ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18a13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 575 bits (290), Expect = e-161 Identities = 422/462 (91%), Gaps = 3/462 (0%) Strand = Plus / Minus Query: 168 atactaactacatgacgggataagcaccgtacatggccatgccacacagcccgcggggcc 227 ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 1153 atactaactacatgacggggtaggcaccgtacatggcgatgccacacagcccgcggggcc 1094 Query: 228 cgtcggctcccctacgcatgaagaagaagccattctggccccacgtctggccccacgagt 287 ||||||||||||| |||| |||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1093 cgtcggctcccctgcgcacgaagaagaagcccttctgaccccaggtctgtccccacgagt 1034 Query: 288 tcttggcgatccagtactcttctcctgcgccggtgaccccgtagccgaccaccgtcacca 347 ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1033 tcttggcgatccagtactcttctccggcaccggtgactccgtagccgaccaccgtcacca 974 Query: 348 cgtggttctggctggtggtgcacggccccttgtacacgccggacttgtagttctgcagca 407 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | Sbjct: 973 cgtggttctggctggtggtgcacggccccctgtacacgccggacttgtagtcctgcagga 914 Query: 408 cggagccgctcccgtcgatctggacggtcaccggcgtcctgagcacggccagcgccagcg 467 ||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| | Sbjct: 913 cggggccgctcccgtcgatctggacggtcaccggcctcccgagcac-gccagcgccag-g 856 Query: 468 cgtcctcgttgctccccggctgcacgtcctggacgccggtgatcttgccgatgcgtcggg 527 | |||| |||| |||||| | || ||||||||||||||||| ||||||| || |||| Sbjct: 855 ggctctcgctgctgcccggccgtacatcctggacgccggtgattttgccgacacg-cggg 797 Query: 528 cggcgtcgtgcacctcgcatctgcctcgcttggccacgtaggggtactcggcctccgtga 587 | | |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 796 ctgtgtcgtgcaccgcgcatctgcctcgcttggccatgtaggggtactcggcctccgtga 737 Query: 588 ggaggccaccttttgatttgatccactggagtgcgctcttgg 629 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 736 ggaggcccccttttgatttgatccatgcgagtgcgctcttgg 695
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 983 ccccacgtcttgccccacgagttcttggctatccagtact 944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 12728727 ccccacgtcttgccccacgagttcttggctatccagtact 12728766 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagtact 305 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 6395235 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 6395280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||||||||||||||||||| Sbjct: 6400964 gccccacgagttcttggcgatccagtact 6400936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 13826295 ccccacgtctttccccacgagttcttggcgacccagtact 13826256 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 39495697 gccccacgagttcttgacgatccagtactc 39495668 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 13843214 ccacgagttcttggcgatccagtact 13843189 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 13821085 ccacgagttcttggcgatccagtact 13821110 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 12735936 ccacgagttcttggcgatccagtact 12735911 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 13830962 ccccacgtcttaccccacgagttcttggccagccagtact 13831001 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cattaatgcatcttatttta 133 |||||||||||||||||||| Sbjct: 6143689 cattaatgcatcttatttta 6143670
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 9126 ccccacgtcttgccccacgagttcttggctatccagtact 9165 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 16335 ccacgagttcttggcgatccagtact 16310
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 95756 ccccacgtcttgccccacgagttcttggctatccagtact 95795 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 102965 ccacgagttcttggcgatccagtact 102940
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1052 ccccacttctcgccccacgagttcttggcgatccagtact 1013
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagtact 305 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 965 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 920
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagtact 305 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 17630 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 17675 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||||||||||||||||||| Sbjct: 23359 gccccacgagttcttggcgatccagtact 23331
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagtact 305 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 166301 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 166346 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||||||||||||||||||| Sbjct: 172030 gccccacgagttcttggcgatccagtact 172002
