Y2G0146K08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000019649, based on BLAT search Length = 97 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 70 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 16
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||||| |||||||| || ||||| ||||| |||||||||||||||||||| Sbjct: 229 tgccaccacgaaggcgaagtacgaggtggagggtggactccttctggatgttgta 175 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||||| ||||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 685 tgccaccacggaggcggaggacaaggtggagggtggactccttctggatgttgta 631 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| || || |||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 457 tgccaccccgaagtcgaagcacaaggtggagggtggactccttctggatgttgta 403 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 896 agcacaaggtgaagggtagactccttctgaatgttgta 859 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| ||||||||||||||||| || |||||||| |||||||| Sbjct: 1130 aggcggagcaccaggtgaagggtggattccttctgaatgttgta 1087
>gb|BT001165.1| Arabidopsis thaliana Unknown protein (At4g02890) mRNA, complete cds Length = 787 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 668 agcaccaagtgaagggtagactccttctggatgttgtag 630 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 438 caccaagtgaagtgtagactccttctgaatgttgtag 402 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 203 tgaagtgtggactccttctggatgttgtag 174
>gb|U29161.1|ZMU29161 Zea mays clone MubG7 ubiquitin fusion protein gene, complete cds Length = 2985 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 2156 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtag 2102
>gb|L05394.1|ATHUBQ14G Arabidopsis thaliana polyubiquitin (ubq14) gene sequence Length = 1605 Score = 69.9 bits (35), Expect = 3e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1367 agcaccaagtgaagggtagactccttctggatgttgtag 1329 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Minus Query: 140 caccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||| |||||||||||||| ||||||||| Sbjct: 1137 caccaagtgaagtgtagactccttctgaatgttgtag 1101 Score = 44.1 bits (22), Expect = 0.14 Identities = 28/30 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 ||||| || ||||||||||||||||||||| Sbjct: 902 tgaagtgtggactccttctggatgttgtag 873
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin Length = 1172 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 789 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 735 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| | ||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 333 tgccacctctcaggcgaaggaccaggtgcagggttgactccttctggatgttgta 279 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 997 accaggtgcagggtcgactctttctggatgttgta 963 Score = 46.1 bits (23), Expect = 0.036 Identities = 32/35 (91%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| ||||| |||||||||||||| Sbjct: 541 accaggtgcagggttgactctttctggatgttgta 507
>gb|M68937.1|MZEUBFA Zea mays ubiquitin fusion protein (UBF9) gene, complete cds Length = 1624 Score = 69.9 bits (35), Expect = 3e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1134 gccacctcggaggcggagcaccaggtggagggtggactccttctggatgttgtag 1080
>gb|DQ098274.1| Sainouron mikroteron polyubiquitin (pub) gene, partial cds Length = 189 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| || |||||||||||||||||||||||| Sbjct: 86 ccaccacggaggcggagcacgaggtggagagtagactccttctggatgttgtag 33
>gb|AY432783.1| Aedes aegypti ASAP ID: 42827 cytosolic small ribosomal subunit 27A mRNA sequence Length = 793 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 357 ccaccgcgcaggcgcagcaccaagtggagggtggactccttctggatgttgtag 304
>ref|XM_369420.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06044.4) partial mRNA Length = 366 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 206 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtag 153
>ref|XM_953710.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 227 ccaccgcgcaggcggaggacaaggtggagggtagactccttctggatgttgtag 174 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| ||||||||| Sbjct: 431 tgaagggtagactccttctgaatgttgtag 402
>ref|XM_325849.1| Neurospora crassa OR74A hypothetical protein ( (X74405) polyubiquitin [Artemia franciscana] ) (NCU05995.1) partial mRNA Length = 918 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 227 ccaccgcgcaggcggaggacaaggtggagggtagactccttctggatgttgtag 174 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| ||||||||| Sbjct: 431 tgaagggtagactccttctgaatgttgtag 402
>gb|AY552058.1| Aedes aegypti ribosomal protein S27a mRNA, complete cds Length = 693 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 266 ccaccgcgcaggcgcagcaccaagtggagggtggactccttctggatgttgtag 213
>ref|XM_382132.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01956.1) partial mRNA Length = 366 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || || |||||||| ||||||||||||||||||||||||||| Sbjct: 206 ccaccacggagacggaggaccaggtggagggtagactccttctggatgttgtag 153
>ref|XM_749399.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g11270) partial mRNA Length = 441 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 146 ccaccacgcagacggagcacgaggtgcagggtcgactccttctggatgttgtag 199
>ref|XM_749400.1| Aspergillus fumigatus Af293 ubiquitin UbiC (Afu3g11260) partial mRNA Length = 465 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 227 ccaccacgcagacggagcacgaggtgcagggtcgactccttctggatgttgtag 174
>ref|XM_388944.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08768.1) partial mRNA Length = 690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||| |||||||||||||| || |||||||||||||||||| Sbjct: 683 ccaccacgaagacgaaggaccaggtgaagggttgattccttctggatgttgtag 630 Score = 52.0 bits (26), Expect = 6e-04 Identities = 47/54 (87%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| || || ||||| || || ||||||||||||||||||||| Sbjct: 455 ccaccacgaaggcggaggacgaggtggagagtcgactccttctggatgttgtag 402
>ref|XM_391117.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10941.1) partial mRNA Length = 465 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| || |||| ||||||||| ||||||||||||||||||||| Sbjct: 227 ccaccacgaaggcggaggaccaagtgaagggtggactccttctggatgttgtag 174
>gb|AY232172.1| Drosophila yakuba clone yak-ad_RpL40 mRNA sequence Length = 384 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtag 174
>gb|AY231778.1| Drosophila yakuba clone yak-em_RpL40 mRNA sequence Length = 384 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 227 ccaccacgcagacggagcaccaagtggagggtggactccttctggatgttgtag 174
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 115 cttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgt 174 |||| ||||||||||| || || || ||||||||||| || ||||||||||||||||||| Sbjct: 975 cttagttgccaccacggagacgcaggaccaggtgaagagtggactccttctggatgttgt 916 Query: 175 ag 176 || Sbjct: 915 ag 914 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 135 cgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || ||||| ||||||||||||||||||||| Sbjct: 499 cgaagcacaagatggagggtggactccttctggatgttgtag 458 Score = 46.1 bits (23), Expect = 0.036 Identities = 26/27 (96%) Strand = Plus / Minus Query: 150 agggtagactccttctggatgttgtag 176 ||||| ||||||||||||||||||||| Sbjct: 712 agggtggactccttctggatgttgtag 686 Score = 38.2 bits (19), Expect = 8.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 150 agggtagactccttctggatgtt 172 ||||| ||||||||||||||||| Sbjct: 256 agggtggactccttctggatgtt 234
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2547 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 2499 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1635 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1587 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 495 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 447 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1407 aggcgaaggaccaggtgcagggtggactccttctggatgttgta 1364 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 723 aggcgaaggaccaggtgcagggtggactccttctggatgttgta 680 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2775 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2727 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 2091 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 2043 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 1179 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 1131 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 951 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 903 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 267 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 219 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2319 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 2275 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1863 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 1819
>gb|AY251798.1| Lotharella amoeboformis ubiquitin/actin fusion protein 3 gene, partial cds Length = 706 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 207 ccaccacgaaggcggagaacaaggtgaagggtggactccttctggatgttgtag 154
>gb|AY251796.1| Lotharella amoeboformis ubiquitin/actin fusion protein 1 gene, partial cds Length = 706 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| |||||||| || ||||||||||||||||||||| Sbjct: 207 ccaccacgaaggcggagcacaaggtgaagagtggactccttctggatgttgtag 154
