ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence Length = 866 Score = 494 bits (249), Expect = e-136 Identities = 382/428 (89%) Strand = Plus / Minus Query: 166 ccagcgtcgccgccaccacttgccttcttctggttcttcctcttcaccctgcctgcaggg 225 ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| Sbjct: 644 ccagcatcgccgccaccgcttgccttcttctgattctttctcttcacccttcctgcgggg 585 Query: 226 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcacc 285 |||||||||||||| |||| |||||| |||||||||||||||||||| || ||||||||| Sbjct: 584 cctccaccgaatgggcttgacagtgaaaagtcaatgtgcttctcagactccaccctcacc 525 Query: 286 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 345 |||||||| ||||| ||||| || |||||||||||||||||||| || ||| |||||||| Sbjct: 524 atgaatgatgggacgttgacaatttgcctgccaaccctgatgtgacgctgcttgatcaag 465 Query: 346 acacgggcatggtggatggactttgccatgccagccttgaagacaagagtctgaaggcgc 405 ||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||| ||| Sbjct: 464 acacgagcatggtgaatggacttggccatgccagccttgaagacaagtgtttgaagccgc 405 Query: 406 cttgcaaggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctca 465 ||||| |||||||||||||| || |||||||| || ||||||||||||| ||| |||||| Sbjct: 404 cttgcgaggaagttctcagcggtgagggcaagaacataatcaagcttgttctgaccctca 345 Query: 466 gcaangagcccatagcggttcatgcgacgaagaanagctgcaccctcaaagatacggcgg 525 |||| |||||||||||||||||||| ||||||| || |||||||||||||||| ||| Sbjct: 344 gcaagcagcccatagcggttcatgcggcgaagaagcgcctcaccctcaaagatacgacgg 285 Query: 526 ngattcttctcatccagtgtgagcaagtgccttgcancattacggatcctgctcaatgca 585 | |||||||| || || |||||||||||||||||| |||||||||||||||||| |||| Sbjct: 284 gggttcttctcgtcaagggtgagcaagtgccttgcagcattacggatcctgctcagtgca 225 Query: 586 tactggac 593 |||||||| Sbjct: 224 tactggac 217
>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full insert sequence Length = 884 Score = 474 bits (239), Expect = e-130 Identities = 366/410 (89%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 556 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 555 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 496 Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtgg 360 ||||| || |||||||| ||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 495 ttgacaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtgg 436 Query: 361 atggactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttc 420 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 435 atggacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttc 376 Query: 421 tcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatag 480 ||| |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| Sbjct: 375 tcaacagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataa 316 Query: 481 cggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatcc 540 ||||||||||| ||||| | || ||||||||||||| ||||| ||||||||||||| Sbjct: 315 cggttcatgcggcgaagcagtgcctcaccctcaaagatgcggcgtggattcttctcatca 256 Query: 541 agtgtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 |||||||||| ||||||||| |||||||| | |||||| |||||||| Sbjct: 255 agtgtgagcagatgccttgcattgttacggatacggctcaaagcatactg 206
>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full insert sequence Length = 884 Score = 474 bits (239), Expect = e-130 Identities = 366/410 (89%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 556 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 555 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 496 Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtgg 360 ||||| || |||||||| ||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 495 ttgacaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtgg 436 Query: 361 atggactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttc 420 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 435 atggacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttc 376 Query: 421 tcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatag 480 ||| |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| Sbjct: 375 tcaacagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataa 316 Query: 481 cggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatcc 540 ||||||||||| ||||| | || ||||||||||||| ||||| ||||||||||||| Sbjct: 315 cggttcatgcggcgaagcagtgcctcaccctcaaagatgcggcgtggattcttctcatca 256 Query: 541 agtgtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 |||||||||| ||||||||| |||||||| | |||||| |||||||| Sbjct: 255 agtgtgagcagatgccttgcattgttacggatacggctcaaagcatactg 206
>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full insert sequence Length = 970 Score = 474 bits (239), Expect = e-130 Identities = 366/410 (89%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 618 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 559 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 558 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 499 Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtgg 360 ||||| || |||||||| ||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 498 ttgacaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtgg 439 Query: 361 atggactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttc 420 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 438 atggacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttc 379 Query: 421 tcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatag 480 ||| |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| Sbjct: 378 tcaacagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataa 319 Query: 481 cggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatcc 540 ||||||||||| ||||| | || ||||||||||||| ||||| ||||||||||||| Sbjct: 318 cggttcatgcggcgaagcagtgcctcaccctcaaagatgcggcgtggattcttctcatca 259 Query: 541 agtgtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 |||||||||| ||||||||| |||||||| | |||||| |||||||| Sbjct: 258 agtgtgagcagatgccttgcattgttacggatacggctcaaagcatactg 209
>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full insert sequence Length = 972 Score = 474 bits (239), Expect = e-130 Identities = 366/410 (89%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 556 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 555 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 496 Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtgg 360 ||||| || |||||||| ||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 495 ttgacaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtgg 436 Query: 361 atggactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttc 420 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 435 atggacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttc 376 Query: 421 tcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatag 480 ||| |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| Sbjct: 375 tcaacagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataa 316 Query: 481 cggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatcc 540 ||||||||||| ||||| | || ||||||||||||| ||||| ||||||||||||| Sbjct: 315 cggttcatgcggcgaagcagtgcctcaccctcaaagatgcggcgtggattcttctcatca 256 Query: 541 agtgtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 |||||||||| ||||||||| |||||||| | |||||| |||||||| Sbjct: 255 agtgtgagcagatgccttgcattgttacggatacggctcaaagcatactg 206
>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full insert sequence Length = 955 Score = 460 bits (232), Expect = e-126 Identities = 362/407 (88%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 622 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 563 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 562 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 503 Query: 304 acgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatg 363 || || |||||||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 502 acaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtggatg 443 Query: 364 gactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctca 423 ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 442 gacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttctca 383 Query: 424 gcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcgg 483 |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| ||| Sbjct: 382 acagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataacgg 323 Query: 484 ttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagt 543 |||||||| ||||| | || ||||||| ||||| ||||| ||||||||||||| ||| Sbjct: 322 ttcatgcggcgaagcagtgcctcaccctcgaagatgcggcgtggattcttctcatcaagt 263 Query: 544 gtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 ||||||| |||||||||| |||||||| | |||||| |||||||| Sbjct: 262 gtgagcaggtgccttgcattgttacggatacggctcaaagcatactg 216
>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full insert sequence Length = 964 Score = 460 bits (232), Expect = e-126 Identities = 362/407 (88%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 611 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 552 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 551 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 492 Query: 304 acgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatg 363 || || |||||||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 491 acaatttgcctgccgaccctgatgtggcgttgcctgatcaggacacgagcatggtggatg 432 Query: 364 gactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctca 423 ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 431 gacttggccatgccagccttgaagacaagagtctgaagacgccttgcgaggaagttctca 372 Query: 424 gcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcgg 483 |||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||| ||| Sbjct: 371 acagtgagggcaaggacataatcaagcttgttctgcccatcagcaaggagcccataacgg 312 Query: 484 ttcatgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagt 543 |||||||| ||||| | || ||||||| ||||| ||||| ||||||||||||| ||| Sbjct: 311 ttcatgcggcgaagcagtgcctcaccctcgaagatgcggcgtggattcttctcatcaagt 252 Query: 544 gtgagcaagtgccttgcancattacggatcctgctcaatgcatactg 590 ||||||| |||||||||| |||||||| | |||||| |||||||| Sbjct: 251 gtgagcaggtgccttgcattgttacggatacggctcaaagcatactg 205
>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds Length = 210 Score = 323 bits (163), Expect = 4e-85 Identities = 196/207 (94%) Strand = Plus / Minus Query: 144 tcattcctcttcctcatcaccaccagcgtcgccgccaccacttgccttcttctggttctt 203 ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 210 tcattcctcttcctcgtcaccacctgcatcgccaccaccacttgccttcttctggttctt 151 Query: 204 cctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtgagaagtcaatgtg 263 |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 150 tctcttcacccggcctgcagggcctccgccgaatggacttgtcagtgagaagtcgatgtg 91 Query: 264 cttctcagattcaaccctcaccatgaatgaggggacattgacgatctgcctgccaaccct 323 |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 90 cttctcggattcaaccctcaccatgaacgacgggacattgacgatctgcctgccaaccct 31 Query: 324 gatgtggcgttgcctgatcaagacacg 350 ||||||||||||||||||||||||||| Sbjct: 30 gatgtggcgttgcctgatcaagacacg 4
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 2969541 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 2969482 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 2969481 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 2969422 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 2969421 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 2969362 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||||||||| ||||| ||||||||||||| |||||||||| |||||||| Sbjct: 2969361 tgcctcaccctcaaagatgcggcgtggattcttctcatcaagtgtgagcagatgccttgc 2969302 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 2969301 attgttacggatacggctcaaagcatactg 2969272 Score = 182 bits (92), Expect = 9e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 2970556 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 2970497 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 2970496 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 2970437 Query: 301 ttgacgatctgcctgccaaccctg 324 ||||| || |||||||| |||||| Sbjct: 2970436 ttgacaatttgcctgccgaccctg 2970413 Score = 117 bits (59), Expect = 4e-23 Identities = 135/162 (83%) Strand = Plus / Minus Query: 411 aaggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaan 470 ||||||||||||| | || || ||||| |||||||||||||||| |||||||||| ||| Sbjct: 14845074 aaggaagttctcaacggtgagcgcaagcacgtaatcaagcttgttctggccctcaccaag 14845015 Query: 471 gagcccatagcggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngatt 530 ||| ||||||||||||||| | || || | ||| | |||||||||||||| ||| | || Sbjct: 14845014 gagaccatagcggttcatgtggcgcaggagagcctcgccctcaaagatacgtcgggggtt 14844955 Query: 531 cttctcatccagtgtgagcaagtgccttgcancattacggat 572 ||||||||| || ||||||| | ||||||| |||| ||||| Sbjct: 14844954 cttctcatcaagggtgagcagctcccttgcagcattgcggat 14844913 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 12062154 ctgcctgcagggcctccacc 12062173
