Clone Name | rbasd18a21 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK102592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098G02, full insert sequence Length = 2491 Score = 214 bits (108), Expect = 3e-52 Identities = 200/230 (86%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 467 tcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttctccat 526 |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1830 tcttcaaaggcgcctttgagctactagcttcctttttggaagatttctccttttctcctc 1771 Query: 527 cacttatgctggcatcagaaccctcttc---agaatcatcactaggggatccgctatcat 583 |||||| || || ||||||||||| || |||||||||| |||| ||||| || || | Sbjct: 1770 cacttaaactagcgtcagaaccctcctctccagaatcatcagtaggagatccactgtcgt 1711 Query: 584 ccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctgatttt 643 |||||||||||||||||||||| |||||||||||||| || ||||| |||| ||||||| Sbjct: 1710 ccttgtccgccacaaaatcttcatcctcttcatcactctcatcatcgccagtctgatttc 1651 Query: 644 taattcgctccaaatgtggatcaacagggtcatcatcagtgctctgaaga 693 | || ||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 1650 tgatccgctccagatgaggatcaacagcatcatcatcagtgctctgaaga 1601 Score = 180 bits (91), Expect = 4e-42 Identities = 184/215 (85%) Strand = Plus / Minus Query: 181 ccgcggtaagcagcagtctcctctgcatagcgtttcttatccacttgggactgctcaagg 240 |||||||| || || | |||||| || ||||| ||||| || ||||| |||||||| | | Sbjct: 2116 ccgcggtaggcggctgactcctccgcgtagcgcttcttgtcaacttgagactgctcgacg 2057 Query: 241 tatggctgcttctcctcagctgacatcttttgccatttctctccaagcttctttgcaata 300 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||| ||||| Sbjct: 2056 tatggctgcttctcctcggctgtcatcttttgccacctctccccaagcttcttcgcaatc 1997 Query: 301 tctgtggtgctgagttcggggttgatgttcttcaaattagctcgctcagcctttgagaag 360 |||||||| || || || ||| ||||||||| ||||||||||||||| ||||||||| Sbjct: 1996 tctgtggtagccagctccggattgctgttcttcagattagctcgctcagcttttgagaag 1937 Query: 361 tacatgaatggtgctattgctcttttgggggcatt 395 |||||||||||||| ||||||||||| |||||||| Sbjct: 1936 tacatgaatggtgcaattgctcttttaggggcatt 1902
>dbj|AK068959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002O22, full insert sequence Length = 2464 Score = 204 bits (103), Expect = 3e-49 Identities = 195/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttct 522 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 1753 ttcctcttcacaggtggctttgaactactagcttcctttttggataatttctctttttca 1694 Query: 523 ccatcacttatgctggcatcagaaccctcttca---gaatcatcactaggggatccgcta 579 || ||||| || ||||| |||||||| || ||||||||| |||| ||||| ||| Sbjct: 1693 cccccactttcactagcatctgaaccctccccaccagaatcatcagtaggtgatccacta 1634 Query: 580 tcatccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctga 639 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1633 tcatccttatccgcaacaaaatcttcatcctcttcatcactttcctcatccccagcctga 1574 Query: 640 tttttaattcgctccaaatgtggatcaacagggtcatcatcagtg 684 ||||||||||| || | |||||||||||||| |||||||||||| Sbjct: 1573 tttttaattcgttctagatgtggatcaacagcatcatcatcagtg 1529 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Minus Query: 247 tgcttctcctcagctgacatcttttgccatttctctccaagcttctttgcaatatctgtg 306 |||||||| || ||| |||||||||||| |||| || |||||||||||||| ||||| Sbjct: 1963 tgcttctcttcgcctgtcatcttttgccacatctccccgagcttctttgcaatctctgtt 1904 Query: 307 gtgctgagttcggggttgatgttcttcaaattagctcgctcagcctttgagaagtacatg 366 || | || || ||| | ||||||| ||| ||||||||||| |||||||||||||| Sbjct: 1903 gtaggcaaatcaggattgttattcttcatatttcctcgctcagccattgagaagtacatg 1844 Query: 367 aatggtgctattgctcttttgggggcatt 395 ||||||| |||||||||||||||||||| Sbjct: 1843 aatggtgtcattgctcttttgggggcatt 1815
>ref|NM_189606.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2465 Score = 196 bits (99), Expect = 7e-47 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttct 522 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 1753 ttcctcttcacaggtggctttgaactactagcttcctttttggataatttctctttttca 1694 Query: 523 ccatcacttatgctggcatcagaaccctcttca---gaatcatcactaggggatccgcta 579 || ||||| || ||||| ||| |||| || ||||||||| |||| ||||| ||| Sbjct: 1693 cccccactttcactagcatctgaatcctccccaccagaatcatcagtaggtgatccacta 1634 Query: 580 tcatccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctga 639 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1633 tcatccttatccgcaacaaaatcttcatcctcttcatcactttcctcatccccagcctga 1574 Query: 640 tttttaattcgctccaaatgtggatcaacagggtcatcatcagtg 684 ||||||||||| || | |||||||||||||| |||||||||||| Sbjct: 1573 tttttaattcgttctagatgtggatcaacagcatcatcatcagtg 1529 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 328 ttcttcaaattagctcgctcagcctttgagaagtacatgaatggtgctattgctcttttg 387 ||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 1882 ttcttcatatttcctcgctcagccattgagaagtacatgaatggtgtcattgctcttttg 1823 Query: 388 ggggcatt 395 |||||||| Sbjct: 1822 ggggcatt 1815
>gb|AF503585.1| Oryza sativa (indica cultivar-group) early drought induced protein (R1G1A) mRNA, complete cds Length = 2468 Score = 196 bits (99), Expect = 7e-47 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttct 522 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 1733 ttcctcttcacaggtggctttgaactactagcttcctttttggataatttctctttttca 1674 Query: 523 ccatcacttatgctggcatcagaaccctcttca---gaatcatcactaggggatccgcta 579 || ||||| || ||||| ||| |||| || ||||||||| |||| ||||| ||| Sbjct: 1673 cccccactttcactagcatctgaatcctccccaccagaatcatcagtaggtgatccacta 1614 Query: 580 tcatccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctga 639 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1613 tcatccttatccgcaacaaaatcttcatcctcttcatcactttcctcatccccagcctga 1554 Query: 640 tttttaattcgctccaaatgtggatcaacagggtcatcatcagtg 684 ||||||||||| || | |||||||||||||| |||||||||||| Sbjct: 1553 tttttaattcgttctagatgtggatcaacagcatcatcatcagtg 1509 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 328 ttcttcaaattagctcgctcagcctttgagaagtacatgaatggtgctattgctcttttg 387 ||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 1862 ttcttcatatttcctcgctcagccattgagaagtacatgaatggtgtcattgctcttttg 1803 Query: 388 ggggcatt 395 |||||||| Sbjct: 1802 ggggcatt 1795
