ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17l02 |
|---|---|
| Clone Library Name | barley_pub |
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 139 bits (350), Expect = 3e-33 Identities = 68/74 (91%), Positives = 70/74 (94%) Frame = -3 Query: 423 TDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 TDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIG AHLYVFNNGE DIK+S Sbjct: 504 TDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGEADIKISH 563 Query: 243 LKAWEMKKPMMNGA 202 LKAWEMKKP+MNGA Sbjct: 564 LKAWEMKKPLMNGA 577
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 134 bits (336), Expect = 1e-31 Identities = 64/73 (87%), Positives = 69/73 (94%) Frame = -3 Query: 420 DISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQL 241 DISSGKI+LRSLIDRSVVESFGAGGKTCILSRVYPS+A+GKDAHLYVFNNGE D+ VS L Sbjct: 518 DISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPSIAVGKDAHLYVFNNGEVDVTVSGL 577 Query: 240 KAWEMKKPMMNGA 202 AWEMKKP+MNGA Sbjct: 578 TAWEMKKPLMNGA 590
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 127 bits (319), Expect = 1e-29 Identities = 64/75 (85%), Positives = 70/75 (93%), Gaps = 1/75 (1%) Frame = -3 Query: 423 TDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 TDI++GKISLRSLIDRSVVESFGAGGK CILSRVYPS+AIGK+A LYVFNNG+ +IKVSQ Sbjct: 524 TDITNGKISLRSLIDRSVVESFGAGGKACILSRVYPSLAIGKNARLYVFNNGKAEIKVSQ 583 Query: 243 LKAWEMKKP-MMNGA 202 L AWEMKKP MMNGA Sbjct: 584 LTAWEMKKPVMMNGA 598
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 105 bits (262), Expect = 4e-23 Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 1/72 (1%) Frame = -3 Query: 420 DISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 DI+ K I+LR+LID SVVESFGA GKTCIL+RVYP A+G DAHL+VFNNGE+D+KV+ Sbjct: 512 DIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFVFNNGESDVKVTN 571 Query: 243 LKAWEMKKPMMN 208 L AWEMK P MN Sbjct: 572 LDAWEMKTPKMN 583
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 95.5 bits (236), Expect = 5e-20 Identities = 46/64 (71%), Positives = 52/64 (81%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 KISLRSLID SVVESFGA GKTCI SRVYP++A+ ++AHLYVFNNG I V L AW M Sbjct: 526 KISLRSLIDNSVVESFGAKGKTCISSRVYPTLAVYENAHLYVFNNGSETITVENLDAWSM 585 Query: 225 KKPM 214 KKP+ Sbjct: 586 KKPL 589
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 91.3 bits (225), Expect = 9e-19 Identities = 44/70 (62%), Positives = 52/70 (74%) Frame = -3 Query: 420 DISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQL 241 D+S KISLRSLID SVVESFGA G+TCI SRVYP +AI +AH++VFNNG I + L Sbjct: 519 DLSDKKISLRSLIDNSVVESFGAHGRTCITSRVYPKIAIYNNAHVFVFNNGTEAITIDSL 578 Query: 240 KAWEMKKPMM 211 AW MK P + Sbjct: 579 DAWSMKAPSL 588
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 89.4 bits (220), Expect = 3e-18 Identities = 39/66 (59%), Positives = 50/66 (75%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 KISLR+LIDRS VESFG GG+ CI++RVYP+ + H+Y FNNG + +KVSQLKAW M Sbjct: 521 KISLRTLIDRSAVESFGGGGRACIMARVYPAAVVDGATHMYAFNNGSSTVKVSQLKAWSM 580 Query: 225 KKPMMN 208 + +N Sbjct: 581 TRAQVN 586
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 84.0 bits (206), Expect = 1e-16 Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 1/74 (1%) Frame = -3 Query: 420 DISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 DI K ISLR+LID S++ESFG GG+ CI +RVYP A +HLYVFNNG + VS+ Sbjct: 444 DIQKDKSISLRTLIDHSMIESFGGGGRACITTRVYPEHAATSSSHLYVFNNGSGTVNVSK 503 Query: 243 LKAWEMKKPMMNGA 202 L+AWEM +N A Sbjct: 504 LEAWEMATATVNSA 517
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 84.0 bits (206), Expect = 1e-16 Identities = 43/68 (63%), Positives = 48/68 (70%) Frame = -3 Query: 420 DISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQL 241 D+S KISLRSLID SVVESFGA K I SRVYP++AI +AHL+VFNNG I V L Sbjct: 512 DLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLAIYNNAHLFVFNNGTEPITVDNL 571 Query: 240 KAWEMKKP 217 AW M P Sbjct: 572 DAWSMNSP 579
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 80.5 bits (197), Expect = 2e-15 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Frame = -3 Query: 420 DISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 DI K ISLR+LID SVVESFG GG+ CI +RVYP +HLYVFNNG +KV++ Sbjct: 502 DIDDHKTISLRTLIDHSVVESFGGGGRACITARVYPEHVATSSSHLYVFNNGSDAVKVAK 561 Query: 243 LKAWEMKKPMMN 208 L+AW++ +N Sbjct: 562 LEAWDLATATVN 573
