ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17l01 |
|---|---|
| Clone Library Name | barley_pub |
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 163 bits (412), Expect = 3e-40 Identities = 82/90 (91%), Positives = 84/90 (93%) Frame = -1 Query: 496 LSPRGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDA 317 LSP LYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIG A Sbjct: 489 LSP-DLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKA 547 Query: 316 HLYVFNNGETDIKVSQLKAWEMKKPMMNGA 227 HLYVFNNGE DIK+S LKAWEMKKP+MNGA Sbjct: 548 HLYVFNNGEADIKISHLKAWEMKKPLMNGA 577
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 157 bits (398), Expect = 1e-38 Identities = 78/90 (86%), Positives = 83/90 (92%) Frame = -1 Query: 496 LSPRGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDA 317 LSP LYKPTFAGFVD DISSGKI+LRSLIDRSVVESFGAGGKTCILSRVYPS+A+GKDA Sbjct: 502 LSP-DLYKPTFAGFVDADISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPSIAVGKDA 560 Query: 316 HLYVFNNGETDIKVSQLKAWEMKKPMMNGA 227 HLYVFNNGE D+ VS L AWEMKKP+MNGA Sbjct: 561 HLYVFNNGEVDVTVSGLTAWEMKKPLMNGA 590
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 148 bits (373), Expect = 9e-36 Identities = 73/86 (84%), Positives = 81/86 (94%), Gaps = 1/86 (1%) Frame = -1 Query: 481 LYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVF 302 +Y+PTFAGFVDTDI++GKISLRSLIDRSVVESFGAGGK CILSRVYPS+AIGK+A LYVF Sbjct: 513 MYQPTFAGFVDTDITNGKISLRSLIDRSVVESFGAGGKACILSRVYPSLAIGKNARLYVF 572 Query: 301 NNGETDIKVSQLKAWEMKKP-MMNGA 227 NNG+ +IKVSQL AWEMKKP MMNGA Sbjct: 573 NNGKAEIKVSQLTAWEMKKPVMMNGA 598
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 126 bits (317), Expect = 3e-29 Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 1/84 (1%) Frame = -1 Query: 481 LYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYV 305 +Y+PTFAGFVD DI+ K I+LR+LID SVVESFGA GKTCIL+RVYP A+G DAHL+V Sbjct: 500 IYRPTFAGFVDVDIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYPRKAVGDDAHLFV 559 Query: 304 FNNGETDIKVSQLKAWEMKKPMMN 233 FNNGE+D+KV+ L AWEMK P MN Sbjct: 560 FNNGESDVKVTNLDAWEMKTPKMN 583
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 117 bits (292), Expect = 2e-26 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 1/83 (1%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLY 308 GLY+P+FAGFVD D+++ K ISLRSLID SVVESFGA GKTCI SRVYP++A+ ++AHLY Sbjct: 507 GLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYPTLAVYENAHLY 566 Query: 307 VFNNGETDIKVSQLKAWEMKKPM 239 VFNNG I V L AW MKKP+ Sbjct: 567 VFNNGSETITVENLDAWSMKKPL 589
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 113 bits (282), Expect = 3e-25 Identities = 54/83 (65%), Positives = 63/83 (75%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYV 305 GLYKP FAG+VD D+S KISLRSLID SVVESFGA G+TCI SRVYP +AI +AH++V Sbjct: 506 GLYKPPFAGYVDVDLSDKKISLRSLIDNSVVESFGAHGRTCITSRVYPKIAIYNNAHVFV 565 Query: 304 FNNGETDIKVSQLKAWEMKKPMM 236 FNNG I + L AW MK P + Sbjct: 566 FNNGTEAITIDSLDAWSMKAPSL 588
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 105 bits (263), Expect = 5e-23 Identities = 53/81 (65%), Positives = 59/81 (72%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYV 305 GLYKP+F GFVD D+S KISLRSLID SVVESFGA K I SRVYP++AI +AHL+V Sbjct: 499 GLYKPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPTLAIYNNAHLFV 558 Query: 304 FNNGETDIKVSQLKAWEMKKP 242 FNNG I V L AW M P Sbjct: 559 FNNGTEPITVDNLDAWSMNSP 579
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 101 bits (251), Expect = 1e-21 Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 1/85 (1%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLY 308 GLY P + GF + D+ K ISLR+LIDRS VESFG GG+ CI++RVYP+ + H+Y Sbjct: 502 GLYTPAYGGFFEYDLEKEKKISLRTLIDRSAVESFGGGGRACIMARVYPAAVVDGATHMY 561 Query: 307 VFNNGETDIKVSQLKAWEMKKPMMN 233 FNNG + +KVSQLKAW M + +N Sbjct: 562 AFNNGSSTVKVSQLKAWSMTRAQVN 586
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 99.8 bits (247), Expect = 4e-21 Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 1/85 (1%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLY 308 G+YKP + GFVD DI K ISLR+LID SVVESFG GG+ CI +RVYP +HLY Sbjct: 489 GVYKPAYGGFVDMDIDDHKTISLRTLIDHSVVESFGGGGRACITARVYPEHVATSSSHLY 548 Query: 307 VFNNGETDIKVSQLKAWEMKKPMMN 233 VFNNG +KV++L+AW++ +N Sbjct: 549 VFNNGSDAVKVAKLEAWDLATATVN 573