>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA Length = 1101 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||||||||||||||||||| Sbjct: 999 gccccacgagttcttggcgatccagtact 971
>gb|AY253445.1| Triticum aestivum P9346A1-2-5-1 putative thiol protease mRNA, partial cds Length = 560 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtactc 306 |||||| ||| ||||||||||||| |||||||||||||||| Sbjct: 429 ccccacttctcgccccacgagttcctggcgatccagtactc 389
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 938 ccccacgtctttccccacgagttcttggcgacccagtact 899
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 63698 ccccacgtctttccccacgagttcttggcgacccagtact 63659 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 80617 ccacgagttcttggcgatccagtact 80592 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 58488 ccacgagttcttggcgatccagtact 58513 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 68365 ccccacgtcttaccccacgagttcttggccagccagtact 68404
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagta 303 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 637 ttctcgccccacttctcgccccacgagttcttgacgatccagta 594
>gb|M95060.1|MZEORFA Zea mays putative thiol protease homolog mRNA, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 260 ttctggccccacgtctggccccacgagttcttggcgatccagta 303 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 112 ttctcgccccacttctcgccccacgagttcttgacgatccagta 69
>ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 999 ccacgagttcttggcgatccagtact 974
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 960 gccccacgagttcttgacgatccagtactc 931
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 50139 gccccacgagttcttgacgatccagtactc 50110
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 70711 gccccacgagttcttgacgatccagtactc 70682
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 280 ccacgagttcttggcgatccagtact 305 |||||||||||||||||||||||||| Sbjct: 3516 ccacgagttcttggcgatccagtact 3491
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 1924 gccccacgagttcttgacgatccagtactc 1895
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 970 gccccacgagttcttgacgatccagtactc 941
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtactc 306 |||||||||||||||| ||||||||||||| Sbjct: 1886 gccccacgagttcttgacgatccagtactc 1857
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 34062 gccccacgagttcttgacgatccagtact 34034
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 1074 gccccacgagttcttgacgatccagtact 1046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 8298338 gccccacgagttcttgacgatccagtact 8298366 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 agccgctcccgtcgatctggacgg 434 ||||||||| |||||||||||||| Sbjct: 7706990 agccgctccggtcgatctggacgg 7707013
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 1080 gccccacgagttcttgacgatccagtact 1052
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 2596 gccccacgagttcttgacgatccagtact 2568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 gccccacgagttcttggcgatccagtact 305 |||||||||||||||| |||||||||||| Sbjct: 8369101 gccccacgagttcttgacgatccagtact 8369129 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 agccgctcccgtcgatctggacgg 434 ||||||||| |||||||||||||| Sbjct: 7777077 agccgctccggtcgatctggacgg 7777100
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 266 ccccacgtctggccccacgagttcttggcgatccagtact 305 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 935 ccccacgtcttaccccacgagttcttggccagccagtact 896
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 278 ccccacgagttcttggcgatccagtact 305 ||||||||||||||| |||||||||||| Sbjct: 152882 ccccacgagttcttgacgatccagtact 152855
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 276 ggccccacgagttcttggcgatccagta 303 ||||||||||||||||| |||||||||| Sbjct: 1052 ggccccacgagttcttgacgatccagta 1025
>emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chromosome 9, complete sequence Length = 233365 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 cacacatatatatagtaacaata 23 ||||||||||||||||||||||| Sbjct: 186280 cacacatatatatagtaacaata 186258
>ref|XM_346301.2| PREDICTED: Rattus norvegicus similar to ankyrin repeat and SOCS box-containing protein 9 (LOC367785), mRNA Length = 1137 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 398 ttctgcagcacggagccgctccc 420 ||||||||||||||||||||||| Sbjct: 524 ttctgcagcacggagccgctccc 546