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 9099 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 9158 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 9159 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 9218 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 9219 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 9278 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 9279 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 9338 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 9339 attgttacggatacggctcaaagcatactg 9368 Score = 291 bits (147), Expect = 1e-75 Identities = 238/270 (88%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 13858 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 13917 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| || ||||||||| |||| ||||||||||| Sbjct: 13918 cttgaagacaagagtctgaagacgccttgcgagaaagttctcaacagtgagggcaaggac 13977 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 13978 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 14037 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 14038 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 14097 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 14098 attgttacggatacggctcaaagcatactg 14127 Score = 176 bits (89), Expect = 5e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||| Sbjct: 12827 cttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggctt 12886 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct: 12887 gtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttg 12946 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 12947 acaatttgcctgccgaccctg 12967 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 8146 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 8205 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 8206 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 8265 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 8266 acaatttgcctgccgaccctg 8286
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 120617 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 120676 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 120677 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 120736 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 120737 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 120796 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 120797 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 120856 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 120857 attgttacggatacggctcaaagcatactg 120886 Score = 291 bits (147), Expect = 1e-75 Identities = 238/270 (88%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 125376 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 125435 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| || ||||||||| |||| ||||||||||| Sbjct: 125436 cttgaagacaagagtctgaagacgccttgcgagaaagttctcaacagtgagggcaaggac 125495 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 125496 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 125555 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 125556 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 125615 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 125616 attgttacggatacggctcaaagcatactg 125645 Score = 176 bits (89), Expect = 5e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||| Sbjct: 124345 cttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggctt 124404 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct: 124405 gtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttg 124464 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 124465 acaatttgcctgccgaccctg 124485 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 119664 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 119723 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 119724 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 119783 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 119784 acaatttgcctgccgaccctg 119804
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 107028 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 106969 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 106968 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 106909 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 106908 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 106849 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||||||||| ||||| ||||||||||||| |||||||||| |||||||| Sbjct: 106848 tgcctcaccctcaaagatgcggcgtggattcttctcatcaagtgtgagcagatgccttgc 106789 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 106788 attgttacggatacggctcaaagcatactg 106759 Score = 182 bits (92), Expect = 9e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 108043 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 107984 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 107983 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 107924 Query: 301 ttgacgatctgcctgccaaccctg 324 ||||| || |||||||| |||||| Sbjct: 107923 ttgacaatttgcctgccgaccctg 107900
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 22332199 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22332140 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 22332139 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 22332080 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 22332079 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 22332020 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 22332019 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 22331960 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 22331959 attgttacggatacggctcaaagcatactg 22331930 Score = 291 bits (147), Expect = 1e-75 Identities = 238/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 22327440 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22327381 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| || ||||||||| |||| ||||||||||| Sbjct: 22327380 cttgaagacaagagtctgaagacgccttgcgagaaagttctcaacagtgagggcaaggac 22327321 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 22327320 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 22327261 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 22327260 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 22327201 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 22327200 attgttacggatacggctcaaagcatactg 22327171 Score = 176 bits (89), Expect = 5e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||| Sbjct: 22328471 cttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggctt 22328412 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct: 22328411 gtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttg 22328352 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 22328351 acaatttgcctgccgaccctg 22328331 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 22333152 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 22333093 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 22333092 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 22333033 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 22333032 acaatttgcctgccgaccctg 22333012 Score = 67.9 bits (34), Expect = 4e-08 Identities = 98/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 242 ttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacat 301 |||| |||||||||||||||||||| | ||| |||||||||| |||||||| |||| Sbjct: 19413080 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 19413139 Query: 302 tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtg 359 ||| || || ||| |||| || |||||| ||||||| ||||||||||| |||||||| Sbjct: 19413140 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 19413196 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 27900597 ctgcctgcagggcctccacc 27900578 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1109048 ctgcctgcagggcctccacc 1109067
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 2969652 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 2969593 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 2969592 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 2969533 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 2969532 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 2969473 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||||||||| ||||| ||||||||||||| |||||||||| |||||||| Sbjct: 2969472 tgcctcaccctcaaagatgcggcgtggattcttctcatcaagtgtgagcagatgccttgc 2969413 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 2969412 attgttacggatacggctcaaagcatactg 2969383 Score = 182 bits (92), Expect = 9e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 181 ccacttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatgga 240 ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| Sbjct: 2970667 ccacttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatggg 2970608 Query: 241 cttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggaca 300 |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 2970607 cttgtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaacgacgggatg 2970548 Query: 301 ttgacgatctgcctgccaaccctg 324 ||||| || |||||||| |||||| Sbjct: 2970547 ttgacaatttgcctgccgaccctg 2970524 Score = 117 bits (59), Expect = 4e-23 Identities = 135/162 (83%) Strand = Plus / Minus Query: 411 aaggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaan 470 ||||||||||||| | || || ||||| |||||||||||||||| |||||||||| ||| Sbjct: 14839608 aaggaagttctcaacggtgagcgcaagcacgtaatcaagcttgttctggccctcaccaag 14839549 Query: 471 gagcccatagcggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngatt 530 ||| ||||||||||||||| | || || | ||| | |||||||||||||| ||| | || Sbjct: 14839548 gagaccatagcggttcatgtggcgcaggagagcctcgccctcaaagatacgtcgggggtt 14839489 Query: 531 cttctcatccagtgtgagcaagtgccttgcancattacggat 572 ||||||||| || ||||||| | ||||||| |||| ||||| Sbjct: 14839488 cttctcatcaagggtgagcagctcccttgcagcattgcggat 14839447 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 12058917 ctgcctgcagggcctccacc 12058936
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 299 bits (151), Expect = 5e-78 Identities = 239/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 22642110 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22642051 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 22642050 cttgaagacaagagtctgaagacgccttgcgaggaagttctcaacagtgagggcaaggac 22641991 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 22641990 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 22641931 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 22641930 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 22641871 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 22641870 attgttacggatacggctcaaagcatactg 22641841 Score = 291 bits (147), Expect = 1e-75 Identities = 238/270 (88%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| Sbjct: 22637351 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22637292 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||||||||||||||| |||||||| || ||||||||| |||| ||||||||||| Sbjct: 22637291 cttgaagacaagagtctgaagacgccttgcgagaaagttctcaacagtgagggcaaggac 22637232 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcgacgaagaan 500 ||||||||||||| ||| || ||||||| ||||||||| ||||||||||| ||||| | Sbjct: 22637231 ataatcaagcttgttctgcccatcagcaaggagcccataacggttcatgcggcgaagcag 22637172 Query: 501 agctgcaccctcaaagatacggcggngattcttctcatccagtgtgagcaagtgccttgc 560 || ||||||| ||||| ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 22637171 tgcctcaccctcgaagatgcggcgtggattcttctcatcaagtgtgagcaggtgccttgc 22637112 Query: 561 ancattacggatcctgctcaatgcatactg 590 | |||||||| | |||||| |||||||| Sbjct: 22637111 attgttacggatacggctcaaagcatactg 22637082 Score = 176 bits (89), Expect = 5e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||| Sbjct: 22638382 cttgccttcttctggttcttccgcttcaccctaccaggggggcctccaccgaatgggctt 22638323 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct: 22638322 gtcagtgagaagtcaatgtgcttctcagactcaaccctcaccatgaatgatgggatgttg 22638263 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 22638262 acaatttgcctgccgaccctg 22638242 Score = 168 bits (85), Expect = 1e-38 Identities = 127/141 (90%) Strand = Plus / Minus Query: 184 cttgccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggactt 243 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| Sbjct: 22643063 cttgccttcttctggttcttcctcttcaccctaccaggggggcctccaccgaatgggctt 22643004 Query: 244 gtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattg 303 |||||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||| Sbjct: 22643003 gtcagtgagaagtcaatgtgtttctcagactcaaccctcaccatgaacgacgggatgttg 22642944 Query: 304 acgatctgcctgccaaccctg 324 || || |||||||| |||||| Sbjct: 22642943 acaatttgcctgccgaccctg 22642923 Score = 67.9 bits (34), Expect = 4e-08 Identities = 98/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 242 ttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacat 301 |||| |||||||||||||||||||| | ||| |||||||||| |||||||| |||| Sbjct: 19572629 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 19572688 Query: 302 tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtg 359 ||| || || ||| |||| || |||||| ||||||| ||||||||||| |||||||| Sbjct: 19572689 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 19572745 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 27924585 ctgcctgcagggcctccacc 27924566 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1106769 ctgcctgcagggcctccacc 1106788
