>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor|
           (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme
           4) (Subtilisin/kexin-like protease PACE4)
           (Subtilisin-like proprotein convertase 4) (SPC4)
          Length = 937

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -1

Query: 290 PRPWRQGPRGSWRLQRRIRWRGLSQPAACSGNPGPEPVPNPRWEVRLL 147
           PRPWR      W L        L+ PA CS  P P PV    W V++L
Sbjct: 28  PRPWR------WLLL-------LALPAVCSALPPPRPVYTNHWAVQVL 62

>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor|
           (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme
           4) (Subtilisin/kexin-like protease PACE4)
           (Subtilisin-like proprotein convertase 4) (SPC4)
          Length = 969

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = -1

Query: 290 PRPWRQGPRGSWRLQRRIRWRGLSQPAACSGNPGPEPVPNPRWEVRLL 147
           PRPWR      W L        L+ PAACS  P P PV    W V++L
Sbjct: 46  PRPWR------WLLL-------LALPAACSAPP-PRPVYTNHWAVQVL 79

>GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (GDF-6)|
           (Cartilage-derived morphogenetic protein 2) (CDMP-2)
           (Fragment)
          Length = 436

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 215 PAACSGNPGPEPVPNPRWEV 156
           PAA S  PGP   P P WEV
Sbjct: 168 PAAGSAEPGPAGAPRPGWEV 187

>HXA3_HETFR (Q9IA21) Homeobox protein Hox-A3|
          Length = 410

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 10/83 (12%)
 Frame = +1

Query: 94  LNLTESAILIKGWYSRRHSN----------LTSHRGLGTGSGPGLPEQAAGCDNPRHRIR 243
           LNLTE  I I  W+  R             LTS  G      P  P  A G  N  H + 
Sbjct: 205 LNLTERQIKI--WFQNRRMKYKKDQKAKGMLTSSGGQSPCRSPIPPSAAGGYANSMHSLA 262

Query: 244 L*SLHDPRGPCRHGLGHHRTFLL 312
             + +DP  P      H   + +
Sbjct: 263 TSAPYDPHSPTSFSKPHQNAYAI 285

>THIK_SALPA (Q5PGS9) Thiamine kinase (EC 2.7.1.89)|
          Length = 274

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 25/78 (32%), Positives = 33/78 (42%)
 Frame = +1

Query: 91  NLNLTESAILIKGWYSRRHSNLTSHRGLGTGSGPGLPEQAAGCDNPRHRIRL*SLHDPRG 270
           N  LT   IL + ++ +    +T+ +GL  GS            +  HRI L   HDP  
Sbjct: 6   NNPLTRDEILSR-YFPQYRPAVTASQGLSGGS--------CIIAHDTHRIVLRRHHDPDA 56

Query: 271 PCRHGLGHHRTFLLQQAS 324
           P  H L HHR      AS
Sbjct: 57  PPAHFLRHHRALSQLPAS 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,419,504
Number of Sequences: 219361
Number of extensions: 1178441
Number of successful extensions: 3919
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3913
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)