ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475752.1| Oryza sativa (japonica cultivar-group), predic... 236 5e-59
2dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 5e-59
3gb|BT016648.1| Zea mays clone Contig481 mRNA sequence 155 2e-34
4gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence 155 2e-34
5gb|AY103606.1| Zea mays PCO150737 mRNA sequence 155 2e-34
6ref|NM_191814.1| Oryza sativa (japonica cultivar-group), predic... 145 1e-31
7dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
8gb|AF113521.1|AF113521 Zea mays putative transcription factor mR... 141 2e-30
9dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
10gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
13dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
14gb|AY104818.1| Zea mays PCO063451 mRNA sequence 72 2e-09
15dbj|AB236828.1| Trifolium pratense RNA for putative nuclear anti... 70 7e-09
16dbj|AB236752.1| Trifolium pratense RNA for putative nuclear anti... 70 7e-09
17gb|AF110226.1| Nicotiana tabacum nuclear RNA binding protein (Rg... 58 3e-05
18gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (... 56 1e-04
19gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (... 56 1e-04
20ref|NM_117785.2| Arabidopsis thaliana RNA binding AT4G16830 mRNA... 52 0.002
21gb|DQ207876.1| Solanum tuberosum clone 092B12 nuclear RNA bindin... 52 0.002
22gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog (At... 52 0.002
23gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-lik... 52 0.002
24gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen hom... 52 0.002
25gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, comp... 52 0.002
26emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Co... 52 0.002
27dbj|AB236845.1| Trifolium pratense RNA for hypothetical protein,... 50 0.006
28emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance p... 50 0.006
29ref|XM_476001.1| Oryza sativa (japonica cultivar-group), predic... 48 0.026
30ref|NM_192656.1| Oryza sativa (japonica cultivar-group), predic... 48 0.026
31emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance p... 48 0.026
32dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
33dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
34gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete ... 46 0.10
35gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
36gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
37ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H... 44 0.40
38dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
39dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
40gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complet... 44 0.40
41gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, comple... 44 0.40
42emb|AJ007041.1|HSA7041 Homo sapiens mRNA for trithorax homologue 2 42 1.6
43emb|AL603650.10| Human DNA sequence from clone RP11-263F14 on ch... 42 1.6
44gb|AF042797.2| Takifugu rubripes FRG1 (FRG1), N-acylsphingosine ... 42 1.6
45gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109... 42 1.6
46gb|AF292120.1|AF292120 Takifugu rubripes clone 16-k18 squamous-c... 42 1.6
47gb|AF292119.1|AF292119 Takifugu rubripes clone 16-i12 squamous-c... 42 1.6
48ref|NM_058707.3| Caenorhabditis elegans LiPid Depleted family me... 42 1.6
49ref|NM_014727.1| Homo sapiens myeloid/lymphoid or mixed-lineage ... 42 1.6
50gb|AF186605.1|AF186605 Homo sapiens MLL2 protein mRNA, partial cds 42 1.6
51gb|AF043700.1| Caenorhabditis elegans cosmid K09H9, complete seq... 42 1.6
52gb|BC011812.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, m... 40 6.3
53gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.3
54ref|XM_519350.1| PREDICTED: Pan troglodytes similar to GRIP and ... 40 6.3
55ref|XM_527071.1| PREDICTED: Pan troglodytes similar to Homeobox ... 40 6.3
56ref|NM_028900.2| Mus musculus golgi coiled coil 1 (Gcc1), mRNA 40 6.3
57gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluste... 40 6.3
58gb|BC066807.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clon... 40 6.3
59ref|XM_953913.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
60ref|XM_331369.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
61gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.3
62gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, co... 40 6.3
63gb|AY710267.1| Banana virus X RNA-dependent RNA polymerase gene,... 40 6.3
64gb|BC021462.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clon... 40 6.3
65ref|XM_780125.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
66emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 6.3
67emb|CR859994.1| Pongo pygmaeus mRNA; cDNA DKFZp459H158 (from clo... 40 6.3
68emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 6.3
69emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 40 6.3
70gb|BC014100.2| Homo sapiens GRIP and coiled-coil domain containi... 40 6.3
71emb|AL833358.1|HSM804671 Homo sapiens mRNA; cDNA DKFZp667D0214 (... 40 6.3
72dbj|AK123129.1| Homo sapiens cDNA FLJ41134 fis, clone BRACE2027970 40 6.3
73dbj|AK092878.1| Homo sapiens cDNA FLJ35559 fis, clone SPLEN2005009 40 6.3
74gb|AF110227.1| Arabidopsis thaliana nuclear RNA binding protein ... 40 6.3
75gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, comp... 40 6.3
76gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, comp... 40 6.3
77ref|NM_001002762.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily... 40 6.3
78ref|NM_024523.5| Homo sapiens GRIP and coiled-coil domain contai... 40 6.3
79dbj|AK016531.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.3
80dbj|AK032253.1| Mus musculus adult male olfactory brain cDNA, RI... 40 6.3
81gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosom... 40 6.3
82gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, complete cds 40 6.3
83gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complet... 40 6.3
84gb|AF525417.1| Homo sapiens Golgi coiled coil protein 1 mRNA, co... 40 6.3
85gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete s... 40 6.3
86ref|XM_575413.1| PREDICTED: Rattus norvegicus similar to GRIP an... 40 6.3
87gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (CDX1)... 40 6.3
88dbj|AK025942.1| Homo sapiens cDNA: FLJ22289 fis, clone HRC04173 40 6.3
89gb|AC000359.1|HSAC000359 Human cosmid g1572c264, complete sequence 40 6.3
90gb|AC000357.1|HSAC000357 Human cosmid g1572c101, complete sequence 40 6.3
91emb|AJ324296.1|HSA324296 Homo sapiens genomic sequence surroundi... 40 6.3
92gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, comple... 40 6.3
93gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromos... 40 6.3
94ref|NM_001804.1| Homo sapiens caudal type homeobox transcription... 40 6.3
95gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 ... 40 6.3
96gb|U15212.1|HSU15212 Human caudal-type homeobox protein (CDX1) m... 40 6.3
97gb|AF086129.1|HUMZA83B04 Homo sapiens full length insert cDNA cl... 40 6.3
98emb|AL591977.1| Listeria monocytogenes strain EGD, complete geno... 40 6.3
99emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, co... 40 6.3
100gb|BC078665.1| Homo sapiens GRIP and coiled-coil domain containi... 40 6.3
101gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 6.3
102emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chr... 40 6.3
103gb|U16360.1|HSU16360 Human caudal-type homeobox protein (CDX1) g... 40 6.3 
>ref|XM_475752.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1173