>emb|BX063280.1|CNS09KZO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC45AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 609 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 56 ccaccacgcagacggagaaccagatgaagggtagactccttctggatgtt 105 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| ||||||||||||||||| Sbjct: 284 ccaccacgcagacggagaaccagatgaagggtggactccttctggatgtt 333 Score = 44.1 bits (22), Expect = 0.14 Identities = 43/50 (86%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||| || ||||| |||||||| Sbjct: 512 ccaccacgcagacggagaaccagatgaagggtcgattccttttggatgtt 561
>emb|BX036489.1|CNS090BH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA8BF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 832 ccaccacgcagacggagaaccagatgaagggtagactccttctggatgtt 783
>emb|BX008187.1|CNS08EHB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 829 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || ||||| |||||||| ||||||||||||||||||||| Sbjct: 507 ccaccgcgcaggcgcagaaccagatgaagggtcgactccttctggatgttgtag 560
>emb|BX007085.1|CNS08DMP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA11DE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 753 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||| |||| |||||||| |||||||| ||||||||||||||||||||| Sbjct: 198 ccaccgcgcgggcgcagcaccagatgaagggtcgactccttctggatgttgtag 145
>emb|BX005564.1|CNS08CGG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA1AD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 482 ccaccgcgcaggcgcagcaccagatgaagggtctactccttctggatgttgtag 429
>emb|Y17003.1|SDO17003 Suberites domuncula mRNA for polyubiquitin Length = 1145 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtag 278 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || ||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 1015 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtag 962 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| || |||||||||||| Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtag 734 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| || |||||||||||| Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtag 506
>emb|Y12081.1|SDPOLUBQ1 Suberites domuncula mRNA for polyubiquitin precursor Length = 1392 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 331 ccaccacggagacgaagcaccaagtgaagggtggactctttctggatgttgtag 278 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || ||||||| ||||||||| ||||| ||||||||||||||| Sbjct: 1243 ccaccacggagacggagcaccaagtgaagggtggactctttctggatgttgtag 1190 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| || |||||||||||| Sbjct: 1015 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtag 962 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| || |||||||||||| Sbjct: 787 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtag 734 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || |||||||||| ||||||||| ||||| || |||||||||||| Sbjct: 559 ccaccacggagacgaagcaccaagtgaagggtggactctttttggatgttgtag 506
>emb|Y10024.1|STUBIEP Solanum tuberosum mRNA for ubiquitin extension protein Length = 646 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 270 ccaccacggagacgaaggacaaggtggagggtagactccttctggatgttgtag 217
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct: 1420 acttactggccaccacggaggcgcagaaccaggtggagtgtggactccttctggatgttg 1361 Query: 174 ta 175 || Sbjct: 1360 ta 1359 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 1165 accaggtgaagggtggactccttctggatgttgtag 1130 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 940 agcacaaggtggagggtggactccttctggatgttgtag 902 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 712 agcacaaggtggagggtggactccttctggatgttgtag 674 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 484 agcacaaggtggagggtggactccttctggatgttgtag 446 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 256 agcacaaggtggagggtggactccttctggatgttgtag 218
>emb|X60826.1|CRUBI3 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) Length = 730 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 233 ccaccgcgcagacgcagcaccaggtggagggtggactccttctggatgttgtag 180
>emb|X15427.1|CRUBIRP Chlamydomonas reinhardtii UBI1-ribosomal protein fusion mRNA Length = 689 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 235 ccaccgcgcagacgcagcaccaggtggagggtggactccttctggatgttgtag 182
>emb|X13140.1|NCUBQ Neurospora crassa ubiquitin gene Length = 2249 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 1091 ccaccgcgcaggcggaggacaaggtggagggtagactccttctggatgttgtag 1038 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtag 176 |||||||||||||||||||| ||||||||| Sbjct: 1295 tgaagggtagactccttctgaatgttgtag 1266
>gb|AF402838.1| Ictalurus punctatus 40S ribosomal protein S27a mRNA, complete cds Length = 544 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| | ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 262 ccaccacgcagcctcagcaccaggtgcagggtggactccttctggatgttgtag 209
>gb|AF061807.1| Elaeagnus umbellata polyubiquitin mRNA, complete cds Length = 1642 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 1423 ccaccacgaagacgaaggacaaggtgcagggtagactccttctggatgttgtag 1370 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| || | ||||| |||||| || ||||||||||| |||||||| Sbjct: 739 ccaccacgcagacgcaacaccaagtgaagagttgactccttctgaatgttgta 687 Score = 42.1 bits (21), Expect = 0.57 Identities = 45/53 (84%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| || | |||| |||||| || ||||||||||| |||||||| Sbjct: 511 ccaccacgcagacgcaaaaccaagtgaagagttgactccttctgaatgttgta 459
>ref|NM_057428.3| Drosophila melanogaster Ribosomal protein L40 CG2960-RA (RpL40), mRNA Length = 660 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 348 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtag 295
>gb|AY075451.1| Drosophila melanogaster RE10554 full length cDNA Length = 602 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 289 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtag 236
>gb|AF056623.1|AF056623 Magnaporthe grisea strain Guy-11 ubiquitin fusion protein (UEP1) mRNA, complete cds Length = 620 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| || |||| ||| ||||| ||||||||||||||||||||| Sbjct: 236 ccaccacgcaggcggaggaccaagtggagggtcgactccttctggatgttgtag 183
>dbj|AB070527.1| Physarum polycephalum ub3 mRNA for ubiquitin 3, complete cds Length = 1193 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtag 584 Score = 61.9 bits (31), Expect = 6e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||| Sbjct: 406 ccacgaaggcggagcacaaggtgaagggtggactccttatggatgttgtag 356 Score = 61.9 bits (31), Expect = 6e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtag 128 Score = 44.1 bits (22), Expect = 0.14 Identities = 52/62 (83%) Strand = Plus / Minus Query: 115 cttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgt 174 |||| ||||| ||||| ||||| ||||||| ||| | ||| ||||||||||||||||| Sbjct: 1101 cttagttgcctccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgt 1042 Query: 175 ag 176 || Sbjct: 1041 ag 1040
>gb|AC092217.1|AC092217 Drosophila melanogaster, chromosome 2L, region 24D-24E, BAC clone BACR11D14, complete sequence Length = 158347 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 54634 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtag 54687
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1619 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1571 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1391 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1343 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1163 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1115 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 707 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 659 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2303 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2255 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2075 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2027 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1847 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 1799 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 935 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 887 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 479 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 431 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 251 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 203
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct: 3077 acttactggccaccacggaggcgcagaaccaggtggagtgtggactccttctggatgttg 3018 Query: 174 ta 175 || Sbjct: 3017 ta 3016 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 2822 accaggtgaagggtggactccttctggatgttgtag 2787 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2597 agcacaaggtggagggtggactccttctggatgttgtag 2559 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2369 agcacaaggtggagggtggactccttctggatgttgtag 2331 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2141 agcacaaggtggagggtggactccttctggatgttgtag 2103 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 1913 agcacaaggtggagggtggactccttctggatgttgtag 1875
>gb|AF298826.1|AF298826 Prunus avium ubiquitin/ribosomal protein 27a (Ubi) mRNA, complete cds Length = 1323 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||| ||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 262 gccaccacggaggcgaagcacaaggtggagggtcgattccttctggatgttgta 209