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 79.7 bits (195), Expect = 3e-15 Identities = 36/65 (55%), Positives = 47/65 (72%) Frame = -3 Query: 402 ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMK 223 ISLR+LID S+VESFG GG+TC+ +RVYP +HLYVFNN +KVS+L+AWE+ Sbjct: 513 ISLRTLIDHSIVESFGGGGRTCMTARVYPEHVATGSSHLYVFNNASDAVKVSKLEAWELA 572 Query: 222 KPMMN 208 +N Sbjct: 573 TASVN 577
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 68.2 bits (165), Expect = 8e-12 Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNG-ETDIKVSQLKAWE 229 K+SLR L+D S+VESF GG+TCI SRVYP+ AI A L++FNN ET++ S LK W+ Sbjct: 566 KLSLRILVDHSIVESFAQGGRTCITSRVYPTRAIYGAARLFLFNNAIETNVTAS-LKVWQ 624 Query: 228 M 226 M Sbjct: 625 M 625
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 67.8 bits (164), Expect = 1e-11 Identities = 31/60 (51%), Positives = 40/60 (66%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 K SLR L+D S+VESF GG+TC+ SRVYP+ AI A L++FNN + LK W+M Sbjct: 574 KFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQM 633
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 67.4 bits (163), Expect = 1e-11 Identities = 31/60 (51%), Positives = 40/60 (66%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 K SLR L+D S+VESF GG+TC+ SRVYP+ AI A L++FNN + LK W+M Sbjct: 576 KFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASLKIWQM 635
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 63.2 bits (152), Expect = 3e-10 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = -3 Query: 402 ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNG-ETDIKVSQLKAWEM 226 +S+R L+D S+VESF GG+TCI SRVYP+ AI A +++FNN +K +K W++ Sbjct: 596 LSVRILVDHSIVESFAQGGRTCITSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQL 655
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 61.2 bits (147), Expect = 1e-09 Identities = 28/61 (45%), Positives = 39/61 (63%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 K +R L+D S+VESF GG+T I SR+YP+ A+ A L+VFNN I + LK W + Sbjct: 568 KHRMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGAIVTASLKIWSL 627 Query: 225 K 223 + Sbjct: 628 E 628
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 60.8 bits (146), Expect = 1e-09 Identities = 28/59 (47%), Positives = 40/59 (67%) Frame = -3 Query: 402 ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 +S+R L+D S+VESF GG+T I SRVYP+ AI A +++FNN + +KAW+M Sbjct: 590 LSMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQM 648
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 59.7 bits (143), Expect = 3e-09 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 226 K S+R L+D S+VESF GG+T I SR+YP+ A+ A L+VFNN + +K W + Sbjct: 564 KHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSL 623 Query: 225 K 223 + Sbjct: 624 E 624
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 51.6 bits (122), Expect = 8e-07 Identities = 24/40 (60%), Positives = 31/40 (77%) Frame = -3 Query: 405 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHL 286 K+SLR+LID SVVESFG G+ C+ +RVYP++AI A L Sbjct: 510 KLSLRTLIDHSVVESFGGEGRACVTARVYPTLAIHDKAML 549
>SACC_BACSU (P05656) Levanase precursor (EC 3.2.1.65) (2,6-beta-D-fructan| fructanohydrolase) Length = 677 Score = 40.4 bits (93), Expect = 0.002 Identities = 25/64 (39%), Positives = 32/64 (50%) Frame = -3 Query: 411 SGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAW 232 +GK+ LR +DRS VE FG GK I + P + K LY N G +KV L Sbjct: 452 NGKVKLRIFVDRSSVEVFGNDGKQVITDIILPDRS-SKGLELYAANGG---VKVKSLTIH 507 Query: 231 EMKK 220 +KK Sbjct: 508 PLKK 511
>PQQE_PSEAE (Q9I2C0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 381 Score = 32.0 bits (71), Expect = 0.62 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCP++C + ++ AR A LST +W+E F Sbjct: 22 LTYRCPLQCPYCSNPLEFAREGAELSTAEWIEVF 55
>PQQE_METEX (P71517) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 384 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWL 69 L HRCP+RC + ++ + R A L T WL Sbjct: 24 LTHRCPLRCPYCSNPLELDRRSAELDTQTWL 54
>INU2_ASPFI (O94220) Inulinase precursor (EC 3.2.1.7)| (2,1-beta-D-fructanfructanohydrolase) (Inulase) Length = 516 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 411 SGKISLRSLIDRSVVESFGAGGKTCILSRVYPS 313 +G +S+R L+D VE FG G+ I ++PS Sbjct: 456 TGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPS 488
>PQQE_RHIME (Q9EXU8) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 375 Score = 29.6 bits (65), Expect = 3.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L HRCP+ C + ++ + + K LST +W F Sbjct: 28 LTHRCPLACPYCSNPIALTQAKEELSTEEWTGVF 61
