Clone Name	rbasd18a22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, ...	246	5e-62
2	dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clon...	236	5e-59
3	dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clon...	236	5e-59
4	dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clon...	236	5e-59
5	dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clon...	236	5e-59
6	dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clon...	228	1e-56
7	dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clon...	228	1e-56
8	gb|BT016431.1| Zea mays clone Contig264 mRNA sequence	206	4e-50
9	gb|BT016876.1| Zea mays clone Contig709 mRNA sequence	143	5e-31
10	gb|AY106684.1| Zea mays PCO086432 mRNA sequence	143	5e-31
11	gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome...	127	3e-26
12	gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome...	127	3e-26
13	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	127	3e-26
14	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	127	3e-26
15	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	125	1e-25
16	gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome...	125	1e-25
17	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	125	1e-25
18	gb|BT016340.1| Zea mays clone Contig173 mRNA sequence	105	1e-19
19	gb|AY105823.1| Zea mays PCO145462 mRNA sequence	105	1e-19
20	emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal prote...	100	7e-18
21	gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence	86	1e-13
22	emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22...	84	4e-13
23	emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 ...	72	2e-09
24	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	70	6e-09
25	dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963	70	6e-09
26	dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020	70	6e-09
27	gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete seq...	66	1e-07
28	gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome...	64	4e-07
29	gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA	60	6e-06
30	gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence	58	2e-05
31	ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal prot...	54	4e-04
32	gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 ma...	52	0.001
33	ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothe...	52	0.001
34	dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.001
35	gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, com...	50	0.006
36	gb|AY193430.1| Lactuca saligna genotype PI491204 40S ribosomal p...	50	0.006
37	gb|AY193429.1| Lactuca saligna genotype CGN9311 40S ribosomal pr...	50	0.006
38	gb|AY193428.1| Lactuca saligna genotype US93UC10 40S ribosomal p...	50	0.006
39	gb|AY193427.1| Lactuca serriola genotype W66336A 40S ribosomal p...	50	0.006
40	gb|AY193426.1| Lactuca sativa cultivar Mariska 40S ribosomal pro...	50	0.006
41	gb|AY193425.1| Lactuca sativa cultivar Calmar 40S ribosomal prot...	50	0.006
42	gb|AY193424.1| Lactuca sativa cultivar Diana 40S ribosomal prote...	50	0.006
43	ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribo...	48	0.023
44	gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence	46	0.092
45	gb|AY221154.1| Volvariella volvacea clone Cor4 cold-induced gene...	46	0.092
46	ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal ...	44	0.36
47	ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal ...	44	0.36
48	ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal ...	44	0.36
49	ref|XM_959140.1| Neurospora crassa OR74A hypothetical protein (N...	44	0.36
50	ref|XM_329138.1| Neurospora crassa OR74A hypothetical protein (N...	44	0.36
51	ref|XM_455020.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23749g ...	44	0.36
52	ref|XM_455021.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23760g ...	44	0.36
53	emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...	44	0.36
54	gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interv...	44	0.36
55	gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	44	0.36
56	ref|NM_209959.1| Eremothecium gossypii AEL255Wp (AEL255W), mRNA	44	0.36
57	gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (C...	44	0.36
58	gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr...	42	1.4
59	ref|XM_749816.1| Aspergillus fumigatus Af293 cytosolic small rib...	42	1.4
60	ref|XM_570885.1| Cryptococcus neoformans var. neoformans JEC21 h...	42	1.4
61	emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on ch...	42	1.4
62	gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromo...	42	1.4
63	gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, comp...	42	1.4
64	ref|NM_102817.1| Arabidopsis thaliana unknown protein AT1G30800 ...	40	5.7
65	ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal ...	40	5.7
66	ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal ...	40	5.7
67	gb|AY692728.1| Saccharomyces cerevisiae clone FLH158303.01X YLR4...	40	5.7
68	gb|BT012401.1| Arabidopsis thaliana At1g30800 mRNA, complete cds	40	5.7
69	gb|BT011773.1| Arabidopsis thaliana At1g30800 mRNA, complete cds	40	5.7
70	ref|XM_809245.1| Trypanosoma cruzi strain CL Brener hypothetical...	40	5.7
71	gb|AY326266.1| Gallus gallus ATP-binding cassette sub-family A m...	40	5.7
72	emb|AL031644.1|SPCC613 S.pombe chromosome III cosmid c613	40	5.7
73	gb|AF447343.1| Nectarinia senegalensis cytochrome c oxidase subu...	40	5.7
74	ref|NM_001022686.1| Schizosaccharomyces pombe 972h- hypothetical...	40	5.7
75	gb|AC097652.2| Homo sapiens BAC clone RP11-138B4 from 4, complet...	40	5.7
76	gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, co...	40	5.7
77	gb|DQ108802.1| Arabidopsis thaliana clone 256155 mRNA sequence	40	5.7
78	gb|AC128650.6| Homo sapiens 3 BAC RP11-373L8 (Roswell Park Cance...	40	5.7
79	gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana...	40	5.7
80	emb|AJ341691.1|HSA341691 Homo sapiens genomic sequence surroundi...	40	5.7
81	emb|AJ341475.1|HSA341475 Homo sapiens genomic sequence surroundi...	40	5.7
82	emb|AJ341863.1|HSA341863 Homo sapiens genomic sequence surroundi...	40	5.7
83	gb|BC082895.1| Xenopus laevis hypothetical LOC494780, mRNA (cDNA...	40	5.7
84	gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosom...	40	5.7
85	emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chr...	40	5.7
86	gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XII cos...	40	5.7
87	gb|BC108444.1| Xenopus laevis cDNA clone IMAGE:7980441, containi...	40	5.7
88	emb|AJ342190.1|HSA342190 Homo sapiens genomic sequence surroundi...	40	5.7
89	emb|AJ342181.1|HSA342181 Homo sapiens genomic sequence surroundi...	40	5.7

---

>gb|AF475098.1| Triticum aestivum 40S ribosomal protein S9 mRNA, partial cds
          Length = 210

 Score =  246 bits (124), Expect = 5e-62
 Identities = 185/207 (89%), Gaps = 1/207 (0%)
 Strand = Plus / Minus

                                                                       
Query: 149 tcattcctcttcctcatcaccaccagcgtcncnnccaccacttgccttcttctggttctt 208
           ||||||||||||||| |||||||| || || |  ||||||||||||||||||||||||||
Sbjct: 210 tcattcctcttcctcgtcaccacctgcatcgccaccaccacttgccttcttctggttctt 151