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2075 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 2027 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1163 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1115 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 935 aggcgaaggaccaggtgcagggtggactccttctggatgttgta 892 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 251 aggcgaaggaccaggtgcagggtggactccttctggatgttgta 208 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2303 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2255 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 1619 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 1571 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 707 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 659 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 479 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 431 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1847 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 1803 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1391 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 1347
>gb|AY099128.1| Lotharella globosa isolate pub3 polyubiquitin gene, partial cds Length = 295 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| |||||||| || ||||||||||| || |||||||||||||||||| Sbjct: 207 ccaccacggaggcgaaggacaaggtgaagggtggattccttctggatgttgtag 154
>dbj|AB089616.1| Pongo pygmaeus UbC gene for polyubiquitin C, complete cds Length = 2286 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 135 cgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1127 cgaagcaccaggtgcagggtagactctttctggatgttgtag 1086 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1580 agcaccaggtgcagggtagactctttctggatgttgtag 1542 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| ||||||||||| |||||||||||||| Sbjct: 668 agcaccaggtgcagggtagactctttctggatgttgta 631 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| ||||||||||| |||||||||||||| Sbjct: 440 agcaccaggtgcagggtagactctttctggatgttgta 403 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 2036 agcaccaggtgcagggtggactctttctggatgttgtag 1998 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1808 agcaccaggtgcagggtggactctttctggatgttgtag 1770 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || |||||||| ||||||||||||||| Sbjct: 896 agcaccaggtgcagagtagactctttctggatgttgtag 858 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| ||||| ||||| |||||||||||||| Sbjct: 212 agcaccaggtgcagggtggactctttctggatgttgta 175 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || || ||||| ||||||||||||||| Sbjct: 1352 agcaccaggtgcagagtggactctttctggatgttgtag 1314
>gb|AF193438.1|AF193438 Hevea brasiliensis ubiquitin precursor (ubi) mRNA, complete cds Length = 1385 Score = 67.9 bits (34), Expect = 1e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||| |||||||| ||||| |||| |||||||| ||||||||||||||||||||| ||| Sbjct: 913 tgcctccacgcagacgaagaaccaaatgaagggtggactccttctggatgttgtagtctg 854 Query: 181 c 181 | Sbjct: 853 c 853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| || |||||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 685 tgccaccacgaagtcgaagcaccaagtggagggtggactccttctgaatgttgtag 630 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| || |||||||||| ||| ||||| |||||||||||||| |||||| |||| Sbjct: 227 ccaccacgaagtcgaagcaccaagtggagggtggactccttctggatattgtagtctgc 169 Score = 60.0 bits (30), Expect = 2e-06 Identities = 53/61 (86%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||| ||||| || |||||||||| ||| ||||| ||||||||||| ||||||||| ||| Sbjct: 457 tgcctccacgaagtcgaagcaccaagtggagggtggactccttctgaatgttgtagtctg 398 Query: 181 c 181 | Sbjct: 397 c 397
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1581 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1533 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 669 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 621 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 441 aggcgaaggaccaggtgcagggtggactccttctggatgttgta 398 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1809 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 1761 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 1125 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 1077 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 213 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 165 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1353 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 1309 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 897 aggcgcaggaccaggtgcagggtggactccttctggatgttgtag 853
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 196973 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtag 196920
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1619 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1571 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1391 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1343 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1163 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1115 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 707 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 659 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2303 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2255 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 2075 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 2027 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1847 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 1799 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 935 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 887 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 479 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 431 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| || |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 251 aggcgcaggaccaggtgcagggtggactccttctggatgttgtagtctg 203
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 67.9 bits (34), Expect = 1e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 114 acttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttg 173 ||||||| ||||||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct: 1429 acttactggccaccacggaggcggaggaccaggtggagtgtggactccttctggatgttg 1370 Query: 174 ta 175 || Sbjct: 1369 ta 1368 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 1174 accaggtgaagggtggactccttctggatgttgtag 1139 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||||||||||||||||| Sbjct: 946 accaggtgaagggtggactccttctggatgttgtag 911 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 721 agcacaaggtggagggtggactccttctggatgttgtag 683 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 493 agcacaaggtggagggtggactccttctggatgttgtag 455 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||||||||||||||||||| Sbjct: 259 aggtggagggtggactccttctggatgttgtag 227
>gb|AC004380.1|AC004380 Drosophila melanogaster DNA sequence (P1 DS06843 (D96)), complete sequence Length = 51065 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||||| ||||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 21114 ccaccacgcaggcggagcaccaagtgcagggtggactccttctgaatgttgtag 21061
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 1188 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 1140 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 960 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 912 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 732 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 684 Score = 67.9 bits (34), Expect = 1e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 504 aggcgaaggaccaggtgcagggtggactccttctggatgttgtagtctg 456 Score = 60.0 bits (30), Expect = 2e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||||| |||||||| | ||| ||||||||||||||||||||| ||| Sbjct: 276 aggcgaaggaccaggtgcaaggtggactccttctggatgttgtagtctg 228
>gb|U16852.1|GVU16852 Gracilaria verrucosa polyubiquitin (UBI6R) gene, complete cds Length = 2245 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| || || ||||| || |||||||||||||||||||||||||||||| Sbjct: 968 ccaccacgaagacggagcacgagatgaagggtagactccttctggatgttgtag 915 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 2105 ccacgaaggcgaagcacaaggtgaagcgtagattccttctgaatattgtag 2055 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| ||||| || ||||||||||||||| Sbjct: 1181 agcacgaggtgaagagtagattctttctggatgttgtag 1143
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 721 caggcgcagcaccaggtgcagggtggactccttctggatgttgtag 676 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| | |||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 503 tgccacctctcaggcgcaggaccaggtgcagggtggactccttctggatgttgtag 448 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| | |||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 275 tgccacctctcaggcgcaggaccaggtgcagggtggactccttctggatgttgtag 220 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 949 caggcgcaggaccaggtgcagggtggactccttctggatgttgtag 904
