ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
2emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 115 2e-22
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
4emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 115 2e-22
5gb|AY109655.1| Zea mays CL41045_1 mRNA sequence 76 2e-10
6emb|BX813308.4| Mouse DNA sequence from clone RP23-34G12 on chro... 46 0.16
7dbj|AB057812.1| Cleistostoma dilatatum mitochondrial gene for 12... 46 0.16
8gb|AY260641.1| Cardamine tenera isolate GK chloroplast trnL-trnF... 44 0.65
9ref|NM_053081.1| Mus musculus Fanconi anemia, complementation gr... 44 0.65
10gb|BC050890.1| Mus musculus Fanconi anemia, complementation grou... 44 0.65
11gb|BC100266.1| Rattus norvegicus cDNA clone IMAGE:7383234, with ... 44 0.65
12gb|AY049715.1| Mus musculus Fanconi anemia complementation group... 44 0.65
13gb|AF112439.1|AF112439 Mus musculus Fanconi anemia group G prote... 44 0.65
14ref|XM_233141.3| PREDICTED: Rattus norvegicus phosphatidylinosit... 44 0.65
15gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence... 44 0.65
16emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chro... 44 0.65
17dbj|AB002118.1| Ilyoplax ningpoensis mitochondrial DNA for 12S, ... 44 0.65
18dbj|AB002116.1| Ilyoplax formosensis mitochondrial DNA for 12S, ... 44 0.65
19ref|NM_001016398.2| Xenopus tropicalis hypothetical protein LOC5... 42 2.6
20emb|AL121931.10|HS1131C10 Human DNA sequence from clone RP5-1131... 42 2.6
21emb|BX908767.8| Zebrafish DNA sequence from clone DKEY-66B12 in ... 42 2.6
22emb|CR391655.1| Gallus gallus finished cDNA, clone ChEST898k24 42 2.6
23emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 i... 42 2.6
24gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, com... 42 2.6
25gb|AC144527.3| Homo sapiens BAC clone RP13-932E12 from 2, comple... 42 2.6
26emb|BX936284.27| Zebrafish DNA sequence from clone DKEY-22A24 in... 42 2.6
27emb|BX510992.5| Zebrafish DNA sequence from clone DKEYP-93H6 in ... 42 2.6
28emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 ... 42 2.6
29emb|CR761157.2| Xenopus tropicalis finished cDNA, clone TEgg061m03 42 2.6
30emb|AL935040.6| Zebrafish DNA sequence from clone CH211-176L21, ... 42 2.6
31emb|AL772165.15| Mouse DNA sequence from clone RP23-118G3 on chr... 42 2.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                           
Query: 392     ttggaaccaaattgtttccttatgtcaccaaatgatacagtggcagaaccccttctctta 451
               |||||||||||||||||   || ||||| |||||||||||| ||||||||||||||||||
Sbjct: 5391417 ttggaaccaaattgtttttgtaagtcactaaatgatacagtagcagaaccccttctctta 5391476

                                                                 
Query: 452     ggcttttgttgtgatgaatgctccttccacccagtcatgtaaattacctg 501
               |  ||||| ||||||| |||||||||||| |||||||| ||||| |||||
Sbjct: 5391477 gctttttgctgtgatggatgctccttccagccagtcatataaataacctg 5391526



 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                           
Query: 497     acctgaaaggttgctggtatggttccatcttctaacccaaacattgactggtaaatggct 556
               ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||| 
Sbjct: 5391657 acctgaaaggttgctggaacagttccatcttctagcccaaacattgactggtaaatggcc 5391716

                                               
Query: 557     gcagtagctagtgctgtatctctctttaatat 588
               ||||| || |  ||||||||| ||||||||||
Sbjct: 5391717 gcagttgccaaagctgtatctttctttaatat 5391748



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                    
Query: 686     tcaactcctggaagggcgaagcctgcccttgacaaaaggtttcctgcatcacg 738
               |||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 5392233 tcaactcctggaagggtgaagcctgctcttgtcaaaaggtttcctgcatcacg 5392285



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 594     ttctttgaaagagagcatttgtttctgccattgccctaagatgttccacaagttcca 650
               |||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||
Sbjct: 5391842 ttctttgaaagagagcatttgtttcccccatcgctctaagatgttcaacaagttcca 5391898
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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 392   ttggaaccaaattgtttccttatgtcaccaaatgatacagtggcagaaccccttctctta 451
             |||||||||||||||||   || ||||| |||||||||||| ||||||||||||||||||
Sbjct: 63485 ttggaaccaaattgtttttgtaagtcactaaatgatacagtagcagaaccccttctctta 63544