                                                                       
Query: 209 cctctncaccctgnntttngn-cctccaccgaatggacttgtcagtgagaagtcaatgtg 267
            |||| ||||| |  |   |  ||||| |||||||||||||||||||||||||| |||||
Sbjct: 150 tctcttcacccggcctgcagggcctccgccgaatggacttgtcagtgagaagtcgatgtg 91

                                                                       
Query: 268 cttntcagattcaaccctcaccatgaatgaggggacattgacgatctgcctgccaaccct 327
           ||| || |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 90  cttctcggattcaaccctcaccatgaacgacgggacattgacgatctgcctgccaaccct 31

                                      
Query: 328 gatgtggcgttgcctgatcaagacacg 354
           |||||||||||||||||||||||||||
Sbjct: 30  gatgtggcgttgcctgatcaagacacg 4

---

>dbj|AK104761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H02, full
           insert sequence
          Length = 884

 Score =  236 bits (119), Expect = 5e-59
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 570 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 511

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 510 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 451

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 450 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 391

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 390 cttgcgaggaagt 378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 186 ccacttgccttcttctggttcttcctctncaccct 220
           |||||||||||||||||||||||||||| ||||||
Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccct 581

---

>dbj|AK104265.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G01, full
           insert sequence
          Length = 884

 Score =  236 bits (119), Expect = 5e-59
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 570 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 511

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 510 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 451

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 450 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 391

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 390 cttgcgaggaagt 378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 186 ccacttgccttcttctggttcttcctctncaccct 220
           |||||||||||||||||||||||||||| ||||||
Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccct 581

---

>dbj|AK104111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G08, full
           insert sequence
          Length = 970

 Score =  236 bits (119), Expect = 5e-59
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 573 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 514

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 513 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 454

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 453 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 394

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 393 cttgcgaggaagt 381



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 186 ccacttgccttcttctggttcttcctctncaccct 220
           |||||||||||||||||||||||||||| ||||||
Sbjct: 618 ccacttgccttcttctggttcttcctcttcaccct 584

---

>dbj|AK061350.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F09, full
           insert sequence
          Length = 972

 Score =  236 bits (119), Expect = 5e-59
 Identities = 173/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 570 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 511

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 510 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 451

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 450 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 391

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 390 cttgcgaggaagt 378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 186 ccacttgccttcttctggttcttcctctncaccct 220
           |||||||||||||||||||||||||||| ||||||
Sbjct: 615 ccacttgccttcttctggttcttcctcttcaccct 581

---

>dbj|AK104660.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D11, full
           insert sequence
          Length = 955

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 580 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 521

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 520 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 461

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 460 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 401

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 400 cttgcgaggaagt 388



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 189 cttgccttcttctggttcttcctctncaccct 220
           ||||||||||||||||||||||||| ||||||
Sbjct: 622 cttgccttcttctggttcttcctcttcaccct 591

---

>dbj|AK072671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P20, full
           insert sequence
          Length = 964

 Score =  228 bits (115), Expect = 1e-56
 Identities = 172/193 (89%)
 Strand = Plus / Minus

                                                                       
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
           |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 569 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 510

                                                                       
Query: 290 atgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaag 349
           ||||| || ||||  ||||| || |||||||| ||||||||||||||||||||||||| |
Sbjct: 509 atgaacgacgggatgttgacaatttgcctgccgaccctgatgtggcgttgcctgatcagg 450

                                                                       
Query: 350 acacggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcgc 409
           |||||  |||||||||||||||| |||||||||  ||||||||||| ||| ||||| |||
Sbjct: 449 acacgagcatggtggatggacttggccatgccagccttgaagacaagagtctgaagacgc 390

                        
Query: 410 cttgcaaggaagt 422
           ||||| |||||||
Sbjct: 389 cttgcgaggaagt 377



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 189 cttgccttcttctggttcttcctctncaccct 220
           ||||||||||||||||||||||||| ||||||
Sbjct: 611 cttgccttcttctggttcttcctcttcaccct 580

---

>gb|BT016431.1| Zea mays clone Contig264 mRNA sequence
          Length = 866

 Score =  206 bits (104), Expect = 4e-50
 Identities = 205/241 (85%), Gaps = 1/241 (0%)
 Strand = Plus / Minus

                                                                       
Query: 183 ccaccacttgccttcttctggttcttcctctncaccctgnntttngn-cctccaccgaat 241
           ||||| |||||||||||||| ||||| |||| ||||||   |   |  ||||||||||||
Sbjct: 632 ccaccgcttgccttcttctgattctttctcttcacccttcctgcggggcctccaccgaat 573

                                                                       
Query: 242 ggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaatgagggg 301
           || |||| |||||| |||||||||||||| ||||| || ||||||||||||||||| |||
Sbjct: 572 gggcttgacagtgaaaagtcaatgtgcttctcagactccaccctcaccatgaatgatggg 513

                                                                       
Query: 302 acattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatgg 361
           || ||||| || |||||||||||||||||||| || ||| |||||||||||||  |||||
Sbjct: 512 acgttgacaatttgcctgccaaccctgatgtgacgctgcttgatcaagacacgagcatgg 453

                                                                       
Query: 362 tggatggactttgccatgccanncttgaagacaanagtntgaaggcgccttgcaaggaag 421
           || |||||||| |||||||||  |||||||||||  || ||||| |||||||| ||||||
Sbjct: 452 tgaatggacttggccatgccagccttgaagacaagtgtttgaagccgccttgcgaggaag 393

            
Query: 422 t 422
           |
Sbjct: 392 t 392

---

>gb|BT016876.1| Zea mays clone Contig709 mRNA sequence
          Length = 969

 Score =  143 bits (72), Expect = 5e-31
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                       
Query: 254 gagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatc 313
           |||||||| |||||||| || ||||| ||||| |||||||| |||||||  ||||||| |
Sbjct: 425 gagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacgagc 484

                                                                       
Query: 314 tgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtggatggacttt 373
           ||||| || |||||||||||||| |||||||||| ||||||  |||||||||||||||| 
Sbjct: 485 tgccttcccaccctgatgtggcgctgcctgatcaggacacgagcatggtggatggacttg 544

                               
Query: 374 gccatgccanncttgaagac 393
           |||||||||  |||||||||
Sbjct: 545 gccatgccattcttgaagac 564



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 192 gccttcttctggttcttcctctncaccct 220
           ||||||||||||||||||| || ||||||
Sbjct: 362 gccttcttctggttcttccgcttcaccct 390