>dbj|AB091669.1| Pandalus borealis PbCys mRNA for crustapain, complete cds Length = 1242 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 278 ccccacgagttcttggcgatccagtactcttctcc 312 ||||||||||||||| |||||||||| ||| |||| Sbjct: 890 ccccacgagttcttgacgatccagtaatctcctcc 856
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 ccgtacatggccatgccacacagccc 219 ||||||||||| |||||||||||||| Sbjct: 22154171 ccgtacatggcaatgccacacagccc 22154196 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ccccacgagttcttggcgatccagtact 305 |||||||||||||| |||||||||||| Sbjct: 22126325 ccccacgagttcttaacgatccagtact 22126352 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ccccacgagttcttggcgatccagtact 305 ||||||||||||||| ||||||||||| Sbjct: 22050555 ccccacgagttcttgatgatccagtact 22050582 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ccccacgagttcttggcgatccagtact 305 |||||||||||||| |||||||||||| Sbjct: 18948275 ccccacgagttcttcacgatccagtact 18948302
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 ccgtacatggccatgccacacagccc 219 ||||||||||| |||||||||||||| Sbjct: 75664 ccgtacatggcaatgccacacagccc 75689 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ccccacgagttcttggcgatccagtact 305 |||||||||||||| |||||||||||| Sbjct: 47818 ccccacgagttcttaacgatccagtact 47845
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 gagcacggccagcgccagcgc 468 ||||||||||||||||||||| Sbjct: 2787899 gagcacggccagcgccagcgc 2787919
>gb|DQ079995.1| Drosophila simulans male accessory gland protein (CG4847) mRNA, partial cds Length = 1086 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 279 cccacgagttcttggcgatccagta 303 |||||||||||||| |||||||||| Sbjct: 997 cccacgagttcttgacgatccagta 973
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 gccagcgcgtcctcgttgctc 481 ||||||||||||||||||||| Sbjct: 1399381 gccagcgcgtcctcgttgctc 1399401
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 cgatgcgtcgggcggcgtcgt 536 ||||||||||||||||||||| Sbjct: 4031783 cgatgcgtcgggcggcgtcgt 4031763
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 408098 gccggtgatcttgccgatgcg 408078
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 3398019 gccggtgatcttgccgatgcg 3397999
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 190291 gccggtgatcttgccgatgcg 190311
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 agcacggccagcgccagcgcg 469 ||||||||||||||||||||| Sbjct: 167286 agcacggccagcgccagcgcg 167306
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 agcacggccagcgccagcgcg 469 ||||||||||||||||||||| Sbjct: 79286 agcacggccagcgccagcgcg 79306
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 47926 gccggtgatcttgccgatgcg 47906
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 59662 gccggtgatcttgccgatgcg 59682
>emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, padA gene, padB gene, padC gene, padD gene, padE gene, padF gene, padG gene, padH gene, padI gene, padJ gene, ORFA, ORFB and ORFC Length = 16922 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gccggtgatcttgccgatgcg 522 ||||||||||||||||||||| Sbjct: 12165 gccggtgatcttgccgatgcg 12145
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 27868939 gccccacgagttcctgacgatccagtact 27868911
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gccagcgccagcgcgtcctcg 475 ||||||||||||||||||||| Sbjct: 2818876 gccagcgccagcgcgtcctcg 2818896
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 gagcacggccagcgccagcgc 468 ||||||||||||||||||||| Sbjct: 866198 gagcacggccagcgccagcgc 866178
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 77017 gccccacgagttcctgacgatccagtact 76989
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 ggccccacgagttcttggcgatccagtac 304 ||||||||||||||||| |||||||||| Sbjct: 733 ggccccacgagttcttgatgatccagtac 705
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 ggccccacgagttcttggcgatccagtac 304 ||||||||||||||||| |||||||||| Sbjct: 1489 ggccccacgagttcttgatgatccagtac 1461
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 955 gccccacgagttcctgacgatccagtact 927
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtact 305 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_528595.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 13J1 (LOC473225), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tctgcagcacggagccgctc 418 |||||||||||||||||||| Sbjct: 68 tctgcagcacggagccgctc 87
