ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17m03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 404 bits (204), Expect = e-109 Identities = 273/296 (92%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 ||||| ||||| || || |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 344 aggcacgagtaggcgagagccttctcctccgagagctcctgggctgtggcatccatcttc 285 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 || || |||||||| || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 284 tttcttgagaactcgtcgatcgggagcccttgaacaattgtccattcaccaccgcagcaa 225 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||||||||||||||||||||| |||||||| ||||||||||||||||| || || ||| Sbjct: 224 gttactgggaaggagtagataagcccagcaggcacaccgtatgaaccatcagaatacaca 165 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 164 cccatggaaacaaatgttccctcaggggttccgagaacccaatcacggatgtggtcacaa 105 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 gcagagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 49 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 cttttattcaaaacatcagagc 132 |||||||||||||||||||||| Sbjct: 396 cttttattcaaaacatcagagc 375
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 327 bits (165), Expect = 2e-86 Identities = 270/305 (88%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 214 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 1087 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1028 Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 1027 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 968 Query: 275 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 334 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 967 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 908 Query: 335 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 394 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 907 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 848 Query: 395 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 454 || |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| |||||| Sbjct: 847 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 788 Query: 455 gcagc 459 ||||| Sbjct: 787 gcagc 783
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 327 bits (165), Expect = 2e-86 Identities = 270/305 (88%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 214 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 335 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 276 Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 275 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 216 Query: 275 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 334 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 215 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 156 Query: 335 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 394 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 155 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 96 Query: 395 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 454 || |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| |||||| Sbjct: 95 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 36 Query: 455 gcagc 459 ||||| Sbjct: 35 gcagc 31
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 327 bits (165), Expect = 2e-86 Identities = 270/305 (88%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 214 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 916 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 857 Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 856 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 797 Query: 275 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 334 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 796 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 737 Query: 335 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 394 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 736 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 677 Query: 395 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 454 || |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| |||||| Sbjct: 676 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 617 Query: 455 gcagc 459 ||||| Sbjct: 616 gcagc 612
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 327 bits (165), Expect = 2e-86 Identities = 270/305 (88%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 214 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 1078 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1019 Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 1018 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 959 Query: 275 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 334 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 958 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 899 Query: 335 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 394 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 898 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 839 Query: 395 tgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgatt 454 || |||||||| ||||| ||||| |||||||||||||||| ||| |||||||| |||||| Sbjct: 838 tggtcacaagcagagctagcagccgagagagcactggagaactttctcgctttaatgatt 779 Query: 455 gcagc 459 ||||| Sbjct: 778 gcagc 774