---

>gb|AY106684.1| Zea mays PCO086432 mRNA sequence
          Length = 965

 Score =  143 bits (72), Expect = 5e-31
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                       
Query: 254 gagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatc 313
           |||||||| |||||||| || ||||| ||||| |||||||| |||||||  ||||||| |
Sbjct: 590 gagaagtcgatgtgcttctctgattcgaccctgaccatgaacgaggggatgttgacgagc 531

                                                                       
Query: 314 tgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtggatggacttt 373
           ||||| || |||||||||||||| |||||||||| ||||||  |||||||||||||||| 
Sbjct: 530 tgccttcccaccctgatgtggcgctgcctgatcaggacacgagcatggtggatggacttg 471

                               
Query: 374 gccatgccanncttgaagac 393
           |||||||||  |||||||||
Sbjct: 470 gccatgccattcttgaagac 451



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 192 gccttcttctggttcttcctctncaccct 220
           ||||||||||||||||||| || ||||||
Sbjct: 653 gccttcttctggttcttccgcttcaccct 625

---

>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score =  127 bits (64), Expect = 3e-26
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 230   cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
             |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 12869 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 12928

                                                    
Query: 290   atgaatgaggggacattgacgatctgcctgccaaccctg 328
             |||||||| ||||  ||||| || |||||||| ||||||
Sbjct: 12929 atgaatgatgggatgttgacaatttgcctgccgaccctg 12967



 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                        
Query: 325  cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
            ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 9099 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 9158

                                                  
Query: 385  cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
            ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 9159 cttgaagacaagagtctgaagacgccttgcgaggaagt 9196



 Score =  117 bits (59), Expect = 3e-23
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 325   cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
             ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 13858 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 13917

                                           
Query: 385   cttgaagacaanagtntgaaggcgccttgc 414
             ||||||||||| ||| ||||| ||||||||
Sbjct: 13918 cttgaagacaagagtctgaagacgccttgc 13947



 Score =  111 bits (56), Expect = 2e-21
 Identities = 88/99 (88%)
 Strand = Plus / Plus

                                                                        
Query: 230  cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
            |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 8188 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 8247

                                                   
Query: 290  atgaatgaggggacattgacgatctgcctgccaaccctg 328
            ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 8248 atgaacgacgggatgttgacaatttgcctgccgaccctg 8286



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 189  cttgccttcttctggttcttcctctncaccct 220
            ||||||||||||||||||||||||| ||||||
Sbjct: 8146 cttgccttcttctggttcttcctcttcaccct 8177



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 189   cttgccttcttctggttcttcctctncaccct 220
             |||||||||||||||||||||| || ||||||
Sbjct: 12827 cttgccttcttctggttcttccgcttcaccct 12858

---

>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score =  127 bits (64), Expect = 3e-26
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                          
Query: 230    cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
              |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 124387 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 124446

                                                     
Query: 290    atgaatgaggggacattgacgatctgcctgccaaccctg 328
              |||||||| ||||  ||||| || |||||||| ||||||
Sbjct: 124447 atgaatgatgggatgttgacaatttgcctgccgaccctg 124485



 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                          
Query: 325    cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
              ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 120617 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 120676

                                                    
Query: 385    cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
              ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 120677 cttgaagacaagagtctgaagacgccttgcgaggaagt 120714



 Score =  117 bits (59), Expect = 3e-23
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                          
Query: 325    cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
              ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 125376 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 125435

                                            
Query: 385    cttgaagacaanagtntgaaggcgccttgc 414
              ||||||||||| ||| ||||| ||||||||
Sbjct: 125436 cttgaagacaagagtctgaagacgccttgc 125465



 Score =  111 bits (56), Expect = 2e-21
 Identities = 88/99 (88%)
 Strand = Plus / Plus

                                                                          
Query: 230    cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
              |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 119706 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 119765

                                                     
Query: 290    atgaatgaggggacattgacgatctgcctgccaaccctg 328
              ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 119766 atgaacgacgggatgttgacaatttgcctgccgaccctg 119804



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 189    cttgccttcttctggttcttcctctncaccct 220
              ||||||||||||||||||||||||| ||||||
Sbjct: 119664 cttgccttcttctggttcttcctcttcaccct 119695



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 189    cttgccttcttctggttcttcctctncaccct 220
              |||||||||||||||||||||| || ||||||
Sbjct: 124345 cttgccttcttctggttcttccgcttcaccct 124376

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  127 bits (64), Expect = 3e-26
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                            
Query: 230      cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
                |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 22328429 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 22328370

                                                       
Query: 290      atgaatgaggggacattgacgatctgcctgccaaccctg 328
                |||||||| ||||  ||||| || |||||||| ||||||
Sbjct: 22328369 atgaatgatgggatgttgacaatttgcctgccgaccctg 22328331



 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 325      cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
                ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 22332199 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22332140

                                                      
Query: 385      cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
                ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 22332139 cttgaagacaagagtctgaagacgccttgcgaggaagt 22332102



 Score =  117 bits (59), Expect = 3e-23
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                            
Query: 325      cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
                ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 22327440 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22327381

                                              
Query: 385      cttgaagacaanagtntgaaggcgccttgc 414
                ||||||||||| ||| ||||| ||||||||
Sbjct: 22327380 cttgaagacaagagtctgaagacgccttgc 22327351



 Score =  111 bits (56), Expect = 2e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 230      cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
                |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 22333110 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 22333051

                                                       
Query: 290      atgaatgaggggacattgacgatctgcctgccaaccctg 328
                ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 22333050 atgaacgacgggatgttgacaatttgcctgccgaccctg 22333012



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 97/118 (82%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                            
Query: 246      ttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacat 305
                |||| |||||||||||||||||||| | ||| ||||||||||  |||||||| ||||   
Sbjct: 19413080 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 19413139

                                                                          
Query: 306      tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtg 363
                |||  || || ||| |||| || |||||| ||||||| |||||||||||  |||||||
Sbjct: 19413140 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 19413196



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 189      cttgccttcttctggttcttcctctncaccct 220
                ||||||||||||||||||||||||| ||||||
Sbjct: 22333152 cttgccttcttctggttcttcctcttcaccct 22333121



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 189      cttgccttcttctggttcttcctctncaccct 220
                |||||||||||||||||||||| || ||||||
Sbjct: 22328471 cttgccttcttctggttcttccgcttcaccct 22328440

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  127 bits (64), Expect = 3e-26
 Identities = 90/99 (90%)
 Strand = Plus / Minus