                                                               
Query: 452   ggcttttgttgtgatgaatgctccttccacccagtcatgtaaattacctg 501
             |  ||||| ||||||| |||||||||||| |||||||| ||||| |||||
Sbjct: 63545 gctttttgctgtgatggatgctccttccagccagtcatataaataacctg 63594



 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                         
Query: 497   acctgaaaggttgctggtatggttccatcttctaacccaaacattgactggtaaatggct 556
             ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||| 
Sbjct: 63725 acctgaaaggttgctggaacagttccatcttctagcccaaacattgactggtaaatggcc 63784

                                             
Query: 557   gcagtagctagtgctgtatctctctttaatat 588
             ||||| || |  ||||||||| ||||||||||
Sbjct: 63785 gcagttgccaaagctgtatctttctttaatat 63816



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                  
Query: 686   tcaactcctggaagggcgaagcctgcccttgacaaaaggtttcctgcatcacg 738
             |||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 64301 tcaactcctggaagggtgaagcctgctcttgtcaaaaggtttcctgcatcacg 64353



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 594   ttctttgaaagagagcatttgtttctgccattgccctaagatgttccacaagttcca 650
             |||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||
Sbjct: 63910 ttctttgaaagagagcatttgtttcccccatcgctctaagatgttcaacaagttcca 63966
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                           
Query: 392     ttggaaccaaattgtttccttatgtcaccaaatgatacagtggcagaaccccttctctta 451
               |||||||||||||||||   || ||||| |||||||||||| ||||||||||||||||||
Sbjct: 5391406 ttggaaccaaattgtttttgtaagtcactaaatgatacagtagcagaaccccttctctta 5391465

                                                                 
Query: 452     ggcttttgttgtgatgaatgctccttccacccagtcatgtaaattacctg 501
               |  ||||| ||||||| |||||||||||| |||||||| ||||| |||||
Sbjct: 5391466 gctttttgctgtgatggatgctccttccagccagtcatataaataacctg 5391515



 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                           
Query: 497     acctgaaaggttgctggtatggttccatcttctaacccaaacattgactggtaaatggct 556
               ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||| 
Sbjct: 5391646 acctgaaaggttgctggaacagttccatcttctagcccaaacattgactggtaaatggcc 5391705

                                               
Query: 557     gcagtagctagtgctgtatctctctttaatat 588
               ||||| || |  ||||||||| ||||||||||
Sbjct: 5391706 gcagttgccaaagctgtatctttctttaatat 5391737



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                    
Query: 686     tcaactcctggaagggcgaagcctgcccttgacaaaaggtttcctgcatcacg 738
               |||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 5392222 tcaactcctggaagggtgaagcctgctcttgtcaaaaggtttcctgcatcacg 5392274



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                        
Query: 594     ttctttgaaagagagcatttgtttctgccattgccctaagatgttccacaagttcca 650
               |||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||
Sbjct: 5391831 ttctttgaaagagagcatttgtttcccccatcgctctaagatgttcaacaagttcca 5391887
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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score =  115 bits (58), Expect = 2e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                         
Query: 392   ttggaaccaaattgtttccttatgtcaccaaatgatacagtggcagaaccccttctctta 451
             |||||||||||||||||   || ||||| |||||||||||| ||||||||||||||||||
Sbjct: 74391 ttggaaccaaattgtttttgtaagtcactaaatgatacagtagcagaaccccttctctta 74332

                                                               
Query: 452   ggcttttgttgtgatgaatgctccttccacccagtcatgtaaattacctg 501
             |  ||||| ||||||| |||||||||||| |||||||| ||||| |||||
Sbjct: 74331 gctttttgctgtgatggatgctccttccagccagtcatataaataacctg 74282



 Score =  103 bits (52), Expect = 8e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                         
Query: 497   acctgaaaggttgctggtatggttccatcttctaacccaaacattgactggtaaatggct 556
             ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||| 
Sbjct: 74151 acctgaaaggttgctggaacagttccatcttctagcccaaacattgactggtaaatggcc 74092

                                             
Query: 557   gcagtagctagtgctgtatctctctttaatat 588
             ||||| || |  ||||||||| ||||||||||
Sbjct: 74091 gcagttgccaaagctgtatctttctttaatat 74060