>dbj|AB045757.1| Physarum polycephalum ppub3 mRNA for polyubiquitin, complete cds Length = 1193 Score = 67.9 bits (34), Expect = 1e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| Sbjct: 637 ccaccacggaggcggagcaccaagtggagggtggactccttctggatgttgtag 584 Score = 61.9 bits (31), Expect = 6e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||| |||||||| |||||||||||| Sbjct: 406 ccacgaaggcggagcacaaggtgaagggtggactccttatggatgttgtag 356 Score = 61.9 bits (31), Expect = 6e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 178 ccacgaaggcggagcacaaggtgaagggtggactccttctgaatgttgtag 128 Score = 44.1 bits (22), Expect = 0.14 Identities = 52/62 (83%) Strand = Plus / Minus Query: 115 cttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgt 174 |||| ||||| ||||| ||||| ||||||| ||| | ||| ||||||||||||||||| Sbjct: 1101 cttagttgcctccacgaaggcggagcaccaagtgcaaggtgctctccttctggatgttgt 1042 Query: 175 ag 176 || Sbjct: 1041 ag 1040
>gb|DQ098273.1| Massisteria marina polyubiquitin (pub) gene, partial cds Length = 195 Score = 65.9 bits (33), Expect = 4e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 120 ttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 89 ttgccgccgcgcaggcgcagcaccaggtgcagcgtcgactccttctggatgttgtag 33
>ref|XM_522865.1| PREDICTED: Pan troglodytes similar to ubiquitin A-52 residue ribosomal protein fusion product 1 (LOC467468), mRNA Length = 444 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| |||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 286 tgccacctcgcaggcgcagcaccaggtttagggtggactctttctggatgttgtagcctg 227
>ref|NM_183832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 218 aggcggagcaccaggtggagggtcgactccttctggatgttgtag 174
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 12392 aggcggagcaccaggtgaagcgtcgactccttctggatgttgtag 12436
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1184 aggcgcagcaccaggtgcagggtggactccttctggatgttgtag 1140 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 956 aggcgcagcaccaggtgcagggtggactccttctggatgttgtag 912 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 704 gactccttctggatgttgtag 684
>ref|NM_001033930.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 1, mRNA Length = 2823 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 343 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 284
>ref|NM_003333.3| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 2, mRNA Length = 2801 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 321 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 262
>gb|DQ226617.1| Boechera divaricarpa isolate SLW-3-H06 mRNA sequence Length = 1002 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || |||||||| || ||||||||||||||||| ||||||||||| Sbjct: 710 ccaccacggagacgaagcacaagatgaagggtagactccttttggatgttgta 762 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| |||||| || |||||||||||||||||||| Sbjct: 254 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgta 306 Score = 52.0 bits (26), Expect = 6e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 135 cgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 950 cgaagcaccaaatgaagggtggactctttctggatgttgtag 991 Score = 44.1 bits (22), Expect = 0.14 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 aggtgaagggtagactccttctggat 169 |||||||||||||| ||||||||||| Sbjct: 503 aggtgaagggtagattccttctggat 528
>gb|BC019044.1| Homo sapiens cDNA clone IMAGE:4635339, **** WARNING: chimeric clone **** Length = 2503 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Plus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 495 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 554
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 383 aggcggagcaccaggtggagggtggactccttctggatgttgtag 339
>emb|X73156.1|LEPUR L.esculentum polyubiquitin repeats Length = 3885 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 2230 ccaccacgaaggcgaaggacaaggtgaagggtggactccttttggatgttgta 2178 Score = 46.1 bits (23), Expect = 0.036 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtagnctgc 181 ||||||||||||||||||||| |||| Sbjct: 3109 gactccttctggatgttgtagtctgc 3084 Score = 46.1 bits (23), Expect = 0.036 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtagnctgc 181 ||||||||||||||||||||| |||| Sbjct: 2881 gactccttctggatgttgtagtctgc 2856 Score = 42.1 bits (21), Expect = 0.57 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgta 175 |||||||||||||| || ||||||||||| Sbjct: 1978 tgaagggtagactctttttggatgttgta 1950 Score = 40.1 bits (20), Expect = 2.3 Identities = 31/35 (88%) Strand = Plus / Minus Query: 147 tgaagggtagactccttctggatgttgtagnctgc 181 ||||| |||||||| ||||||||||| ||| |||| Sbjct: 3346 tgaagagtagactctttctggatgttatagtctgc 3312
>gb|AY118702.1| Drosophila melanogaster AT20865 full insert cDNA Length = 3448 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 3109 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 3057 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2881 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2829 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2653 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 2601 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2425 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 2373 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2197 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2145 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1969 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1917 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1741 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1689 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1513 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 1461 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1285 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 1233 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1057 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1005 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 829 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 777 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 601 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 549 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 373 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 321 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 3322 agcaccaagtgaagggtcgattccttctggatgttgta 3285
>gb|AC010047.8| Drosophila melanogaster 3L BAC RP98-28E17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164201 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 139699 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 139751 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 139471 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 139523 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 139015 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 139067 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 138787 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 138839 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 138559 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 138611 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 138331 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 138383 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 138103 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 138155 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 139927 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttgta 139979 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 139243 ccaccacgaagacgaaggaccaagtgaagggtggactccttctgaatgttgta 139295 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 137890 agcaccaagtgaagggtcgattccttctggatgttgta 137927
>emb|CR624915.1| full-length cDNA clone CS0DE004YN17 of Placenta of Homo sapiens (human) Length = 1187 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 966 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 907
>emb|CR605557.1| full-length cDNA clone CS0DI053YA13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 490 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 241 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 182
>ref|NM_206272.1| Drosophila melanogaster Ubiquitin-63E CG11624-RC, transcript variant C (Ubi-p63E), mRNA Length = 2710 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2260 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2208 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2032 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1980 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1804 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 1752 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1576 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1524 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1348 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1296 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 892 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 840 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 664 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 612 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 1120 ccaccacgaagacgaaggaccaagtgaagggtggactccttctgaatgttgta 1068 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 436 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttgta 384 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 2473 agcaccaagtgaagggtcgattccttctggatgttgta 2436