                                                                            
Query: 230      cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
                |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 22638340 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 22638281

                                                       
Query: 290      atgaatgaggggacattgacgatctgcctgccaaccctg 328
                |||||||| ||||  ||||| || |||||||| ||||||
Sbjct: 22638280 atgaatgatgggatgttgacaatttgcctgccgaccctg 22638242



 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 325      cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
                ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 22642110 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22642051

                                                      
Query: 385      cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
                ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 22642050 cttgaagacaagagtctgaagacgccttgcgaggaagt 22642013



 Score =  117 bits (59), Expect = 3e-23
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                            
Query: 325      cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
                ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 22637351 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 22637292

                                              
Query: 385      cttgaagacaanagtntgaaggcgccttgc 414
                ||||||||||| ||| ||||| ||||||||
Sbjct: 22637291 cttgaagacaagagtctgaagacgccttgc 22637262



 Score =  111 bits (56), Expect = 2e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 230      cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
                |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 22643021 cctccaccgaatgggcttgtcagtgagaagtcaatgtgtttctcagactcaaccctcacc 22642962

                                                       
Query: 290      atgaatgaggggacattgacgatctgcctgccaaccctg 328
                ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 22642961 atgaacgacgggatgttgacaatttgcctgccgaccctg 22642923



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 97/118 (82%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                            
Query: 246      ttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacat 305
                |||| |||||||||||||||||||| | ||| ||||||||||  |||||||| ||||   
Sbjct: 19572629 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 19572688

                                                                          
Query: 306      tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtg 363
                |||  || || ||| |||| || |||||| ||||||| |||||||||||  |||||||
Sbjct: 19572689 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 19572745



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 189      cttgccttcttctggttcttcctctncaccct 220
                ||||||||||||||||||||||||| ||||||
Sbjct: 22643063 cttgccttcttctggttcttcctcttcaccct 22643032



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 189      cttgccttcttctggttcttcctctncaccct 220
                |||||||||||||||||||||| || ||||||
Sbjct: 22638382 cttgccttcttctggttcttccgcttcaccct 22638351

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                           
Query: 325     cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
               ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 2969541 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 2969482

                                                     
Query: 385     cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
               ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 2969481 cttgaagacaagagtctgaagacgccttgcgaggaagt 2969444



 Score =  119 bits (60), Expect = 8e-24
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                           
Query: 230     cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
               |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 2970511 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 2970452

                                                      
Query: 290     atgaatgaggggacattgacgatctgcctgccaaccctg 328
               ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 2970451 atgaacgacgggatgttgacaatttgcctgccgaccctg 2970413



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                  
Query: 186     ccacttgccttcttctggttcttcctctncaccct 220
               |||||||||||||||||||||||||||| ||||||
Sbjct: 2970556 ccacttgccttcttctggttcttcctcttcaccct 2970522

---

>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15,
              complete sequence
          Length = 166282

 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 325    cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
              ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 107028 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 106969

                                                    
Query: 385    cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
              ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 106968 cttgaagacaagagtctgaagacgccttgcgaggaagt 106931



 Score =  119 bits (60), Expect = 8e-24
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                          
Query: 230    cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
              |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 107998 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 107939

                                                     
Query: 290    atgaatgaggggacattgacgatctgcctgccaaccctg 328
              ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 107938 atgaacgacgggatgttgacaatttgcctgccgaccctg 107900



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 186    ccacttgccttcttctggttcttcctctncaccct 220
              |||||||||||||||||||||||||||| ||||||
Sbjct: 108043 ccacttgccttcttctggttcttcctcttcaccct 108009

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                           
Query: 325     cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
               ||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||  
Sbjct: 2969652 cctgatgtggcgttgcctgatcaggacacgagcatggtggatggacttggccatgccagc 2969593

                                                     
Query: 385     cttgaagacaanagtntgaaggcgccttgcaaggaagt 422
               ||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 2969592 cttgaagacaagagtctgaagacgccttgcgaggaagt 2969555



 Score =  119 bits (60), Expect = 8e-24
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                           
Query: 230     cctccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcacc 289
               |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 2970622 cctccaccgaatgggcttgtcagtgagaagtcaatgtgcttctcagactcaaccctcacc 2970563

                                                      
Query: 290     atgaatgaggggacattgacgatctgcctgccaaccctg 328
               ||||| || ||||  ||||| || |||||||| ||||||
Sbjct: 2970562 atgaacgacgggatgttgacaatttgcctgccgaccctg 2970524



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                  
Query: 186     ccacttgccttcttctggttcttcctctncaccct 220
               |||||||||||||||||||||||||||| ||||||
Sbjct: 2970667 ccacttgccttcttctggttcttcctcttcaccct 2970633

---

>gb|BT016340.1| Zea mays clone Contig173 mRNA sequence
          Length = 806

 Score =  105 bits (53), Expect = 1e-19
 Identities = 128/155 (82%)
 Strand = Plus / Minus

                                                                       
Query: 254 gagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatc 313
           |||||||| |||||||| || || ||||| ||||||||||||||||| |  ||||| |  
Sbjct: 564 gagaagtcgatgtgcttctctgagtcaactctcaccatgaatgagggaatgttgacaagt 505

                                                                       
Query: 314 tgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtggatggacttt 373
           ||||| ||||| || ||||||||||||||||| |  |||||  | || || |||||||| 
Sbjct: 504 tgcctcccaactctaatgtggcgttgcctgatgagcacacgagcgtgatgaatggacttc 445

                                              
Query: 374 gccatgccanncttgaagacaanagtntgaaggcg 408
           |||||||||  ||||||||||| ||| ||||||||
Sbjct: 444 gccatgccattcttgaagacaatagtctgaaggcg 410

---

>gb|AY105823.1| Zea mays PCO145462 mRNA sequence
          Length = 959

 Score =  105 bits (53), Expect = 1e-19
 Identities = 128/155 (82%)
 Strand = Plus / Minus

                                                                       
Query: 254 gagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatc 313
           |||||||| |||||||| || || ||||| ||||||||||||||||| |  ||||| |  
Sbjct: 573 gagaagtcgatgtgcttctctgagtcaactctcaccatgaatgagggaatgttgacaagt 514

                                                                       
Query: 314 tgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtggatggacttt 373
           ||||| ||||| || ||||||||||||||||| |  |||||  |||| || |||||||| 
Sbjct: 513 tgcctcccaactctaatgtggcgttgcctgatgagcacacgagcatgatgaatggacttc 454