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 686   tcaactcctggaagggcgaagcctgcccttgacaaaaggtttcctgcatcacg 738
             |||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 73575 tcaactcctggaagggtgaagcctgctcttgtcaaaaggtttcctgcatcacg 73523



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 594   ttctttgaaagagagcatttgtttctgccattgccctaagatgttccacaagttcca 650
             |||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||
Sbjct: 73966 ttctttgaaagagagcatttgtttcccccatcgctctaagatgttcaacaagttcca 73910
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>gb|AY109655.1| Zea mays CL41045_1 mRNA sequence
          Length = 656

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 678 gatctacatcaactcctggaagggcgaagcctgcccttgacaaaaggtttcctgcatc 735
           |||| ||||||||||||||| ||| |||||||||||||| |||||||||| |||||||
Sbjct: 176 gatcaacatcaactcctggaggggtgaagcctgcccttgtcaaaaggttttctgcatc 233
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>emb|BX813308.4| Mouse DNA sequence from clone RP23-34G12 on chromosome 2, complete
             sequence
          Length = 133963

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 392   ttggaaccaaattgtttccttat 414
             |||||||||||||||||||||||
Sbjct: 97847 ttggaaccaaattgtttccttat 97869
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>dbj|AB057812.1| Cleistostoma dilatatum mitochondrial gene for 12S rRNA, tRNA-Val,
           16S rRNA
          Length = 1236

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 36  caacatttttattctacaaaaac 58
           |||||||||||||||||||||||
Sbjct: 356 caacatttttattctacaaaaac 334
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>gb|AY260641.1| Cardamine tenera isolate GK chloroplast trnL-trnF intergenic
           spacer, complete sequence
          Length = 756

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 408 tccttatgtcaccaaatgatac 429
           ||||||||||||||||||||||
Sbjct: 518 tccttatgtcaccaaatgatac 539
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>ref|NM_053081.1| Mus musculus Fanconi anemia, complementation group G (Fancg), mRNA
          Length = 1923

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 650 agagcactgttgtacttgactg 671
           ||||||||||||||||||||||
Sbjct: 818 agagcactgttgtacttgactg 839
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>gb|BC050890.1| Mus musculus Fanconi anemia, complementation group G, mRNA (cDNA
            clone IMAGE:6418786), complete cds
          Length = 2998

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 650  agagcactgttgtacttgactg 671
            ||||||||||||||||||||||
Sbjct: 1266 agagcactgttgtacttgactg 1287
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>gb|BC100266.1| Rattus norvegicus cDNA clone IMAGE:7383234, with apparent retained
           intron
          Length = 2417

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 650 agagcactgttgtacttgactg 671
           ||||||||||||||||||||||
Sbjct: 511 agagcactgttgtacttgactg 532
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>gb|AY049715.1| Mus musculus Fanconi anemia complementation group G (Fancg) mRNA,
           complete cds
          Length = 1876

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 650 agagcactgttgtacttgactg 671
           ||||||||||||||||||||||
Sbjct: 809 agagcactgttgtacttgactg 830
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>gb|AF112439.1|AF112439 Mus musculus Fanconi anemia group G protein mRNA, complete cds
          Length = 1923

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 650 agagcactgttgtacttgactg 671
           ||||||||||||||||||||||
Sbjct: 818 agagcactgttgtacttgactg 839
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>ref|XM_233141.3| PREDICTED: Rattus norvegicus phosphatidylinositol glycan, class O
            (predicted) (Pigo_predicted), mRNA
          Length = 4971

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 650  agagcactgttgtacttgactg 671
            ||||||||||||||||||||||
Sbjct: 4255 agagcactgttgtacttgactg 4276
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>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence
          Length = 124230

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 650   agagcactgttgtacttgactg 671
             ||||||||||||||||||||||
Sbjct: 61507 agagcactgttgtacttgactg 61528
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>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
              sequence
          Length = 208030

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 650    agagcactgttgtacttgactg 671
              ||||||||||||||||||||||
Sbjct: 143092 agagcactgttgtacttgactg 143071
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>dbj|AB002118.1| Ilyoplax ningpoensis mitochondrial DNA for 12S, 16S rRNA and
           tRNA-Val, partial and complete sequence
          Length = 1624