>TPO_MOUSE (P40226) Thrombopoietin precursor (Megakaryocyte colony-stimulating| factor) (Myeloproliferative leukemia virus oncogene ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and development factor) (MGDF) Length = 356 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +2 Query: 305 IAMDGYTLERMQVFPPAPKLSTTERSIKLLKEIFPD 412 +A DG+T FPP+P L TT S L +FPD Sbjct: 299 LAPDGHT-----PFPPSPALPTTHGSPPQLHPLFPD 329
>PQQE_KLEPN (P27507) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 380 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCP++C + ++ AR L+T +W+E F Sbjct: 18 LTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVF 51
>RAFD_ECOLI (P16553) Raffinose invertase (EC 3.2.1.26) (Invertase)| Length = 476 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 402 ISLRSLIDRSVVESFGAGGKTCILSRVYP 316 ++LR +DRS VE F G+ + SR+YP Sbjct: 421 LTLRIFLDRSSVEVFVNDGEATLSSRIYP 449
>PQQE_ACIAD (Q6F9I9) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 386 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCP++C + ++ A +K LST +W + F Sbjct: 19 LTYRCPLQCAYCSNPLDYAAVKQELSTDEWKDVF 52
>GP149_CHICK (Q9DDD1) Probable G-protein coupled receptor 149 (G-protein coupled| receptor R35) Length = 723 Score = 28.9 bits (63), Expect = 5.3 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +2 Query: 8 IFLFITYITCWKPSTAQQIPLTTSTCSKRPSDEQLITHVL*IDIER 145 +FLFI Y C+ T +PLT SDEQ + HV +I R Sbjct: 191 LFLFIVYSLCFCLLTVLSVPLTYQLLC---SDEQQLLHVNYQEISR 233
>PQQE_ENTIT (P59748) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 374 Score = 28.9 bits (63), Expect = 5.3 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCP++C + ++ ++ K L+T +W+E F Sbjct: 17 LTYRCPLQCPYCSNPLDFSQQKKELTTEQWIEVF 50
>PQQE_ENTAG (Q01060) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 377 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCP++C + ++ A + LST +W+E F Sbjct: 18 LTYRCPLQCPYCSNPLDFAAQEKELSTEQWIEVF 51
>MRAW_STRMU (Q8DVM7) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 316 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 357 GAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKK 220 GAG C+LS+ +GK+ HLY F+ + I ++++ + K Sbjct: 34 GAGHSECLLSK------LGKEGHLYCFDQDQKAIDNAKIRLQQYVK 73
>FRUA_STRMU (Q03174) Fructan beta-fructosidase precursor (EC 3.2.1.80)| (Exo-beta-D-fructosidase) (Fructanase) Length = 1423 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 423 TDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQ 244 T + G I L +DR+ VE F ++++P+ + + + DI V Q Sbjct: 851 TKNADGSIDLHIYVDRASVEVFSKNNTVAGANQIFPNPEAVGASIIVEGGKAQADISVYQ 910 Query: 243 LKA-WEMKK 220 +K W KK Sbjct: 911 MKTIWTDKK 919
>HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1)| Length = 1046 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 277 EHVEMRVFPDRHGRVHSREDAGLPSGAEALNHGTVDQAS 393 EH ++ P H HS+ DAG PS A NH T A+ Sbjct: 152 EHSNIKASPTAHR--HSKGDAGHPSIATTHNHSTSKAAT 188
>PQQE_RHOPA (Q6N8F3) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 377 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KW 72 L HRCP++C + ++ + R A LST +W Sbjct: 22 LTHRCPLQCPYCSNPLELERGGAELSTDEW 51
>BMAL1_RAT (Q9EPW1) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) (Tic) Length = 626 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 334 DAGLPSGAEALNHGTVDQASQGDLPG 411 DA P G + LN GT D S G LPG Sbjct: 531 DASSPGGKKILNGGTPDIPSAGLLPG 556
>BMAL1_MESAU (O88529) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) Length = 626 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 334 DAGLPSGAEALNHGTVDQASQGDLPG 411 DA P G + LN GT D S G LPG Sbjct: 531 DASSPGGKKILNGGTPDIPSTGLLPG 556
>BMAL1_MOUSE (Q9WTL8) Aryl hydrocarbon receptor nuclear translocator-like| protein 1 (Brain and muscle ARNT-like 1) (Arnt3) Length = 632 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 334 DAGLPSGAEALNHGTVDQASQGDLPG 411 DA P G + LN GT D S G LPG Sbjct: 537 DASSPGGKKILNGGTPDIPSTGLLPG 562
>PQQE_RAHAQ (O33506) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 377 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -1 Query: 161 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 60 L +RCPV+C + ++ A+ + L+T +W++ F Sbjct: 18 LTYRCPVQCPYWSNPLDFAKQEKELTTAQWIKVF 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,270,044 Number of Sequences: 219361 Number of extensions: 1213126 Number of successful extensions: 3703 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3631 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3703 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