                                              
Query: 374 gccatgccanncttgaagacaanagtntgaaggcg 408
           |||||||||  |||||||||||  || ||||||||
Sbjct: 453 gccatgccattcttgaagacaatggtctgaaggcg 419

---

>emb|AJ749993.1| Catharanthus roseus mRNA for 40S ribosomal protein S9 (rps9 gene)
          Length = 939

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 233 ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
           |||||||| |||||||| | |||||||||||||||||| | ||| ||||| || ||||||
Sbjct: 595 ccaccgaagggacttgtaattgagaagtcaatgtgcttctgagagtcaactctaaccatg 536

                                                                       
Query: 293 aatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagaca 352
           || || || |||||||| | |||| | |||||||| ||||| | |||||| || |  || 
Sbjct: 535 aaggaaggaacattgacaacctgctttccaacccttatgtgcctttgcctaatgagcact 476

                                                                   
Query: 353 cggncatggtggatggactttgccatgccanncttgaagacaanagtntgaaggcg 408
           | | |||||||||| ||||||||||| |||  |||||| ||||  || ||||||||
Sbjct: 475 ctggcatggtggattgactttgccatcccagacttgaaaacaagggtttgaaggcg 420

---

>gb|BT013198.1| Lycopersicon esculentum clone 134354R, mRNA sequence
          Length = 963

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 132/163 (80%)
 Strand = Plus / Minus

                                                                       
Query: 233 ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
           ||||| || ||||| || || ||||| ||||||||||| | ||| || || |||||||||
Sbjct: 581 ccaccaaaaggactggttagagagaaatcaatgtgcttctgagagtcgactctcaccatg 522

                                                                       
Query: 293 aatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagaca 352
           ||||| |  ||||| ||||  ||||| |||||||||||||| | ||||||||| |  || 
Sbjct: 521 aatgaagcaacattcacgacttgccttccaaccctgatgtgcctttgcctgatgagcact 462

                                                      
Query: 353 cggncatggtggatggactttgccatgccanncttgaagacaa 395
           |   |||||||||| ||||| |||||||||  |||||||||||
Sbjct: 461 ctcgcatggtggattgacttggccatgccagtcttgaagacaa 419

---

>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3,
             complete sequence
          Length = 134390

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                         
Query: 233   ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
             ||||||||||||||||| ||||| |||||||||||||| |  || |||||||| ||||||
Sbjct: 16949 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 17008

                                                      
Query: 293   aatgaggggacattgacgatctgcctgccaaccctgatgtg 333
             || || ||||  || || | |||||| ||||||||||||||
Sbjct: 17009 aaggatgggatgttcacaacctgcctcccaaccctgatgtg 17049

---

>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete
              sequence
          Length = 122557

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                          
Query: 233    ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
              ||||||||||||||||| ||||| |||||||||||||| |  || |||||||| ||||||
Sbjct: 104687 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 104746

                                                 
Query: 293    aatgaggggacattgacgatctgcctgccaaccct 327
              || || ||||  || || | |||||| ||||||||
Sbjct: 104747 aaggatgggatgttcacaacctgcctcccaaccct 104781



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                          
Query: 236    ccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaat 295
              ||||| |||||||| ||||| |||||||||||||| |  || ||||||||||||||||| 
Sbjct: 100055 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 99996

                                              
Query: 296    gaggggacattgacgatctgcctgccaaccct 327
              || ||||  || || | |||||| ||||||||
Sbjct: 99995  gatgggatgttcaccacctgcctcccaaccct 99964

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 233   ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
             ||||||||||||||||| ||||| |||||||||||||| |  || |||||||| ||||||
Sbjct: 54946 ccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatg 54887

               
Query: 293   aa 294
             ||
Sbjct: 54886 aa 54885



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                         
Query: 236   ccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaat 295
             ||||| |||||||| ||||| |||||||||||||| |  || ||||||||||||||||| 
Sbjct: 62174 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 62233

                                             
Query: 296   gaggggacattgacgatctgcctgccaaccct 327
             || ||||  || || | |||||| ||||||||
Sbjct: 62234 gatgggatgttcaccacctgcctcccaaccct 62265

---

>dbj|AB226106.1| Aspergillus oryzae cDNA, contig sequence: AoEST2963
          Length = 800

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 346
           |||||||| ||||| || ||||| |||||| |||| || | ||||||||| ||| |||||
Sbjct: 491 accatgaaggagggaacgttgacaatctgcttgccgacgcggatgtggcgctgcttgatc 432

                                     
Query: 347 aagacacggncatggtggatggactt 372
           | ||||||| | ||||||||||||||
Sbjct: 431 aggacacgggcgtggtggatggactt 406

---

>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                          
Query: 287    accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 346
              |||||||| ||||| || ||||| |||||| |||| || | ||||||||| ||| |||||
Sbjct: 742428 accatgaaggagggaacgttgacaatctgcttgccgacgcggatgtggcgctgcttgatc 742487

                                        
Query: 347    aagacacggncatggtggatggactt 372
              | ||||||| | ||||||||||||||
Sbjct: 742488 aggacacgggcgtggtggatggactt 742513

---

>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence
          Length = 129327

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                         
Query: 236   ccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaat 295
             ||||| |||||||| ||||| |||||||||||||| |  || ||||||||||||||||| 
Sbjct: 55630 ccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaag 55571

                                             
Query: 296   gaggggacattgacgatctgcctgccaaccct 327
             || ||||  || || | |||||| ||||||||
Sbjct: 55570 gatgggatgttcaccacctgcctcccaaccct 55539



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                         
Query: 233   ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
             ||||| || |||||||| || || |||||||||||||| |  || |||||||||||||||
Sbjct: 53183 ccaccaaagggacttgtgagggaaaagtcaatgtgcttctgtgaatcaaccctcaccatg 53124

                                                 
Query: 293   aatgaggggacattgacgatctgcctgccaaccctg 328
             || || ||||  || || | |||||| |||||||||
Sbjct: 53123 aaggatgggatgttaacaacctgcctcccaaccctg 53088

---

>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07,
              complete sequence
          Length = 175703

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 97/118 (82%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                          
Query: 246    ttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacat 305
              |||| |||||||||||||||||||| | ||| ||||||||||  |||||||| ||||   
Sbjct: 131631 ttgttagtgagaagtcaatgtgctttttagactcaaccctcaatatgaatgacgggatgc 131690

                                                                        
Query: 306    tgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtg 363
              |||  || || ||| |||| || |||||| ||||||| |||||||||||  |||||||
Sbjct: 131691 tga-aatttgtctgtcaacactaatgtggtgttgcctaatcaagacacgagcatggtg 131747