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 98.2 bits (243), Expect = 1e-20 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -1 Query: 481 LYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYV 305 +YK + GFVD DI K ISLR+LID S++ESFG GG+ CI +RVYP A +HLYV Sbjct: 432 VYKDAYGGFVDVDIQKDKSISLRTLIDHSMIESFGGGGRACITTRVYPEHAATSSSHLYV 491 Query: 304 FNNGETDIKVSQLKAWEMKKPMMNGA 227 FNNG + VS+L+AWEM +N A Sbjct: 492 FNNGSGTVNVSKLEAWEMATATVNSA 517
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 97.8 bits (242), Expect = 1e-20 Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = -1 Query: 493 SPRGLYKPTFAGFVDTDISSGK-ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDA 317 S G+YKP+ GFVD DI + ISLR+LID S+VESFG GG+TC+ +RVYP + Sbjct: 490 SRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSIVESFGGGGRTCMTARVYPEHVATGSS 549 Query: 316 HLYVFNNGETDIKVSQLKAWEMKKPMMN 233 HLYVFNN +KVS+L+AWE+ +N Sbjct: 550 HLYVFNNASDAVKVSKLEAWELATASVN 577
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 69.3 bits (168), Expect = 5e-12 Identities = 35/80 (43%), Positives = 46/80 (57%) Frame = -1 Query: 490 PRGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHL 311 P + K F V + K SLR L+D S+VESF GG+TC+ SRVYP+ AI A L Sbjct: 557 PNDVRKQIFGNIVPV-LEGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARL 615 Query: 310 YVFNNGETDIKVSQLKAWEM 251 ++FNN + LK W+M Sbjct: 616 FLFNNATEATVTASLKIWQM 635
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 68.6 bits (166), Expect = 9e-12 Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Frame = -1 Query: 460 GFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNG-ETD 284 G V + K+SLR L+D S+VESF GG+TCI SRVYP+ AI A L++FNN ET+ Sbjct: 556 GSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTRAIYGAARLFLFNNAIETN 615 Query: 283 IKVSQLKAWEM 251 + S LK W+M Sbjct: 616 VTAS-LKVWQM 625
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 68.2 bits (165), Expect = 1e-11 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = -1 Query: 460 GFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDI 281 G V + K SLR L+D S+VESF GG+TC+ SRVYP+ AI A L++FNN Sbjct: 564 GSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEAT 623 Query: 280 KVSQLKAWEM 251 + LK W+M Sbjct: 624 VTASLKVWQM 633
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 63.2 bits (152), Expect = 4e-10 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = -1 Query: 427 ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNG-ETDIKVSQLKAWEM 251 +S+R L+D S+VESF GG+TCI SRVYP+ AI A +++FNN +K +K W++ Sbjct: 596 LSVRILVDHSIVESFAQGGRTCITSRVYPTRAIYDSARVFLFNNATHAHVKAKSVKIWQL 655
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 61.6 bits (148), Expect = 1e-09 Identities = 31/79 (39%), Positives = 45/79 (56%) Frame = -1 Query: 484 GLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYV 305 G+ K + V + K +R L+D S+VESF GG+T I SR+YP+ A+ A L+V Sbjct: 551 GVAKQVYGSSVPV-LDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFV 609 Query: 304 FNNGETDIKVSQLKAWEMK 248 FNN I + LK W ++ Sbjct: 610 FNNATGAIVTASLKIWSLE 628
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/59 (47%), Positives = 40/59 (67%) Frame = -1 Query: 427 ISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 251 +S+R L+D S+VESF GG+T I SRVYP+ AI A +++FNN + +KAW+M Sbjct: 590 LSMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQM 648
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 59.7 bits (143), Expect = 4e-09 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = -1 Query: 430 KISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEM 251 K S+R L+D S+VESF GG+T I SR+YP+ A+ A L+VFNN + +K W + Sbjct: 564 KHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSL 623 Query: 250 K 248 + Sbjct: 624 E 624