>gb|AY106684.1| Zea mays PCO086432 mRNA sequence Length = 965 Score = 248 bits (125), Expect = 2e-62 Identities = 304/365 (83%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtc 246 ||||||||||||||||||| ||||||||| || ||||| || ||||| | || || || Sbjct: 653 gccttcttctggttcttccgcttcacccttccggcaggaccaccacccagagggctggtg 594 Query: 247 agtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacg 306 || |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| |||||| Sbjct: 593 agggagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacg 534 Query: 307 atctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggac 366 | |||||| || |||||||||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 533 agctgccttcccaccctgatgtggcgctgcctgatcaggacacgagcatggtggatggac 474 Query: 367 tttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagca 426 || ||||||||| ||||||||| | ||||| ||||| | |||||||||||| || Sbjct: 473 ttggccatgccattcttgaagacgatggtctggaggcggcgctggaggaagttctcaaca 414 Query: 427 gtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttc 486 || |||||||| |||||||||||||||| ||| ||||| ||| || ||||| | |||| Sbjct: 413 gtgagggcaagcacgtaatcaagcttgttctgtccctcgccaagaagaccatatctgttc 354 Query: 487 atgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagtgtg 546 |||||||| || | || | ||||||||||||||||| | |||||||||||||| ||| Sbjct: 353 atgcgacggaggagcgcctcgccctcaaagatacggcgtgggttcttctcatccagggtg 294 Query: 547 agcaa 551 ||||| Sbjct: 293 agcaa 289
>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence Length = 969 Score = 238 bits (120), Expect = 2e-59 Identities = 302/364 (82%) Strand = Plus / Plus Query: 187 gccttcttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtc 246 ||||||||||||||||||| ||||||||| || ||||| || ||||| | || || || Sbjct: 362 gccttcttctggttcttccgcttcaccctcccggcaggaccaccacccagagggctggtg 421 Query: 247 agtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacg 306 || |||||||| ||||||||||| ||||| ||||| |||||||| ||||||| |||||| Sbjct: 422 agggagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacg 481 Query: 307 atctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggac 366 | |||||| || |||||||||||||| |||||||||| |||||| ||||||||||||||| Sbjct: 482 agctgccttcccaccctgatgtggcgctgcctgatcaggacacgagcatggtggatggac 541 Query: 367 tttgccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagca 426 || ||||||||| ||||||||| | ||||| ||||| | |||||||||||| || Sbjct: 542 ttggccatgccattcttgaagacgatggtctggaggcggcgctggaggaagttctcaaca 601 Query: 427 gtcagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttc 486 || |||||||| |||||||||||||||| ||| ||||| ||| || ||||| | |||| Sbjct: 602 gtgagggcaagcacgtaatcaagcttgttctgtccctcgccaagaagaccatatctgttc 661 Query: 487 atgcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagtgtg 546 ||||| || || | || | ||||||||||||||||| | |||||||||||||| ||| Sbjct: 662 atgcggcggaggagcgcctcgccctcaaagatacggcgtgggttcttctcatccagggtg 721 Query: 547 agca 550 |||| Sbjct: 722 agca 725
>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence Length = 806 Score = 161 bits (81), Expect = 3e-36 Identities = 264/324 (81%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 |||||||| ||||||||||| || ||||| ||||||||||||||||| | ||||| | Sbjct: 564 gagaagtcgatgtgcttctctgagtcaactctcaccatgaatgagggaatgttgacaagt 505 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||| || ||||||||||||||||| | ||||| || || || |||||||| Sbjct: 504 tgcctcccaactctaatgtggcgttgcctgatgagcacacgagcgtgatgaatggacttc 445 Query: 370 gccatgccagccttgaagacaagagtctgaaggc-gccttgcaaggaagttctcagcagt 428 ||||||||| ||||||||||| ||||||||||| || ||| || ||||||||| | || Sbjct: 444 gccatgccattcttgaagacaatagtctgaaggcggcgctgc-agaaagttctcaacggt 386 Query: 429 cagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || ||||| || || |||||||||| |||||||||| | | || |||||||||||||| Sbjct: 385 gagtgcaagcacatagtcaagcttgttctggccctcaccgagaagaccatagcggttcat 326 Query: 489 gcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagtgtgag 548 ||| || || | || | |||||||||||||| ||| | ||||||||||| || ||||| Sbjct: 325 gcggcgcaggagtgcctcgccctcaaagatacgacgggggttcttctcatcaagggtgag 266 Query: 549 caagtgccttgcancattacggat 572 || | ||||||| |||| ||||| Sbjct: 265 cagctcccttgcagcatttcggat 242
>gb|AY105823.1| Zea mays PCO145462 mRNA sequence Length = 959 Score = 161 bits (81), Expect = 3e-36 Identities = 264/324 (81%), Gaps = 2/324 (0%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 |||||||| ||||||||||| || ||||| ||||||||||||||||| | ||||| | Sbjct: 573 gagaagtcgatgtgcttctctgagtcaactctcaccatgaatgagggaatgttgacaagt 514 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||| || ||||||||||||||||| | ||||| ||||| || |||||||| Sbjct: 513 tgcctcccaactctaatgtggcgttgcctgatgagcacacgagcatgatgaatggacttc 454 Query: 370 gccatgccagccttgaagacaagagtctgaaggc-gccttgcaaggaagttctcagcagt 428 ||||||||| ||||||||||| |||||||||| || ||| || ||||||||| | || Sbjct: 453 gccatgccattcttgaagacaatggtctgaaggcggcgctgc-agaaagttctcaacggt 395 Query: 429 cagggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || ||||| || || |||||||||| |||||||||| | | || |||||||||||||| Sbjct: 394 gagtgcaagcacatagtcaagcttgttctggccctcaccgagaagaccatagcggttcat 335 Query: 489 gcgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagtgtgag 548 ||| || || | || | |||||||||||||| ||| | ||||||||||| || ||||| Sbjct: 334 gcggcgcaggagtgcctcgccctcaaagatacgacgggggttcttctcatcaagggtgag 275 Query: 549 caagtgccttgcancattacggat 572 || | ||||||| |||| ||||| Sbjct: 274 cagctcccttgcagcatttcggat 251
>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene) Length = 939 Score = 145 bits (73), Expect = 2e-31 Identities = 219/268 (81%) Strand = Plus / Minus Query: 198 gttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtgagaagtc 257 |||||| |||||||| ||||| | | | || |||||||| |||||||| | ||||||||| Sbjct: 626 gttctttctcttcactctgccaggacgaccaccaccgaagggacttgtaattgagaagtc 567 Query: 258 aatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgcctgcc 317 ||||||||||| ||| ||||| || |||||||| || || |||||||| | |||| | || Sbjct: 566 aatgtgcttctgagagtcaactctaaccatgaaggaaggaacattgacaacctgctttcc 507 Query: 318 aaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgcc 377 |||||| ||||| | |||||| || | || | |||||||||||| ||||||||||| || Sbjct: 506 aacccttatgtgcctttgcctaatgagcactctggcatggtggattgactttgccatccc 447 Query: 378 agccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaag 437 || |||||| ||||| || |||||||| | ||||||||||||| ||||||| || | Sbjct: 446 agacttgaaaacaagggtttgaaggcggcgctcaaggaagttctctacagtcagagccaa 387 Query: 438 gacgtaatcaagcttgtnctggccctca 465 ||| |||||||| |||| ||||||||| Sbjct: 386 gacataatcaagtttgttttggccctca 359
>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence Length = 963 Score = 131 bits (66), Expect = 3e-27 Identities = 215/265 (81%) Strand = Plus / Minus Query: 196 tggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtgagaag 255 |||||||| | |||||| || |||| | | || ||||| || ||||| || || ||||| Sbjct: 614 tggttctttcgcttcactcttcctggacgcccaccaccaaaaggactggttagagagaaa 555 Query: 256 tcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgcctg 315 ||||||||||||| ||| || || |||||||||||||| | ||||| |||| ||||| Sbjct: 554 tcaatgtgcttctgagagtcgactctcaccatgaatgaagcaacattcacgacttgcctt 495 Query: 316 ccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatg 375 |||||||||||||| | ||||||||| | || | ||||||||||| ||||| |||||| Sbjct: 494 ccaaccctgatgtgcctttgcctgatgagcactctcgcatggtggattgacttggccatg 435 Query: 376 ccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggca 435 |||| |||||||||||| || || || || | | | |||||||||||| |||| || || Sbjct: 434 ccagtcttgaagacaagtgtttgcagacgacgttcgaggaagttctcaacagtgagtgcc 375 Query: 436 aggacgtaatcaagcttgtnctggc 460 | ||||||||||||||||| ||||| Sbjct: 374 aagacgtaatcaagcttgttctggc 350
>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full insert sequence Length = 989 Score = 127 bits (64), Expect = 4e-26 Identities = 258/323 (79%), Gaps = 1/323 (0%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 |||||||| ||||||||||| || ||| |||||||||||| |||||| ||||| | | Sbjct: 575 gagaagtcgatgtgcttctctaat-caagtctcaccatgaataaggggatgttgacaagc 517 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| || || ||||||||| |||||||||| | ||| | |||| || ||||| || Sbjct: 516 tgccttcccactctgatgtggtgttgcctgatgagtacatgatcatgatgaatggatttc 457 Query: 370 gccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtc 429 || |||| ||||||||||| ||||| ||||| | ||||||||||||| | || Sbjct: 456 accgtgccgttcttgaagacaatggtctggaggcggcactgaaggaagttctcaacggtg 397 Query: 430 agggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatg 489 || ||||| |||||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 396 agcgcaagcacgtaatcaagcttgttctggccctcaccaaggagaccatagcggttcatg 337 Query: 490 cgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatccagtgtgagc 549 | || || | ||| | |||||||||||||| ||| | ||||||||||| || |||||| Sbjct: 336 tggcgcaggagagcctcgccctcaaagatacgtcgggggttcttctcatcaagggtgagc 277 Query: 550 aagtgccttgcancattacggat 572 | | ||||||| |||| ||||| Sbjct: 276 agctcccttgcagcattgcggat 254
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 117 bits (59), Expect = 4e-23 Identities = 135/162 (83%) Strand = Plus / Plus Query: 411 aaggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctcagcaan 470 ||||||||||||| | || || ||||| |||||||||||||||| |||||||||| ||| Sbjct: 87694 aaggaagttctcaacggtgagcgcaagcacgtaatcaagcttgttctggccctcaccaag 87753 Query: 471 gagcccatagcggttcatgcgacgaagaanagctgcaccctcaaagatacggcggngatt 530 ||| ||||||||||||||| | || || | ||| | |||||||||||||| ||| | || Sbjct: 87754 gagaccatagcggttcatgtggcgcaggagagcctcgccctcaaagatacgtcgggggtt 87813 Query: 531 cttctcatccagtgtgagcaagtgccttgcancattacggat 572 ||||||||| || ||||||| | ||||||| |||| ||||| Sbjct: 87814 cttctcatcaagggtgagcagctcccttgcagcattgcggat 87855
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 107 bits (54), Expect = 4e-20 Identities = 183/226 (80%) Strand = Plus / Plus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatg 288 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| |||||| Sbjct: 16949 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 17008 Query: 289 aatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagaca 348 || || |||| || || | |||||| |||||||||||||| | |||||||| | || Sbjct: 17009 aaggatgggatgttcacaacctgcctcccaaccctgatgtgcctctgcctgattagaacc 17068 Query: 349 cgggcatggtggatggactttgccatgccagccttgaagacaagagtctgaaggcgcctt 408 | ||||| || || ||||| |||||||||| ||||| |||||||||||||| || | | Sbjct: 17069 ctagcatgatgaatagacttagccatgccagatttgaacacaagagtctgaagacgacgt 17128 Query: 409 gcaaggaagttctcagcagtcagggcaaggacgtaatcaagcttgt 454 |||| || |||||| |||| || || | || ||||||||||||| Sbjct: 17129 tcaagaaaattctcaacagtgagagccaacacataatcaagcttgt 17174 Score = 50.1 bits (25), Expect = 0.008 Identities = 36/40 (90%) Strand = Plus / Plus Query: 506 caccctcaaagatacggcggngattcttctcatccagtgt 545 ||||||||||||| || || ||||||||||||||||||| Sbjct: 17226 caccctcaaagatccgacgaggattcttctcatccagtgt 17265