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 1023 gccccacgagttcttgatgatccagtac 996
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cggtgaccccgtagccgacc 337 |||||||||||||||||||| Sbjct: 1075 cggtgaccccgtagccgacc 1056
>gb|BT017224.1| Zea mays clone EL01N0302C04.c mRNA sequence Length = 617 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cggtgaccccgtagccgacc 337 |||||||||||||||||||| Sbjct: 187 cggtgaccccgtagccgacc 168
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 agccgctcccgtcgatctggacgg 434 ||||||||| |||||||||||||| Sbjct: 9277 agccgctccggtcgatctggacgg 9254
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 agccgctcccgtcgatctggacgg 434 ||||||||| |||||||||||||| Sbjct: 109965 agccgctccggtcgatctggacgg 109942
>gb|AF117829.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 320187 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aatgcatcttattttaatag 137 |||||||||||||||||||| Sbjct: 110251 aatgcatcttattttaatag 110270
>ref|XM_757119.1| Ustilago maydis 521 hypothetical protein (UM06065.1) partial mRNA Length = 2055 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcgatccagtactcttctcc 312 |||||||||||||||||||| Sbjct: 551 gcgatccagtactcttctcc 532
>ref|XM_848249.1| PREDICTED: Canis familiaris similar to TSPY-like 5 (LOC610706), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tgagcacggccagcgccagc 466 |||||||||||||||||||| Sbjct: 948 tgagcacggccagcgccagc 929
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 acgccggtgatcttgccgat 519 |||||||||||||||||||| Sbjct: 272680 acgccggtgatcttgccgat 272699
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 276 ggccccacgagttcttggcgatccagta 303 |||||||||||||||| |||||||||| Sbjct: 820 ggccccacgagttcttcacgatccagta 793
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggccagcgccagcgcgtcct 473 |||||||||||||||||||| Sbjct: 2231910 ggccagcgccagcgcgtcct 2231891
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 2163 gccccacgagttcttcacgatccagtac 2136
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 21955 gccccacgagttcttgatgatccagtac 21928
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acatgacgggataagcaccg 196 |||||||||||||||||||| Sbjct: 130625 acatgacgggataagcaccg 130644
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 1026 gccccacgagttcttcacgatccagtac 999
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 562 gccccacgagttcttcacgatccagtac 535
>emb|CR857593.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1115 (from clone DKFZp469H1115) Length = 4699 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 agcacggccagcgccagcgc 468 |||||||||||||||||||| Sbjct: 139 agcacggccagcgccagcgc 158
>dbj|AK125157.1| Homo sapiens cDNA FLJ43167 fis, clone FCBBF3004041 Length = 2595 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 agcacggccagcgccagcgc 468 |||||||||||||||||||| Sbjct: 171 agcacggccagcgccagcgc 190
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 gcatcttattttaatagcacatta 144 |||| ||||||||||||||||||| Sbjct: 51108 gcattttattttaatagcacatta 51085
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 933 gccccacgagttcttcacgatccagtac 906
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 936 gccccacgagttcttcacgatccagtac 909
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 984 gccccacgagttcttcacgatccagtac 957
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 1102 gccccacgagttcttcacgatccagtac 1075
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 27756 gccccacgagttcttcacgatccagtac 27729
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 1291 gccccacgagttcttcacgatccagtac 1264
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acatgacgggataagcaccg 196 |||||||||||||||||||| Sbjct: 18662759 acatgacgggataagcaccg 18662778 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 14184189 gccccacgagttcttgatgatccagtac 14184162
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacacatatatatagtaaca 20 |||||||||||||||||||| Sbjct: 21018144 cacacatatatatagtaaca 21018163
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acatgacgggataagcaccg 196 |||||||||||||||||||| Sbjct: 11897 acatgacgggataagcaccg 11916