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  caacatttttattctacaaaaa 57
           ||||||||||||||||||||||
Sbjct: 739 caacatttttattctacaaaaa 718
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>dbj|AB002116.1| Ilyoplax formosensis mitochondrial DNA for 12S, 16S rRNA and
           tRNA-Val, partial and complete sequence
          Length = 1626

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 36  caacatttttattctacaaaaa 57
           ||||||||||||||||||||||
Sbjct: 743 caacatttttattctacaaaaa 722
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>ref|NM_001016398.2| Xenopus tropicalis hypothetical protein LOC549152 (LOC549152), mRNA
          Length = 1701

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 416  tcaccaaatgatacagtggcagaacccct 444
            |||||||| |||||||| |||||||||||
Sbjct: 1217 tcaccaaaagatacagtagcagaacccct 1189
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>emb|AL121931.10|HS1131C10 Human DNA sequence from clone RP5-1131C10 on chromosome 6q12-13,
             complete sequence
          Length = 133751

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 613   tgtttctgccattgccctaag 633
             |||||||||||||||||||||
Sbjct: 47472 tgtttctgccattgccctaag 47492
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>emb|BX908767.8| Zebrafish DNA sequence from clone DKEY-66B12 in linkage group 3,
             complete sequence
          Length = 177868

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    aacatttttattctacaaaaa 57
             |||||||||||||||||||||
Sbjct: 23041 aacatttttattctacaaaaa 23061
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>emb|CR391655.1| Gallus gallus finished cDNA, clone ChEST898k24
          Length = 735

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 gctgcagtagctagtgctgta 574
           |||||||||||||||||||||
Sbjct: 126 gctgcagtagctagtgctgta 146
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>emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 in linkage group 11,
              complete sequence
          Length = 173631

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     acaacatttttattctacaaa 55
              |||||||||||||||||||||
Sbjct: 116515 acaacatttttattctacaaa 116495
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>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence
          Length = 201260

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 711   cccttgacaaaaggtttcctg 731
             |||||||||||||||||||||
Sbjct: 91460 cccttgacaaaaggtttcctg 91440
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>gb|AC144527.3| Homo sapiens BAC clone RP13-932E12 from 2, complete sequence
          Length = 22046

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    aagttatgacaacatttttat 47
             |||||||||||||||||||||
Sbjct: 18095 aagttatgacaacatttttat 18115
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>emb|BX936284.27| Zebrafish DNA sequence from clone DKEY-22A24 in linkage group 3, complete
              sequence
          Length = 224666

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     aacatttttattctacaaaaa 57
              |||||||||||||||||||||
Sbjct: 141508 aacatttttattctacaaaaa 141488
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>emb|BX510992.5| Zebrafish DNA sequence from clone DKEYP-93H6 in linkage group 20,
             complete sequence
          Length = 211650

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    aacatttttattctacaaaaa 57
             |||||||||||||||||||||
Sbjct: 52243 aacatttttattctacaaaaa 52223
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>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3,
             complete sequence
          Length = 117153

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 683   acatcaactcctggaagggcgaagcctgcccttgacaaaag 723
             |||||||| |||||||||  |||||||||||| | ||||||
Sbjct: 39312 acatcaacacctggaaggttgaagcctgccctagtcaaaag 39352
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>emb|CR761157.2| Xenopus tropicalis finished cDNA, clone TEgg061m03
          Length = 1701

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 416  tcaccaaatgatacagtggcagaacccct 444
            |||||||| |||||||| |||||||||||
Sbjct: 1217 tcaccaaaagatacagtagcagaacccct 1189
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>emb|AL935040.6| Zebrafish DNA sequence from clone CH211-176L21, complete sequence
          Length = 159468

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     acaacatttttattctacaaa 55
              |||||||||||||||||||||
Sbjct: 117478 acaacatttttattctacaaa 117458
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>emb|AL772165.15| Mouse DNA sequence from clone RP23-118G3 on chromosome 7, complete
             sequence
          Length = 135330

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   tgggaagcctcggaagtccca 310
             |||||||||||||||||||||
Sbjct: 88787 tgggaagcctcggaagtccca 88807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,189,337
Number of Sequences: 3902068
Number of extensions: 7189337
Number of successful extensions: 133883
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133709
Number of HSP's gapped (non-prelim): 174
length of query: 738
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 715
effective length of database: 17,143,297,704
effective search space: 12257457858360
effective search space used: 12257457858360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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