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 97.6 bits (49), Expect = 4e-17 Identities = 140/171 (81%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 |||||||||| | |||||||| | |||||| ||||||||||| ||||| ||||||||| Sbjct: 25984680 cctgatgtggtgctgcctgataaggacacgtgcatggtggattgacttggccatgccatt 25984739 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||| | |||| ||||| | |||||||||||| |||| || ||||| || Sbjct: 25984740 cttgaagacgatggtctagaggcggcgctagaggaagttctcaacagtgagtgcaagcac 25984799 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcg 491 |||||||||||||| ||| ||||| ||| ||| ||||||| ||||||||| Sbjct: 25984800 gtaatcaagcttgttctgaccctcgccaaggagaccatagcagttcatgcg 25984850 Score = 60.0 bits (30), Expect = 9e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||||||||||||||||||| || | ||||||| || || | || || || || || Sbjct: 25982939 cttctggttcttcctcttcactcttacagcagggctgccgcccagcgggctggtgaggga 25982998 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||| | |||||||||||||| |||| |||||| |||||||| || | ||||||| ||| Sbjct: 25982999 gaaggcgatgtgcttctcagactcaagcctcacaatgaatgatggaatgttgacgagctg 25983058 Query: 312 cctgccaaccctga 325 ||| || ||||||| Sbjct: 25983059 ccttcccaccctga 25983072 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 24973403 ctgcctgcagggcctccacc 24973384 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 24271765 ctgcctgcagggcctccacc 24271746 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 19661456 ctgcctgcagggcctccacc 19661437
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 97.6 bits (49), Expect = 4e-17 Identities = 140/171 (81%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 |||||||||| | |||||||| | |||||| ||||||||||| ||||| ||||||||| Sbjct: 61692 cctgatgtggtgctgcctgataaggacacgtgcatggtggattgacttggccatgccatt 61751 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||| | |||| ||||| | |||||||||||| |||| || ||||| || Sbjct: 61752 cttgaagacgatggtctagaggcggcgctagaggaagttctcaacagtgagtgcaagcac 61811 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcg 491 |||||||||||||| ||| ||||| ||| ||| ||||||| ||||||||| Sbjct: 61812 gtaatcaagcttgttctgaccctcgccaaggagaccatagcagttcatgcg 61862 Score = 60.0 bits (30), Expect = 9e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||||||||||||||||||| || | ||||||| || || | || || || || || Sbjct: 59951 cttctggttcttcctcttcactcttacagcagggctgccgcccagcgggctggtgaggga 60010 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||| | |||||||||||||| |||| |||||| |||||||| || | ||||||| ||| Sbjct: 60011 gaaggcgatgtgcttctcagactcaagcctcacaatgaatgatggaatgttgacgagctg 60070 Query: 312 cctgccaaccctga 325 ||| || ||||||| Sbjct: 60071 ccttcccaccctga 60084
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 97.6 bits (49), Expect = 4e-17 Identities = 140/171 (81%) Strand = Plus / Plus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatgccagc 380 |||||||||| | |||||||| | |||||| ||||||||||| ||||| ||||||||| Sbjct: 18242 cctgatgtggtgctgcctgataaggacacgtgcatggtggattgacttggccatgccatt 18301 Query: 381 cttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggcaaggac 440 ||||||||| | |||| ||||| | |||||||||||| |||| || ||||| || Sbjct: 18302 cttgaagacgatggtctagaggcggcgctagaggaagttctcaacagtgagtgcaagcac 18361 Query: 441 gtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatgcg 491 |||||||||||||| ||| ||||| ||| ||| ||||||| ||||||||| Sbjct: 18362 gtaatcaagcttgttctgaccctcgccaaggagaccatagcagttcatgcg 18412 Score = 60.0 bits (30), Expect = 9e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||||||||||||||||||| || | ||||||| || || | || || || || || Sbjct: 16501 cttctggttcttcctcttcactcttacagcagggctgccgcccagcgggctggtgaggga 16560 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||| | |||||||||||||| |||| |||||| |||||||| || | ||||||| ||| Sbjct: 16561 gaaggcgatgtgcttctcagactcaagcctcacaatgaatgatggaatgttgacgagctg 16620 Query: 312 cctgccaaccctga 325 ||| || ||||||| Sbjct: 16621 ccttcccaccctga 16634
>ref|NM_121524.3| Arabidopsis thaliana structural constituent of ribosome AT5G15200 mRNA, complete cds Length = 885 Score = 85.7 bits (43), Expect = 2e-13 Identities = 233/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 587 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 528 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 527 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 468 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 467 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 408 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 407 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 348 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 347 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 291
>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA Length = 875 Score = 85.7 bits (43), Expect = 2e-13 Identities = 213/270 (78%) Strand = Plus / Minus Query: 196 tggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtgagaag 255 |||||||| | |||||| || |||| | | || ||||| || ||||| || || |||||| Sbjct: 608 tggttctttcgcttcactcttcctggacgaccgccaccaaaaggactggttagagagaag 549 Query: 256 tcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgcctg 315 ||||||||||||| ||| || || |||||||||||||| | ||||| || | ||||| Sbjct: 548 tcaatgtgcttctgagagtccactctcaccatgaatgaagcaacattcaccacttgcctt 489 Query: 316 ccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgccatg 375 ||||||||||| || | ||||||||| | || | || ||||| || ||||| |||||| Sbjct: 488 ccaaccctgatatgcctttgcctgatgagcactcttgcgtggtgaattgacttggccatg 429 Query: 376 ccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagggca 435 |||| |||||| ||||| || || || || | | ||||||||||||| |||| || || Sbjct: 428 ccagtcttgaacacaagggtttgcagacgacgttcaaggaagttctcgacagtgagtgcc 369 Query: 436 aggacgtaatcaagcttgtnctggccctca 465 | ||| ||||| ||||||| ||||| |||| Sbjct: 368 aagacataatcgagcttgttctggctctca 339
>gb|BT011315.1| Arabidopsis thaliana At5g15200 gene, complete cds Length = 597 Score = 85.7 bits (43), Expect = 2e-13 Identities = 233/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 540 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 481 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 480 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 421 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 420 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 361 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 360 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 301 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 300 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 244
>gb|BT010847.1| Arabidopsis thaliana At5g15200 mRNA, complete cds Length = 745 Score = 85.7 bits (43), Expect = 2e-13 Identities = 233/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 566 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 507 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 506 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 447 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 446 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 387 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 386 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 327 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 326 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 270
>emb|BX829457.1|CNS0A1LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 551 Score = 85.7 bits (43), Expect = 2e-13 Identities = 233/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 328 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 269 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 268 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 209 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 208 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 149 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 148 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 89 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 88 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 32
>emb|BX829588.1|CNS0A17H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 85.7 bits (43), Expect = 2e-13 Identities = 233/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 580 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 521 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 520 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 461 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 460 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 401 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 400 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 341 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 340 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 284
>ref|NM_123348.1| Arabidopsis thaliana structural constituent of ribosome AT5G39850 mRNA, complete cds Length = 879 Score = 83.8 bits (42), Expect = 6e-13 Identities = 182/230 (79%) Strand = Plus / Minus Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||||||||| || | ||| | ||| | |||||| || ||||| |||||||| Sbjct: 453 tgcctcccaaccctgatatgcctttgtcggataaggacacgagcgtggtgaatggactta 394 Query: 370 gccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtc 429 ||||| |||| ||| ||||||| ||| || || || | | ||||||| |||||| ||||| Sbjct: 393 gccataccagacttaaagacaatagtttggagacgacgttcaaggaaattctcaacagtc 334 Query: 430 agggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatg 489 | ||||| || ||||||||||||| |||| ||| ||| || ||||| || ||||| Sbjct: 333 aaagcaagaacataatcaagcttgttctgggtttcatcaagaagaccatatcgattcatt 274 Query: 490 cgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatc 539 | | ||||| |||| |||| ||||||||||| || ||||||||||||| Sbjct: 273 ctcctaagaagagcttcaccttcaaagatacgacgaggattcttctcatc 224
>gb|BT024915.1| Arabidopsis thaliana At5g39850 mRNA, complete cds Length = 594 Score = 83.8 bits (42), Expect = 6e-13 Identities = 182/230 (79%) Strand = Plus / Minus Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||||||||| || | ||| | ||| | |||||| || ||||| |||||||| Sbjct: 422 tgcctcccaaccctgatatgcctttgtcggataaggacacgagcgtggtgaatggactta 363 Query: 370 gccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtc 429 ||||| |||| ||| ||||||| ||| || || || | | ||||||| |||||| ||||| Sbjct: 362 gccataccagacttaaagacaatagtttggagacgacgttcaaggaaattctcaacagtc 303 Query: 430 agggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatg 489 | ||||| || ||||||||||||| |||| ||| ||| || ||||| || ||||| Sbjct: 302 aaagcaagaacataatcaagcttgttctgggtttcatcaagaagaccatatcgattcatt 243 Query: 490 cgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatc 539 | | ||||| |||| |||| ||||||||||| || ||||||||||||| Sbjct: 242 ctcctaagaagagcttcaccttcaaagatacgacgaggattcttctcatc 193
>gb|AY088109.1| Arabidopsis thaliana clone 41408 mRNA, complete sequence Length = 880 Score = 83.8 bits (42), Expect = 6e-13 Identities = 182/230 (79%) Strand = Plus / Minus Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||||||||| || | ||| | ||| | |||||| || ||||| |||||||| Sbjct: 453 tgcctcccaaccctgatatgcctttgtcggataaggacacgagcgtggtgaatggactta 394 Query: 370 gccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtc 429 ||||| |||| ||| ||||||| ||| || || || | | ||||||| |||||| ||||| Sbjct: 393 gccataccagacttaaagacaatagtttggagacgacgttcaaggaaattctcaacagtc 334 Query: 430 agggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcatg 489 | ||||| || ||||||||||||| |||| ||| ||| || ||||| || ||||| Sbjct: 333 aaagcaagaacataatcaagcttgttctgggtttcatcaagaagaccatatcgattcatt 274 Query: 490 cgacgaagaanagctgcaccctcaaagatacggcggngattcttctcatc 539 | | ||||| |||| |||| ||||||||||| || ||||||||||||| Sbjct: 273 ctcctaagaagagcttcaccttcaaagatacgacgaggattcttctcatc 224
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatg 288 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| |||||| Sbjct: 104687 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 104746 Query: 289 aatgaggggacattgacgatctgcctgccaaccct 323 || || |||| || || | |||||| |||||||| Sbjct: 104747 aaggatgggatgttcacaacctgcctcccaaccct 104781 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 232 ccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaat 291 ||||| |||||||| ||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 100055 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 99996 Query: 292 gaggggacattgacgatctgcctgccaaccct 323 || |||| || || | |||||| |||||||| Sbjct: 99995 gatgggatgttcaccacctgcctcccaaccct 99964 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 352 gcatggtggatggactttgccatgccagccttgaagacaagagtctgaag 401 |||||||| || ||||| |||||||||| ||||| |||||||||||||| Sbjct: 105721 gcatggtgaatagacttagccatgccagatttgaacacaagagtctgaag 105770 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 gactttgccatgccagccttgaagacaagagtctgaag 401 ||||| |||||||||| ||||| |||||||||||||| Sbjct: 99157 gacttagccatgccagatttgaacacaagagtctgaag 99120
