Clone Name | rbasd17m01 |
---|---|
Clone Library Name | barley_pub |
>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 35.0 bits (79), Expect = 0.043 Identities = 18/34 (52%), Positives = 19/34 (55%) Frame = -2 Query: 404 AFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGE 303 AFRPLV+K AHLKLSELGF E Sbjct: 217 AFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/34 (52%), Positives = 19/34 (55%) Frame = -2 Query: 401 FRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 300 FRPLV+K AHLKLSELGF EA Sbjct: 216 FRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 249
>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = -2 Query: 404 AFRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 300 AFRPLV+K AHLKLSELGF +A Sbjct: 215 AFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 249
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -2 Query: 401 FRPLVDKXXXXXXXXXXXXXXAHLKLSELGFGEA 300 FRPLV+K AH+KLSELGF +A Sbjct: 216 FRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 249
>LOXL4_HUMAN (Q96JB6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 4) (Lysyl oxidase-related protein C) Length = 756 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 57 LQDRSITRYEASKAKQCXTPSTDRSNPNPDKHMTWPLGRRQIL 185 L+DR +++ + + C + S D HM WP G R++L Sbjct: 548 LEDRPLSQLYCAHEENCLSKSAD--------HMDWPYGYRRLL 582
>LOXL4_MOUSE (Q924C6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 4) (Lysyl oxidase-related protein C) Length = 757 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 57 LQDRSITRYEASKAKQCXTPSTDRSNPNPDKHMTWPLGRRQIL 185 L+DR ++ + + C + S D HM WP G R++L Sbjct: 549 LEDRPLSMLYCAHEENCLSKSAD--------HMDWPYGYRRLL 583
>SYFB_LEIXX (Q6AGD6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 847 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 6 TGEKQPGKELHNT*RFTLQDRSITRYEASKAKQ 104 TG K L RF DR++T EAS+AKQ Sbjct: 799 TGLPDSSKSLTFALRFRADDRTLTAAEASEAKQ 831 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.129 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,877,575 Number of Sequences: 219361 Number of extensions: 564698 Number of successful extensions: 952 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 952 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)