ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd17k20 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 224 bits (570), Expect = 1e-58 Identities = 108/108 (100%), Positives = 108/108 (100%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN Sbjct: 357 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 416 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 417 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 174 bits (441), Expect = 9e-44 Identities = 82/108 (75%), Positives = 95/108 (87%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN Sbjct: 367 EKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDAN 426 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124 DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 427 ADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 170 bits (430), Expect = 2e-42 Identities = 78/106 (73%), Positives = 94/106 (88%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 +N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN Sbjct: 365 DNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDAN 424 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 130 +DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 425 KDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 166 bits (420), Expect = 3e-41 Identities = 80/110 (72%), Positives = 93/110 (84%), Gaps = 2/110 (1%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 + IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN Sbjct: 367 DTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDAN 426 Query: 267 QDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 124 DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 427 NDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 126 bits (317), Expect = 2e-29 Identities = 59/72 (81%), Positives = 67/72 (93%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN Sbjct: 354 ENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQAN 413 Query: 267 QDAMKTGSFYGK 232 DAMKTG+FYGK Sbjct: 414 DDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 124 bits (310), Expect = 1e-28 Identities = 58/71 (81%), Positives = 67/71 (94%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN Sbjct: 357 ENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDAN 416 Query: 267 QDAMKTGSFYG 235 DAMKTGSFYG Sbjct: 417 SDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 121 bits (303), Expect = 9e-28 Identities = 56/71 (78%), Positives = 67/71 (94%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 ++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN Sbjct: 367 DSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDAN 426 Query: 267 QDAMKTGSFYG 235 DAM TG+FYG Sbjct: 427 SDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 117 bits (292), Expect = 2e-26 Identities = 53/70 (75%), Positives = 66/70 (94%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN Sbjct: 363 ENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEAN 422 Query: 267 QDAMKTGSFY 238 +DAMKTGSF+ Sbjct: 423 EDAMKTGSFF 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 113 bits (283), Expect = 2e-25 Identities = 52/69 (75%), Positives = 65/69 (94%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 + IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDAN Sbjct: 367 DTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDAN 426 Query: 267 QDAMKTGSF 241 QDA+K G+F Sbjct: 427 QDAIKRGTF 435
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 110 bits (274), Expect = 2e-24 Identities = 53/69 (76%), Positives = 62/69 (89%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN Sbjct: 371 EAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDAN 430 Query: 267 QDAMKTGSF 241 DA+ TG+F Sbjct: 431 ADAINTGNF 439
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 110 bits (274), Expect = 2e-24 Identities = 52/70 (74%), Positives = 61/70 (87%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN Sbjct: 371 EKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDAN 430 Query: 267 QDAMKTGSFY 238 DA+ GSF+ Sbjct: 431 ADAINNGSFF 440
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 109 bits (273), Expect = 3e-24 Identities = 52/67 (77%), Positives = 62/67 (92%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN Sbjct: 366 ELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDAN 425 Query: 267 QDAMKTG 247 DA+ TG Sbjct: 426 ADAINTG 432
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 106 bits (265), Expect = 2e-23 Identities = 47/67 (70%), Positives = 65/67 (97%) Frame = -2 Query: 438 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDA 259 GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA Sbjct: 372 GKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDA 431 Query: 258 MKTGSFY 238 +K+GSF+ Sbjct: 432 IKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 105 bits (262), Expect = 5e-23 Identities = 47/70 (67%), Positives = 65/70 (92%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 +++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+AN Sbjct: 371 DSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNAN 430 Query: 267 QDAMKTGSFY 238 +DA+K+GSF+ Sbjct: 431 EDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 73.2 bits (178), Expect = 3e-13 Identities = 33/46 (71%), Positives = 41/46 (89%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 310 E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 364 ERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 52.8 bits (125), Expect = 4e-07 Identities = 28/56 (50%), Positives = 38/56 (67%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 280 + IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 340 DKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/50 (40%), Positives = 31/50 (62%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 298 EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +2 Query: 197 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 373 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 374 STVI 385 I Sbjct: 302 QAFI 305
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 30.8 bits (68), Expect = 1.7 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 Query: 417 RDGPVTFEQPKMTVEK 370 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 302 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 406 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -1 Query: 250 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 143 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169
>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 868 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = +1 Query: 238 VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 417 VEG+ HR L + + AHVG +LDI L DE V + G Sbjct: 671 VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728 Query: 418 RVHQPLANVLSL 453 + + +A V++L Sbjct: 729 KFNTAVAQVMTL 740
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +1 Query: 127 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 300 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 301 GVSKLHTLDIVLL 339 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCT 190 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCT 190 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCT 190 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)| Length = 214 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/86 (23%), Positives = 39/86 (45%) Frame = -2 Query: 447 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 268 E + K + + DGP++ E +T + ++E + + DNV V++ T A + Sbjct: 40 ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98 Query: 267 QDAMKTGSFYGKGAQQGTLPVPEGCT 190 ++ +KT QG + + G T Sbjct: 99 KEGIKTNVTLIFTVSQGLMAMKAGAT 124
>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 345 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 178 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 345 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 178 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 345 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 178 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 552 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -2 Query: 345 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 178 V E + +++ Y+++ ++ D+ D + G++YGKGA+ G + V GC D + Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 141 CRRRSLPLGRSSWHFGRCNLP 203 CRR P GR H GRCN P Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCP 2134
>S20A1_XENTR (Q5BL44) Sodium-dependent phosphate transporter 1 (Solute carrier| family 20 member 1) Length = 685 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +1 Query: 109 KVACLKGVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQ 282 +V G++ ++ P W++VLG ++ F G + + SF GT++ +V++ Q Sbjct: 9 EVTSALGIENVKIMEPFLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQ 65 Query: 283 SCLAHVGVSKLHTLDIVLL 339 +C+ S T+ VLL Sbjct: 66 ACIL---ASIFETVGSVLL 81
>BGS4_SCHPO (O74475) 1,3-beta-glucan synthase component bgs4 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1955 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = -2 Query: 345 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYD 166 V + N + Q AD Y ++ L A+ D+M YG+G P G T+ Y Sbjct: 28 VYDDQNAYQRQPADAYSNEEFLDQADYDSM-----YGEG--YNGYDYPTGVTESYGDEYT 80 Query: 165 PTARSDDGSCLYT 127 P + G Y+ Sbjct: 81 PVDTASSGINQYS 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,093,574 Number of Sequences: 219361 Number of extensions: 1181064 Number of successful extensions: 3246 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3245 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