>ref|NM_168043.2| Drosophila melanogaster Ubiquitin-63E CG11624-RA, transcript variant A (Ubi-p63E), mRNA Length = 2475 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2197 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2145 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1969 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1917 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1741 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 1689 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1513 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1461 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1285 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1233 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 829 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 777 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 601 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 549 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 1057 ccaccacgaagacgaaggaccaagtgaagggtggactccttctgaatgttgta 1005 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 373 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttgta 321 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 2410 agcaccaagtgaagggtcgattccttctggatgttgta 2373
>ref|NM_079185.4| Drosophila melanogaster Ubiquitin-63E CG11624-RB, transcript variant B (Ubi-p63E), mRNA Length = 2759 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2309 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2257 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2081 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2029 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1853 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 1801 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1625 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1573 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 1397 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 1345 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 941 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 889 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 713 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 661 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 1169 ccaccacgaagacgaaggaccaagtgaagggtggactccttctgaatgttgta 1117 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 485 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttgta 433 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 2522 agcaccaagtgaagggtcgattccttctggatgttgta 2485
>dbj|AB168934.1| Macaca fascicularis testis cDNA, clone: QtsA-15896, similar to human ubiquitin A-52 residue ribosomal protein fusionproduct 1 (UBA52), mRNA, RefSeq: NM_003333.2 Length = 551 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 280 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 221
>ref|NG_002524.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3 (UBA52P3) on chromosome 14 Length = 721 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| |||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 372 tgccacctcgcaggcgcagcaccaggtttagggtggactctttctggatgttgtagcctg 313
>gb|AF348700.1|AF348700 Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA, complete cds Length = 536 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 270 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 211
>gb|AF528678.1| Arabidopsis lyrata putative polyubiquitin gene, partial cds Length = 940 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 656 ccaccacgaaggcgcaacacaaggtgaagggtagattccttctggatgttgta 604 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| |||||| || |||||||||||||||||||| Sbjct: 860 ccaccacgaagacgaagaaccaagtgaagagtcgactccttctggatgttgta 808 Score = 42.1 bits (21), Expect = 0.57 Identities = 45/53 (84%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || |||||||| || || || ||||| ||||| ||||||||||| Sbjct: 428 ccaccacggagacgaagcacaagatggagagtagattccttttggatgttgta 376
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||||||||| || ||||||||||||||||||||| Sbjct: 22310757 aggcggagcaccaggtgaagcgtcgactccttctggatgttgtag 22310801 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||||||||||||||||||||| |||||| Sbjct: 8544840 agcactaggtgaagggtagactccttctggatattgtag 8544878 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 3475234 aggcggagcacgaggtggagggtggactccttctggatgttgtag 3475190 Score = 52.0 bits (26), Expect = 6e-04 Identities = 47/54 (87%) Strand = Plus / Plus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||| || || ||| ||||||| | ||| |||||||||||||||||||| Sbjct: 8544596 gccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttgta 8544649
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 12628961 aggcggagcaccaggtggagggtcgactccttctggatgttgtag 12629005 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 25761095 aggcggagcaccaggtgcagcgtcgactccttctggatgttgtag 25761051 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| || || ||||||||||||||||||||| Sbjct: 25765517 aggcggagcacgaggtgcagcgtcgactccttctggatgttgtag 25765473
>gb|AY957885.1| Gracilaria lemaneiformis polyubiquitin (UBQ2) mRNA, complete cds Length = 1519 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||| |||||||| |||||| | |||||||| |||||||||||||| Sbjct: 1461 ccaccacgcagacgaagcacaaggtgaggagtagactctttctggatgttgta 1409 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 306 agcacaaggtgcagggtggactccttctggatgttgtag 268 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || || ||||| || ||||| |||||||| |||||||||||||| Sbjct: 1233 ccaccacgtagacggagcacaagatgaagagtagactctttctggatgttgta 1181 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 534 agcacaaggtgcagggtggactccttctggatattgtag 496 Score = 38.2 bits (19), Expect = 8.9 Identities = 34/39 (87%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || ||||| ||||| ||||| |||||||||||| Sbjct: 762 agcacgagatgaagagtagattccttttggatgttgtag 724
>gb|AF154647.1| Nicotiana tabacum clone PR32 mRNA sequence Length = 637 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || || || || |||||||||||||||||||||||||||||||| Sbjct: 212 ccaccacggagacggaggacaaggtgaagggtagactccttctggatgttgta 160 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgta 175 ||||||||||| || ||||||||||||||||| Sbjct: 419 aggtgaagggtcgattccttctggatgttgta 388
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| | |||||| ||||||||||||||||| ||||| ||||||||||| ||| ||| Sbjct: 148355 tgccacctcacaggcgcagcaccaggtgaagggtggactctttctggatgttctagtctg 148296
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 140571 aggcggagcaccaggtggagggtcgactccttctggatgttgtag 140615
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 1139 ccaccacggaggcgaagcacgaggtgcagagtagactccttctggatattgta 1087 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 126 ccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||| ||||||| |||||| |||||||||||||| |||||||| Sbjct: 680 ccacgcaagcgcagcaccaagtgaagagtagactccttctgaatgttgta 631 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||| || |||| ||| ||||||||||||||||| |||||||| Sbjct: 911 ccaccacggaggcggagaaccaagtggagggtagactccttctgaatgttgta 859
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1125 aggcgcagcaccaggtgcagggtggactccttctggatgttgtag 1081 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 897 aggcgcagcaccaggtgcagggtggactccttctggatgttgtag 853 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 645 gactccttctggatgttgtag 625
>dbj|AK061988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B08, full insert sequence Length = 794 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 320 aggcggagcaccaggtggagggtcgactccttctggatgttgtag 276
>dbj|AK059242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-F10, full insert sequence Length = 1517 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 320 aggcggagcaccaggtggagggtcgactccttctggatgttgtag 276
>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete sequence Length = 309958 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 215325 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 215377 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 215097 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 215149 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 214641 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 214693 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 214413 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 214465 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 214185 ccaccacgaagacgaaggaccaagtgaagggtggactccttctggatgttgta 214237 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 213957 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 214009 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 213729 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 213781 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 215553 ccaccacggagacgaaggaccaagtgaagggtggactccttctgaatgttgta 215605 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct: 214869 ccaccacgaagacgaaggaccaagtgaagggtggactccttctgaatgttgta 214921 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 213516 agcaccaagtgaagggtcgattccttctggatgttgta 213553