 Score =  236 bits (119), Expect = 5e-59
 Identities = 193/217 (88%), Gaps = 3/217 (1%)
 Strand = Plus / Minus

                                                                        
Query: 246  ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 305
            ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 1082 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 1026

                                                                        
Query: 306  tctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcacgctcttca 365
            ||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1025 tctccttcagctggttttaggaactcgttgatgctcacagacttcttagcacgctcatca 966

                                                                        
Query: 366  cgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttgatgaaaacc 425
            ||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||| 
Sbjct: 965  cgttcagcattttctttcttcttcaaagcatccttgtcagatcccagtttgatgaaaact 906

                                                 
Query: 426  tcatcatttcctttcttggtggaaagtagttgcatag 462
            ||||||||| |||||||  |||||||| |||||||||
Sbjct: 905  tcatcattttctttcttattggaaagtggttgcatag 869
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>dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G19, full
           insert sequence
          Length = 1091

 Score =  236 bits (119), Expect = 5e-59
 Identities = 193/217 (88%), Gaps = 3/217 (1%)
 Strand = Plus / Minus

                                                                       
Query: 246 ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 305
           ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 773 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 717

                                                                       
Query: 306 tctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcacgctcttca 365
           ||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 716 tctccttcagctggttttaggaactcgttgatgctcacagacttcttagcacgctcatca 657

                                                                       
Query: 366 cgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttgatgaaaacc 425
           ||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||| 
Sbjct: 656 cgttcagcattttctttcttcttcaaagcatccttgtcagatcccagtttgatgaaaact 597

                                                
Query: 426 tcatcatttcctttcttggtggaaagtagttgcatag 462
           ||||||||| |||||||  |||||||| |||||||||
Sbjct: 596 tcatcattttctttcttattggaaagtggttgcatag 560
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>gb|BT016648.1| Zea mays clone Contig481 mRNA sequence
          Length = 1556