>dbj|AB117991.1| Oryza sativa (japonica cultivar-group) bip104 mRNA for BRI1-KD interacting protein 104, partial cds Length = 1072 Score = 196 bits (99), Expect = 7e-47 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttct 522 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 345 ttcctcttcacaggtggctttgaactactagcttcctttttggataatttctctttttca 286 Query: 523 ccatcacttatgctggcatcagaaccctcttca---gaatcatcactaggggatccgcta 579 || ||||| || ||||| ||| |||| || ||||||||| |||| ||||| ||| Sbjct: 285 cccccactttcactagcatctgaatcctccccaccagaatcatcagtaggtgatccacta 226 Query: 580 tcatccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctga 639 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 225 tcatccttatccgcaacaaaatcttcatcctcttcatcactttcctcatccccagcctga 166 Query: 640 tttttaattcgctccaaatgtggatcaacagggtcatcatcagtg 684 ||||||||||| || | |||||||||||||| |||||||||||| Sbjct: 165 tttttaattcgttctagatgtggatcaacagcatcatcatcagtg 121 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 328 ttcttcaaattagctcgctcagcctttgagaagtacatgaatggtgctattgctcttttg 387 ||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 474 ttcttcatatttcctcgctcagccattgagaagtacatgaatggtgtcattgctcttttg 415 Query: 388 ggggcatt 395 |||||||| Sbjct: 414 ggggcatt 407
>dbj|AK066832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A09, full insert sequence Length = 2508 Score = 196 bits (99), Expect = 7e-47 Identities = 194/225 (86%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttggaagatttctccttttct 522 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 1803 ttcctcttcacaggtggctttgaactactagcttcctttttggataatttctctttttca 1744 Query: 523 ccatcacttatgctggcatcagaaccctcttca---gaatcatcactaggggatccgcta 579 || ||||| || ||||| ||| |||| || ||||||||| |||| ||||| ||| Sbjct: 1743 cccccactttcactagcatctgaatcctccccaccagaatcatcagtaggtgatccacta 1684 Query: 580 tcatccttgtccgccacaaaatcttcgtcctcttcatcactttcttcatcaccagcctga 639 |||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1683 tcatccttatccgcaacaaaatcttcatcctcttcatcactttcctcatccccagcctga 1624 Query: 640 tttttaattcgctccaaatgtggatcaacagggtcatcatcagtg 684 ||||||||||| || | |||||||||||||| |||||||||||| Sbjct: 1623 tttttaattcgttctagatgtggatcaacagcatcatcatcagtg 1579 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 328 ttcttcaaattagctcgctcagcctttgagaagtacatgaatggtgctattgctcttttg 387 ||||||| ||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 1932 ttcttcatatttcctcgctcagccattgagaagtacatgaatggtgtcattgctcttttg 1873 Query: 388 ggggcatt 395 |||||||| Sbjct: 1872 ggggcatt 1865
>emb|AJ244017.1|ZMA244017 Zea mays mRNA for SSRP1 protein Length = 2310 Score = 129 bits (65), Expect = 1e-26 Identities = 175/211 (82%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 477 tggctttgagctactagcttcctttttggaagatttctccttttctccatcacttatgct 536 ||||||||| || || |||||||| ||||| |||||||||||||| ||| |||| || Sbjct: 1708 tggctttgaactgcttgcttccttcttggatgatttctccttttcaccaccactatcact 1649 Query: 537 ggcatcagaaccctcttca---gaatcatcactaggggatccgctatcatccttgtccgc 593 ||||| || |||| ||| || |||||| |||| ||||| |||||||||||||| || Sbjct: 1648 agcatctgattcctcatcacctgagtcatcagtaggagatccactatcatccttgtctgc 1589 Query: 594 cacaaaatcttcgtcctcttcatcactttcttcatcaccagcctgatttttaattcgctc 653 ||||||||||| ||||||||||| ||||| ||||| || |||||||| ||||| ||||| Sbjct: 1588 aacaaaatcttcatcctcttcatcgctttcctcatccccggcctgattcttaatacgctc 1529 Query: 654 caaatgtggatcaacagggtcatcatcagtg 684 | |||||||||||||| |||||||||||| Sbjct: 1528 tagatgtggatcaacagcatcatcatcagtg 1498 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 206 catagcgtttcttatccacttgggactgctcaaggtatggctgcttctcctcagctgaca 265 |||| |||||||| || || |||| ||||| | ||| ||||| ||||| || |||||| Sbjct: 1973 cataacgtttcttgtcgacctgggcctgctggatgtaaggctgtttctcttcgcctgaca 1914 Query: 266 tcttttgccatttctctccaagcttctttgc 296 |||||||||| |||| |||||||||||||| Sbjct: 1913 tcttttgccacatctccccaagcttctttgc 1883
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 |||||||||||||||| ||||| |||||||||||||||||||| || | ||||||||||| Sbjct: 4501875 cctcttcatcactttcctcatccccagcctgatttttaattcgttctagatgtggatcaa 4501816 Query: 668 cagggtcatcatcagtg 684 ||| |||||||||||| Sbjct: 4501815 cagcatcatcatcagtg 4501799 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 341 ctcgctcagcctttgagaagtacatgaatggtgctattgctcttttgggggcatt 395 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4502324 ctcgctcagccattgagaagtacatgaatggtgtcattgctcttttgggggcatt 4502270 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttgga 506 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4502208 ttcctcttcacaggtggctttgaactactagcttcctttttgga 4502165 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 554 cagaatcatcactaggggatccgctatcatccttgtccgccacaaaatcttcgtcct 610 ||||||||||| |||| ||||| ||||||||||| ||||| ||||||||||| |||| Sbjct: 4502029 cagaatcatcagtaggtgatccactatcatccttatccgcaacaaaatcttcatcct 4501973 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 264 catcttttgccatttctctccaagcttctttgcaat 299 |||||||||||| |||| || |||||||||||||| Sbjct: 4502698 catcttttgccacatctccccgagcttctttgcaat 4502663