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 305 bits (154), Expect = 7e-80 Identities = 256/290 (88%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1090 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1031 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1030 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 971 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 970 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 911 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| || Sbjct: 910 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 851 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 || |||||||||||||| || |||||||| |||||||||| |||||||| Sbjct: 850 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgat 801
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 305 bits (154), Expect = 7e-80 Identities = 256/290 (88%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1101 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1042 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1041 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 982 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 981 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 922 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| || Sbjct: 921 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 862 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 || |||||||||||||| || |||||||| |||||||||| |||||||| Sbjct: 861 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgat 812
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 297 bits (150), Expect = 2e-77 Identities = 255/290 (87%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1096 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1037 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1036 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 977 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| ||| Sbjct: 976 gttactgggaacgagtagatcagaccagcaggcacaccatacgagccatcagagtacaca 917 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| || Sbjct: 916 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 857 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 || |||||||||||||| || |||||||| |||||||||| |||||||| Sbjct: 856 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgat 807
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 297 bits (150), Expect = 2e-77 Identities = 255/290 (87%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1081 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1022 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1021 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 962 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||| ||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 961 gttaccgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 902 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| || Sbjct: 901 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatcgcat 842 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 || |||||||||||||| || |||||||| |||||||||| |||||||| Sbjct: 841 gcagagctggcagcagatagggcactggattgcttcctcgccttgatgat 792
>gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18 mRNA sequence Length = 360 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 175 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 116 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 115 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 56 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagt 338 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| |||| Sbjct: 55 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagt 1
>gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 386 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 624 Query: 446 ttgatgattgcagc 459 |||||||||||||| Sbjct: 623 ttgatgattgcagc 610
>ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330 mRNA, complete cds Length = 1308 Score = 143 bits (72), Expect = 6e-31 Identities = 240/296 (81%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1111 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1052 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1051 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 992 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 991 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 932 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 931 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 872 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 871 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagc 816
>gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1030 Score = 143 bits (72), Expect = 6e-31 Identities = 240/296 (81%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 992 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 933 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 932 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 873 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 872 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 813 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 812 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 753 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 752 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagc 697
>gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1198 Score = 143 bits (72), Expect = 6e-31 Identities = 240/296 (81%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 885 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 826 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 825 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagc 770