>emb|BX829696.1|CNS0A1GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 876 Score = 77.8 bits (39), Expect = 4e-11 Identities = 232/297 (78%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| | ||| || || | Sbjct: 580 cttctcgttccttctcttcactcttcctggacggccaccaccgaaggcactggtgagggc 521 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||||||||||||| || |||| |||||||||||||| || | || || | || Sbjct: 520 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattg 461 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgc 371 | | ||||||||||| || | |||||||| | |||||| | || ||||| ||||| || Sbjct: 460 ctttccaaccctgatatgcctctgcctgatgaggacacgagagtgatggatagacttagc 401 Query: 372 catgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcag 431 ||| |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 400 cataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaa 341 Query: 432 ggcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 340 agccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 284
>dbj|AB010077.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH19 Length = 77380 Score = 77.8 bits (39), Expect = 4e-11 Identities = 155/195 (79%) Strand = Plus / Minus Query: 345 gacacgggcatggtggatggactttgccatgccagccttgaagacaagagtctgaaggcg 404 |||||| || ||||| |||||||| ||||| |||| ||| ||||||| ||| || || || Sbjct: 3349 gacacgagcgtggtgaatggacttagccataccagacttaaagacaatagtttggagacg 3290 Query: 405 ccttgcaaggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctc 464 | | ||||||| |||||| |||||| ||||| || ||||||||||||| |||| || Sbjct: 3289 acgttcaaggaaattctcaacagtcaaagcaagaacataatcaagcttgttctgggtttc 3230 Query: 465 agcaangagcccatagcggttcatgcgacgaagaanagctgcaccctcaaagatacggcg 524 | ||| || ||||| || ||||| | | ||||| |||| |||| ||||||||||| || Sbjct: 3229 atcaagaagaccatatcgattcattctcctaagaagagcttcaccttcaaagatacgacg 3170 Query: 525 gngattcttctcatc 539 ||||||||||||| Sbjct: 3169 aggattcttctcatc 3155
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatg 288 ||||||||||||||||| ||||| |||||||||||||||| || |||||||| |||||| Sbjct: 54946 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 54887 Query: 289 aa 290 || Sbjct: 54886 aa 54885 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 232 ccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaat 291 ||||| |||||||| ||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 62174 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 62233 Query: 292 gaggggacattgacgatctgcctgccaaccct 323 || |||| || || | |||||| |||||||| Sbjct: 62234 gatgggatgttcaccacctgcctcccaaccct 62265 Score = 50.1 bits (25), Expect = 0.008 Identities = 36/40 (90%) Strand = Plus / Minus Query: 506 caccctcaaagatacggcggngattcttctcatccagtgt 545 ||||||||||||| || || ||||||||||||||||||| Sbjct: 54012 caccctcaaagatccgacgaggattcttctcatccagtgt 53973
>dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963 Length = 800 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 283 accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 342 |||||||| ||||| || ||||| |||||| |||| || | ||||||||| ||| ||||| Sbjct: 491 accatgaaggagggaacgttgacaatctgcttgccgacgcggatgtggcgctgcttgatc 432 Query: 343 aagacacgggcatggtggatggactt 368 | ||||||||| |||||||||||||| Sbjct: 431 aggacacgggcgtggtggatggactt 406
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 283 accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 342 |||||||| ||||| || ||||| |||||| |||| || | ||||||||| ||| ||||| Sbjct: 742428 accatgaaggagggaacgttgacaatctgcttgccgacgcggatgtggcgctgcttgatc 742487 Query: 343 aagacacgggcatggtggatggactt 368 | ||||||||| |||||||||||||| Sbjct: 742488 aggacacgggcgtggtggatggactt 742513
>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence Length = 673 Score = 73.8 bits (37), Expect = 6e-10 Identities = 171/216 (79%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 ||||||||||||||||||| || || | |||||||| || || || ||||| || | | Sbjct: 369 gagaagtcaatgtgcttctgggagtccagtctcaccataaaagaaggaacattcaccacc 310 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||||| ||||| ||||| || | |||||| || | || | ||||||||||| ||||| Sbjct: 309 tgcctaccaactctgatatgcctttgcctaattagtactctagcatggtggattgactta 250 Query: 370 gccatgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtc 429 |||||||||| ||||||||||||||| ||||| || | | |||| || ||||| |||| Sbjct: 249 gccatgccagtcttgaagacaagagtttgaagacgacgttcaagaaaattctccacagtg 190 Query: 430 agggcaaggacgtaatcaagcttgtnctggccctca 465 || | | ||||||||| ||||||| ||||| |||| Sbjct: 189 agagacaagacgtaatcgagcttgttctggctctca 154
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence Length = 129327 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 232 ccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaat 291 ||||| |||||||| ||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 55630 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 55571 Query: 292 gaggggacattgacgatctgcctgccaaccct 323 || |||| || || | |||||| |||||||| Sbjct: 55570 gatgggatgttcaccacctgcctcccaaccct 55539 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatg 288 ||||| || |||||||| || || |||||||||||||||| || ||||||||||||||| Sbjct: 53183 ccaccaaagggacttgtgagggaaaagtcaatgtgcttctgtgaatcaaccctcaccatg 53124 Query: 289 aatgaggggacattgacgatctgcctgccaaccctg 324 || || |||| || || | |||||| ||||||||| Sbjct: 53123 aaggatgggatgttaacaacctgcctcccaaccctg 53088
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 67.9 bits (34), Expect = 4e-08 Identities = 98/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 242 ttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacat 301 |||| |||||||||||||||||||| | ||| |||||||||| |||||||| |||| Sbjct: 131631 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 131690 Query: 302 tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtg 359 ||| || || ||| |||| || |||||| ||||||| ||||||||||| |||||||| Sbjct: 131691 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 131747
>emb|BX830539.1|CNS0A1E8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 67.9 bits (34), Expect = 4e-08 Identities = 185/236 (78%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgc 312 |||||||||||||||| || |||| |||||||||||||| || | || || | ||| Sbjct: 355 aagtcaatgtgcttctgtgaatcaagtctcaccatgaatgatggaatgttcaccaattgc 296 Query: 313 ctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcc 372 | |||||||||| || | |||||||| | |||||| | || ||||| ||||| ||| Sbjct: 295 tttccaaccctgagatgcctctgcctgatgaggacacgagagtgatggatagacttagcc 236 Query: 373 atgccagccttgaagacaagagtctgaaggcgccttgcaaggaagttctcagcagtcagg 432 || |||| |||||| |||| ||||||||| || | |||| ||||||||| |||||| Sbjct: 235 ataccagacttgaacacaatagtctgaagacgacgctcaagaaagttctcaacagtcaaa 176 Query: 433 gcaaggacgtaatcaagcttgtnctggccctcagcaangagcccatagcggttcat 488 || | ||||||||| ||||||| ||||| |||| ||| ||||| || |||||||| Sbjct: 175 gccaagacgtaatcgagcttgttctggctctcatcaagaagcccgtaacggttcat 120
>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence Length = 891 Score = 61.9 bits (31), Expect = 2e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 352 gcatggtggatggactttgccatgccagccttgaagacaagagtctgaaggcgccttgca 411 ||||||||||| ||||| |||||||||| ||||||||| || || || || || | || Sbjct: 443 gcatggtggattgacttagccatgccagtcttgaagacgagggtttggagacgacgctca 384 Query: 412 aggaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctca 465 || |||||||| |||| ||||| | ||| ||||||||||||| ||||| |||| Sbjct: 383 agaaagttctccacagtgagggccaagacataatcaagcttgttctggctctca 330 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatg 288 |||||||| ||||| || || ||||||||||||||||||| || || || ||||||||| Sbjct: 566 ccaccgaaaggactggtgagagagaagtcaatgtgcttctgggagtccactctcaccatg 507 Query: 289 aa 290 || Sbjct: 506 aa 505
>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete sequence Length = 136150 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 196 tggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtgagaag 255 |||||||| | |||||| || |||| | | || ||||| || ||||| || || |||||| Sbjct: 121325 tggttctttcgcttcactcttcctggacgcccgccaccaaaaggactggttagagagaag 121266 Query: 256 tcaatgtgcttctcagattcaaccctcaccatgaatga 293 ||||||||||||| ||| || || |||||||||||||| Sbjct: 121265 tcaatgtgcttctgagagtccactctcaccatgaatga 121228 Score = 56.0 bits (28), Expect = 1e-04 Identities = 90/111 (81%) Strand = Plus / Minus Query: 355 tggtggatggactttgccatgccagccttgaagacaagagtctgaaggcgccttgcaagg 414 ||||| || ||||| |||||||||| |||||| ||||| || || || || | | ||||| Sbjct: 120206 tggtgaattgacttagccatgccagtcttgaacacaagggtttgcagacgacgttcaagg 120147 Query: 415 aagttctcagcagtcagggcaaggacgtaatcaagcttgtnctggccctca 465 ||||||||| |||| || || | ||| ||||| ||||||| ||||| |||| Sbjct: 120146 aagttctcaacagtgagtgccaagacataatcgagcttgttctggctctca 120096
>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2), mRNA Length = 582 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 283 accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 342 |||||| | ||||| || ||||| |||||| |||| || | |||||| || ||| ||||| Sbjct: 443 accatgtaggagggaacgttgacaatctgcttgccgacacggatgtgacgctgcttgatc 384 Query: 343 aagacacgggcatggtggatggactt 368 | ||||||||| |||||||||||||| Sbjct: 383 aggacacgggcgtggtggatggactt 358
>ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02952.4) partial mRNA Length = 576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 292 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 351 |||||||| |||||||||||| |||| || | ||||||||| || | || | ||||||| Sbjct: 428 gaggggacgttgacgatctgcttgccgacgcggatgtggcgctggcgaatgaggacacgg 369 Query: 352 gcatggtggatggactt 368 || |||||||||||||| Sbjct: 368 gcgtggtggatggactt 352
>ref|XM_479224.1| Oryza sativa (japonica cultivar-group), mRNA Length = 216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||||||||||||||||||| || | ||||||| || || | || || || || || Sbjct: 138 cttctggttcttcctcttcactcttacagcagggctgccgcccagcgggctggtgaggga 79 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||| | |||||||||||||| |||| |||||| |||||||| || | ||||||| ||| Sbjct: 78 gaaggcgatgtgcttctcagactcaagcctcacaatgaatgatggaatgttgacgagctg 19 Query: 312 cctgccaaccct 323 ||| || ||||| Sbjct: 18 ccttcccaccct 7
>gb|AY193430.1| Lactuca saligna genotype PI491204 40S ribosomal protein S9 gene, partial cds Length = 459 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>gb|AY193429.1| Lactuca saligna genotype CGN9311 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>gb|AY193428.1| Lactuca saligna genotype US93UC10 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>gb|AY193427.1| Lactuca serriola genotype W66336A 40S ribosomal protein S9 gene, partial cds Length = 520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgagtccaccctcaccatgaa 139
>gb|AY193426.1| Lactuca sativa cultivar Mariska 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>gb|AY193425.1| Lactuca sativa cultivar Calmar 40S ribosomal protein S9 gene, partial cds Length = 519 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>gb|AY193424.1| Lactuca sativa cultivar Diana 40S ribosomal protein S9 gene, partial cds Length = 516 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 235 aatggacttgtcagtgagaagtcaatgtgcttctcagattcaaccctcaccatgaa 290 |||||||| || |||||||| ||||||||||||| || || |||||||||||||| Sbjct: 84 aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139
>ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S9 (LOC476387), mRNA Length = 696 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 319 accctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||| ||||| || | ||||| ||||||||||||||||||||||| |||| Sbjct: 439 accctgatatggcgctggcggatcagcacacgggcatggtggatggacttggcca 385
>gb|AY389659.1| Hyacinthus orientalis 40S ribosomal protein S9 (RPS9) mRNA, complete cds Length = 800 Score = 52.0 bits (26), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 414 gaagttctcagcagtcagggcaaggacgtaatcaagcttgtnctg 458 ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 353 gaagttctctacagtcaatgcaaggacgtaatcaagcttgttctg 309