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 |||||||||||||||| ||||| |||||||||||||||||||| || | ||||||||||| Sbjct: 36562 cctcttcatcactttcctcatccccagcctgatttttaattcgttctagatgtggatcaa 36503 Query: 668 cagggtcatcatcagtg 684 ||| |||||||||||| Sbjct: 36502 cagcatcatcatcagtg 36486 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 341 ctcgctcagcctttgagaagtacatgaatggtgctattgctcttttgggggcatt 395 ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 37011 ctcgctcagccattgagaagtacatgaatggtgtcattgctcttttgggggcatt 36957 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 463 ttcctcttcacaggtggctttgagctactagcttcctttttgga 506 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 36895 ttcctcttcacaggtggctttgaactactagcttcctttttgga 36852 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 554 cagaatcatcactaggggatccgctatcatccttgtccgccacaaaatcttcgtcct 610 ||||||||||| |||| ||||| ||||||||||| ||||| ||||||||||| |||| Sbjct: 36716 cagaatcatcagtaggtgatccactatcatccttatccgcaacaaaatcttcatcct 36660 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 264 catcttttgccatttctctccaagcttctttgcaat 299 |||||||||||| |||| || |||||||||||||| Sbjct: 37385 catcttttgccacatctccccgagcttctttgcaat 37350
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 339 agctcgctcagcctttgagaagtacatgaatggtgctattgctcttttgggggcatt 395 |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 7120 agctcgctcagcttttgagaagtacatgaatggtgcaattgctcttttaggggcatt 7064 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 ||||||||||||| || ||||| |||| ||||||| | || ||||||| ||| ||||||| Sbjct: 6646 cctcttcatcactctcatcatcgccagtctgatttctgatccgctccagatgaggatcaa 6587 Query: 668 cagggtcatcatcagtgctctgaaga 693 ||| ||||||||||||||||||||| Sbjct: 6586 cagcatcatcatcagtgctctgaaga 6561 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 467 tcttcacaggtggctttgagctactagcttcctttttggaagatttct 514 |||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct: 6992 tcttcaaaggcgcctttgagctactagcttcctttttggaagatttct 6945 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/101 (84%), Gaps = 3/101 (2%) Strand = Plus / Minus Query: 513 ctccttttctccatcacttatgctggcatcagaac---cctcttcagaatcatcactagg 569 |||||||||||| |||||| || || ||||||| ||||| ||||||||||| |||| Sbjct: 6857 ctccttttctcctccacttaaactagcgtcagaaccctcctctccagaatcatcagtagg 6798 Query: 570 ggatccgctatcatccttgtccgccacaaaatcttcgtcct 610 ||||| || || ||||||||||||||||||||||| |||| Sbjct: 6797 agatccactgtcgtccttgtccgccacaaaatcttcatcct 6757 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 181 ccgcggtaagcagcagtctcctctgcatagcgtttcttatccacttgggactgctcaagg 240 |||||||| || || | |||||| || ||||| ||||| || ||||| |||||||| | | Sbjct: 7521 ccgcggtaggcggctgactcctccgcgtagcgcttcttgtcaacttgagactgctcgacg 7462 Query: 241 tatggctgcttctcctcagctg 262 ||||||||||||||||| |||| Sbjct: 7461 tatggctgcttctcctcggctg 7440 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 264 catcttttgccatttctctccaagcttctttgcaatatctgtggt 308 |||||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 7339 catcttttgccacctctccccaagcttcttcgcaatctctgtggt 7295
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 339 agctcgctcagcctttgagaagtacatgaatggtgctattgctcttttgggggcatt 395 |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 4912535 agctcgctcagcttttgagaagtacatgaatggtgcaattgctcttttaggggcatt 4912479 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 ||||||||||||| || ||||| |||| ||||||| | || ||||||| ||| ||||||| Sbjct: 4912061 cctcttcatcactctcatcatcgccagtctgatttctgatccgctccagatgaggatcaa 4912002 Query: 668 cagggtcatcatcagtgctctgaaga 693 ||| ||||||||||||||||||||| Sbjct: 4912001 cagcatcatcatcagtgctctgaaga 4911976 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 467 tcttcacaggtggctttgagctactagcttcctttttggaagatttct 514 |||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct: 4912407 tcttcaaaggcgcctttgagctactagcttcctttttggaagatttct 4912360 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/101 (84%), Gaps = 3/101 (2%) Strand = Plus / Minus Query: 513 ctccttttctccatcacttatgctggcatcagaac---cctcttcagaatcatcactagg 569 |||||||||||| |||||| || || ||||||| ||||| ||||||||||| |||| Sbjct: 4912272 ctccttttctcctccacttaaactagcgtcagaaccctcctctccagaatcatcagtagg 4912213 Query: 570 ggatccgctatcatccttgtccgccacaaaatcttcgtcct 610 ||||| || || ||||||||||||||||||||||| |||| Sbjct: 4912212 agatccactgtcgtccttgtccgccacaaaatcttcatcct 4912172 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 181 ccgcggtaagcagcagtctcctctgcatagcgtttcttatccacttgggactgctcaagg 240 |||||||| || || | |||||| || ||||| ||||| || ||||| |||||||| | | Sbjct: 4912936 ccgcggtaggcggctgactcctccgcgtagcgcttcttgtcaacttgagactgctcgacg 4912877 Query: 241 tatggctgcttctcctcagctg 262 ||||||||||||||||| |||| Sbjct: 4912876 tatggctgcttctcctcggctg 4912855 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 264 catcttttgccatttctctccaagcttctttgcaatatctgtggt 308 |||||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 4912754 catcttttgccacctctccccaagcttcttcgcaatctctgtggt 4912710
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 339 agctcgctcagcctttgagaagtacatgaatggtgctattgctcttttgggggcatt 395 |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 184943 agctcgctcagcttttgagaagtacatgaatggtgcaattgctcttttaggggcatt 184887 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 ||||||||||||| || ||||| |||| ||||||| | || ||||||| ||| ||||||| Sbjct: 184469 cctcttcatcactctcatcatcgccagtctgatttctgatccgctccagatgaggatcaa 184410 Query: 668 cagggtcatcatcagtgctctgaaga 693 ||| ||||||||||||||||||||| Sbjct: 184409 cagcatcatcatcagtgctctgaaga 184384 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 467 tcttcacaggtggctttgagctactagcttcctttttggaagatttct 514 |||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct: 184815 tcttcaaaggcgcctttgagctactagcttcctttttggaagatttct 184768 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/101 (84%), Gaps = 3/101 (2%) Strand = Plus / Minus Query: 513 ctccttttctccatcacttatgctggcatcagaac---cctcttcagaatcatcactagg 569 |||||||||||| |||||| || || ||||||| ||||| ||||||||||| |||| Sbjct: 184680 ctccttttctcctccacttaaactagcgtcagaaccctcctctccagaatcatcagtagg 184621 Query: 570 ggatccgctatcatccttgtccgccacaaaatcttcgtcct 610 ||||| || || ||||||||||||||||||||||| |||| Sbjct: 184620 agatccactgtcgtccttgtccgccacaaaatcttcatcct 184580 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 181 ccgcggtaagcagcagtctcctctgcatagcgtttcttatccacttgggactgctcaagg 240 |||||||| || || | |||||| || ||||| ||||| || ||||| |||||||| | | Sbjct: 185344 ccgcggtaggcggctgactcctccgcgtagcgcttcttgtcaacttgagactgctcgacg 185285 Query: 241 tatggctgcttctcctcagctg 262 ||||||||||||||||| |||| Sbjct: 185284 tatggctgcttctcctcggctg 185263 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 264 catcttttgccatttctctccaagcttctttgcaatatctgtggt 308 |||||||||||| |||| ||||||||||| ||||| |||||||| Sbjct: 185162 catcttttgccacctctccccaagcttcttcgcaatctctgtggt 185118