>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410 mRNA, complete cds Length = 1484 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1087 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1028 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 1027 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 968 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 967 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 908 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 907 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 848 Query: 454 tgcagc 459 |||||| Sbjct: 847 tgcagc 842
>gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, complete cds Length = 1005 Score = 139 bits (70), Expect = 9e-30 Identities = 241/298 (80%) Strand = Plus / Minus Query: 162 caaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatct 221 ||||||| |||||||||| || || ||||| || || |||| ||| ||| |||| || Sbjct: 1000 caaggcaggagtaagccaatgctttttcctctgatagttcctcggctgtcaagtccaact 941 Query: 222 tcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgc 281 |||| || |||||||| ||||| || || ||||||||||| | ||| || ||| ||| Sbjct: 940 tctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgc 881 Query: 282 acgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaa 341 | || ||||||||||| || ||||| |||| |||||| |||||| ||||| ||||||| Sbjct: 880 atgtaactgggaaggaataaataagcccagatgggacattgtatgacccatcagagtaaa 821 Query: 342 cacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcac 401 ||||||| |||||||| |||||||| || ||||| || ||||||||||| |||||||||| Sbjct: 820 cacccatagaaacaaaagttccctctggagttccaaggacccagtcacgaatgtgatcac 761 Query: 402 aagctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||| || || ||||| ||||| ||||| || ||||| || |||||||| || ||||| Sbjct: 760 aagcagaactagcagcggagagggcactagaaagctttctagctttgataatggcagc 703
>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 999 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 762 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 703 Query: 454 tgcagc 459 |||||| Sbjct: 702 tgcagc 697
>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds Length = 1223 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 762 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 703 Query: 454 tgcagc 459 |||||| Sbjct: 702 tgcagc 697
>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA, complete cds Length = 1314 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1028 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 969 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 968 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 909 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 908 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 849 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 848 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 789 Query: 454 tgcagc 459 |||||| Sbjct: 788 tgcagc 783
>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 1309 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1024 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 965 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 964 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 905 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 904 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 845 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 844 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 785 Query: 454 tgcagc 459 |||||| Sbjct: 784 tgcagc 779
>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 252 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccactctcc 193 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 192 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 133 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 132 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 73 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 72 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 13 Query: 454 tgcagc 459 |||||| Sbjct: 12 tgcagc 7
>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 317 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 258 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 257 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 198 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 197 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 138 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 137 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 78 Query: 454 tgcagc 459 |||||| Sbjct: 77 tgcagc 72
>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence Length = 1351 Score = 139 bits (70), Expect = 9e-30 Identities = 202/246 (82%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1064 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1005 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 1004 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 945 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 944 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 885 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| ||||||||||| ||||| || | ||||||||| |||||||| Sbjct: 884 gtggtcacaagcagagctagcagcagagagcgcactagacaacttcctcgccttgatgat 825 Query: 454 tgcagc 459 |||||| Sbjct: 824 tgcagc 819
>gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete sequence Length = 1239 Score = 135 bits (68), Expect = 1e-28 Identities = 239/296 (80%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006 Query: 224 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 283 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946 Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 ||||| ||||||||||| ||||| || ||||| | |||||| |||||||| || |||||| Sbjct: 885 cccattgaaacaaatgtgccctcgggtgttccaacaacccaatcacggatatggtcacaa 826 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||||||| || ||||| || ||||| || |||||||| || ||||| || ||||| Sbjct: 825 gctgagctagctgcagaaagtgcactagacagcttcctggccttgataatggcagc 770
>emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene) Length = 999 Score = 123 bits (62), Expect = 5e-25 Identities = 143/170 (84%) Strand = Plus / Minus Query: 290 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 349 |||||||||||||||| ||||| || || |||||| ||||| ||||| |||||||| Sbjct: 866 gggaaggagtagataattccagctggtacgttgtatgagccatcagagtacacacccata 807 Query: 350 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgag 409 ||||| | |||||||| |||||||| || ||||| |||||||||||||||||||| || Sbjct: 806 gaaacccaagttccctctggggttccaagcacccaatcacggatgtgatcacaagcagaa 747 Query: 410 ctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 || ||||| || | ||||||||| |||||||| ||||||||||| ||||| Sbjct: 746 ctagcagctgacaaagcactggaaagcttccttgctttgatgatggcagc 697
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 254 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 313 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 17402292 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17402233 Query: 314 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 365 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 17402232 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17402181 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 17402508 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17402449 Query: 224 ttcctcgagaactcatcaatcgggag 249 ||||| |||||||| || |||||||| Sbjct: 17402448 ttccttgagaactcgtcgatcgggag 17402423 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 363 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 422 ||||||| || || |||||||||||||| |||||||| || || |||||||||||||| | Sbjct: 17402074 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 17402015 Query: 423 gagcactggagagcttcctcgctttgatgat 453 | |||||||| |||||||||| |||||||| Sbjct: 17402014 gggcactggattgcttcctcgccttgatgat 17401984
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 254 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 313 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 31287 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 31228 Query: 314 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 365 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 31227 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 31176 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 31503 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 31444 Query: 224 ttcctcgagaactcatcaatcgggag 249 ||||| |||||||| || |||||||| Sbjct: 31443 ttccttgagaactcgtcgatcgggag 31418 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 363 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 422 ||||||| || || |||||||||||||| |||||||| || || |||||||||||||| | Sbjct: 31069 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 31010 Query: 423 gagcactggagagcttcctcgctttgatgat 453 | |||||||| |||||||||| |||||||| Sbjct: 31009 gggcactggattgcttcctcgccttgatgat 30979
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 254 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 313 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 17411332 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17411273 Query: 314 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 365 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 17411272 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17411221 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 17411548 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17411489 Query: 224 ttcctcgagaactcatcaatcgggag 249 ||||| |||||||| || |||||||| Sbjct: 17411488 ttccttgagaactcgtcgatcgggag 17411463 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 363 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 422 ||||||| || || |||||||||||||| |||||||| || || |||||||||||||| | Sbjct: 17411114 cctcaggagtgccaagaacccagtcacgaatgtgatcgcatgcagagctggcagcagata 17411055 Query: 423 gagcactggagagcttcctcgctttgatgat 453 | |||||||| |||||||||| |||||||| Sbjct: 17411054 gggcactggattgcttcctcgccttgatgat 17411024
>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1) mRNA, complete cds Length = 1491 Score = 115 bits (58), Expect = 1e-22 Identities = 205/254 (80%) Strand = Plus / Minus Query: 206 gcggtcgcatccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtc 265 ||||| || |||| ||||||||| ||||| || ||||| | ||||||||||||||| || Sbjct: 950 gcggttgcgtccaacttcttcctagagaattcgtcaatagagagcccttgaacaatcttc 891 Query: 266 caatcaccaccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtat 325 || || ||| ||| || |||||||| ||||| || ||||||| ||| ||| |||| Sbjct: 890 cactccccattttggcaagtgactgggaatgagtaaatgagaccagaaggaacattgtat 831 Query: 326 gaaccatccgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccag 385 || ||||| ||||| |||||||||||||| | || ||||| |||||||| || ||||| Sbjct: 830 gagccatcagagtacacacccatggaaacccaggtgccctcgggggttccaagtacccaa 771 Query: 386 tcacggatgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgct 445 ||||| |||||||||||||| ||||| |||||||| | || ||||| ||||| | || Sbjct: 770 tcacgaatgtgatcacaagcagagctagcagcagataatgccctggacagcttacgagcc 711 Query: 446 ttgatgattgcagc 459 |||||||||||||| Sbjct: 710 ttgatgattgcagc 697