>dbj|AB186750.1| Sphingomonas paucimobilis orf1, orf2, ligM, metF, ligH genes for putative formaldehyde dehydrogenase, putative alkyl salicylate esterase, vanillate/3-O-methylgallate O-demethylase, 5,10-methylenetetrahydrofolate reductase, 10-formyltetrahydrofolate synthetase, partial and complete cds Length = 9491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 cagcgccagcgcgtcctcgt 476 |||||||||||||||||||| Sbjct: 4155 cagcgccagcgcgtcctcgt 4136
>gb|AC154249.2| Mus musculus BAC clone RP24-188L2 from chromosome 14, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 catatatatagtaacaatat 24 |||||||||||||||||||| Sbjct: 133767 catatatatagtaacaatat 133786
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 agcacggccagcgccagcgc 468 |||||||||||||||||||| Sbjct: 79442 agcacggccagcgccagcgc 79461
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cattaatgcatcttatttta 133 |||||||||||||||||||| Sbjct: 5887 cattaatgcatcttatttta 5868
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cattaatgcatcttatttta 133 |||||||||||||||||||| Sbjct: 168046 cattaatgcatcttatttta 168027
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 cggccagcgccagcgcgtcc 472 |||||||||||||||||||| Sbjct: 4497676 cggccagcgccagcgcgtcc 4497657 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 cgatgcgtcgggcggcgtcg 535 |||||||||||||||||||| Sbjct: 2388963 cgatgcgtcgggcggcgtcg 2388944
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 ccccacgagttcttggcgatccagtact 305 ||||||||||||||| ||||||||||| Sbjct: 92619 ccccacgagttcttgatgatccagtact 92646
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacacatatatatagtaaca 20 |||||||||||||||||||| Sbjct: 141616 cacacatatatatagtaaca 141635
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacacatatatatagtaaca 20 |||||||||||||||||||| Sbjct: 19889 cacacatatatatagtaaca 19908
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 1591 gccccacgagttcttgatgatccagtac 1564
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 ccccacgagttcttggcgatccagtact 305 ||||||||||||||| ||||||||||| Sbjct: 602 ccccacgagttcttgatgatccagtact 575
>gb|AC004459.1|AC004459 Homo sapiens BAC clone CTA-273G1 from 8q21, complete sequence Length = 41798 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aatgcatcttattttaatag 137 |||||||||||||||||||| Sbjct: 12236 aatgcatcttattttaatag 12255
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 ccccacgagttcttggcgatccagtact 305 |||||||||||||| |||||||||||| Sbjct: 1000 ccccacgagttcttcacgatccagtact 973
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 278 ccccacgagttcttggcgatccagtact 305 |||||||||||||| |||||||||||| Sbjct: 1009 ccccacgagttcttcacgatccagtact 982
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cacacatatatatagtaaca 20 |||||||||||||||||||| Sbjct: 123312 cacacatatatatagtaaca 123331
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cggtgaccccgtagccgacc 337 |||||||||||||||||||| Sbjct: 371 cggtgaccccgtagccgacc 390
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 acgagttcttggcgatccagtact 305 ||||||||||| |||||||||||| Sbjct: 1035 acgagttcttgacgatccagtact 1012
>gb|AY104208.1| Zea mays PCO086864 mRNA sequence Length = 941 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 gagcacggccagcgccagcg 467 |||||||||||||||||||| Sbjct: 224 gagcacggccagcgccagcg 205
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 accatgatataatactaactacat 180 ||||| |||||||||||||||||| Sbjct: 96723 accataatataatactaactacat 96700
>emb|BX538329.1|HSM806598 Homo sapiens mRNA; cDNA DKFZp686L14188 (from clone DKFZp686L14188) Length = 3819 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aatgcatcttattttaatag 137 |||||||||||||||||||| Sbjct: 293 aatgcatcttattttaatag 274
>emb|CR848667.23| Zebrafish DNA sequence from clone CH211-257P13 in linkage group 15, complete sequence Length = 157566 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatagtaacaatatcg 26 |||||||||||||||||||| Sbjct: 134785 tatatatagtaacaatatcg 134804
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 ||||||||||||||| ||||||||||| Sbjct: 1136 gccccacgagttcttcacgatccagtac 1109
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 gccccacgagttcttggcgatccagtac 304 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,607,204 Number of Sequences: 3902068 Number of extensions: 4607204 Number of successful extensions: 153473 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 151623 Number of HSP's gapped (non-prelim): 1848 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
