Clone Name | rbasd18a18 |
---|---|
Clone Library Name | barley_pub |
>GP157_HUMAN (Q5UAW9) Probable G-protein coupled receptor 157| Length = 335 Score = 31.2 bits (69), Expect = 0.66 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = +2 Query: 188 GGRCLRLPSIAIDPGCGHSLLHAISLINIASCTRCGVRRFFIRLICCCSS 337 G ++ P + + G G++ + I CTR R F CCCSS Sbjct: 251 GSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCCCCSS 300
>VIPR2_RAT (P35000) Vasoactive intestinal polypeptide receptor 2 precursor| (VIP-R-2) (Pituitary adenylate cyclase-activating polypeptide type III receptor) (PACAP type III receptor) (PACAP-R-3) Length = 437 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 195 LPPSLVFYYYLLLSANQ*AVCLWSWVWTGMSTQ 97 LPPS F YLL+ +VC+ +W+ T +S + Sbjct: 234 LPPSRCFLAYLLIGWGIPSVCIGAWIATRLSLE 266
>HUNB_DROVI (P13361) Protein hunchback| Length = 816 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/65 (29%), Positives = 25/65 (38%) Frame = +1 Query: 88 QHLLGGHSSPNPTPQAHCLLIC*QQQIIVKDKGGREVPPFAIDSNRSRLWSQPSSCHQLN 267 QH GG+ P+P P I DK PP + +S SQ SS Sbjct: 163 QHYYGGNMRPSPQPTPTAAPTAVAAAIQTGDKLQALTPPMDVTPPKSPAKSQQSSAEPEK 222 Query: 268 QHRLL 282 +H L+ Sbjct: 223 EHDLM 227
>VIPR2_MOUSE (P41588) Vasoactive intestinal polypeptide receptor 2 precursor| (VIP-R-2) (Pituitary adenylate cyclase-activating polypeptide type III receptor) (PACAP type III receptor) (PACAP-R-3) Length = 437 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 195 LPPSLVFYYYLLLSANQ*AVCLWSWVWTGMSTQ 97 LPPS F YLL+ +VC+ +W T +S + Sbjct: 234 LPPSRCFLAYLLIGWGIPSVCIGAWTATRLSLE 266
>EDG4_MACFA (Q95KH4) Lysophosphatidic acid receptor Edg-4 (LPA receptor 2)| (LPA-2) Length = 351 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +2 Query: 245 LLHAISLINIA--SCTRCGVRRFFIRLICC 328 L A SL+N A SC +RR F RL+CC Sbjct: 283 LAEANSLVNAAVYSCRDAEMRRTFRRLLCC 312
>EDG4_HUMAN (Q9HBW0) Lysophosphatidic acid receptor Edg-4 (LPA receptor 2)| (LPA-2) Length = 351 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +2 Query: 245 LLHAISLINIA--SCTRCGVRRFFIRLICC 328 L A SL+N A SC +RR F RL+CC Sbjct: 283 LAEANSLVNAAVYSCRDAEMRRTFRRLLCC 312
>HEXC_BOMMO (P49010) Chitooligosaccharidolytic beta-N-acetylglucosaminidase| precursor (EC 3.2.1.52) (Beta-GlcNAcase) (Beta-hexosaminidase) (Beta-N-acetylhexosaminidase) Length = 596 Score = 27.3 bits (59), Expect = 9.5 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +1 Query: 229 RLWSQPSSCHQLNQHRLLH 285 R+W++PS+ Q +HR+LH Sbjct: 549 RMWAEPSTAWQDAEHRMLH 567 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,791,949 Number of Sequences: 219361 Number of extensions: 770308 Number of successful extensions: 1509 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1492 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1509 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)