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 57.8 bits (138), Expect = 2e-08 Identities = 28/53 (52%), Positives = 37/53 (69%) Frame = -1 Query: 469 TFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHL 311 ++ FVD D K+SLR+LID SVVESFG G+ C+ +RVYP++AI A L Sbjct: 497 SYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTARVYPTLAIHDKAML 549
>SACC_BACSU (P05656) Levanase precursor (EC 3.2.1.65) (2,6-beta-D-fructan| fructanohydrolase) Length = 677 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/64 (39%), Positives = 32/64 (50%) Frame = -1 Query: 436 SGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAW 257 +GK+ LR +DRS VE FG GK I + P + K LY N G +KV L Sbjct: 452 NGKVKLRIFVDRSSVEVFGNDGKQVITDIILPDRS-SKGLELYAANGG---VKVKSLTIH 507 Query: 256 EMKK 245 +KK Sbjct: 508 PLKK 511
>TPO_MOUSE (P40226) Thrombopoietin precursor (Megakaryocyte colony-stimulating| factor) (Myeloproliferative leukemia virus oncogene ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and development factor) (MGDF) Length = 356 Score = 32.0 bits (71), Expect = 0.95 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +3 Query: 330 IAMDGYTLERMQVFPPAPKLSTTERSIKLLKEIFPD---EMSVSTNPANVGLY 479 +A DG+T FPP+P L TT S L +FPD M ST P V +Y Sbjct: 299 LAPDGHT-----PFPPSPALPTTHGSPPQLHPLFPDPSTTMPNSTAPHPVTMY 346
>PQQE_PSEAE (Q9I2C0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 381 Score = 32.0 bits (71), Expect = 0.95 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L +RCP++C + ++ AR A LST +W+E F Sbjct: 22 LTYRCPLQCPYCSNPLEFAREGAELSTAEWIEVF 55
>PQQE_METEX (P71517) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 384 Score = 30.4 bits (67), Expect = 2.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWL 94 L HRCP+RC + ++ + R A L T WL Sbjct: 24 LTHRCPLRCPYCSNPLELDRRSAELDTQTWL 54
>INU2_ASPFI (O94220) Inulinase precursor (EC 3.2.1.7)| (2,1-beta-D-fructanfructanohydrolase) (Inulase) Length = 516 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 436 SGKISLRSLIDRSVVESFGAGGKTCILSRVYPS 338 +G +S+R L+D VE FG G+ I ++PS Sbjct: 456 TGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPS 488
>PQQE_RHIME (Q9EXU8) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 375 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L HRCP+ C + ++ + + K LST +W F Sbjct: 28 LTHRCPLACPYCSNPIALTQAKEELSTEEWTGVF 61
>RAFD_ECOLI (P16553) Raffinose invertase (EC 3.2.1.26) (Invertase)| Length = 476 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 Query: 427 ISLRSLIDRSVVESFGAGGKTCILSRVYP 341 ++LR +DRS VE F G+ + SR+YP Sbjct: 421 LTLRIFLDRSSVEVFVNDGEATLSSRIYP 449
>PQQE_KLEPN (P27507) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 380 Score = 29.3 bits (64), Expect = 6.2 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L +RCP++C + ++ AR L+T +W+E F Sbjct: 18 LTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVF 51
>DAPF_XANAC (Q8PPQ1) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 28.9 bits (63), Expect = 8.1 Identities = 18/72 (25%), Positives = 33/72 (45%) Frame = +2 Query: 263 LELGYLDIRLPIVEHVEMRVFPDRHGRVHSREDAGLPSGAEALNHGTVDQASQGDLPG*N 442 + +G+ + P+ HV +RVF G + + A + G V++ Q LPG Sbjct: 199 VNVGFAQVVDPV--HVRLRVFERGVGETLACGSGACAAAAVLMQRGRVERDVQVSLPGGE 256 Query: 443 VGVDEPGERRLV 478 + + PG++ V Sbjct: 257 LRIRWPGDQEQV 268
>PQQE_ACIAD (Q6F9I9) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 386 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L +RCP++C + ++ A +K LST +W + F Sbjct: 19 LTYRCPLQCAYCSNPLDYAAVKQELSTDEWKDVF 52
>PQQE_ENTAG (Q01060) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 377 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L +RCP++C + ++ A + LST +W+E F Sbjct: 18 LTYRCPLQCPYCSNPLDFAAQEKELSTEQWIEVF 51
>PQQE_ENTIT (P59748) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 374 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -2 Query: 186 LRHRCPVRCRFTTHE*LIARLKASLST*KWLEEF 85 L +RCP++C + ++ ++ K L+T +W+E F Sbjct: 17 LTYRCPLQCPYCSNPLDFSQQKKELTTEQWIEVF 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,600,951 Number of Sequences: 219361 Number of extensions: 1401256 Number of successful extensions: 4091 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4085 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