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 608 cctcttcatcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaa 667 |||| ||||||||||| || ||||||| | ||||||||| ||||| | ||||||||||| Sbjct: 16445 cctcctcatcactttcatctccaccagcttcatttttaatgcgctctagatgtggatcaa 16386 Query: 668 cagggtcatcatca 681 ||| ||||||||| Sbjct: 16385 cagcatcatcatca 16372 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 261 tgacatcttttgccatttctctccaag 287 ||||||||||| ||||||||||||||| Sbjct: 17423 tgacatctttttccatttctctccaag 17397
>gb|BT014517.1| Lycopersicon esculentum clone 133907F, mRNA sequence Length = 2322 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 554 cagaatcatcactaggggatccgctatcatccttgtccgccacaaaatcttcgtcctctt 613 ||||||||||| |||| || || | ||||||||| || ||||||||||||||||||| Sbjct: 1538 cagaatcatcagtaggagaccctccatcatccttatcgatgacaaaatcttcgtcctctt 1479 Query: 614 catcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaacag 670 ||||||| || || | || || | ||| ||||| ||||| | |||||||||||||| Sbjct: 1478 catcactgtcatccccgcccgcttcattcttaatacgctcaagatgtggatcaacag 1422
>gb|AY110129.1| Zea mays CL1186_1 mRNA sequence Length = 2305 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 206 catagcgtttcttatccacttgggactgctcaaggtatggctgcttctcctcagctgaca 265 |||| |||||||| || || |||| ||||| | ||| ||||| ||||| || |||||| Sbjct: 1973 cataacgtttcttgtcgacctgggcctgctggatgtaaggctgtttctcttcgcctgaca 1914 Query: 266 tcttttgccatttctctccaagcttctttgc 296 |||||||||| |||| |||||||||||||| Sbjct: 1913 tcttttgccacatctccccaagcttctttgc 1883 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 477 tggctttgagctactagcttcctttttggaagatttctccttttctccatcact 530 ||||||||| || || |||||||| ||||| |||||||||||||| ||| |||| Sbjct: 1708 tggctttgaactgcttgcttccttcttggatgatttctccttttcaccaccact 1655
>emb|X97906.1|VFHMG V.faba mRNA for transcription factor containing HMG-box Length = 2270 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 249 cttctcctcagctgacatcttttgccatttctctccaag 287 ||||||||| ||||||| |||| ||||||||||||||| Sbjct: 1867 cttctcctccgctgacaggtttttccatttctctccaag 1829 Score = 42.1 bits (21), Expect = 2.4 Identities = 93/117 (79%) Strand = Plus / Minus Query: 554 cagaatcatcactaggggatccgctatcatccttgtccgccacaaaatcttcgtcctctt 613 ||||||||||| |||| || || | |||||||||||| ||||||||| ||||| | Sbjct: 1556 cagaatcatcagtaggagaacctccatcatccttgtcgataacaaaatctgaatcctcct 1497 Query: 614 catcactttcttcatcaccagcctgatttttaattcgctccaaatgtggatcaacag 670 | |||||||| || ||||||| | |||| | || ||||| | |||||||||||||| Sbjct: 1496 cgtcactttcatctccaccagcttcatttctgatgcgctcaagatgtggatcaacag 1440
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence Length = 133305 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 260 ctgacatcttttgccatttctctccaa 286 |||||||||||| |||||||||||||| Sbjct: 32296 ctgacatctttttccatttctctccaa 32322
>ref|XM_529289.1| PREDICTED: Pan troglodytes LOC450271 (LOC450271), mRNA Length = 949 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 tttctctccaagcttctttgca 297 |||||||||||||||||||||| Sbjct: 99 tttctctccaagcttctttgca 78
>ref|XM_458280.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C14872g) partial mRNA Length = 3204 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatcac 631 |||||||||||||||||||||| Sbjct: 3170 tcttcatcactttcttcatcac 3149
>emb|AL513303.11| Human DNA sequence from clone RP11-464C19 on chromosome 10 Contains the 5' end of the COPEB gene for core promoter element binding protein (GBF ZF9 Zf9 BCD1 CPBP KLF6), two novel genes and a CpG island, complete sequence Length = 187833 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 tttctctccaagcttctttgca 297 |||||||||||||||||||||| Sbjct: 76145 tttctctccaagcttctttgca 76124
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatcac 631 |||||||||||||||||||||| Sbjct: 1217995 tcttcatcactttcttcatcac 1217974
>gb|AC073366.4| Homo sapiens chromosome 10 clone RP11-140C5, complete sequence Length = 176046 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 277 ttctctccaagcttctttgcaa 298 |||||||||||||||||||||| Sbjct: 151390 ttctctccaagcttctttgcaa 151411
>gb|AC010547.9| Homo sapiens chromosome 16 clone RP11-510M2, complete sequence Length = 183228 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 509 atttctccttttctccatcacttatg 534 |||||||||||||||| ||||||||| Sbjct: 115344 atttctccttttctccttcacttatg 115369
>ref|NM_101392.2| Arabidopsis thaliana unknown protein AT1G15240 mRNA, complete cds Length = 2646 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 agaaccctcttcagaatcatcacta 567 |||||| |||||||||||||||||| Sbjct: 2068 agaaccatcttcagaatcatcacta 2044
>ref|XM_632884.1| Dictyostelium discoideum hypothetical protein (DDB0186724), partial mRNA Length = 6714 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatca 630 ||||||||||||||||||||| Sbjct: 5828 tcttcatcactttcttcatca 5808
