>NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 173

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD----- 298
           V +VP+P +RG   T   +      I EG  + I+V+     + S+T D+C + +     
Sbjct: 60  VNLVPNPPQRGENLTIAAAGVLQTTIEEGAYIDIEVRLGYIKLISQTYDLCEQLEENDID 119

Query: 297 ---CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
              CP     +EL+    +PS  PPG Y++  +     DE+++C++
Sbjct: 120 GLKCPIEEGVYELNKIVEIPSEVPPGKYSVIARAYNVDDEQITCLT 165

>NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 192

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD-- 298
           V + P+P   G   TF    + DK I EG  V ++V+Y    +  +T D+C    K D  
Sbjct: 82  VIVTPNPPVAGQNLTFTAVGTLDKTIEEGAYVEVEVRYGFIKLIHQTYDLCEEIVKVDLQ 141

Query: 297 CPATSDFE-LSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
           CP  S  + ++ +  +P   PPG Y +  +   K DE ++C++
Sbjct: 142 CPIKSGKQTITKNVEIPEEVPPGKYLVVARAYTKDDEYITCLT 184

>NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLVI-DVKYWIFNVYSETDDIC-----TKTD 298
           V++ P+P   G       S +  + I +G  V+ +VKY +  +  +T D+C      +  
Sbjct: 63  VDLSPNPPLPGKTLAITASGTLREKIEDGAYVLLEVKYGLITLVRQTADLCEQLVNVELK 122

Query: 297 CP-ATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGFLAP 142
           CP    D  L+    LP   PPG YT+Q  +     E ++C+    +I F  P
Sbjct: 123 CPLGPGDMTLTKQVDLPKQIPPGKYTVQADVFNSDGEHITCLK-ALNIEFKGP 174

>NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-----D 298
           V++VP+P   G   +   S +  + + EG  V ++VKY +  +  +T D+C +      +
Sbjct: 63  VDLVPNPPLPGQTLSINASGNLKERVEEGAYVALEVKYGLITLIKQTADLCEQIKNVDLE 122

Query: 297 CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 175
           CP    +  L+    LPS  PPG Y +   +  K  ++++C+
Sbjct: 123 CPLEKGEMTLTKQVDLPSHIPPGKYNVHADVYTKDGKKITCL 164

>NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 178

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-----D 298
           V++ P+P + G     K S    + I EG  + + VKY +  + +   D+C +      +
Sbjct: 59  VDLSPNPPKAGESLVIKASGDVTQKIEEGAYINLSVKYGLIRLINTKADLCEQIKNVDLE 118

Query: 297 CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
           CP      ++  S  LP+  PPG YT+   +  K ++++SC++
Sbjct: 119 CPIDEGKLDIVKSVDLPNEIPPGKYTVFADVYTKDNKKISCLT 161

>NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 177

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC-----TKTD 298
           V + P+P E G   T + S    + I EG  V + VKY    + + + D+C      + +
Sbjct: 59  VILTPNPPEAGQTLTIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMKNVELE 118

Query: 297 CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS----FG-FSIGFL 148
           CP       ++ +  LP   PPG YT++  +    D+ ++C++    FG  ++GFL
Sbjct: 119 CPIKKGRLSITKNVELPKEIPPGKYTVEADVYNSDDKHITCLTATVFFGRKTLGFL 174

>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 196

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD-- 298
           V I P+P  RG   TF       ++I +G  V +DV+Y    +  +T D+C   TK D  
Sbjct: 86  VVIDPNPPLRGENLTFVAKGVLSQDIEDGAYVEVDVRYGFIKLLHQTFDLCEEITKIDLE 145

Query: 297 CPATSDFELSHSQT-LPSITPPGSYTIQMKMLGKHDEELSCIS 172
           CP +   ++   +  +P+  PPG Y +  +   K D  ++C+S
Sbjct: 146 CPISKGQQVIEKKVEIPAEVPPGKYIVSARAYTKDDIFITCLS 188

>NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 213

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD----- 298
           +EI P+P  RG   T +        + +G  V ++V+     + SET D+C + +     
Sbjct: 63  IEITPNPPHRGKNLTVEARGDLFGPVEDGAYVTVEVRLGYIKLLSETFDLCKELEENDLG 122

Query: 297 --CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
             CP    ++ELS +  +P   PPG Y +  +     DE ++C++
Sbjct: 123 LQCPLEEGEYELSKTVEIPQQVPPGRYHVVARAYTVDDEPITCLT 167

>NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 189

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD----- 298
           + I P+P  +G   T + S    +++ EG  + ++V+Y    + S+T D+C +++     
Sbjct: 78  LSIDPNPPAKGQNLTIEASGYLYEDVEEGAYIEVEVRYGYIRLISQTLDLCEQSEQVDWS 137

Query: 297 CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 175
           CP  + D +L+    LP+  PPG Y    +     D+ ++C+
Sbjct: 138 CPIKAGDLKLNKQIELPNEIPPGKYVAVARAYTVDDDLITCL 179

>NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 169

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGK-LVIDVKYWIFNVYSETDDICTKT-----D 298
           V++ P+P + G     + + +  + I  G  +V++VKY +  +  +T D+C +       
Sbjct: 61  VDLAPNPPKAGTTLKIRAAGNLHERIEAGAYVVLEVKYGLITLLRDTADLCAQLTNVDLQ 120

Query: 297 CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 175
           CP       L+    LPS  P G YT+   +  K ++ ++C+
Sbjct: 121 CPLEEGPMVLTKEVDLPSQIPRGRYTVHADVYTKDNKRITCL 162

>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 188

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 15/116 (12%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT------ 301
           + ++P+P   G   T +   +    +  G  V I VKY    + +E  DIC K       
Sbjct: 68  INLIPNPPAAGKNLTIETEINVGTTVLNGSYVDIQVKYGFVRIVNERLDICDKAYELAAV 127

Query: 300 DCPATSDFELSHSQ-TLPSITPPGSYTIQMKMLGKHDEELSCIS-------FGFSI 157
           +CP         +  +LP   PPG Y +         E+L+C+S       FGF +
Sbjct: 128 ECPVEPGIITKQATISLPWAIPPGRYHVLATAYNADGEQLTCVSASVSFSHFGFQL 183

>NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 193

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT------ 301
           + + PDP   G   T +   +    +++G    + VK  +  + +   D+C +       
Sbjct: 80  IVVSPDPPVPGQNLTVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQARESNAD 139

Query: 300 -DCPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGF 151
             CP ++ ++EL H+  LP   PPG + + +    +    L C+      GF
Sbjct: 140 LQCPLSAGEYELEHTVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFGF 191

>NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 185

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD----- 298
           +++VP+P +RG     K S    + I EG  V ++V+     + ++T D+C   +     
Sbjct: 69  LDLVPNPPKRGSKLVIKASGEIFETIEEGAYVDVEVRLGYIKLLTQTYDLCEILEDNDVD 128

Query: 297 ---CPATSDF--ELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
              CP        LS    +P   PPG Y +  +     D+ ++CI+
Sbjct: 129 GLTCPIKKGKYDNLSKDVDIPQEVPPGKYLVTARAYTNDDDLITCIT 175

>NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP) (NPC2 homolog)
          Length = 173

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
 Frame = -1

Query: 459 VEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD----- 298
           V + P+P  RG   T   +    + I EG  + ++V+     + S+T D+C   +     
Sbjct: 60  VNLDPNPPVRGENLTISANGEVFETIEEGAYIDVEVRLGYIRLLSQTFDLCETLEDNDIE 119

Query: 297 ---CPAT-SDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 172
              CP    ++ +     +P   PPG Y +  +   + D+ ++C++
Sbjct: 120 GLSCPIEPGEYNIKKIVEIPGEVPPGKYVVVARAYTEKDDLITCLT 165

>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 508

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
 Frame = -1

Query: 438 VERGVPATFKISASTDKNITEGKLVIDVKYWIFNV-------YSETDDICTKTDCPATSD 280
           + + VPA + +     K ITEG +  D K + ++V       YS   D+  K      S 
Sbjct: 14  LSKSVPAKYAVDFEVPKGITEGYVTSDKKRFTYHVSISSVAPYSNESDVIQKKKSGLKSI 73