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 7871 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 7827 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 6731 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 6687 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 6503 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 6459 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 6275 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 6231 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 7643 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 7599 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 7187 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 7143 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 6959 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 6915 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||||||||||||||||||| Sbjct: 7406 accaggtgcagggtggactccttctggatgttgtag 7371
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 65.9 bits (33), Expect = 4e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 116 ttacttgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||| |||||| ||||||||||| || ||||| ||||| || ||||||||||||||||| Sbjct: 956 ttactggccaccgcgcaggcgaaggacgaggtggagggttgattccttctggatgttgta 897 Query: 176 g 176 | Sbjct: 896 g 896 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||| ||||| || || ||||| ||||| || || ||||||||||||||||||||| Sbjct: 723 tgccgccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtag 668 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||| ||||| || || ||||| ||||| || || ||||||||||||||||||||| Sbjct: 495 tgccgccacggagacggagcacgaggtggagcgtcgactccttctggatgttgtag 440 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 232 gactccttctggatgttgtag 212
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 3007 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 2963 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 499 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 455 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2779 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2735 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2551 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2507 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2323 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2279 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2095 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2051 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||| ||||||| Sbjct: 1867 aggcggaggaccaggtgcagggtagactccttctggacgttgtag 1823 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1639 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1595 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1411 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1367 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1183 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1139 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 955 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 911 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 727 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 683 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 271 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 227
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 2551 aggcggaggaccaggtgcagggtagactccttctggatgttgtag 2507 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2323 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2279 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 2095 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 2051 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1867 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1823 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1639 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1595 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1411 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1367 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 1183 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 1139 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 955 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 911 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 727 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 683 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 499 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 455 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 271 aggcggaggaccaggtgcagggtggactccttctggatgttgtag 227
>gb|BC101830.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126879 IMAGE:8069336), complete cds Length = 506 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 287 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 228
>gb|BC101832.1| Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant 1, mRNA (cDNA clone MGC:126881 IMAGE:8069338), complete cds Length = 506 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 287 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 228
>emb|AL121579.4|CNS01DRX Human chromosome 14 DNA sequence BAC R-349A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161771 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| |||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 93398 tgccacctcgcaggcgcagcaccaggtttagggtggactctttctggatgttgtagcctg 93339
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 17574 aggcggagcaccaggtggagggtagactccttctgaatgttgtag 17530 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 17346 aggcggagcaccaagtgtagggtagactccttctgaatgttgtag 17302 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||||||||||||| Sbjct: 17106 aggtgaagggtggactccttctggatgttgtag 17074 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||||||||||||| Sbjct: 16878 aggtgaagggtggactccttctggatgttgtag 16846 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 16650 aggtggagggtggattccttctggatgttgtag 16618
>emb|Y00361.1|HSUBI1 Human mRNA fragment for ubiquitin (C-terminus) Length = 358 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 113 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 54
>emb|X56999.1|HSUBA52P Human UbA52 placental mRNA for ubiquitin-52 amino acid fusion protein Length = 501 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 247 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 188
>emb|X56998.1|HSUBA52A Human UbA52 adrenal mRNA for ubiquitin-52 amino acid fusion protein Length = 495 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| ||| Sbjct: 238 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtagtctg 179
>gb|M33122.1|DROUBSI D.melanogaster ubiquitin gene, 5' end Length = 228 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 227 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 175
>gb|M33017.1|DROUBSE D.melanogaster ubiquitin gene, 5' end Length = 228 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 227 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 175
>gb|M33016.1|DROUBSD D.melanogaster ubiquitin gene, 5' end Length = 228 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 227 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 175
>gb|M33014.1|DROUBSB D.melanogaster ubiquitin gene, 5' end Length = 228 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 227 ccaccacggagacgaagaaccaagtgaagggtggactccttctggatgttgta 175
>gb|M22428.1|DROUBIA D.melanogaster ubiquitin protein gene, complete cds Length = 2620 Score = 65.9 bits (33), Expect = 4e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 2166 ccaccacggagacgaaggaccaagtgaagggtggactccttctggatgttgta 2114 Score = 58.0 bits (29), Expect = 1e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| || || || |||| ||||||||| |||||||||||||||||||| Sbjct: 1938 ccaccacggagacggaggaccaagtgaagggtggactccttctggatgttgta 1886 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgta 175 ||||||| ||||||||| || ||||||||||||||||| Sbjct: 2379 agcaccaagtgaagggtcgattccttctggatgttgta 2342
>dbj|AB036698.1| Felis catus mRNA for ubiquitin, partial cds Length = 495 Score = 65.9 bits (33), Expect = 4e-08 Identities = 53/60 (88%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||||| |||||||||||||||| ||| ||||| ||||| |||||||| |||||| ||| Sbjct: 229 tgccaccccgcaggcgaagcaccaagtgcagggtggactctttctggatattgtagtctg 170
>gb|AY433575.1| Aedes aegypti ASAP ID: 38415 ubiquitin mRNA sequence Length = 280 Score = 63.9 bits (32), Expect = 2e-07 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| || || ||||| ||||| ||||| |||||||||||||||||| Sbjct: 203 ccaccacgcagacgcagraccagatgaagrgtagattccttctggatgttgtag 150
>gb|AY251805.1| Bigelowiella natans ubiquitin/ribosomal protein S27a fusion mRNA, complete cds Length = 624 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 247 aggcgaaggaccaggtggagggtggactccttctggatgttgta 204
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 63.9 bits (32), Expect = 2e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 |||| |||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 356 tgcctccacgcagacggagcaccagatgaagggtcgactccttctggatgtt 305 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || || || ||||||||||||||||||||| Sbjct: 573 aggcggagcaccagatggagcgtcgactccttctggatgttgtag 529
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 63.9 bits (32), Expect = 2e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 |||| |||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 280 tgcctccacgcagacggagcaccagatgaagggtcgactccttctggatgtt 229 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||| |||||||| || |||||||| || || || ||||||||||||||||||||| Sbjct: 508 tgcctccacgcagacggagcaccagatggagcgtcgactccttctggatgttgtag 453 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || || || ||||||||||||||||||||| Sbjct: 725 aggcggagcaccagatggagcgtcgactccttctggatgttgtag 681