 Score =  155 bits (78), Expect = 2e-34
 Identities = 181/215 (84%), Gaps = 9/215 (4%)
 Strand = Plus / Minus

                                                                        
Query: 238  atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 297
            |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 1236 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 1180

                                                                        
Query: 298  agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 357
            || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 1179 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 1120

                                                                        
Query: 358  gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 417
            |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 1119 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 1066

                                               
Query: 418  tgaaaacctcatcatttcctttcttggtggaaagt 452
            ||||||| ||||||||| |||||||| | ||||||
Sbjct: 1065 tgaaaacttcatcattttctttcttgtttgaaagt 1031
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>gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence
          Length = 869

 Score =  155 bits (78), Expect = 2e-34
 Identities = 181/215 (84%), Gaps = 9/215 (4%)
 Strand = Plus / Minus

                                                                       
Query: 238 atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 297
           |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 572 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 516

                                                                       
Query: 298 agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 357
           || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 515 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 456

                                                                       
Query: 358 gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 417
           |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 455 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 402

                                              
Query: 418 tgaaaacctcatcatttcctttcttggtggaaagt 452
           ||||||| ||||||||| |||||||| | ||||||
Sbjct: 401 tgaaaacttcatcattttctttcttgtttgaaagt 367
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>gb|AY103606.1| Zea mays PCO150737 mRNA sequence
          Length = 1811

 Score =  155 bits (78), Expect = 2e-34
 Identities = 181/215 (84%), Gaps = 9/215 (4%)
 Strand = Plus / Minus

                                                                        
Query: 238  atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 297
            |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 1473 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 1417

                                                                        
Query: 298  agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 357
            || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 1416 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 1357

                                                                        
Query: 358  gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 417
            |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 1356 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 1303

                                               
Query: 418  tgaaaacctcatcatttcctttcttggtggaaagt 452
            ||||||| ||||||||| |||||||| | ||||||
Sbjct: 1302 tgaaaacttcatcattttctttcttgtttgaaagt 1268
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>ref|NM_191814.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score =  145 bits (73), Expect = 1e-31
 Identities = 156/184 (84%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 279  ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 338
            ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1013 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 954

                                                                        
Query: 339  ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 398
            |||||||||||||| |||||||| || || |||||||| || ||||||||       |||
Sbjct: 953  ctcacagacttcttggcacgctcatcgcgctcagcattttccttcttctt------atcc 900

                                                                        
Query: 399  ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 458
            || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 899  ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 840

                
Query: 459  atag 462
            ||||
Sbjct: 839  atag 836



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cttcccaccgagggttgggaactg 181
            ||||||||| ||||||||||||||
Sbjct: 1131 cttcccaccaagggttgggaactg 1108
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>dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B03, full
           insert sequence
          Length = 501

 Score =  145 bits (73), Expect = 1e-31
 Identities = 156/184 (84%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                       
Query: 279 ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 338
           ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 229 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 170

                                                                       
Query: 339 ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 398
           |||||||||||||| |||||||| || || |||||||| || ||||||||       |||
Sbjct: 169 ctcacagacttcttggcacgctcatcgcgctcagcattttccttcttctt------atcc 116

                                                                       
Query: 399 ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 458
           || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 115 ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 56

               
Query: 459 atag 462
           ||||
Sbjct: 55  atag 52



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 cttcccaccgagggttgggaactg 181
           ||||||||| ||||||||||||||
Sbjct: 347 cttcccaccaagggttgggaactg 324
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>gb|AF113521.1|AF113521 Zea mays putative transcription factor mRNA sequence
          Length = 1212

 Score =  141 bits (71), Expect = 2e-30
 Identities = 181/216 (83%), Gaps = 10/216 (4%)
 Strand = Plus / Minus

                                                                       
Query: 238 atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 297
           |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 943 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 887

                                                                       
Query: 298 agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 357
           || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 886 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 827

                                                                       
Query: 358 gctcttcacgttc-agcattctctttcttcttcaaagcctccttatcagcacccagtttg 416
           |||| ||||| || |||||| || ||||||||       ||||| |||| |||||| || 
Sbjct: 826 gctcatcacgctcaagcattttccttcttctt------atccttgtcagaacccagctta 773

