>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 656

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 323 PSEQLPHGRRSLPTQPQP 376
           PSE LP  RR LPTQ QP
Sbjct: 228 PSESLPRPRRPLPTQQQP 245

>APXL_HUMAN (Q13796) Apical-like protein (APXL protein)|
          Length = 1616

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 353 SLPTQPQPGVGLLPXHHLPXADAPRHAR 436
           +L + P P VG  P HHLP  + P  AR
Sbjct: 503 ALESLPPPTVGQSPRHHLPQPEGPPDAR 530

>PB1_CHICK (Q90941) Protein polybromo-1|
          Length = 1633

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 290  GALRP*HGAPHPSEQLPHGRRSLPTQPQPGV 382
            G+++P H    P  QLP G   +P  P PGV
Sbjct: 1452 GSMQPLHPGVPPPHQLPPGMPGIPGIPPPGV 1482

>CKLF5_HUMAN (Q96DZ9) CKLF-like MARVEL transmembrane domain-containing protein 5|
           (Chemokine-like factor superfamily member 5)
          Length = 223

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 311 GAPHPSEQLPHGRRSLPTQPQPGVGLL-PXHHLPXA 415
           G PHP + L H   S   QPQP  GL  P  H P A
Sbjct: 101 GGPHPLDLLSH---SAKVQPQPWPGLTPPGWHTPAA 133

>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)|
          Length = 967

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 317 PHPSEQLPHGRRSLPTQ-PQPGVGLLPXHHLPXADAP 424
           P PS++LP G+   P++ P P   L P   LP +  P
Sbjct: 446 PSPSQELPPGQELPPSKDPSPSQELPPGQELPSSKNP 482

>J1L_HCMVA (P17143) Hypothetical protein J1L|
          Length = 309

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 317 PHPSEQLPHGRRSLPTQPQ-PGVGLLPXHHLPXADAPRHAR 436
           P P   LP+  R+ P   Q P     P    P +  PRH R
Sbjct: 14  PRPQRNLPYAARTAPAPAQPPSPAPTPSRTPPVSATPRHRR 54

>OTX1_BRARE (Q91994) Homeobox protein OTX1 (ZOTX1)|
          Length = 323

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +2

Query: 287 GGALRP*HGAPHPSEQLPHGRRSLPTQPQPGVGLLPXHH 403
           G  L P H   HP +  P    S+PT P   +     HH
Sbjct: 231 GSYLAPMHSHHHPHQLSPMTASSMPTHPHHHISQSSGHH 269


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,230,019
Number of Sequences: 219361
Number of extensions: 725845
Number of successful extensions: 1839
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)