>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete sequence Length = 161457 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 15285 tcttcctcctcttcttcactttcttcatc 15257
>gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-464J4, complete sequence Length = 185081 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 510 tttctccttttctccatcacttatg 534 |||||||||||||| |||||||||| Sbjct: 159164 tttctccttttctctatcacttatg 159188
>ref|XM_977482.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 3 (5730406M06Rik), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_977515.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 4 (5730406M06Rik), mRNA Length = 4393 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1064 atcttcgtcctcttcatcact 1044
>ref|XM_977698.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 8 (5730406M06Rik), mRNA Length = 4785 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_977657.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 7 (5730406M06Rik), mRNA Length = 4545 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_920495.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 24 (5730406M06Rik), mRNA Length = 3652 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_920465.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 19 (5730406M06Rik), mRNA Length = 4393 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1064 atcttcgtcctcttcatcact 1044
>ref|XM_907606.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 18 (5730406M06Rik), mRNA Length = 4785 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_978345.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 33 (5730406M06Rik), mRNA Length = 4507 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1178 atcttcgtcctcttcatcact 1158
>ref|XM_920534.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 32 (5730406M06Rik), mRNA Length = 4545 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_895687.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 8 (5730406M06Rik), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_895633.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 3 (5730406M06Rik), mRNA Length = 4393 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1064 atcttcgtcctcttcatcact 1044
>ref|XM_884719.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 2 (5730406M06Rik), mRNA Length = 4785 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>ref|XM_283936.4| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 1 (5730406M06Rik), mRNA Length = 4545 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 1456 atcttcgtcctcttcatcact 1436
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 tcttcacaggtggctttgagc 487 ||||||||||||||||||||| Sbjct: 4495 tcttcacaggtggctttgagc 4475
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 ctctttggtttcctcttcaca 474 ||||||||||||||||||||| Sbjct: 120142 ctctttggtttcctcttcaca 120122
>gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete sequence Length = 133358 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tgctattgctcttttgggggc 392 ||||||||||||||||||||| Sbjct: 109590 tgctattgctcttttgggggc 109570
>gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's Hospital Oakland Research Institute) complete sequence Length = 224687 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 510 tttctccttttctccatcacttatg 534 |||||||||||||| |||||||||| Sbjct: 41101 tttctccttttctctatcacttatg 41077
>emb|AL133563.1|HSM801410 Homo sapiens mRNA; cDNA DKFZp434I036 (from clone DKFZp434I036); partial cds Length = 3792 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1394 tcttcctcctcttcttcactttcttcatc 1366
>emb|AJ006776.1|HSA6776 Homo sapiens mRNA for translation initiation factor 2 (IF2 gene) Length = 4169 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1798 tcttcctcctcttcttcactttcttcatc 1770
>emb|AL731677.9| Mouse DNA sequence from clone RP23-41J17 on chromosome 11, complete sequence Length = 97297 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 tctcctcagctgacatctttt 271 ||||||||||||||||||||| Sbjct: 54295 tctcctcagctgacatctttt 54315
>emb|CR857972.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1813 (from clone DKFZp469A1813) Length = 4213 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1823 tcttcctcctcttcttcactttcttcatc 1795
>dbj|AK001386.1| Homo sapiens cDNA FLJ10524 fis, clone NT2RP2000880, highly similar to Homo sapiens mRNA for translation initiation factor 2 Length = 2738 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 80 tcttcctcctcttcttcactttcttcatc 52
>gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179854 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 tttctccatcacttatgctgg 538 ||||||||||||||||||||| Sbjct: 92285 tttctccatcacttatgctgg 92265
>dbj|AK160288.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730525O18 product:SR rich protein (Fragment) homolog [Homo sapiens], full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 982 atcttcgtcctcttcatcact 962
>ref|XM_703700.1| PREDICTED: Danio rerio similar to MGC89425 protein, transcript variant 2 (LOC562643), mRNA Length = 2419 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatcacca 633 ||||| ||||||||||| ||||| ||||||||| Sbjct: 894 tcttcttcctcttcatctctttcatcatcacca 862
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 ctcttcatcactttcttcatc 629 ||||||||||||||||||||| Sbjct: 206616 ctcttcatcactttcttcatc 206636
>dbj|AK162695.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930030E14 product:SR rich protein (Fragment) homolog [Homo sapiens], full insert sequence Length = 1622 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 951 atcttcgtcctcttcatcact 931