                                               
Query: 417 atgaaaacctcatcatttcctttcttggtggaaagt 452
           |||||||| ||||||||| |||||||| | ||||||
Sbjct: 772 atgaaaacttcatcattttctttcttgtttgaaagt 737
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>dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044L15, full
            insert sequence
          Length = 1611

 Score =  137 bits (69), Expect = 4e-29
 Identities = 155/184 (84%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 279  ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 338
            ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1249 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 1190

                                                                        
Query: 339  ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 398
            |||||||||||||| |||||||| || || |||||||| ||  |||||||       |||
Sbjct: 1189 ctcacagacttcttggcacgctcatcgcgctcagcattttccctcttctt------atcc 1136

                                                                        
Query: 399  ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 458
            || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 1135 ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 1076

                
Query: 459  atag 462
            ||||
Sbjct: 1075 atag 1072



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cttcccaccgagggttgggaactg 181
            ||||||||| ||||||||||||||
Sbjct: 1367 cttcccaccaagggttgggaactg 1344
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 246    ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 305
              ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 111137 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 111081

                                                         
Query: 306    tctccttcagcaggcttcaggaactcgttgatgctcacagact 348
              ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 111080 tctccttcagctggttttaggaactcgttgatgctcacagact 111038



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 347    cttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctccttatcag 405
              ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 110709 cttcttagcacgctcatcacgttcagcattttctttcttcttcaaagcatccttgtcag 110651



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 409    ccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgcatag 462
              |||||||||||||||| ||||||||| |||||||  |||||||| |||||||||
Sbjct: 110563 ccagtttgatgaaaacttcatcattttctttcttattggaaagtggttgcatag 110510
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                            
Query: 246      ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 305
                ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 26260089 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 26260033

                                                           
Query: 306      tctccttcagcaggcttcaggaactcgttgatgctcacagact 348
                ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 26260032 tctccttcagctggttttaggaactcgttgatgctcacagact 26259990



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 347      cttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctccttatcag 405
                ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 26259661 cttcttagcacgctcatcacgttcagcattttctttcttcttcaaagcatccttgtcag 26259603



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 409      ccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgcatag 462
                |||||||||||||||| ||||||||| |||||||  |||||||| |||||||||
Sbjct: 26259515 ccagtttgatgaaaacttcatcattttctttcttattggaaagtggttgcatag 26259462



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 301      acctttctccttcagcaggcttcaggaactcgttgatgctca 342
                |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 29138394 acctctctccttcagccggcttcaagaattcattgatgctca 29138353
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 279      ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 338
                ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 30089040 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 30089099

                          
Query: 339      ctcacagact 348
                ||||||||||
Sbjct: 30089100 ctcacagact 30089109



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 417      atgaaaacctcatcatttcctttcttggtggaaagtagttgcatag 462
                |||||||  |||||||||||||||||||| |||||| | |||||||
Sbjct: 30089570 atgaaaatttcatcatttcctttcttggtagaaagtggctgcatag 30089615



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 303      ctttctccttcagcaggcttcaggaactcgttgatgct 340
                ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 23737335 ctttcaccttcagccggcttcaggaattcattgatgct 23737372



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 158      cttcccaccgagggttgggaactg 181
                ||||||||| ||||||||||||||
Sbjct: 30088922 cttcccaccaagggttgggaactg 30088945
to top
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 279   ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 338
             ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 85030 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 85089

                       
Query: 339   ctcacagact 348
             ||||||||||
Sbjct: 85090 ctcacagact 85099



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 417   atgaaaacctcatcatttcctttcttggtggaaagtagttgcatag 462
             |||||||  |||||||||||||||||||| |||||| | |||||||
Sbjct: 85560 atgaaaatttcatcatttcctttcttggtagaaagtggctgcatag 85605



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   cttcccaccgagggttgggaactg 181
             ||||||||| ||||||||||||||
Sbjct: 84912 cttcccaccaagggttgggaactg 84935
to top
>gb|AY104818.1| Zea mays PCO063451 mRNA sequence
          Length = 1163