---

>gb|DQ200374.1| Solanum tuberosum clone 059F12 unknown mRNA
          Length = 875

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                       
Query: 233 ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
           ||||| || ||||| || || ||||||||||||||||| | ||| || || |||||||||
Sbjct: 575 ccaccaaaaggactggttagagagaagtcaatgtgcttctgagagtccactctcaccatg 516

                                                                
Query: 293 aatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgat 345
           ||||| |  ||||| || |  ||||| ||||||||||| || | |||||||||
Sbjct: 515 aatgaagcaacattcaccacttgccttccaaccctgatatgcctttgcctgat 463

---

>gb|AF154636.1| Nicotiana tabacum clone PR5 mRNA sequence
          Length = 673

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 357 catggtggatggactttgccatgccanncttgaagacaanagtntgaag 405
           |||||||||| ||||| |||||||||  ||||||||||| ||| |||||
Sbjct: 266 catggtggattgacttagccatgccagtcttgaagacaagagtttgaag 218

---

>ref|XM_657315.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S9 (AN4803.2),
           mRNA
          Length = 582

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 287 accatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatc 346
           |||||| | ||||| || ||||| |||||| |||| || | |||||| || ||| |||||
Sbjct: 443 accatgtaggagggaacgttgacaatctgcttgccgacacggatgtgacgctgcttgatc 384

                                     
Query: 347 aagacacggncatggtggatggactt 372
           | ||||||| | ||||||||||||||
Sbjct: 383 aggacacgggcgtggtggatggactt 358

---

>gb|AC151815.1| Solanum demissum chromosome 5 clone PGEC472P22 map MAP_LOC, complete
              sequence
          Length = 136150

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 233    ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
              ||||| || ||||| || || ||||||||||||||||| | ||| || || |||||||||
Sbjct: 121292 ccaccaaaaggactggttagagagaagtcaatgtgcttctgagagtccactctcaccatg 121233

                   
Query: 293    aatga 297
              |||||
Sbjct: 121232 aatga 121228

---

>ref|XM_366876.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02952.4) partial mRNA
          Length = 576

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 296 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 355
           |||||||| |||||||||||| |||| || | ||||||||| || |  || | |||||||
Sbjct: 428 gaggggacgttgacgatctgcttgccgacgcggatgtggcgctggcgaatgaggacacgg 369

                            
Query: 356 ncatggtggatggactt 372
            | ||||||||||||||
Sbjct: 368 gcgtggtggatggactt 352

---

>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full
           insert sequence
          Length = 989

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 284 ctcaccatgaatgaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctg 343
           |||||||||||| ||||||  ||||| | |||||| || || ||||||||| ||||||||
Sbjct: 546 ctcaccatgaataaggggatgttgacaagctgccttcccactctgatgtggtgttgcctg 487

             
Query: 344 at 345
           ||
Sbjct: 486 at 485

---

>gb|AY769323.1| Bombyx mori ribosomal protein S9 (RpS9) mRNA, complete cds
          Length = 686

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 230 cctccaccgaatggacttgtcagtgagaagtcaatgtgctt 270
           |||||||||||||||  | |||| |||||||||||||||||
Sbjct: 560 cctccaccgaatggagatttcagagagaagtcaatgtgctt 520

---

>gb|AY193430.1| Lactuca saligna genotype PI491204 40S ribosomal protein S9 gene,
           partial cds
          Length = 459

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>gb|AY193429.1| Lactuca saligna genotype CGN9311 40S ribosomal protein S9 gene,
           partial cds
          Length = 516

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>gb|AY193428.1| Lactuca saligna genotype US93UC10 40S ribosomal protein S9 gene,
           partial cds
          Length = 516

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>gb|AY193427.1| Lactuca serriola genotype W66336A 40S ribosomal protein S9 gene,
           partial cds
          Length = 520

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgagtccaccctcaccatgaa 139

---

>gb|AY193426.1| Lactuca sativa cultivar Mariska 40S ribosomal protein S9 gene,
           partial cds
          Length = 519

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>gb|AY193425.1| Lactuca sativa cultivar Calmar 40S ribosomal protein S9 gene,
           partial cds
          Length = 519

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>gb|AY193424.1| Lactuca sativa cultivar Diana 40S ribosomal protein S9 gene,
           partial cds
          Length = 516

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 239 aatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatgaa 294
           |||||||| || |||||||| ||||||||||| |  || || ||||||||||||||
Sbjct: 84  aatggactcgtgagtgagaaatcaatgtgcttctgtgaatccaccctcaccatgaa 139

---

>ref|XM_533590.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S9
           (LOC476387), mRNA
          Length = 696

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 323 accctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgcca 377
           |||||||| ||||| || | |||||  |||||| |||||||||||||||| ||||
Sbjct: 439 accctgatatggcgctggcggatcagcacacgggcatggtggatggacttggcca 385

---

>gb|BT014007.1| Lycopersicon esculentum clone 133059F, mRNA sequence
          Length = 891

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 233 ccaccgaatggacttgtcagtgagaagtcaatgtgcttntcagattcaaccctcaccatg 292
           |||||||| ||||| || || ||||||||||||||||| |  || || || |||||||||
Sbjct: 566 ccaccgaaaggactggtgagagagaagtcaatgtgcttctgggagtccactctcaccatg 507

             
Query: 293 aa 294
           ||
Sbjct: 506 aa 505

---

>gb|AY221154.1| Volvariella volvacea clone Cor4 cold-induced gene mRNA, partial
           sequence
          Length = 618

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 299 gggacattgacgatctgcctgccaaccctgatgtggcgttgcctgat 345
           ||||||||||| || ||| ||||||| | |||||| |||||||||||
Sbjct: 529 gggacattgacaatttgcttgccaacacggatgtgtcgttgcctgat 483

---

>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9,
           transcript variant 1 (LOC533892), mRNA
          Length = 946

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 58/71 (81%)
 Strand = Plus / Minus

                                                                       
Query: 323 accctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgcca 382
           |||||||||||||| || | ||| |  |||||| | |||||||||||||| |||| ||| 
Sbjct: 702 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggccaggccc 643

                      
Query: 383 nncttgaagac 393
             |||||||||
Sbjct: 642 agcttgaagac 632

---

>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9,
           transcript variant 9 (LOC533892), mRNA
          Length = 766

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 58/71 (81%)
 Strand = Plus / Minus

