Clone Name | rbasd18b08 |
---|---|
Clone Library Name | barley_pub |
>Y1280_ARATH (O80543) Protein At1g22800| Length = 355 Score = 179 bits (455), Expect = 6e-45 Identities = 86/114 (75%), Positives = 99/114 (86%) Frame = -1 Query: 738 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRDTALAT 559 RDAGNLL+RAGF+LPGVDVD Y VKY A++L+EHLRAM ETNAL +R+ IL R+TA+AT Sbjct: 239 RDAGNLLTRAGFSLPGVDVDEYVVKYKRAMDLIEHLRAMGETNALLERNKILNRETAVAT 298 Query: 558 AAIYQSMFGLEDGTIPATFQVIYMTGWKEHSSQQKPKRRGSATVSFGDIRKQFG 397 AAIY SMF EDGTIPATFQVIYMTGW+EHSS + KRRGSATVSF D++KQFG Sbjct: 299 AAIYDSMFATEDGTIPATFQVIYMTGWREHSSHPQAKRRGSATVSFTDLQKQFG 352
>VIT_ONCMY (Q92093) Vitellogenin precursor (VTG) [Contains: Lipovitellin I| (LVI); Phosvitin (PV); Lipovitellin II (LVII)] Length = 1659 Score = 31.6 bits (70), Expect = 2.7 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 14/90 (15%) Frame = +1 Query: 181 QGMSRSTQMHRRRIVSDARGASANFGGN---QHSTLFLQMGSLGSP-----------KLC 318 QG++RSTQ R ++ S ++A+F G+ L+ + S P +C Sbjct: 934 QGVARSTQQSRDKLTSMIADSAASFAGSLSRSSEILYSDLPSNFKPIIKAIVVHLEETIC 993 Query: 319 CEQLGVFFSFLKRCFHIR*SSSVLVGTKLF 408 E+LGV K CF S+ + LF Sbjct: 994 VERLGV-----KACFEFTSESAAFIRNTLF 1018
>TREF_SHIFL (Q83PS8) Cytoplasmic trehalase (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 549 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 Query: 738 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 574 RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 333 RDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>TREF_ECOLI (P62601) Cytoplasmic trehalase (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 549 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 Query: 738 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 574 RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 333 RDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>TREF_ECOL6 (Q8FCI4) Cytoplasmic trehalase (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 549 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 Query: 738 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 574 RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 333 RDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>TREF_ECO57 (P62602) Cytoplasmic trehalase (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 549 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 Query: 738 RDAGNLLSRAGFALPGVDVDRYTVKYNSALELVEHLRAMAETNALFQRSPILKRD 574 RD G L S +D++ + K SA+ + L+ ET ALF++ +RD Sbjct: 333 RDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRD 387
>MG101_DEBHA (Q6BN05) Mitochondrial genome maintenance protein MGM101,| mitochondrial precursor Length = 275 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 217 RIVSDARGASANFGGNQHSTLFLQMGSLGSPKLCCEQLGV 336 R+VS ARG FGG++ T L+ + CC+ LG+ Sbjct: 186 RLVSVARGEQDYFGGDEKITTALEGCKSNALMRCCKDLGI 225
>MG101_CANAL (Q5AI97) Mitochondrial genome maintenance protein MGM101,| mitochondrial precursor Length = 275 Score = 30.0 bits (66), Expect = 7.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 217 RIVSDARGASANFGGNQHSTLFLQMGSLGSPKLCCEQLGV 336 R+VS ARG FGG + T L+ + CC+ LG+ Sbjct: 186 RLVSIARGEQDYFGGEEKLTTALEGCKSNALMRCCKDLGI 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,863,044 Number of Sequences: 219361 Number of extensions: 2460203 Number of successful extensions: 6240 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6239 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7706249192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)