>gb|BT006483.1| Arabidopsis thaliana At1g15240 gene, complete cds Length = 2121 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 agaaccctcttcagaatcatcacta 567 |||||| |||||||||||||||||| Sbjct: 1719 agaaccatcttcagaatcatcacta 1695
>gb|AC140344.3| Mus musculus BAC clone RP23-237M10 from chromosome 12, complete sequence Length = 205862 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 tcacaggtggctttgagctac 490 ||||||||||||||||||||| Sbjct: 200507 tcacaggtggctttgagctac 200487
>dbj|AK020035.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930420D19 product:hypothetical Glutamine-rich region containing protein, full insert sequence Length = 1381 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 989 atcttcgtcctcttcatcact 969
>dbj|AK077040.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932427P19 product:RIKEN cDNA 5730406M06 gene, full insert sequence Length = 3485 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 2692 atcttcgtcctcttcatcact 2672
>dbj|AK031964.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330513G17 product:hypothetical Serine-rich region containing protein, full insert sequence Length = 4082 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 992 atcttcgtcctcttcatcact 972
>dbj|AK012036.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610316I04 product:hypothetical protein, full insert sequence Length = 1463 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 998 atcttcgtcctcttcatcact 978
>dbj|AK083021.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530034C19 product:RIKEN cDNA 5730406M06 gene, full insert sequence Length = 2923 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 982 atcttcgtcctcttcatcact 962
>gb|BC060111.1| Mus musculus RIKEN cDNA 5730406M06 gene, mRNA (cDNA clone IMAGE:6836991) Length = 3946 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 969 atcttcgtcctcttcatcact 949
>dbj|AK017507.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730406M06 product:hypothetical Glutamine-rich region/Arginine-rich region/Serine-rich region containing protein, full insert sequence Length = 2179 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 983 atcttcgtcctcttcatcact 963
>emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, complete sequence Length = 232594 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 601 tcttcgtcctcttcatcactttcttcatcacca 633 ||||| ||||||||||| ||||| ||||||||| Sbjct: 215649 tcttcttcctcttcatctctttcatcatcacca 215681
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 510 tttctccttttctccatcacttatg 534 |||||||||||||| |||||||||| Sbjct: 1492336 tttctccttttctctatcacttatg 1492360
>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence Length = 233117 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 6259 tcttcctcctcttcttcactttcttcatc 6231
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 ctcttcatcactttcttcatc 629 ||||||||||||||||||||| Sbjct: 255666 ctcttcatcactttcttcatc 255686
>dbj|AK176485.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-29-B03 Length = 2656 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 agaaccctcttcagaatcatcacta 567 |||||| |||||||||||||||||| Sbjct: 2068 agaaccatcttcagaatcatcacta 2044
>dbj|AB018284.1| Homo sapiens mRNA for KIAA0741 protein, partial cds Length = 4177 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1808 tcttcctcctcttcttcactttcttcatc 1780
>dbj|AK117186.1| Arabidopsis thaliana At1g15240 mRNA for unknown protein, complete cds, clone: RAFL16-72-L19 Length = 2646 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 agaaccctcttcagaatcatcacta 567 |||||| |||||||||||||||||| Sbjct: 2068 agaaccatcttcagaatcatcacta 2044
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 ctcttcatcactttcttcatc 629 ||||||||||||||||||||| Sbjct: 241562 ctcttcatcactttcttcatc 241582
>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence Length = 214016 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 tcttcacaggtggctttgagc 487 ||||||||||||||||||||| Sbjct: 94087 tcttcacaggtggctttgagc 94107
>gb|BC032639.1| Homo sapiens eukaryotic translation initiation factor 5B, mRNA (cDNA clone MGC:44860 IMAGE:5496504), complete cds Length = 4149 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1764 tcttcctcctcttcttcactttcttcatc 1736
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 543 agaaccctcttcagaatcatcacta 567 |||||| |||||||||||||||||| Sbjct: 61451 agaaccatcttcagaatcatcacta 61427
>ref|NM_015904.3| Homo sapiens eukaryotic translation initiation factor 5B (EIF5B), mRNA Length = 4698 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 tcttcgtcctcttcatcactttcttcatc 629 ||||| |||||||| |||||||||||||| Sbjct: 1842 tcttcctcctcttcttcactttcttcatc 1814
>emb|CT025738.5| Mouse DNA sequence from clone RP24-378G24 on chromosome 12, complete sequence Length = 182200 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 tcacaggtggctttgagctac 490 ||||||||||||||||||||| Sbjct: 144257 tcacaggtggctttgagctac 144277
>emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chromosome 4, complete sequence Length = 230409 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 atcttcgtcctcttcatcact 620 ||||||||||||||||||||| Sbjct: 148969 atcttcgtcctcttcatcact 148949
>ref|NM_111998.2| Arabidopsis thaliana NHL1 AT3G11660 (NHL1) mRNA, complete cds Length = 1109 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 349 aatcttcgtcctcttcatca 368
>gb|BT020319.1| Arabidopsis thaliana At3g11660 gene, complete cds Length = 668 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 98 aatcttcgtcctcttcatca 117
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 599 aatcttcgtcctcttcatcactttcttc 626 |||| |||||||| |||||||||||||| Sbjct: 507848 aatcctcgtcctcctcatcactttcttc 507821