Query: 279 FELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 184
            E+   Q +  I+      ++ +  GK  +EL
Sbjct: 74  MEIEKIQKIEPIS-----IMEFRSSGKRIDEL 100

>SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor (EC 4.2.3.11)|
           (SSS)
          Length = 590

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 438 VERG-VPATFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSD 280
           +ERG VP   +   + D N +E + V  VK+ I   + E + + T +DCP T D
Sbjct: 496 LERGDVPKAIQCYMN-DTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDD 548

>PLSC_PHYPO (P19203) Plasmin C precursor|
          Length = 150

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 333 YSETDDICTKTDCPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHD 193
           Y++T   CT   C   +D++LS  QT  S  P    T+++     HD
Sbjct: 39  YTQTAS-CTPIPCTKNTDYQLSILQTCVSAIPQTKGTLEISSYPSHD 84

>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1086

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 297 CPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 184
           CP   +  L+ +   P+ITPP SYT +M  +    +E+
Sbjct: 196 CPTEVNDNLNQTVEKPNITPPASYTNKMDEVQNRIKEI 233

>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1|
          Length = 807

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 26/88 (29%), Positives = 36/88 (40%)
 Frame = -1

Query: 417 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 238
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 574 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 633

Query: 237 PGSYTIQMKMLGKHDEELSCISFGFSIG 154
           P S  +   +LG  DE++ C      IG
Sbjct: 634 P-SGKVHFALLGTWDEKMECFKVQPVIG 660

>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1228

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = -1

Query: 459  VEIVPDPVERGVPATFKISA--STDKNITEGKLVIDVKYWIFNVYSETD--DICTKTDCP 292
            V+IV +P+  GVP+   +     T       KL I+ +  +F+  SE D  D C K   P
Sbjct: 1005 VDIVLNPL--GVPSRMNLGQIFETQLGFAAKKLGINFETPVFDGASEGDVNDFCKKAGLP 1062

Query: 291  ATSDFELSHSQT 256
              S F+L   +T
Sbjct: 1063 ENSKFQLYDGRT 1074

>GPC5_HUMAN (P78333) Glypican-5 precursor|
          Length = 572

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = -3

Query: 298 LPGNF*FRAISLANLTINHSTRFLHHSDEDARKA**GIELHLLRVQHWLPCPGRPELKAC 119
           LP     +A++L    IN +T +LH S E +R         LL++Q+   C G    K C
Sbjct: 220 LPSRTFLQALNLGIEVIN-TTDYLHFSKECSRA--------LLKMQYCPHCQGLALTKPC 270

Query: 118 IGCMLN 101
           +G  LN
Sbjct: 271 MGYCLN 276

>OSBP1_RABIT (P16258) Oxysterol-binding protein 1|
          Length = 809

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = -1

Query: 417 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 238
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 576 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 635

Query: 237 PGSYTIQMKMLGKHDEELSC 178
           P S  +   +LG  DE++ C
Sbjct: 636 P-SGKVHFALLGTWDEKMDC 654

>ADEC_CLOAB (Q97KN0) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)|
          Length = 570

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +2

Query: 122 CLQLRATGARKPMLNPKEMQLNSSSCFPSIFI*MV*EPGGVI--DGKVCE*DSSKSEVAG 295
           C +L   GA  P      + L        + + MV + G V+  D K  +   SKS++  
Sbjct: 309 CYKLERVGAIAPSYKADLVVLED---LKDVKVNMVIKSGEVVFKDNKHLKDMGSKSDITK 365

Query: 296 QSVFVQMSSVSE*TLKIQYLTSITSFPSVMFLSVEAEILK 415
            S  V +  VSE  L+++  T + S  SV   S+  + +K
Sbjct: 366 VSNTVNIKKVSEENLELKLDTDVCSIISVALNSISTKNVK 405


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,748,347
Number of Sequences: 219361
Number of extensions: 1333069
Number of successful extensions: 3777
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3770
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)