>emb|Z14232.1|LMUBIQUTN Leishmania major ubiquitin gene Length = 937 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 129 cgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 731 cgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtag 684
>emb|X73120.1|LTUBI L.tarentolae polyubiquitin gene for ubiquitin Length = 1225 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 129 cgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 1067 cgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtag 1020
>emb|X64344.1|PCCUBI41 P.crispum mRNA Pcubi4-1 for polyubiquitin Length = 1592 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| || |||||||| ||||| || |||||||||||||| ||||||||| |||| Sbjct: 1165 ccaccacggagacgaagcacaaggtgcagagtagactccttctgaatgttgtagtctgc 1107 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Minus Query: 153 gtagactccttctggatgttgtag 176 |||||||||||||||||||||||| Sbjct: 451 gtagactccttctggatgttgtag 428 Score = 46.1 bits (23), Expect = 0.036 Identities = 41/47 (87%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggat 169 |||||||| || || | ||||| |||||| ||||||||||||||||| Sbjct: 1393 ccaccacggagacgcaacaccaagtgaagagtagactccttctggat 1347 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 676 gactccttctggatgttgtag 656 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 220 gactccttctggatgttgtag 200
>emb|CR857299.1| Pongo pygmaeus mRNA; cDNA DKFZp469J2422 (from clone DKFZp469J2422) Length = 554 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| |||||||| | ||||||||| ||||| ||||| ||||||||||||||| Sbjct: 293 tgccacctcgcaggcgcaacaccaggtgcagggtggactctttctggatgttgtag 238
>gb|L81142.1| Pisum sativum (Alaska) ubuquitin (PUB4) gene, complete cds Length = 2750 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| |||||||||||||||||||||||| Sbjct: 2239 accaggtgaagagtagactccttctggatgttgtag 2204 Score = 56.0 bits (28), Expect = 4e-05 Identities = 51/59 (86%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| || || |||||||| |||||||| || || ||||||||||||||| |||| Sbjct: 1573 ccaccacggagacggagcaccagatgaagggtggattctttctggatgttgtagtctgc 1515
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || ||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct: 16920270 tgccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtag 16920215 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 18501615 aggcggagcaccaggtgcagcgtcgactccttctggatgttgtag 18501571 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 18495908 aggcggagcaccaggtgcagcgtcgactccttctggatgttgtag 18495864 Score = 48.1 bits (24), Expect = 0.009 Identities = 48/56 (85%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || ||||| || || ||||| || || ||||||||||||||||||||| Sbjct: 22391705 tgccaccgcggaggcggaggacgaggtggagcgtggactccttctggatgttgtag 22391650 Score = 40.1 bits (20), Expect = 2.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||| |||||| || ||||||||||| ||||||||| Sbjct: 15107632 accaagtgaagagttgactccttctgaatgttgtag 15107597
>dbj|AB210844.1| Lemna paucicostata LpUBQ mRNA for ubiquitin, partial cds Length = 227 Score = 63.9 bits (32), Expect = 2e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||||||||||| || || |||||||||||||||||||| Sbjct: 218 aggcgaagcaccaggtggagagtggactccttctggatgttgta 175
>gb|AY099118.1| Chlorarachnion CCMP621 isolate pub1 polyubiquitin mRNA, complete cds Length = 1106 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| ||||| || || |||||||| || ||||||||||||||||||||| |||| Sbjct: 968 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgc 910 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| ||||| || || |||||||| || ||||||||||||||||||||| |||| Sbjct: 737 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgc 679 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| ||||| || || |||||||| || ||||||||||||||||||||| |||| Sbjct: 506 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgc 448 Score = 63.9 bits (32), Expect = 2e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctgc 181 |||||||| ||||| || || |||||||| || ||||||||||||||||||||| |||| Sbjct: 275 ccaccacgaaggcggaggacgaggtgaagagtcgactccttctggatgttgtagtctgc 217
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| || ||||| |||||||||||||| || ||||||||||| ||||||||| Sbjct: 50083 tgccaccgcggaggcggagcaccaggtgaagcgtcgactccttctgaatgttgtag 50028
>dbj|AB180455.1| Plutella xylostella mRNA for Ribosomal protein S27A, complete cds Length = 584 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 129 cgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 259 cgcaggcgcagcacgaggtgcagggtcgactccttctggatgttgtag 212
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| || || || |||||||||||||| || |||||||||||||||||| Sbjct: 584 tgccaccacggagacggagaaccaggtgaagggttgattccttctggatgttgtag 529 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Minus Query: 135 cgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||| || |||||||||||||| |||||||| ||||| Sbjct: 1026 cgaaggacaaggtgaagggtagattccttctgaatgtt 989 Score = 40.1 bits (20), Expect = 2.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgta 175 |||||||| || ||||||||||| |||||||| Sbjct: 1245 aggtgaagagtggactccttctgaatgttgta 1214 Score = 40.1 bits (20), Expect = 2.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||| || || || || ||||||||||| || ||||| || ||||||||| Sbjct: 356 tgccaccacggagacggagaactaggtgaagggttgattccttttgaatgttgtag 301
>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 139597 Score = 63.9 bits (32), Expect = 2e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 129 cgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 85341 cgcaggcgcagcaccaggtgcagcgtggactccttctggatgttgtag 85294
>gb|M74101.1|TOBUBI11A Nicotiana sylvestris (clone 6PU11) hexameric polyubiquitin (ubi11) mRNA, complete cds Length = 1606 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || || ||||| ||||| ||||||||||||||||||||| Sbjct: 723 tgccaccacgcagacggaggacaaggtggagggtggactccttctggatgttgtag 668 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||| Sbjct: 495 tgccaccacgcagacggaggacaaggtgaagggtggattccttctgaatgttgtag 440 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 121 tgccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||| ||||| || || || ||||||||||| |||||||| |||||||||||| Sbjct: 267 tgccaccgcgcagacggaggacaaggtgaagggtggactccttttggatgttgtag 212 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgtt 172 ||||||||| || |||||||| ||||||||||| || || ||||||||||| Sbjct: 1406 gccaccacggagacgaagcacgaggtgaagggtggattctttctggatgtt 1356 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 |||||||| || ||||||||||| ||||||||| Sbjct: 928 aggtgaagagtggactccttctgaatgttgtag 896
>gb|DQ098270.1| Heteromita sp. DDB-2005 polyubiquitin (pub) gene, partial cds Length = 228 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||||||||| |||||||||| ||| || || ||||||||||| ||||||||| Sbjct: 135 gccaccacgcagccgaagcaccaagtgcagcgtggactccttctgaatgttgtag 81
>gb|AY819759.1| Homo sapiens ubiquitin C splice variant (UBC) mRNA, complete cds, alternatively spliced Length = 718 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 458 agcaccaggtgcagggtagactctttctggatgttgtag 420 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 230 agcaccaggtgcagggtggactctttctggatgttgtag 192
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 61.9 bits (31), Expect = 6e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||| ||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 743 caggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctg 694 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| ||||| || |||||||||||||||||| Sbjct: 515 caggcgcagcaccaggtgcagggtggattccttctggatgttgtag 470 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| || |||||||||||||||||| Sbjct: 1198 aggcgcagcaccaggtgcagggtggattccttctggatgttgtag 1154 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| || || ||||||||||| ||||||||| Sbjct: 287 caggcgcagcaccaggtgcagagttgactccttctgaatgttgtag 242 Score = 42.1 bits (21), Expect = 0.57 Identities = 39/45 (86%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || ||||| || || ||||||||||||||| Sbjct: 970 aggcgcagcaccagatgcagggtggattctttctggatgttgtag 926
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 61.9 bits (31), Expect = 6e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||| ||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 743 caggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctg 694 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| ||||| || |||||||||||||||||| Sbjct: 515 caggcgcagcaccaggtgcagggtggattccttctggatgttgtag 470 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| ||||||||||| ||||| || |||||||||||||||||| Sbjct: 1198 aggcgcagcaccaggtgcagggtggattccttctggatgttgtag 1154 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| || || ||||||||||| ||||||||| Sbjct: 287 caggcgcagcaccaggtgcagagttgactccttctgaatgttgtag 242 Score = 42.1 bits (21), Expect = 0.57 Identities = 39/45 (86%) Strand = Plus / Minus Query: 132 aggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||| || ||||| || || ||||||||||||||| Sbjct: 970 aggcgcagcaccagatgcagggtggattctttctggatgttgtag 926