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 39093 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 39152 Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatga 293 |||||||||||||||| || |||| |||||||||||||| Sbjct: 39153 aaagtcaatgtgcttctgtgaatcaagtctcaccatgaatga 39194
>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds Length = 686 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 226 cctccaccgaatggacttgtcagtgagaagtcaatgtgctt 266 ||||||||||||||| | |||| ||||||||||||||||| Sbjct: 560 cctccaccgaatggagatttcagagagaagtcaatgtgctt 520 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 351 ggcatggtggatggactttgccatgccagccttgaa 386 |||||| ||||||||||| |||| |||||| ||||| Sbjct: 435 ggcatgatggatggacttcgccaggccagctttgaa 400
>ref|XM_959140.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial mRNA Length = 573 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 292 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 351 ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| Sbjct: 428 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 369 Query: 352 gcatggtggatggactt 368 || |||||||||||||| Sbjct: 368 gcgtggtggatggactt 352
>ref|XM_329138.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial mRNA Length = 573 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 292 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 351 ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| Sbjct: 428 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 369 Query: 352 gcatggtggatggactt 368 || |||||||||||||| Sbjct: 368 gcgtggtggatggactt 352
>ref|XM_455020.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23749g predicted mRNA Length = 741 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgat 308 |||||||||||||||||||||||| | || |||||||| || |||| |||||||| Sbjct: 100 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 156
>ref|XM_455021.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23760g predicted mRNA Length = 567 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgat 308 |||||||||||||||||||||||| | || |||||||| || |||| |||||||| Sbjct: 474 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 418
>ref|XM_749816.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S9 (Afu3g06970) partial mRNA Length = 714 Score = 50.1 bits (25), Expect = 0.008 Identities = 94/117 (80%) Strand = Plus / Minus Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctg 311 |||||| |||||||||| ||| |||| | |||||| | || || || ||||||||||| Sbjct: 606 gaagtcgatgtgcttctgagagtcaaggcgaaccatgtaggaaggcacgttgacgatctg 547 Query: 312 cctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggactt 368 | |||| || | |||||| || ||| |||||| |||||| || ||||| |||||||| Sbjct: 546 cttgccgacacggatgtgacgctgcttgatcaggacacgagcgtggtgaatggactt 490
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 252 gaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgat 308 |||||||||||||||||||||||| | || |||||||| || |||| |||||||| Sbjct: 2103822 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 2103878
>gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interval sequence Length = 33499 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 292 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 351 ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| Sbjct: 26106 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 26047 Query: 352 gcatggtggatggactt 368 || |||||||||||||| Sbjct: 26046 gcgtggtggatggactt 26030
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgc 312 ||||||||||||||||| || || | ||||||||||| || ||||| ||||| |||||| Sbjct: 162821 aagtcaatgtgcttctcggagtccaatctcaccatgaaggatgggacgttgacaatctgc 162762 Query: 313 ctgcc 317 |||| Sbjct: 162761 ttgcc 162757
>ref|NM_209959.1| Eremothecium gossypii AEL255Wp (AEL255W), mRNA Length = 567 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatctgc 312 ||||||||||||||||| || || | ||||||||||| || ||||| ||||| |||||| Sbjct: 473 aagtcaatgtgcttctcggagtccaatctcaccatgaaggatgggacgttgacaatctgc 414 Query: 313 ctgcc 317 |||| Sbjct: 413 ttgcc 409
>gb|BC076696.1| Xenopus tropicalis ribosomal protein S9, mRNA (cDNA clone MGC:79756 IMAGE:6984164), complete cds Length = 780 Score = 48.1 bits (24), Expect = 0.033 Identities = 99/124 (79%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 |||||||| |||||||||| ||| || | | ||| |||||||| |||| || || | | Sbjct: 507 gagaagtcgatgtgcttctgagagtccagacgcacaatgaatgatgggatgttaaccacc 448 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||| ||| ||| | |||||| | ||| ||||||| || |||||||| |||||||||||| Sbjct: 447 tgcttgcgaacacggatgtgcctttgtctgatcagcacgcgggcatgatggatggacttt 388 Query: 370 gcca 373 |||| Sbjct: 387 gcca 384
>ref|NM_001006812.1| Xenopus tropicalis ribosomal protein S9 (rps9), mRNA Length = 780 Score = 48.1 bits (24), Expect = 0.033 Identities = 99/124 (79%) Strand = Plus / Minus Query: 250 gagaagtcaatgtgcttctcagattcaaccctcaccatgaatgaggggacattgacgatc 309 |||||||| |||||||||| ||| || | | ||| |||||||| |||| || || | | Sbjct: 507 gagaagtcgatgtgcttctgagagtccagacgcacaatgaatgatgggatgttaaccacc 448 Query: 310 tgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtggatggacttt 369 ||| ||| ||| | |||||| | ||| ||||||| || |||||||| |||||||||||| Sbjct: 447 tgcttgcgaacacggatgtgcctttgtctgatcagcacgcgggcatgatggatggacttt 388 Query: 370 gcca 373 |||| Sbjct: 387 gcca 384
>emb|X96613.1|PASU12 P.anserina su12 gene Length = 1379 Score = 48.1 bits (24), Expect = 0.033 Identities = 84/104 (80%) Strand = Plus / Minus Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatggtgg 360 |||||||||||| |||| || | |||||| || || | ||| | |||||| || |||||| Sbjct: 1025 ttgacgatctgcttgccgacacggatgtgacgctggcggataaggacacgagcgtggtgg 966 Query: 361 atggactttgccatgccagccttgaagacaagagtctgaaggcg 404 |||||||| |||| ||| |||| |||| |||||||| ||||| Sbjct: 965 atggacttggccaggccgagcttgtagacgagagtctggaggcg 922
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 319 accctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||||||||| || | ||| | |||||||| |||||||||||||| |||| Sbjct: 702 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggcca 648
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 319 accctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||||||||| || | ||| | |||||||| |||||||||||||| |||| Sbjct: 522 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggcca 468
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 319 accctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||||||||| || | ||| | |||||||| |||||||||||||| |||| Sbjct: 494 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggcca 440
>gb|AY221154.1| Volvariella volvacea clone Cor4 cold-induced gene mRNA, partial sequence Length = 618 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 295 gggacattgacgatctgcctgccaaccctgatgtggcgttgcctgat 341 ||||||||||| || ||| ||||||| | |||||| ||||||||||| Sbjct: 529 gggacattgacaatttgcttgccaacacggatgtgtcgttgcctgat 483
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 151 tcttcctcatcaccaccagcgtcgccgccaccac 184 ||||| |||||||||||| | ||||||||||||| Sbjct: 91879 tcttcatcatcaccaccatcatcgccgccaccac 91912
>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete sequence Length = 180316 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 ctagttcctcattcctcttcctcatc 161 ||||||||||||||||||||| |||| Sbjct: 16622 ctagttcctcattcctcttccccatc 16647
>emb|CR760722.2| Xenopus tropicalis finished cDNA, clone TGas113k07 Length = 683 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Minus Query: 324 gatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||| | ||| ||||||| || |||||||| |||||||||||||||| Sbjct: 410 gatgtgcctttgtctgatcagcacgcgggcatgatggatggactttgcca 361
>gb|DQ332190.1| Synthetic construct Saccharomyces cerevisiae clone FLH201304.01X RPS9A gene, complete sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgagggga 298 |||||||||||||||||||| || | || |||||||| ||||||| Sbjct: 974 aagtcaatgtgcttctcagagtccaatctgaccatgaaagagggga 929
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgagggga 298 |||||||||||||||||||| || | || |||||||| ||||||| Sbjct: 18907 aagtcaatgtgcttctcagagtccaatctgaccatgaaagagggga 18862
>dbj|AP004508.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036c, complete sequence Length = 22758 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 159 atcaccaccagcgtcgccgccaccac 184 |||||||||| ||||||||||||||| Sbjct: 142 atcaccaccaccgtcgccgccaccac 117
>dbj|D00724.1|YSCYS11A Saccharomyces cerevisiae YS11 gene, complete cds Length = 1893 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcagattcaaccctcaccatgaatgagggga 298 |||||||||||||||||||| || | || |||||||| ||||||| Sbjct: 1499 aagtcaatgtgcttctcagagtccaatctgaccatgaaagagggga 1454
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgat 341 |||||||||||| ||||||| | |||||| | ||||||||| Sbjct: 585150 ttgacgatctgcttgccaactcggatgtgcctttgcctgat 585190
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||||||| || | ||| | |||||||| |||||||||||||| |||| Sbjct: 492 cctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggcca 440
>ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 6 (LOC533892), mRNA Length = 727 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 321 cctgatgtggcgttgcctgatcaagacacgggcatggtggatggactttgcca 373 |||||||||||| || | ||| | |||||||| |||||||||||||| |||| Sbjct: 492 cctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggcca 440
>gb|AY692728.1| Saccharomyces cerevisiae clone FLH158303.01X YLR427W gene, complete cds Length = 2013 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gccaccacttgccttcttctg 197 ||||||||||||||||||||| Sbjct: 39 gccaccacttgccttcttctg 19
>gb|BC073375.1| Xenopus laevis MGC80804 protein, mRNA (cDNA clone MGC:80804 IMAGE:5513712), complete cds Length = 890 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 337 ctgatcaagacacgggcatggtggatggactttgcca 373 ||||||| ||||||||||| ||||||||||| |||| Sbjct: 606 ctgatcagcacacgggcatgatggatggacttggcca 570
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 accagcgtcgccgccaccact 185 ||||||||||||||||||||| Sbjct: 1820111 accagcgtcgccgccaccact 1820091
>gb|AY453853.1| Bacteriophage phi1026b, complete genome Length = 54865 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 accagcgtcgccgccaccact 185 ||||||||||||||||||||| Sbjct: 23119 accagcgtcgccgccaccact 23099
>ref|XM_570885.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE02160) partial mRNA Length = 674 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 301 ttgacgatctgcctgccaaccctgatgtggcgttgcctgat 341 |||||||||||| ||||||| | |||||| | ||||||||| Sbjct: 440 ttgacgatctgcttgccaactcggatgtgcctttgcctgat 400
>ref|XM_449630.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06501g) partial mRNA Length = 585 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gaagtcaatgtgcttctcaga 272 ||||||||||||||||||||| Sbjct: 474 gaagtcaatgtgcttctcaga 454
>gb|BC041242.1| Xenopus laevis ribosomal protein S9, mRNA (cDNA clone MGC:52774 IMAGE:4684220), complete cds Length = 698 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 337 ctgatcaagacacgggcatggtggatggactttgcca 373 ||||||| ||||||||||| ||||||||||| |||| Sbjct: 416 ctgatcagcacacgggcatgatggatggacttggcca 380
>gb|AF447491.1| Bacteriophage phiE125, complete genome Length = 53373 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 accagcgtcgccgccaccact 185 ||||||||||||||||||||| Sbjct: 23858 accagcgtcgccgccaccact 23838
>emb|AL359845.30| Human DNA sequence from clone RP11-41L14 on chromosome X tight junction protein 4 (peripheral) (TJP4) pseudogene, complete sequence Length = 122272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tcttcaccctgcctgcagggc 226 ||||||||||||||||||||| Sbjct: 70062 tcttcaccctgcctgcagggc 70082
>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the TLR4 gene for toll-like receptor 4, the 5' end of a novel gene and a CpG island, complete sequence Length = 146978 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 ccaccacttgccttcttctggttct 202 ||||||||| ||||||||||||||| Sbjct: 96464 ccaccacttcccttcttctggttct 96488
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gaagtcaatgtgcttctcaga 272 ||||||||||||||||||||| Sbjct: 674090 gaagtcaatgtgcttctcaga 674070
>gb|AC009899.12| Homo sapiens chromosome 18, clone RP11-19F9, complete sequence Length = 164359 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cttcctcttcaccctgcctgc 221 ||||||||||||||||||||| Sbjct: 73131 cttcctcttcaccctgcctgc 73151
>gb|AY063741.1| Burkholderia thailandensis phiE125 attachment site Length = 8095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 accagcgtcgccgccaccact 185 ||||||||||||||||||||| Sbjct: 593 accagcgtcgccgccaccact 573