>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase (mdh gene) Length = 773 Score = 113 bits (57), Expect = 5e-22 Identities = 237/297 (79%) Strand = Plus / Minus Query: 163 aaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatctt 222 |||||| |||||||||| || || |||||||| ||||||| || ||| |||| ||| Sbjct: 546 aaggcaggagtaagccaatgctttttcctccgatagctcctcagctgtcaagtccaactt 487 Query: 223 cttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgca 282 ||| || |||||||| ||||| || || ||||||||||| | ||| || ||| |||| Sbjct: 486 ctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgca 427 Query: 283 cgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaac 342 || ||||||||||| || || || ||||| |||||| |||||| ||||| |||||||| Sbjct: 426 tgtaactgggaaggaataaatgagcccagctgggacattgtatgacccatcagagtaaac 367 Query: 343 acccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcaca 402 |||||| |||||||| || ||||| || ||||| || ||||| || || ||||||||||| Sbjct: 366 acccatagaaacaaaagtaccctctggagttccaaggacccaatcgcgaatgtgatcaca 307 Query: 403 agctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 ||| || || |||||||| ||||| || || ||||| || || ||||| || ||||| Sbjct: 306 agcagaactagcagcagaaagagcgctagaaagctttctagccttgataatggcagc 250
>gb|DQ294258.1| Solanum tuberosum clone 093D06 malate dehydrogenase-like protein mRNA, complete cds Length = 1220 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 290 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 349 |||||||| || ||||| ||||| |||||| |||||| ||||| |||||||||||||| Sbjct: 902 gggaaggaataaataagcccagctgggacattgtatgacccatcagagtaaacacccata 843 Query: 350 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgag 409 |||||||| || ||||| || ||||| || ||||||||||| |||||||||||||| || Sbjct: 842 gaaacaaaagtgccctctggagttccaaggacccagtcacgaatgtgatcacaagcagaa 783 Query: 410 ctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 || ||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct: 782 ctagcagcggaaagggcactagaaagctttctagccttgataatggcagc 733
>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene) Length = 1328 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||| |||||| || |||||||||||||| || || ||||||||||| | ||| || ||| Sbjct: 996 tccaacttctttcttgagaactcatcaattggaagaccttgaacaatagaccattctcca 937 Query: 275 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 334 |||| | ||||||||||| || ||||| ||||| |||||| |||||| ||||| Sbjct: 936 tttttgcatgcaactgggaaggaataaataagcccagctgggacattgtatgacccatca 877 Query: 335 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 394 |||||||||||||| ||||| | |||||||| || ||||| || ||||| ||||| ||| Sbjct: 876 gagtaaacacccatagaaacccaagttccctctggagttccaaggacccaatcacgtatg 817 Query: 395 tgatcacaagc 405 ||||||||||| Sbjct: 816 tgatcacaagc 806
>gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene, complete cds Length = 4649 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 371 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 430 ||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 353 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 294 Query: 431 gagagcttcctcgctttgatgattgcagc 459 || | ||||||||| |||||||||||||| Sbjct: 293 gacaacttcctcgccttgatgattgcagc 265
>gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene, complete cds Length = 4659 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 371 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 430 ||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 360 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 301 Query: 431 gagagcttcctcgctttgatgattgcagc 459 || | ||||||||| |||||||||||||| Sbjct: 300 gacaacttcctcgccttgatgattgcagc 272
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 371 gttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagagagagcactg 430 ||||| || ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 43392 gttccaaggacccagtcacggatgtggtcacaagcagagctagcagcagagagcgcacta 43333 Query: 431 gagagcttcctcgctttgatgattgcagc 459 || | ||||||||| |||||||||||||| Sbjct: 43332 gacaacttcctcgccttgatgattgcagc 43304
>emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase Length = 1273 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Minus Query: 284 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 343 ||||||||||||||||| || | ||||| || ||| ||| || ||||| || || ||| Sbjct: 958 gttactgggaaggagtaaatgattccagctggcacattgtacgagccatcagaatacaca 899 Query: 344 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 403 ||||| || || |||||||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 898 cccatagatacccatgttccctctggggttccaagcacccaatcatggatgtgatcacaa 839 Query: 404 gctgagctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 || || || ||||| || | ||||||||||||||||| || |||||||| ||||| Sbjct: 838 gcagaactagcagctgacaatgcactggagagcttccttgccttgatgatggcagc 783