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 61.9 bits (31), Expect = 6e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||| ||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 515 caggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctg 466 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| || || ||||| ||||||||||||||| Sbjct: 287 caggcgcagcaccaggtgcagagttgactctttctggatgttgtag 242 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 1182 aggtgcagggtggattccttctggatgttgtag 1150 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 958 aggtgcagggtggattccttctggatgttgtag 926 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 718 gactccttctggatgttgtag 698
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 61.9 bits (31), Expect = 6e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||| ||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 515 caggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctg 466 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| || || ||||| ||||||||||||||| Sbjct: 287 caggcgcagcaccaggtgcagagttgactctttctggatgttgtag 242 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 1187 aggtgcagggtggattccttctggatgttgtag 1155 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 959 aggtgcagggtggattccttctggatgttgtag 927 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 718 gactccttctggatgttgtag 698
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 61.9 bits (31), Expect = 6e-07 Identities = 45/50 (90%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 |||||| ||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 515 caggcgcagcaccaggtgcagggtggattccttctggatgttgtagtctg 466 Score = 52.0 bits (26), Expect = 6e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 caggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| ||||||||||| || || ||||| ||||||||||||||| Sbjct: 287 caggcgcagcaccaggtgcagagttgactctttctggatgttgtag 242 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 1182 aggtgcagggtggattccttctggatgttgtag 1150 Score = 42.1 bits (21), Expect = 0.57 Identities = 30/33 (90%) Strand = Plus / Minus Query: 144 aggtgaagggtagactccttctggatgttgtag 176 ||||| ||||| || |||||||||||||||||| Sbjct: 958 aggtgcagggtggattccttctggatgttgtag 926 Score = 42.1 bits (21), Expect = 0.57 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gactccttctggatgttgtag 176 ||||||||||||||||||||| Sbjct: 718 gactccttctggatgttgtag 698
>gb|BT016552.1| Zea mays clone Contig385 mRNA sequence Length = 700 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || ||||| ||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 296 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttgtag 242
>gb|BT018204.1| Zea mays clone EL01N0560A10.c mRNA sequence Length = 546 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 |||||| || ||||| ||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 144 gccaccgcggaggcggagcaccaggtggagggtggactccttctgaatgttgtag 90
>gb|AY440720.1| Armigeres subalbatus ASAP ID: 43771 cytosolic small ribosomal subunit 27A mRNA sequence Length = 701 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| || || |||||||| ||||| || ||||||||||||||||||||| Sbjct: 270 gccaccacggagacgcagcaccagatgaagcgtcgactccttctggatgttgtag 216
>gb|AY440153.1| Armigeres subalbatus ASAP ID: 44141 cytosolic small ribosomal subunit S27A mRNA sequence Length = 693 Score = 61.9 bits (31), Expect = 6e-07 Identities = 49/55 (89%) Strand = Plus / Minus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||| || || |||||||| ||||| || ||||||||||||||||||||| Sbjct: 267 gccaccacggagacgcagcaccagatgaagcgtcgactccttctggatgttgtag 213
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||| |||||||||||||||||||||||||| |||||| Sbjct: 30412 agcactaggtgaagggtagactccttctggatattgtag 30450 Score = 52.0 bits (26), Expect = 6e-04 Identities = 47/54 (87%) Strand = Plus / Plus Query: 122 gccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 ||||||||| || || ||| ||||||| | ||| |||||||||||||||||||| Sbjct: 30168 gccaccacggagacggagcgccaggtgcaaggtggactccttctggatgttgta 30221
>gb|BC080583.1| Homo sapiens cDNA clone IMAGE:2822684, partial cds Length = 2187 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 937 agcaccaggtgcagggtagactctttctggatgttgtag 899 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 481 agcaccaggtgcagggtagactctttctggatgttgtag 443 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1849 agcaccaggtgcagggtggactctttctggatgttgtag 1811 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1621 agcaccaggtgcagggtggactctttctggatgttgtag 1583 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1393 agcaccaggtgcagggtggactctttctggatgttgtag 1355 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 253 agcaccaggtgcagggtggactctttctggatgttgtag 215 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 1165 agcaccaggtgcaaggtggactctttctggatgttgtag 1127 Score = 40.1 bits (20), Expect = 2.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| | ||| ||||| ||||||||||||||| Sbjct: 706 accaggtgcaaggtggactctttctggatgttgtag 671
>gb|BC039193.1| Homo sapiens ubiquitin C, mRNA (cDNA clone MGC:14624 IMAGE:4076286), complete cds Length = 2222 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 964 agcaccaggtgcagggtagactctttctggatgttgtag 926 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 508 agcaccaggtgcagggtagactctttctggatgttgtag 470 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1876 agcaccaggtgcagggtggactctttctggatgttgtag 1838 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1648 agcaccaggtgcagggtggactctttctggatgttgtag 1610 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1420 agcaccaggtgcagggtggactctttctggatgttgtag 1382 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 280 agcaccaggtgcagggtggactctttctggatgttgtag 242 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 1192 agcaccaggtgcaaggtggactctttctggatgttgtag 1154 Score = 40.1 bits (20), Expect = 2.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| | ||| ||||| ||||||||||||||| Sbjct: 733 accaggtgcaaggtggactctttctggatgttgtag 698
>gb|AY279355.1| Acanthamoeba castellanii ubiquitin-like protein Ublp94.4 mRNA, complete cds Length = 2660 Score = 61.9 bits (31), Expect = 6e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 129 cgcaggcgaagcaccaggtgaagggtagactccttctggatgttgta 175 |||||||| ||||||| ||| ||||| |||||||||||||||||||| Sbjct: 1261 cgcaggcggagcaccaagtggagggtggactccttctggatgttgta 1215
>gb|BC000449.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:2821375), partial cds Length = 2201 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 949 agcaccaggtgcagggtagactctttctggatgttgtag 911 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 493 agcaccaggtgcagggtagactctttctggatgttgtag 455 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1861 agcaccaggtgcagggtggactctttctggatgttgtag 1823 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1633 agcaccaggtgcagggtggactctttctggatgttgtag 1595 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1405 agcaccaggtgcagggtggactctttctggatgttgtag 1367 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 265 agcaccaggtgcagggtggactctttctggatgttgtag 227 Score = 46.1 bits (23), Expect = 0.036 Identities = 35/39 (89%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| | ||| ||||| ||||||||||||||| Sbjct: 1177 agcaccaggtgcaaggtggactctttctggatgttgtag 1139 Score = 40.1 bits (20), Expect = 2.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| | ||| ||||| ||||||||||||||| Sbjct: 718 accaggtgcaaggtggactctttctggatgttgtag 683
>gb|BC008955.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:3030313), partial cds Length = 1728 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 937 agcaccaggtgcagggtagactctttctggatgttgtag 899 Score = 61.9 bits (31), Expect = 6e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 481 agcaccaggtgcagggtagactctttctggatgttgtag 443 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1393 agcaccaggtgcagggtggactctttctggatgttgtag 1355 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 1165 agcaccaggtgcagggtggactctttctggatgttgtag 1127 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 138 agcaccaggtgaagggtagactccttctggatgttgtag 176 ||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 253 agcaccaggtgcagggtggactctttctggatgttgtag 215 Score = 40.1 bits (20), Expect = 2.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 141 accaggtgaagggtagactccttctggatgttgtag 176 |||||||| | ||| ||||| ||||||||||||||| Sbjct: 706 accaggtgcaaggtggactctttctggatgttgtag 671
>ref|XM_784685.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2960-PA (LOC584839), mRNA Length = 594 Score = 61.9 bits (31), Expect = 6e-07 Identities = 51/58 (87%) Strand = Plus / Minus Query: 123 ccaccacgcaggcgaagcaccaggtgaagggtagactccttctggatgttgtagnctg 180 ||||| ||||| || |||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 233 ccacctcgcagacgcagcaccagatgaagggtagattctttctggatgttgtagtctg 176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 997,904 Number of Sequences: 3902068 Number of extensions: 997904 Number of successful extensions: 62498 Number of sequences better than 10.0: 1929 Number of HSP's better than 10.0 without gapping: 1933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57894 Number of HSP's gapped (non-prelim): 4604 length of query: 181 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 159 effective length of database: 17,147,199,772 effective search space: 2726404763748 effective search space used: 2726404763748 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)