>ref|XM_456413.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A02145g) partial mRNA Length = 5325 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatc 629 |||||||||||||||||||| Sbjct: 2186 tcttcatcactttcttcatc 2167
>ref|XM_453107.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D00792g predicted mRNA Length = 3063 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 604 tcgtcctcttcatcactttcttcatcac 631 ||||| ||||||||||| |||||||||| Sbjct: 2396 tcgtcatcttcatcactatcttcatcac 2369
>gb|AY961926.1| Picea abies dehydrin 2 (Dhn) mRNA, complete cds Length = 924 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 cttcgtcctcttcatcactt 621 |||||||||||||||||||| Sbjct: 440 cttcgtcctcttcatcactt 421
>gb|AY961925.1| Picea abies dehydrin 2 (Dhn) mRNA, complete cds Length = 753 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 cttcgtcctcttcatcactt 621 |||||||||||||||||||| Sbjct: 272 cttcgtcctcttcatcactt 253
>ref|XM_744579.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05420) partial mRNA Length = 2154 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 604 tcgtcctcttcatcactttcttcatcac 631 ||||||||||| |||||||| ||||||| Sbjct: 425 tcgtcctcttcttcactttcctcatcac 398
>ref|XM_572826.1| Cryptococcus neoformans var. neoformans JEC21 ribosome biogenesis protein (CNI01830) partial mRNA Length = 3436 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 599 aatcttcgtcctcttcatcactttcttc 626 |||| |||||||| |||||||||||||| Sbjct: 364 aatcctcgtcctcctcatcactttcttc 337
>gb|AF264697.1| Arabidopsis thaliana NDR1/HIN1-Like protein 1 (NHL1) mRNA, complete cds Length = 915 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 151 aatcttcgtcctcttcatca 170
>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence Length = 45173 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 16293 aatcttcgtcctcttcatca 16274
>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217304 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aagcagcagtctcctctgca 207 |||||||||||||||||||| Sbjct: 130627 aagcagcagtctcctctgca 130608
>emb|Z81552.1|CEF56G4 Caenorhabditis elegans Cosmid F56G4, complete sequence Length = 38062 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatc 629 |||||||||||||||||||| Sbjct: 32450 tcttcatcactttcttcatc 32431
>ref|XM_723203.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01028) partial mRNA Length = 2577 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 cctcttcagaatcatcacta 567 |||||||||||||||||||| Sbjct: 406 cctcttcagaatcatcacta 387
>ref|XM_739013.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000932.02.0) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 607 tcctcttcatcactttcttcatca 630 |||||||||||| ||||||||||| Sbjct: 1775 tcctcttcatcattttcttcatca 1752
>emb|AJ783769.1| Sulfolobus tengchongensis spindle-shaped virus STSV1 complete genome Length = 75294 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tctcctcagctgacatcttt 270 |||||||||||||||||||| Sbjct: 54002 tctcctcagctgacatcttt 54021
>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a novel gene, complete sequence Length = 169430 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 ttctccatcacttatgctgg 538 |||||||||||||||||||| Sbjct: 58828 ttctccatcacttatgctgg 58809
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gtaagcagcagtctcctctg 205 |||||||||||||||||||| Sbjct: 75890 gtaagcagcagtctcctctg 75909
>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the FAM27C gene for family with sequence similarity 27, member C, three novel genes, five novel pseudogenes and six CpG islands, complete sequence Length = 202081 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ttctccatcacttatgctgg 538 |||||||||||||||||||| Sbjct: 20819 ttctccatcacttatgctgg 20838
>emb|AL355151.11| Human DNA sequence from clone RP11-288C24 on chromosome 9, complete sequence Length = 95128 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ttctccatcacttatgctgg 538 |||||||||||||||||||| Sbjct: 49588 ttctccatcacttatgctgg 49607
>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete sequence Length = 139086 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gcttcctttttggaagattt 512 |||||||||||||||||||| Sbjct: 28468 gcttcctttttggaagattt 28449
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatc 629 |||||||||||||||||||| Sbjct: 141525 tcttcatcactttcttcatc 141506
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 604 tcgtcctcttcatcactttcttcatcac 631 ||||| ||||||||||| |||||||||| Sbjct: 75817 tcgtcatcttcatcactatcttcatcac 75790
>emb|AL772146.4| Zebrafish DNA sequence from clone CH211-12P8 in linkage group 7 Contains part of a novel gene similar to SCRIB (scrribble), a novel gene similar to SIAHBP1 (fuse-binding protein-interacting repressor), a novel gene similar to HTR5A (5-hydroxytryptamine (serotonin) receptor 5A) and three CpG islands, complete sequence Length = 187241 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 caccagcctgatttttaatt 648 |||||||||||||||||||| Sbjct: 158682 caccagcctgatttttaatt 158701
>emb|AL591492.11| Zebrafish DNA sequence from clone BUSM1-261O22 in linkage group 20 Contains a novel gene similar to FKBP3 (FK506 binding protein 3), a novel gene for a protein similar to pre-mRNA processing proteins, a novel retrotransposon and two CpG islands, complete sequence Length = 92083 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 55422 ggattaacagggtcatcatcagtg 55445
>emb|AL109850.1|SPCC830 S.pombe chromosome III cosmid c830 Length = 31214 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 tcgtcctcttcatcactttc 623 |||||||||||||||||||| Sbjct: 30579 tcgtcctcttcatcactttc 30560
>gb|AY128421.1| Drosophila melanogaster GH14660 full insert cDNA Length = 4106 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cacactctttggtttcctct 469 |||||||||||||||||||| Sbjct: 1659 cacactctttggtttcctct 1678