                                                                       
Query: 323 accctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgcca 382
           |||||||||||||| || | ||| |  |||||| | |||||||||||||| |||| ||| 
Sbjct: 522 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggccaggccc 463

                      
Query: 383 nncttgaagac 393
             |||||||||
Sbjct: 462 agcttgaagac 452

---

>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9,
           transcript variant 3 (LOC533892), mRNA
          Length = 738

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 58/71 (81%)
 Strand = Plus / Minus

                                                                       
Query: 323 accctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgcca 382
           |||||||||||||| || | ||| |  |||||| | |||||||||||||| |||| ||| 
Sbjct: 494 accctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggccaggccc 435

                      
Query: 383 nncttgaagac 393
             |||||||||
Sbjct: 434 agcttgaagac 424

---

>ref|XM_959140.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial
           mRNA
          Length = 573

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                       
Query: 296 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 355
           ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| 
Sbjct: 428 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 369

                            
Query: 356 ncatggtggatggactt 372
            | ||||||||||||||
Sbjct: 368 gcgtggtggatggactt 352

---

>ref|XM_329138.1| Neurospora crassa OR74A hypothetical protein (NCU01949.1) partial
           mRNA
          Length = 573

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                       
Query: 296 gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 355
           ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| 
Sbjct: 428 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 369

                            
Query: 356 ncatggtggatggactt 372
            | ||||||||||||||
Sbjct: 368 gcgtggtggatggactt 352

---

>ref|XM_455020.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23749g predicted mRNA
          Length = 741

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 256 gaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgat 312
           ||||||||||||||| |||||||| |  || |||||||| || ||||  ||||||||
Sbjct: 100 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 156

---

>ref|XM_455021.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23760g predicted mRNA
          Length = 567

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 256 gaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgat 312
           ||||||||||||||| |||||||| |  || |||||||| || ||||  ||||||||
Sbjct: 474 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 418

---

>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 256     gaagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgat 312
               ||||||||||||||| |||||||| |  || |||||||| || ||||  ||||||||
Sbjct: 2103822 gaagtcaatgtgcttctcagattccaatctgaccatgaaagatgggatgttgacgat 2103878

---

>gb|DQ387872.1| Neurospora crassa strain Adiopodoume-1 Srp interval sequence
          Length = 33499

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 296   gaggggacattgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacgg 355
             ||||| || |||||||||||| |||| || | ||||||||| || | ||| | |||||| 
Sbjct: 26106 gagggaacgttgacgatctgcttgccgacgcggatgtggcgctggcggatgaggacacga 26047

                              
Query: 356   ncatggtggatggactt 372
              | ||||||||||||||
Sbjct: 26046 gcgtggtggatggactt 26030

---

>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 257    aagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatctgc 316
              |||||||||||||| || || || |  ||||||||||| || ||||| ||||| ||||||
Sbjct: 162821 aagtcaatgtgcttctcggagtccaatctcaccatgaaggatgggacgttgacaatctgc 162762

                   
Query: 317    ctgcc 321
               ||||
Sbjct: 162761 ttgcc 162757

---

>ref|NM_209959.1| Eremothecium gossypii AEL255Wp (AEL255W), mRNA
          Length = 567

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 257 aagtcaatgtgcttntcagattcaaccctcaccatgaatgaggggacattgacgatctgc 316
           |||||||||||||| || || || |  ||||||||||| || ||||| ||||| ||||||
Sbjct: 473 aagtcaatgtgcttctcggagtccaatctcaccatgaaggatgggacgttgacaatctgc 414

                
Query: 317 ctgcc 321
            ||||
Sbjct: 413 ttgcc 409

---

>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete
             sequence
          Length = 180316

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ctagttcctcattcctcttcctcatc 166
             ||||||||||||||||||||| ||||
Sbjct: 16622 ctagttcctcattcctcttccccatc 16647

---

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 305    ttgacgatctgcctgccaaccctgatgtggcgttgcctgat 345
              |||||||||||| ||||||| | |||||| | |||||||||
Sbjct: 585150 ttgacgatctgcttgccaactcggatgtgcctttgcctgat 585190

---

>ref|XM_749816.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S9
           (Afu3g06970) partial mRNA
          Length = 714

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 305 ttgacgatctgcctgccaaccctgatgtggcgttgcctgatcaagacacggncatggtgg 364
           |||||||||||| |||| || | |||||| || ||| |||||| ||||||  | ||||| 
Sbjct: 557 ttgacgatctgcttgccgacacggatgtgacgctgcttgatcaggacacgagcgtggtga 498

                   
Query: 365 atggactt 372
           ||||||||
Sbjct: 497 atggactt 490

---

>ref|XM_570885.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNE02160) partial mRNA
          Length = 674

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 305 ttgacgatctgcctgccaaccctgatgtggcgttgcctgat 345
           |||||||||||| ||||||| | |||||| | |||||||||
Sbjct: 440 ttgacgatctgcttgccaactcggatgtgcctttgcctgat 400

---

>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the
             TLR4 gene for toll-like receptor 4, the 5' end of a novel
             gene and a CpG island, complete sequence
          Length = 146978

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 183   ccaccacttgccttcttctggttct 207
             ||||||||| |||||||||||||||
Sbjct: 96464 ccaccacttcccttcttctggttct 96488

---

>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
             sequence
          Length = 240827

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   caaccctcaccatgaatgagg 299
             |||||||||||||||||||||
Sbjct: 50849 caaccctcaccatgaatgagg 50869

---

>gb|AC093467.10| Mus musculus chromosome 12, clone RP23-9A4, complete sequence
          Length = 236969

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 145    ttcctcattcctcttcctcat 165
              |||||||||||||||||||||
Sbjct: 140138 ttcctcattcctcttcctcat 140158

---

>ref|NM_102817.1| Arabidopsis thaliana unknown protein AT1G30800 mRNA, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 tcctcttcctcatcaccacc 172
           ||||||||||||||||||||
Sbjct: 26  tcctcttcctcatcaccacc 45

---

>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9,
           transcript variant 7 (LOC533892), mRNA
          Length = 740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 56/69 (81%)
 Strand = Plus / Minus

                                                                       
Query: 325 cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
           |||||||||||| || | ||| |  |||||| | |||||||||||||| |||| |||   
Sbjct: 492 cctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggccaggcccag 433

                    
Query: 385 cttgaagac 393
           |||||||||
Sbjct: 432 cttgaagac 424

---

>ref|XM_872355.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9,
           transcript variant 6 (LOC533892), mRNA
          Length = 727

