ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18b04 |
|---|---|
| Clone Library Name | barley_pub |
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 82.4 bits (202), Expect = 8e-16 Identities = 37/53 (69%), Positives = 45/53 (84%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIA 409 TC+TARVYP+HV G+SHLYVFNN + AVKVS L+AWE+ATA+VN DGLI+ Sbjct: 533 TCMTARVYPEHVATGSSHLYVFNNASDAVKVSKLEAWELATASVNAGDDGLIS 585
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 76.6 bits (187), Expect = 4e-14 Identities = 33/46 (71%), Positives = 41/46 (89%) Frame = -2 Query: 564 CITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVL 427 CITARVYP+HV +SHLYVFNNG+ AVKV+ L+AW++ATATVNV+ Sbjct: 530 CITARVYPEHVATSSSHLYVFNNGSDAVKVAKLEAWDLATATVNVV 575
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 74.3 bits (181), Expect = 2e-13 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = -2 Query: 564 CITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVN 433 CIT RVYP+H +SHLYVFNNG+G V VS L+AWEMATATVN Sbjct: 472 CITTRVYPEHAATSSSHLYVFNNGSGTVNVSKLEAWEMATATVN 515
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 61.2 bits (147), Expect = 2e-09 Identities = 28/45 (62%), Positives = 32/45 (71%) Frame = -2 Query: 564 CITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNV 430 CI ARVYP VV+G +H+Y FNNG+ VKVS L AW M A VNV Sbjct: 543 CIMARVYPAAVVDGATHMYAFNNGSSTVKVSQLKAWSMTRAQVNV 587
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVN 433 TCI RVYP V ++HL+VFNNG VKV++LDAWEM T +N Sbjct: 539 TCILTRVYPRKAVGDDAHLFVFNNGESDVKVTNLDAWEMKTPKMN 583
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 57.4 bits (137), Expect = 3e-08 Identities = 23/39 (58%), Positives = 30/39 (76%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEM 451 TCIT+RVYP + N+H++VFNNGT A+ + SLDAW M Sbjct: 545 TCITSRVYPKIAIYNNAHVFVFNNGTEAITIDSLDAWSM 583
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 55.1 bits (131), Expect = 1e-07 Identities = 23/45 (51%), Positives = 29/45 (64%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVN 433 TCI +RVYP + +HLYVFNNG +K+S L AWEM +N Sbjct: 531 TCILSRVYPSMAIGDKAHLYVFNNGEADIKISHLKAWEMKKPLMN 575
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 54.3 bits (129), Expect = 2e-07 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEM 451 TCI++RVYP V N+HLYVFNNG+ + V +LDAW M Sbjct: 547 TCISSRVYPTLAVYENAHLYVFNNGSETITVENLDAWSM 585
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 52.8 bits (125), Expect = 7e-07 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVN 433 TCI +RVYP V ++HLYVFNNG V VS L AWEM +N Sbjct: 544 TCILSRVYPSIAVGKDAHLYVFNNGEVDVTVSGLTAWEMKKPLMN 588
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 52.8 bits (125), Expect = 7e-07 Identities = 22/48 (45%), Positives = 31/48 (64%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLP 424 T IT+R+YP VNG + L+VFNN TGA+ +SL W + +A + P Sbjct: 589 TVITSRIYPTKAVNGAARLFVFNNATGAIVTASLKIWSLESADIRSFP 636
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 51.6 bits (122), Expect = 2e-06 Identities = 22/38 (57%), Positives = 26/38 (68%) Frame = -2 Query: 564 CITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEM 451 CI +RVYP + N+ LYVFNNG +KVS L AWEM Sbjct: 552 CILSRVYPSLAIGKNARLYVFNNGKAEIKVSQLTAWEM 589
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 50.1 bits (118), Expect = 4e-06 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLP 424 T IT+R+YP VNG + L+VFNN TGA +S+ W + +A + P Sbjct: 585 TVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFP 632
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 49.3 bits (116), Expect = 8e-06 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLP 424 TC+T+RVYP + G + L++FNN T A +SL W+M +A + P Sbjct: 595 TCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFP 642
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 48.9 bits (115), Expect = 1e-05 Identities = 20/48 (41%), Positives = 30/48 (62%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLP 424 TC+T+RVYP + G + L++FNN T A +SL W+M +A + P Sbjct: 597 TCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKIWQMNSAFIRPFP 644
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 48.9 bits (115), Expect = 1e-05 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = -2 Query: 561 ITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEM 451 I++RVYP + N+HL+VFNNGT + V +LDAW M Sbjct: 540 ISSRVYPTLAIYNNAHLFVFNNGTEPITVDNLDAWSM 576
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 48.1 bits (113), Expect = 2e-05 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLP 424 T IT+RVYP + + +++FNN TG +S+ AW+MA+AT+ P Sbjct: 610 TVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMASATLKPFP 657
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGA-VKVSSLDAWEMATATVNVLP 424 TCIT+RVYP + ++ +++FNN T A VK S+ W++ +A + P Sbjct: 616 TCITSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPYP 664
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = -2 Query: 567 TCITARVYPDHVVNGNSHLYVFNNGTGAVKVSSLDAWEMATATV 436 TCIT+RVYP + G + L++FNN +SL W+M +A + Sbjct: 587 TCITSRVYPTRAIYGAARLFLFNNAIETNVTASLKVWQMNSAFI 630
>MDTC_ECOLI (P76399) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 513 LYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 394 ++V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 766 MFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805
>MDTC_ECOL6 (Q8FG03) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 513 LYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 394 ++V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 766 MFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805
>MDTC_ECO57 (Q7ACM1) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1025 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 513 LYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 394 ++V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 766 MFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 805
>MDTC_SHIFL (Q83KI4) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1021 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 513 LYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 394 ++V NN A+ +S W+ A A ++V GL AAS++S Sbjct: 762 MFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTIS 801
>MDTC_PHOLL (Q7N3E1) Multidrug resistance protein mdtC (Multidrug transporter| mdtC) Length = 1036 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -2 Query: 561 ITARVYPDHV--VNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVS 394 + V P++ V+ ++V NN A+ +S W+ A A ++V GL AAS+++ Sbjct: 748 VVMEVAPEYTQDVSALEKMFVINNQGKAIPLSYFAHWQPANAPLSVNHQGLSAASTIA 805
>OAZ2_MOUSE (O08608) Ornithine decarboxylase antizyme 2 (ODC-Az 2) (AZ2)| (Seizure-related protein 15) Length = 189 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -2 Query: 534 VVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVSGAQA 382 V +G H+ F VKVSS DA + + +PDGL+A S G A Sbjct: 71 VNDGKPHIVHFQYEVTEVKVSSWDAVLSSQSLFVEIPDGLLADGSKEGLLA 121
>OAZ2_HUMAN (O95190) Ornithine decarboxylase antizyme 2 (ODC-Az 2) (AZ2)| Length = 189 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -2 Query: 534 VVNGNSHLYVFNNGTGAVKVSSLDAWEMATATVNVLPDGLIAASSVSGAQA 382 V +G H+ F VKVSS DA + + +PDGL+A S G A Sbjct: 71 VNDGKPHIVHFQYEVTEVKVSSWDAVLSSQSLFVEIPDGLLADGSKEGLLA 121
>INVO_TARBA (P24711) Involucrin| Length = 387 Score = 30.0 bits (66), Expect = 4.8 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +1 Query: 286 PEPQLGRQIQSAVE--IHNGHPSTERKPSSRILIGLSSAHRARRDQPVGEHVH-GRRRHL 456 PE QLGR+ Q E +H G ++KP + AH ++ +P G+ VH G+++ Sbjct: 78 PELQLGRKQQEPQEQEVHPG--KQQQKPQEQ------EAHLGKKQEPQGQEVHLGKQQQK 129 Query: 457 PRVEAGHL 480 + + HL Sbjct: 130 TQEQEVHL 137
>SYV_STRCO (O06851) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 874 Score = 29.3 bits (64), Expect = 8.1 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 297 LWLRCTNGGSLIVCQNSTEGGF*DAAKEKDCRNI 196 LW T G S+++ + T+ GF DA E++ + Sbjct: 699 LWTTLTGGESVVIAEWPTDSGFRDAGAEREIETV 732 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,218,187 Number of Sequences: 219361 Number of extensions: 1784707 Number of successful extensions: 4707 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4706 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