>emb|BX950205.10| Zebrafish DNA sequence from clone CH211-226H8 in linkage group 22, complete sequence Length = 198379 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 37886 ggattaacagggtcatcatcagtg 37909
>ref|XM_945461.1| PREDICTED: Homo sapiens hypothetical protein LOC649471 (LOC649471), mRNA Length = 965 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aagcagcagtctcctctgca 207 |||||||||||||||||||| Sbjct: 473 aagcagcagtctcctctgca 454
>ref|XM_934015.1| PREDICTED: Homo sapiens hypothetical protein LOC644093 (LOC644093), mRNA Length = 965 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aagcagcagtctcctctgca 207 |||||||||||||||||||| Sbjct: 473 aagcagcagtctcctctgca 454
>emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 in linkage group 5, complete sequence Length = 157382 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 94320 ggattaacagggtcatcatcagtg 94297
>emb|BX322544.6| Zebrafish DNA sequence from clone DKEY-27N14 in linkage group 16, complete sequence Length = 102811 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 11197 ggattaacagggtcatcatcagtg 11174
>emb|BX322605.4| Zebrafish DNA sequence from clone RP71-80A19 in linkage group 10, complete sequence Length = 131830 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 92694 ggattaacagggtcatcatcagtg 92717
>ref|NM_001023473.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC830.12), partial mRNA Length = 451 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 tcgtcctcttcatcactttc 623 |||||||||||||||||||| Sbjct: 98 tcgtcctcttcatcactttc 79
>ref|NM_060511.2| Caenorhabditis elegans F56G4.4 (F56G4.4) mRNA, complete cds Length = 1465 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 tcttcatcactttcttcatc 629 |||||||||||||||||||| Sbjct: 992 tcttcatcactttcttcatc 973
>gb|AC008288.8|AC008288 Drosophila melanogaster, chromosome 2R, region 42E-42E, BAC clone BACR36G11, complete sequence Length = 174751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cacactctttggtttcctct 469 |||||||||||||||||||| Sbjct: 136894 cacactctttggtttcctct 136913
>gb|AC009342.5|AC009342 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone BACR29G01, complete sequence Length = 165855 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cacactctttggtttcctct 469 |||||||||||||||||||| Sbjct: 14003 cacactctttggtttcctct 13984
>emb|BX825335.1|CNS0A6GS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL2ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 842 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 95 aatcttcgtcctcttcatca 114
>gb|BT003850.1| Arabidopsis thaliana clone RAFL15-48-D07 (R20842) putative VAMP protein SEC22 (At3g11660) mRNA, complete cds Length = 916 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 152 aatcttcgtcctcttcatca 171
>gb|AY088586.1| Arabidopsis thaliana clone 8166 mRNA, complete sequence Length = 849 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 149 aatcttcgtcctcttcatca 168
>gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, complete sequence Length = 139150 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 aagcagcagtctcctctgca 207 |||||||||||||||||||| Sbjct: 52474 aagcagcagtctcctctgca 52455
>gb|AF243514.1|AF243514 Schistosoma mansoni MAK16-like protein gene, complete cds Length = 1892 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 607 tcctcttcatcactttcttcatca 630 |||||||| ||||||||||||||| Sbjct: 1607 tcctcttcttcactttcttcatca 1584
>gb|L06180.2|SCMGST Schistosoma mansoni MAK16-like protein mRNA, partial cds Length = 987 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 607 tcctcttcatcactttcttcatca 630 |||||||| ||||||||||||||| Sbjct: 635 tcctcttcttcactttcttcatca 612
>emb|BX005335.9| Zebrafish DNA sequence from clone DKEY-240N8, complete sequence Length = 211094 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 661 ggatcaacagggtcatcatcagtg 684 |||| ||||||||||||||||||| Sbjct: 56743 ggattaacagggtcatcatcagtg 56720
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cacactctttggtttcctct 469 |||||||||||||||||||| Sbjct: 259935 cacactctttggtttcctct 259916
>dbj|AP002514.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-3055E19, complete sequence Length = 201641 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 gcttctcctcagctgacatctttt 271 |||||||||||||| ||||||||| Sbjct: 71132 gcttctcctcagctcacatctttt 71109
>gb|BT020551.1| Arabidopsis thaliana At3g11660 gene, complete cds Length = 630 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 aatcttcgtcctcttcatca 618 |||||||||||||||||||| Sbjct: 66 aatcttcgtcctcttcatca 85
>dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT37A17, TM0240, complete sequence Length = 121317 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 tcctcttcatcactttcttc 626 |||||||||||||||||||| Sbjct: 13336 tcctcttcatcactttcttc 13317
>emb|AL935278.7| Mouse DNA sequence from clone RP23-84E1 on chromosome 2, complete sequence Length = 183353 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 tttttggaagatttctccttttct 522 |||||||||||||| ||||||||| Sbjct: 23827 tttttggaagatttttccttttct 23804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,116,230 Number of Sequences: 3902068 Number of extensions: 6116230 Number of successful extensions: 124378 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123936 Number of HSP's gapped (non-prelim): 437 length of query: 693 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 670 effective length of database: 17,143,297,704 effective search space: 11486009461680 effective search space used: 11486009461680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)