>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293, complete sequence Length = 113091 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 161 caccaccagcgtcgccgccaccact 185 |||||||| |||||||||||||||| Sbjct: 98587 caccaccaccgtcgccgccaccact 98563
>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete sequence Length = 240827 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 caaccctcaccatgaatgagg 295 ||||||||||||||||||||| Sbjct: 50849 caaccctcaccatgaatgagg 50869
>gb|DQ066325.1| Ixodes scapularis isolate IS-6-12L-111 40S ribosomal protein S9 mRNA, complete cds Length = 579 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 tcagtgagaagtcaatgtgcttctc 269 |||| |||||||||||||||||||| Sbjct: 481 tcagcgagaagtcaatgtgcttctc 457
>emb|BX832246.1|CNS0A165 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 302 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 192 cttctggttcttcctcttcaccctgcctgcagggcctccaccgaatggacttgtcagtga 251 ||||| |||| | |||||||| || |||| | |||| |||||||| ||||| || || | Sbjct: 79 cttctcgttccttctcttcactcttcctggacggccaccaccgaagggactggtgagggc 20 Query: 252 gaagtcaatgtgcttct 268 |||||||||||||||| Sbjct: 19 aaagtcaatgtgcttct 3
>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence Length = 236969 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ttcctcattcctcttcctcat 160 ||||||||||||||||||||| Sbjct: 140138 ttcctcattcctcttcctcat 140158
>gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XII cosmid 9576 Length = 35805 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gccaccacttgccttcttctg 197 ||||||||||||||||||||| Sbjct: 23916 gccaccacttgccttcttctg 23896
>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658, complete sequence Length = 99089 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccact 185 |||||||| |||||||||||||||| Sbjct: 47198 caccaccaccgtcgccgccaccact 47222
>ref|NM_123604.2| Arabidopsis thaliana metalloendopeptidase AT5G42390 mRNA, complete cds Length = 4308 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 3791 tcttctggttcttcctcttc 3772
>ref|NM_102817.1| Arabidopsis thaliana unknown protein AT1G30800 mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tcctcttcctcatcaccacc 167 |||||||||||||||||||| Sbjct: 26 tcctcttcctcatcaccacc 45
>ref|XM_482539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1876 ctgcctgcagggcctccacc 1857
>ref|XM_474789.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3165 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1864 ctgcctgcagggcctccacc 1845
>ref|XM_471049.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3207 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1906 ctgcctgcagggcctccacc 1887
>gb|DQ213062.1| Taeniopygia guttata clone 0033P0001B11 40S ribosomal protein S9-like mRNA, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 349 cgggcatggtggatggactttgccatgccagccttgaagacaagagtctgaaggcg 404 ||||| |||||||||||||| |||| ||| ||||||||| ||||||| ||||| Sbjct: 425 cgggcgtggtggatggacttggccaggcccagcttgaagacctgagtctgcaggcg 370
>ref|NM_195591.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0036B06.21), mRNA Length = 3138 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1936 ctgcctgcagggcctccacc 1917
>ref|NM_192483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3102 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1852 ctgcctgcagggcctccacc 1833
>ref|NM_193412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3165 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1864 ctgcctgcagggcctccacc 1845
>ref|XM_471296.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1792 ctgcctgcagggcctccacc 1773
>ref|XM_471343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2466 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1906 ctgcctgcagggcctccacc 1887
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 36334 ctgcctgcagggcctccacc 36315
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 acacgggcatggtggatggactttgcca 373 |||||||| |||||||||||||| |||| Sbjct: 467 acacgggcgtggtggatggacttggcca 440
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 acacgggcatggtggatggactttgcca 373 |||||||| |||||||||||||| |||| Sbjct: 467 acacgggcgtggtggatggacttggcca 440
>gb|AC110744.6| Mus musculus chromosome 8, clone RP23-307G24, complete sequence Length = 183023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 aatgtgcttctcagattcaa 277 |||||||||||||||||||| Sbjct: 72458 aatgtgcttctcagattcaa 72477
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gccagccttgaagacaagag 394 |||||||||||||||||||| Sbjct: 59559 gccagccttgaagacaagag 59578
>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence Length = 212589 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 124851 caccaccaccgtcgccgccaccac 124874
>gb|BT012401.1| Arabidopsis thaliana At1g30800 mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tcctcttcctcatcaccacc 167 |||||||||||||||||||| Sbjct: 26 tcctcttcctcatcaccacc 45
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 caccagcgtcgccgccacca 183 |||||||||||||||||||| Sbjct: 374766 caccagcgtcgccgccacca 374747
>gb|BT011773.1| Arabidopsis thaliana At1g30800 mRNA, complete cds Length = 1177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tcctcttcctcatcaccacc 167 |||||||||||||||||||| Sbjct: 98 tcctcttcctcatcaccacc 117
>gb|AC182669.2| Populus trichocarpa clone Pop1-21I14, complete sequence Length = 149597 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 108798 tcttctggttcttcctcttc 108779
>ref|XM_447035.1| Candida glabrata CBS138, CAGL0H05511g partial mRNA Length = 585 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 aagtcaatgtgcttctcaga 272 |||||||||||||||||||| Sbjct: 473 aagtcaatgtgcttctcaga 454
>gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome 1, complete sequence Length = 184034 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gaaagtctcaggcctctcag 87 |||||||||||||||||||| Sbjct: 58592 gaaagtctcaggcctctcag 58611
>ref|XM_809245.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511445.90) partial mRNA Length = 1674 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ttgccttcttctggttcttc 204 |||||||||||||||||||| Sbjct: 182 ttgccttcttctggttcttc 163
>gb|AY326266.1| Gallus gallus ATP-binding cassette sub-family A member 4 (ABCA4) gene, exon 48, intron 48 and partial cds Length = 995 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cctcttcctcatcaccacca 168 |||||||||||||||||||| Sbjct: 695 cctcttcctcatcaccacca 714
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 caccagcgtcgccgccacca 183 |||||||||||||||||||| Sbjct: 471488 caccagcgtcgccgccacca 471469
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 4854 ctgcctgcagggcctccacc 4873
>gb|BT000785.1| Arabidopsis thaliana clone RAFL07-08-B09 (R11000) putative pitrilysin (At5g42390) mRNA, complete cds Length = 4221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 3791 tcttctggttcttcctcttc 3772
>emb|AL137797.9| Human DNA sequence from clone RP5-1109J22 on chromosome 1 Contains three novel genes, the OTX3 gene for orthodenticle homolog 3 (Drosophila) and a CpG island, complete sequence Length = 105345 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 ttcctcttcaccctgcctgc 221 |||||||||||||||||||| Sbjct: 34089 ttcctcttcaccctgcctgc 34108
>gb|AC136970.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074L01, complete sequence Length = 115339 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 107330 ctgcctgcagggcctccacc 107349
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 aagtcaatgtgcttctcaga 272 |||||||||||||||||||| Sbjct: 533856 aagtcaatgtgcttctcaga 533875
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 caccaccagcgtcgccgccaccac 184 ||||||||||||| |||||||||| Sbjct: 80359 caccaccagcgtcaccgccaccac 80336
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 caccaccagcgtcgccgccaccac 184 ||||||||||||| |||||||||| Sbjct: 335532 caccaccagcgtcaccgccaccac 335509
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 agaagtcaatgtgcttctcagatt 274 ||||||||||||||| |||||||| Sbjct: 42052 agaagtcaatgtgctactcagatt 42029
>gb|AC165282.2| Mus musculus BAC clone RP24-465P22 from chromosome 16, complete sequence Length = 185134 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 agaagtcaatgtgcttctcagatt 274 ||||||||||||||| |||||||| Sbjct: 180158 agaagtcaatgtgctactcagatt 180135
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 98609 ctgcctgcagggcctccacc 98590
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 123728 ctgcctgcagggcctccacc 123709
>emb|AL031644.1|SPCC613 S.pombe chromosome III cosmid c613 Length = 28999 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 attcctcttcctcatcacca 165 |||||||||||||||||||| Sbjct: 5935 attcctcttcctcatcacca 5916
>emb|AL022299.1|SPBC29A3 S.pombe chromosome II cosmid c29A3 Length = 42770 Score = 40.1 bits (20), Expect = 8.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 298 acattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatgg 357 |||||||| || ||| | ||||| | |||||| ||||| |||||| ||||| ||||| Sbjct: 23447 acattgacaatttgcttaccaacacggatgtgacgttggaagatcaacacacgtgcatga 23388 Query: 358 tggatggactttgcca 373 ||||||||||| |||| Sbjct: 23387 tggatggacttagcca 23372
>emb|BX511086.5| Zebrafish DNA sequence from clone DKEY-38P8 in linkage group 7, complete sequence Length = 228170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gtcaatgtgcttctcagatt 274 |||||||||||||||||||| Sbjct: 100375 gtcaatgtgcttctcagatt 100394
>gb|AF447343.1| Nectarinia senegalensis cytochrome c oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; and ATP synthase 8 and ATP synthase 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 999 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 taaagcactcacaacaccaa 108 |||||||||||||||||||| Sbjct: 274 taaagcactcacaacaccaa 293
>emb|Z14085.1|NTRS4 N.tabacum mRNA for ribosomal protein S4 (partial) Length = 373 Score = 40.1 bits (20), Expect = 8.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ccaccgaatggacttgtcagtgagaagtcaatgtgcttct 268 |||||||| ||||| | || ||||||||||||||||||| Sbjct: 145 ccaccgaaaggactgatgagagagaagtcaatgtgcttct 106
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 caccaccagcgtcgccgcca 180 |||||||||||||||||||| Sbjct: 1187233 caccaccagcgtcgccgcca 1187214
>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence Length = 162511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gttctcagcagtcagggcaa 436 |||||||||||||||||||| Sbjct: 14890 gttctcagcagtcagggcaa 14871
>ref|XM_686816.1| PREDICTED: Danio rerio similar to KIAA0309 (LOC563456), mRNA Length = 12588 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 9821 tcttctggttcttcctcttc 9802
>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0036B06, from Chromosome 10, complete sequence Length = 148263 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 133076 ctgcctgcagggcctccacc 133057
>ref|NM_001022686.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC613.03), partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 attcctcttcctcatcacca 165 |||||||||||||||||||| Sbjct: 373 attcctcttcctcatcacca 354
>ref|NM_001021744.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC29A3.12), partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 8.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 298 acattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatgg 357 |||||||| || ||| | ||||| | |||||| ||||| |||||| ||||| ||||| Sbjct: 428 acattgacaatttgcttaccaacacggatgtgacgttggaagatcaacacacgtgcatga 369 Query: 358 tggatggactttgcca 373 ||||||||||| |||| Sbjct: 368 tggatggacttagcca 353
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 115750 ctgcctgcagggcctccacc 115769
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 10226492 ctgcctgcagggcctccacc 10226511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 9588534 ctgcctgcagggcctccacc 9588515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 6569480 ctgcctgcagggcctccacc 6569461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1018890 ctgcctgcagggcctccacc 1018871
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 16832988 ctgcctgcagggcctccacc 16833007
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 7838182 ctgcctgcagggcctccacc 7838201