>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone CanCMDH Length = 1399 Score = 91.7 bits (46), Expect = 2e-15 Identities = 196/246 (79%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||| ||||||||| ||||||||||| |||| || |||||||||||| |||| || || Sbjct: 1008 atccaacttcttccttgagaactcatcgatcgaaagtccttgaacaattttccattcccc 949 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 |||| || || || ||||| || ||||| || ||||| || ||| ||||||||| || Sbjct: 948 accggcacaggtaacagggaatgaatagatcagtccagcgggtacattgtatgaaccgtc 889 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 || || || ||||| |||||||| || |||||||| ||||| |||||||| || || || Sbjct: 888 agaatacactcccattgaaacaaaggtgccctcaggagttccaagaacccaatcgcgaat 829 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| | || |||||||| || ||||| || | ||| || || ||||| || Sbjct: 828 gtggtcacaagcagcactagcagcagatagtgcacttgacaactttctagccttgataat 769 Query: 454 tgcagc 459 |||||| Sbjct: 768 tgcagc 763
>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene) Length = 1353 Score = 91.7 bits (46), Expect = 2e-15 Identities = 196/246 (79%) Strand = Plus / Minus Query: 214 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 273 ||||| ||| ||||| |||||||||||||| || || ||||||||||| | ||| || || Sbjct: 1005 atccaactttttccttgagaactcatcaatgggaagtccttgaacaatcgaccattctcc 946 Query: 274 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 333 | |||| || |||||||| ||||| || | ||||| || ||| ||| || ||||| Sbjct: 945 attcttgcaagtcactgggaatgagtaaattaatccagctggtacattgtacgagccatc 886 Query: 334 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 393 ||||| |||||||||||||| | || ||||| || ||||||| ||||| ||||| || Sbjct: 885 agagtatacacccatggaaacccaggtaccctctggagttcccaagacccaatcacgaat 826 Query: 394 gtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgctttgatgat 453 ||| |||||||| ||||| |||||||| |||||||| || | |||||| || ||||| || Sbjct: 825 gtggtcacaagcagagctagcagcagaaagagcactagaaaacttcctagccttgataat 766 Query: 454 tgcagc 459 ||||| Sbjct: 765 ggcagc 760
>emb|BX841818.1|CNS09Y6C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1075 Score = 87.7 bits (44), Expect = 3e-14 Identities = 142/172 (82%), Gaps = 2/172 (1%) Strand = Plus / Minus Query: 290 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 349 ||||||||||||||||| || | || || | ||| || ||||| ||||| || |||||| Sbjct: 939 gggaaggagtagataagtcctgatggaacgctgtaagagccatcggagtatactcccatg 880 Query: 350 gaaacaaatgttccctcaggggttcccagaaccc-agtcacggatgtgatcac-aagctg 407 ||||| || || ||||| || ||||| || |||| ||||||||||||| |||| |||| | Sbjct: 879 gaaacgaacgtaccctctggagttccaaggaccccagtcacggatgtggtcaccaagcag 820 Query: 408 agctggcagcagagagagcactggagagcttcctcgctttgatgattgcagc 459 |||| ||||||||||| ||||| || | || |||||| |||||||||||||| Sbjct: 819 agctagcagcagagagcgcactagacaactccctcgccttgatgattgcagc 768
>gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence Length = 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggc 207 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| Sbjct: 60 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 8
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 363 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 422 ||||||| ||||| | |||||| |||||||| || |||||||||||||| || ||||| | Sbjct: 7064 cctcaggtgttccaacaacccaatcacggatatggtcacaagctgagctagctgcagaaa 7005 Query: 423 gagcactggagagcttcctcgctttgatgattgcagc 459 | ||||| || |||||||| || ||||| || ||||| Sbjct: 7004 gtgcactagacagcttcctggccttgataatggcagc 6968 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 251 ccttgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagacca 310 ||||||||||| ||||| || ||| | ||| ||||| ||||||||||||||||| ||| Sbjct: 7264 ccttgaacaatggtccactctccattacggcaggttacggggaaggagtagataagtcca 7205 Query: 311 gcagggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 365 || || ||| ||| || ||||| ||||| || ||||| ||||||||||| |||| Sbjct: 7204 gctggaacattgtaggatccatctgagtatactcccattgaaacaaatgtgccct 7150 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 223 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 7544 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 7485 Query: 224 ttcctcga 231 |||||||| Sbjct: 7484 ttcctcga 7477
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 363 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagaga 422 ||||||| ||||| |||||||| ||| | ||||| |||||||| ||||| |||||||| | Sbjct: 7176 cctcaggagttccaagaacccaatcatgaatgtggtcacaagcagagctagcagcagata 7235 Query: 423 gagcactggagagcttcctcgctttgatgattgcagc 459 ||||| || ||||| | ||||| ||||||||||| Sbjct: 7236 atgcacttgaaagctttcgtgctttaatgattgcagc 7272
>gb|AF459646.1| Lupinus albus malate dehydrogenase (MDH2) mRNA, complete cds Length = 1277 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 359 gttccctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagca 418 ||||||||||| ||||| |||||||| || | ||||| |||||||| | || |||||| Sbjct: 848 gttccctcaggagttccaagaacccaatctctaatgtggtcacaagcagcactagcagca 789 Query: 419 gagagagcactggagagcttcctcgctttgatgattgcagc 459 || || ||||| || ||||| || |||||||| |||||||| Sbjct: 788 gatagtgcacttgaaagctttctagctttgataattgcagc 748
>gb|AY485993.1| Pinus pinaster malate dehydrogenase (mdh) mRNA, complete cds Length = 1413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 341 acacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatca 400 |||||||| ||||||||||| |||| ||| || || || ||||| |||||||| ||||| Sbjct: 831 acacccattgaaacaaatgtacccttaggtgtaccaagcacccaatcacggatatgatcg 772 Query: 401 caagctgagctggcagcagagagagcactggagagcttcc 440 || || || || |||||||| || ||||| || ||||||| Sbjct: 771 catgcggaactagcagcagatagtgcactagacagcttcc 732
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence Length = 195006 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 107 gtttcttttattcaaaacatcaga 130 |||||||||||||||||||||||| Sbjct: 131186 gtttcttttattcaaaacatcaga 131163
>gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete cds Length = 1397 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Minus Query: 215 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 274 |||| ||||||||| |||||||||||||| | || |||||||| ||| |||| |||||| Sbjct: 1002 tccaacttcttccttgagaactcatcaattgaaagtccttgaactattttccattcacca 943
>ref|XM_681988.1| PREDICTED: Danio rerio similar to cytosolic malate dehydrogenase B (LOC572887), mRNA Length = 1558 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 738 gcactggagagtttcctggctttgatgactgcagc 704
>gb|AY161295.1| Danio rerio cytosolic malate dehydrogenase B (mdhB) mRNA, complete cds Length = 1048 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 750 gcactggagagtttcctggctttgatgactgcagc 716
>ref|NM_199969.1| Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA Length = 1751 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 862 gcactggagagtttcctggctttgatgactgcagc 828
>emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 in linkage group 17, complete sequence Length = 103820 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 85043 gcactggagagtttcctggctttgatgactgcagc 85077
>gb|BC071512.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:86883 IMAGE:6904389), complete cds Length = 1604 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 763 gcactggagagtttcctggctttgatgactgcagc 729
>gb|BC050508.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:56234 IMAGE:5601379), complete cds Length = 1751 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 862 gcactggagagtttcctggctttgatgactgcagc 828
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17, complete sequence Length = 174580 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 425 gcactggagagcttcctcgctttgatgattgcagc 459 ||||||||||| ||||| |||||||||| |||||| Sbjct: 1357 gcactggagagtttcctggctttgatgactgcagc 1323
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 44.1 bits (22), Expect = 0.40 Identities = 82/102 (80%) Strand = Plus / Minus Query: 362 ccctcaggggttcccagaacccagtcacggatgtgatcacaagctgagctggcagcagag 421 |||| ||| ||||| ||||||||||| | || || |||||||| | || ||||| || Sbjct: 846 ccctgaggagttccaagaacccagtctctaatatggtcacaagcagcactagcagctgat 787 Query: 422 agagcactggagagcttcctcgctttgatgattgcagcgcca 463 || ||||| || ||||| || |||||||| |||||||||||| Sbjct: 786 agtgcacttgaaagctttctagctttgataattgcagcgcca 745 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 164 aggcatgagtaagccagcgccttctcctc 192 |||||||||||||||| ||||||||||| Sbjct: 1044 aggcatgagtaagccaatgccttctcctc 1016
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tggcagcagagagagcactgga 432 |||||||||||||||||||||| Sbjct: 67991 tggcagcagagagagcactgga 67970
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcacaagctgagctggcagca 418 ||||||||||||||||||||| Sbjct: 593932 tcacaagctgagctggcagca 593952
>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence Length = 206903 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 tcagagcatcaactgctcttc 146 ||||||||||||||||||||| Sbjct: 126558 tcagagcatcaactgctcttc 126538
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 atttactcaaggcatgagtaa 175 ||||||||||||||||||||| Sbjct: 505077 atttactcaaggcatgagtaa 505057
>ref|XM_572644.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02140) partial mRNA Length = 6132 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcacaagctgagctggcagca 418 ||||||||||||||||||||| Sbjct: 3427 tcacaagctgagctggcagca 3447
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 gctttgatgattgcagcgcca 463 ||||||||||||||||||||| Sbjct: 2511228 gctttgatgattgcagcgcca 2511248
>ref|XM_636241.1| Dictyostelium discoideum malate dehydrogenase (DDB0230187), partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 6.2 Identities = 56/68 (82%) Strand = Plus / Minus Query: 287 actgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacaccc 346 |||||||| || |||||||||| | || ||||| || |||||||| || ||||||||| Sbjct: 869 actgggaaagaaaagataagaccttctggaacaccataggaaccatcggaataaacaccc 810 Query: 347 atggaaac 354 || ||||| Sbjct: 809 attgaaac 802
>gb|AE008571.1| Rickettsia conorii str. Malish 7, section 3 of 114 of the complete genome Length = 11078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 caaatgttccctcaggggtt 373 |||||||||||||||||||| Sbjct: 1031 caaatgttccctcaggggtt 1012
>gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514 IMAGE:6409425), complete cds Length = 4640 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 728 aggtttcttttattcaaaac 747
>ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), mRNA Length = 4640 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 728 aggtttcttttattcaaaac 747
>gb|BC068420.1| Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:6970634), partial cds Length = 3309 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 gcgccttctcctccgacagctcct 203 |||||||||||||||||| ||||| Sbjct: 2876 gcgccttctcctccgacacctcct 2899
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 123832 aggtttcttttattcaaaac 123851
>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence Length = 188791 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 164232 aggtttcttttattcaaaac 164251
>emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chromosome 13 Contains 2 NADH dehydrogenase pseudogenes and a novel gene, complete sequence Length = 172064 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaacatca 128 |||||||||||||| ||||||||| Sbjct: 166793 aggtttcttttattaaaaacatca 166816
>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete sequence Length = 205508 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgcagctgttctgggtgga 85 |||||||||||||||||||| Sbjct: 41094 gtgcagctgttctgggtgga 41113
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 caaatgttccctcaggggtt 373 |||||||||||||||||||| Sbjct: 2673 caaatgttccctcaggggtt 2654
>emb|BX641152.1|HSM807171 Homo sapiens mRNA; cDNA DKFZp686I13109 (from clone DKFZp686I13109) Length = 8703 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 agctggcagcagagagagca 427 |||||||||||||||||||| Sbjct: 3713 agctggcagcagagagagca 3694
>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence Length = 180948 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 agctgagctggcagcagagagagc 426 ||||||||||| |||||||||||| Sbjct: 93237 agctgagctgggagcagagagagc 93214
>dbj|AK131442.1| Homo sapiens cDNA FLJ16577 fis, clone TESTI2026647, weakly similar to PROBABLE ATP-DEPENDENT RNA HELICASE DDX10 Length = 1848 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 caaatgttccctcaggggtt 373 |||||||||||||||||||| Sbjct: 8 caaatgttccctcaggggtt 27
>gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173237 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gaaacaaatgttccctcagg 369 |||||||||||||||||||| Sbjct: 63391 gaaacaaatgttccctcagg 63410
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 aaggtttcttttattcaaaacatc 127 ||||||||||||||| |||||||| Sbjct: 120506 aaggtttcttttattgaaaacatc 120483
>dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched library, clone:G630093B19 product:phosphorylase kinase beta, full insert sequence Length = 1015 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 723 aggtttcttttattcaaaac 742
>dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730039M10 product:similar to phosphorylase kinase (EC 2.7.1.38) beta chain [Homo sapiens], full insert sequence Length = 1972 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aggtttcttttattcaaaac 124 |||||||||||||||||||| Sbjct: 766 aggtttcttttattcaaaac 785
>dbj|AB208182.1| Elephas maximus DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agagcactggagagcttcct 441 |||||||||||||||||||| Sbjct: 113 agagcactggagagcttcct 132
>dbj|AB208181.1| Loxodonta africana DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 agagcactggagagcttcct 441 |||||||||||||||||||| Sbjct: 113 agagcactggagagcttcct 132
>gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76354 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 caaatgttccctcaggggtt 373 |||||||||||||||||||| Sbjct: 8342 caaatgttccctcaggggtt 8323
>gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221910 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gaaacaaatgttccctcagg 369 |||||||||||||||||||| Sbjct: 10006 gaaacaaatgttccctcagg 9987
>gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192774 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 agctggcagcagagagagca 427 |||||||||||||||||||| Sbjct: 157456 agctggcagcagagagagca 157437
>gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, complete sequence Length = 37581 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tcgcatccatcttcttcctc 229 |||||||||||||||||||| Sbjct: 6104 tcgcatccatcttcttcctc 6123
>dbj|AB115700.1| Cryptococcus diffluens DNA, intergenic spacer 1 region Length = 603 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aatcaccaccgctgcacgtt 286 |||||||||||||||||||| Sbjct: 461 aatcaccaccgctgcacgtt 442
>gb|AY725475.1| Lycopersicon esculentum cytosolic malate dehydrogenase (cMDH) mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 377 agaacccagtcacggatgtgatcacaagctgagctggcagcaga 420 |||||||| ||| | || ||||||||||||||||| || ||||| Sbjct: 785 agaacccaatcatgtatatgatcacaagctgagctagctgcaga 742
>gb|AF075269.1|AF075269 Simian immunodeficiency virus strain SIVlhoest, complete genome Length = 9957 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 agcagagagagcactggaga 434 |||||||||||||||||||| Sbjct: 2500 agcagagagagcactggaga 2519
>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete sequence Length = 195409 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 gcagagagagcactggagagcttc 439 |||||||||| ||||||||||||| Sbjct: 130816 gcagagagaggactggagagcttc 130793
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 gcagagagagcactggagagcttc 439 |||||||||| ||||||||||||| Sbjct: 4878 gcagagagaggactggagagcttc 4855
>gb|L41699.1|PS300585E Eucalyptus globulus bicostata symbiont (F00064) mRNA, ESTun585 Length = 194 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 392 atgtgatcacaagctgagctggcagcagagagagcactggagagcttcctcgcttt 447 ||||| |||||||| | ||||||||||| || ||||| || |||||||| ||||| Sbjct: 194 atgtggtcacaagcagcactggcagcagaaagtgcacttgaaagcttcctagcttt 139
>gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env gene, partial cds (a11) Length = 396 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ttattcaaaacatcagagca 133 |||||||||||||||||||| Sbjct: 206 ttattcaaaacatcagagca 187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,193,457 Number of Sequences: 3902068 Number of extensions: 4193457 Number of successful extensions: 122808 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122547 Number of HSP's gapped (non-prelim): 225 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