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 56/69 (81%)
 Strand = Plus / Minus

                                                                       
Query: 325 cctgatgtggcgttgcctgatcaagacacggncatggtggatggactttgccatgccann 384
           |||||||||||| || | ||| |  |||||| | |||||||||||||| |||| |||   
Sbjct: 492 cctgatgtggcgctggcggatgagcacacgggcgtggtggatggacttggccaggcccag 433

                    
Query: 385 cttgaagac 393
           |||||||||
Sbjct: 432 cttgaagac 424

---

>gb|AY692728.1| Saccharomyces cerevisiae clone FLH158303.01X YLR427W gene, complete
           cds
          Length = 2013

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 183 ccaccacttgccttcttctg 202
           ||||||||||||||||||||
Sbjct: 38  ccaccacttgccttcttctg 19

---

>gb|BT012401.1| Arabidopsis thaliana At1g30800 mRNA, complete cds
          Length = 720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 tcctcttcctcatcaccacc 172
           ||||||||||||||||||||
Sbjct: 26  tcctcttcctcatcaccacc 45

---

>gb|BT011773.1| Arabidopsis thaliana At1g30800 mRNA, complete cds
          Length = 1177

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 tcctcttcctcatcaccacc 172
           ||||||||||||||||||||
Sbjct: 98  tcctcttcctcatcaccacc 117

---

>ref|XM_809245.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511445.90) partial mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 ttgccttcttctggttcttc 209
           ||||||||||||||||||||
Sbjct: 182 ttgccttcttctggttcttc 163

---

>gb|AY326266.1| Gallus gallus ATP-binding cassette sub-family A member 4 (ABCA4)
           gene, exon 48, intron 48 and partial cds
          Length = 995

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cctcttcctcatcaccacca 173
           ||||||||||||||||||||
Sbjct: 695 cctcttcctcatcaccacca 714

---

>emb|AL031644.1|SPCC613 S.pombe chromosome III cosmid c613
          Length = 28999

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  attcctcttcctcatcacca 170
            ||||||||||||||||||||
Sbjct: 5935 attcctcttcctcatcacca 5916

---

>gb|AF447343.1| Nectarinia senegalensis cytochrome c oxidase subunit II gene,
           partial cds; tRNA-Lys gene, complete sequence; and ATP
           synthase 8 and ATP synthase 6 genes, complete cds;
           mitochondrial genes for mitochondrial products
          Length = 999

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  taaagcactcacaacaccaa 113
           ||||||||||||||||||||
Sbjct: 274 taaagcactcacaacaccaa 293

---

>ref|NM_001022686.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC613.03),
           partial mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 attcctcttcctcatcacca 170
           ||||||||||||||||||||
Sbjct: 373 attcctcttcctcatcacca 354

---

>gb|AC097652.2| Homo sapiens BAC clone RP11-138B4 from 4, complete sequence
          Length = 114950

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ctcttcctcatcaccaccag 174
             ||||||||||||||||||||
Sbjct: 28444 ctcttcctcatcaccaccag 28425

---

>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence
          Length = 203534

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   cctcttcctcatcaccacca 173
             ||||||||||||||||||||
Sbjct: 38204 cctcttcctcatcaccacca 38185

---

>gb|DQ108802.1| Arabidopsis thaliana clone 256155 mRNA sequence
          Length = 1292

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 tcctcttcctcatcaccacc 172
           ||||||||||||||||||||
Sbjct: 932 tcctcttcctcatcaccacc 913

---

>gb|AC128650.6| Homo sapiens 3 BAC RP11-373L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119990

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   cctcttcctcatcaccacca 173
             ||||||||||||||||||||
Sbjct: 44227 cctcttcctcatcaccacca 44246

---

>gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana BAC T17H7 from Chromosome 1,
             complete sequence
          Length = 73805

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tcctcttcctcatcaccacc 172
             ||||||||||||||||||||
Sbjct: 17088 tcctcttcctcatcaccacc 17107

---

>emb|AJ341691.1|HSA341691 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-BM16RS
          Length = 772

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gccttcttctggttcttcct 211
           ||||||||||||||||||||
Sbjct: 353 gccttcttctggttcttcct 334

---

>emb|AJ341475.1|HSA341475 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-DN12RS
          Length = 759

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gccttcttctggttcttcct 211
           ||||||||||||||||||||
Sbjct: 353 gccttcttctggttcttcct 334

---

>emb|AJ341863.1|HSA341863 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-BC12RS
          Length = 769

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gccttcttctggttcttcct 211
           ||||||||||||||||||||
Sbjct: 353 gccttcttctggttcttcct 334

---

>gb|BC082895.1| Xenopus laevis hypothetical LOC494780, mRNA (cDNA clone
           IMAGE:6951621), partial cds
          Length = 2055

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 cattcctcttcctcatcacc 169
           ||||||||||||||||||||
Sbjct: 153 cattcctcttcctcatcacc 134

---

>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete
             sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   cctcttcctcatcaccacca 173
             ||||||||||||||||||||
Sbjct: 41498 cctcttcctcatcaccacca 41517

---

>emb|AL627238.15| Mouse DNA sequence from clone RP23-46M23 on chromosome 4, complete
              sequence
          Length = 210380

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    gaatggacttgtcagtgaga 257
              ||||||||||||||||||||
Sbjct: 139658 gaatggacttgtcagtgaga 139677

---

>gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XII cosmid 9576
          Length = 35805

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ccaccacttgccttcttctg 202
             ||||||||||||||||||||
Sbjct: 23915 ccaccacttgccttcttctg 23896

---

>gb|BC108444.1| Xenopus laevis cDNA clone IMAGE:7980441, containing frame-shift
           errors
          Length = 2067

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 cattcctcttcctcatcacc 169
           ||||||||||||||||||||
Sbjct: 182 cattcctcttcctcatcacc 163

---

>emb|AJ342190.1|HSA342190 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-6AM7RS
          Length = 691

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gccttcttctggttcttcct 211
           ||||||||||||||||||||
Sbjct: 353 gccttcttctggttcttcct 334

---

>emb|AJ342181.1|HSA342181 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ6-AC2RS
          Length = 711

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 gccttcttctggttcttcct 211
           ||||||||||||||||||||
Sbjct: 353 gccttcttctggttcttcct 334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,708,930
Number of Sequences: 3902068
Number of extensions: 2708930
Number of successful extensions: 52086
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51844
Number of HSP's gapped (non-prelim): 238
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---