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 4461128 ctgcctgcagggcctccacc 4461109 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 2055368 ctgcctgcagggcctccacc 2055387 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 1814660 ctgcctgcagggcctccacc 1814641
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 20947958 ctgcctgcagggcctccacc 20947939 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 8747714 ctgcctgcagggcctccacc 8747733
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 7905372 ctgcctgcagggcctccacc 7905353 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 2667537 ctgcctgcagggcctccacc 2667518
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 3838447 ctgcctgcagggcctccacc 3838428
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 34752937 ctgcctgcagggcctccacc 34752956 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 26909679 ctgcctgcagggcctccacc 26909660 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 26612893 ctgcctgcagggcctccacc 26612874 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 11927543 ctgcctgcagggcctccacc 11927562
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 26951258 ctgcctgcagggcctccacc 26951239 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 20689701 ctgcctgcagggcctccacc 20689720
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 82734 ctgcctgcagggcctccacc 82753
>emb|AL606630.3|OSJN00041 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046P18, complete sequence Length = 140780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 97903 ctgcctgcagggcctccacc 97922
>emb|AL731578.2|OSJN00229 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017P10, complete sequence Length = 175563 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 50707 ctgcctgcagggcctccacc 50726
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 157035 ctgcctgcagggcctccacc 157016
>gb|AC097652.2| Homo sapiens BAC clone RP11-138B4 from 4, complete sequence Length = 114950 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctcttcctcatcaccaccag 169 |||||||||||||||||||| Sbjct: 28444 ctcttcctcatcaccaccag 28425
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 cctcttcctcatcaccacca 168 |||||||||||||||||||| Sbjct: 38204 cctcttcctcatcaccacca 38185
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 32659 ctgcctgcagggcctccacc 32678
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 151677 ctgcctgcagggcctccacc 151696
>gb|DQ108802.1| Arabidopsis thaliana clone 256155 mRNA sequence Length = 1292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 tcctcttcctcatcaccacc 167 |||||||||||||||||||| Sbjct: 932 tcctcttcctcatcaccacc 913
>gb|AC128650.6| Homo sapiens 3 BAC RP11-373L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119990 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cctcttcctcatcaccacca 168 |||||||||||||||||||| Sbjct: 44227 cctcttcctcatcaccacca 44246
>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library) complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 123013 caccaccaccgtcgccgccaccac 122990
>gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana BAC T17H7 from Chromosome 1, complete sequence Length = 73805 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tcctcttcctcatcaccacc 167 |||||||||||||||||||| Sbjct: 17088 tcctcttcctcatcaccacc 17107
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 14133 ctgcctgcagggcctccacc 14114
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 25463 ctgcctgcagggcctccacc 25482
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 126259 ctgcctgcagggcctccacc 126240
>dbj|AP004364.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445H04 Length = 202821 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 132903 ctgcctgcagggcctccacc 132884
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 90735 ctgcctgcagggcctccacc 90754
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 70785 ctgcctgcagggcctccacc 70804
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 10089 ctgcctgcagggcctccacc 10070
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 150407 ctgcctgcagggcctccacc 150388
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 122878 ctgcctgcagggcctccacc 122859
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 79284 ctgcctgcagggcctccacc 79265
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 12890 ctgcctgcagggcctccacc 12871
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 119754 ctgcctgcagggcctccacc 119735
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 155274 ctgcctgcagggcctccacc 155255
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 47054 ctgcctgcagggcctccacc 47035
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 4502 ctgcctgcagggcctccacc 4483
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 88222 ctgcctgcagggcctccacc 88203
>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1579_C03 Length = 122851 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 4958 ctgcctgcagggcctccacc 4939
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 14083 ctgcctgcagggcctccacc 14064
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 100106 ctgcctgcagggcctccacc 100087
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 83316 ctgcctgcagggcctccacc 83297
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 33616 ctgcctgcagggcctccacc 33597
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 125316 ctgcctgcagggcctccacc 125335
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 53322 ctgcctgcagggcctccacc 53303
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0543C11 Length = 159075 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 24821 ctgcctgcagggcctccacc 24840
>dbj|AB016888.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDH9 Length = 85791 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 31365 tcttctggttcttcctcttc 31346
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 90693 ctgcctgcagggcctccacc 90712
>emb|AJ341691.1|HSA341691 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BM16RS Length = 772 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcct 206 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ341475.1|HSA341475 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-DN12RS Length = 759 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcct 206 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ341863.1|HSA341863 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-BC12RS Length = 769 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcct 206 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|CR855222.6| Zebrafish DNA sequence from clone CH211-265N9 in linkage group 12, complete sequence Length = 140480 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 63564 tcttctggttcttcctcttc 63583
>gb|AC006584.12|AC006584 Mus musculus BAC GSMB-407A4 (Genome Systems Mouse BAC Library) complete sequence Length = 160288 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gccagccttgaagacaagag 394 |||||||||||||||||||| Sbjct: 43122 gccagccttgaagacaagag 43103
>gb|AC006056.2|AC006056 Mus musculus Yp BAC GSMB-368G7 (Genome Systems Mouse BAC Library) complete sequence Length = 52614 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 15782 caccaccaccgtcgccgccaccac 15805
>gb|BC082895.1| Xenopus laevis hypothetical LOC494780, mRNA (cDNA clone IMAGE:6951621), partial cds Length = 2055 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cattcctcttcctcatcacc 164 |||||||||||||||||||| Sbjct: 153 cattcctcttcctcatcacc 134
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 cctcttcctcatcaccacca 168 |||||||||||||||||||| Sbjct: 41498 cctcttcctcatcaccacca 41517
>gb|AF008444.1|AF008444 Arabidopsis thaliana chloroplast processing enzyme (CPE) gene, complete cds Length = 7875 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 7543 tcttctggttcttcctcttc 7524
>gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome 13, complete sequence Length = 159689 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ttcttctggttcttcctcttcacc 213 ||||||||||||||||| |||||| Sbjct: 77202 ttcttctggttcttcctgttcacc 77225
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 7843281 ctgcctgcagggcctccacc 7843300
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 16786221 ctgcctgcagggcctccacc 16786240
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09, complete sequence Length = 160462 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 70640 ctgcctgcagggcctccacc 70621
>emb|AL831804.5|CNS08CAH Oryza sativa chromosome 12, . BAC OSJNBb0027C15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115632 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 44870 ctgcctgcagggcctccacc 44889
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ctgcctgcagggcctccacc 233 |||||||||||||||||||| Sbjct: 264994 ctgcctgcagggcctccacc 265013
>gb|AC163693.3| Mus musculus BAC clone RP24-70O15 from chromosome 13, complete sequence Length = 219890 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ttcttctggttcttcctcttcacc 213 ||||||||||||||||| |||||| Sbjct: 1854 ttcttctggttcttcctgttcacc 1831
>gb|AC148319.2| Mus musculus BAC clone RP24-540G19 from Y, complete sequence Length = 159680 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 152513 caccaccaccgtcgccgccaccac 152536
>emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chromosome 4, complete sequence Length = 210380 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gaatggacttgtcagtgaga 253 |||||||||||||||||||| Sbjct: 139658 gaatggacttgtcagtgaga 139677
>gb|BC108444.1| Xenopus laevis cDNA clone IMAGE:7980441, containing frame-shift errors Length = 2067 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cattcctcttcctcatcacc 164 |||||||||||||||||||| Sbjct: 182 cattcctcttcctcatcacc 163
>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219, complete sequence Length = 72880 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 65779 caccaccaccgtcgccgccaccac 65802
>dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT48O21, TM0211, complete sequence Length = 137303 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cttcttctggttcttcctcttcac 212 |||| ||||||||||||||||||| Sbjct: 105599 cttcctctggttcttcctcttcac 105622
>dbj|AP006118.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT47H13, TM0201, complete sequence Length = 79882 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 37056 caccaccaccgtcgccgccaccac 37079
>dbj|AP004913.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02A14, TM0072a, complete sequence Length = 100740 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 caccaccagcgtcgccgccaccac 184 |||||||| ||||||||||||||| Sbjct: 66728 caccaccatcgtcgccgccaccac 66751
>emb|AL929039.7| Zebrafish DNA sequence from clone DKEY-245I6, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tcttctggttcttcctcttc 210 |||||||||||||||||||| Sbjct: 6480 tcttctggttcttcctcttc 6499
>emb|AJ342190.1|HSA342190 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-6AM7RS Length = 691 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcct 206 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>emb|AJ342181.1|HSA342181 Homo sapiens genomic sequence surrounding NotI site, clone HSJ6-AC2RS Length = 711 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gccttcttctggttcttcct 206 |||||||||||||||||||| Sbjct: 353 gccttcttctggttcttcct 334
>dbj|AB029515.1| Schizosaccharomyces pombe mRNA for ribosomal protein S9 homolog, partial cds Length = 637 Score = 40.1 bits (20), Expect = 8.1 Identities = 62/76 (81%) Strand = Plus / Minus Query: 298 acattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgggcatgg 357 |||||||| || ||| | ||||| | |||||| ||||| |||||| ||||| ||||| Sbjct: 419 acattgacaatttgcttaccaacacggatgtgacgttggaagatcaacacacgtgcatga 360 Query: 358 tggatggactttgcca 373 ||||||||||| |||| Sbjct: 359 tggatggacttagcca 344
>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete sequence Length = 175872 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gttctcagcagtcagggcaa 436 |||||||||||||||||||| Sbjct: 107002 gttctcagcagtcagggcaa 106983 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,460,169 Number of Sequences: 3902068 Number of extensions: 5460169 Number of successful extensions: 136048 Number of sequences better than 10.0: 232 Number of HSP's better than 10.0 without gapping: 249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134087 Number of HSP's gapped (non-prelim): 1940 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