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 296 atagaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 355
           |||| ||||||| |||||||| ||||||| |||||||||||||||||  ||||||||  |
Sbjct: 665 atagtacctttcgccttcagctggcttcaagaactcgttgatgctcagggacttcttgcc 606

                                               
Query: 356 acgctcttcacgttcagcattctctttcttcttcaa 391
            || ||||| | ||||||| | |||||||| |||||
Sbjct: 605 ccgttcttctctttcagcactttctttctttttcaa 570
to top
>dbj|AB236828.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete
            cds, clone: C2403
          Length = 1546

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 309  ccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 355
            |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 1146 ccttcagctggcttcagaaactcattgatgctcacagacttcttagc 1100
to top
>dbj|AB236752.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete
            cds, clone: C1477
          Length = 1535

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 309  ccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 355
            |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 1125 ccttcagctggcttcagaaactcattgatgctcacagacttcttagc 1079
to top
>gb|AF110226.1| Nicotiana tabacum nuclear RNA binding protein (RggA) mRNA, partial
           cds
          Length = 1150

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 304 tttctccttcagcaggcttcaggaactcgttgatgct 340
           |||||||||| |||||||||||||||||||| |||||
Sbjct: 761 tttctccttctgcaggcttcaggaactcgtttatgct 725
to top
>gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA,
           partial cds
          Length = 890

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 309 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 352
           |||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 608 ccttcagcgggcttcagaaactcgttaatgctgacagacttctt 565
to top
>gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA,
           partial cds
          Length = 925

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 309 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 352
           |||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 576 ccttcagcgggcttcagaaactcgttaatgctgacagacttctt 533
to top
>ref|NM_117785.2| Arabidopsis thaliana RNA binding AT4G16830 mRNA, complete cds
          Length = 1536

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 318  ggcttcaggaactcgttgatgctcacagacttcttagc 355
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1090 ggcttcagaaactcattgatgctcacagccttcttagc 1053
to top
>gb|DQ207876.1| Solanum tuberosum clone 092B12 nuclear RNA binding protein-like mRNA,
            complete cds
          Length = 1480

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 303  ctttctccttcagcaggcttcaggaactcgttgatgct 340
            |||||||| |||||||||||||| |||||||| |||||
Sbjct: 1137 ctttctccctcagcaggcttcagaaactcgtttatgct 1100
to top
>gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog  (At4g16830/dl4440w)
           mRNA, complete cds
          Length = 1068

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 318 ggcttcaggaactcgttgatgctcacagacttcttagc 355
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 908 ggcttcagaaactcattgatgctcacagccttcttagc 871
to top
>gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-like protein
           (At4g16830) mRNA, complete cds
          Length = 1099

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 318 ggcttcaggaactcgttgatgctcacagacttcttagc 355
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 908 ggcttcagaaactcattgatgctcacagccttcttagc 871
to top
>gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen homolog (At4g16830)
            mRNA, complete cds
          Length = 1443

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 318  ggcttcaggaactcgttgatgctcacagacttcttagc 355
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1064 ggcttcagaaactcattgatgctcacagccttcttagc 1027
to top
>gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, complete cds
          Length = 1431

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 318  ggcttcaggaactcgttgatgctcacagacttcttagc 355
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1071 ggcttcagaaactcattgatgctcacagccttcttagc 1034
to top
>emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS68ZE03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1287

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 318 ggcttcaggaactcgttgatgctcacagacttcttagc 355
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 906 ggcttcagaaactcattgatgctcacagccttcttagc 869
to top
>dbj|AB236845.1| Trifolium pratense RNA for hypothetical protein, complete cds, clone:
            C461
          Length = 1552

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 306  tctccttcagcaggcttcaggaactcgttgatgctca 342
            |||||||||||||||||||| ||||| || |||||||
Sbjct: 1145 tctccttcagcaggcttcagaaactcattaatgctca 1109
to top
>emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene)
          Length = 1071

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 396 tccttatcagcacccagtttgatgaaaacctcatcat 432
           |||||||||| |||||| || ||||||||||||||||
Sbjct: 854 tccttatcagaacccagctttatgaaaacctcatcat 818



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 315 gcaggcttcaggaactcgttgatgctcacagacttctt 352
           |||||||| || || || ||||||||||||||||||||
Sbjct: 929 gcaggcttaagaaattcattgatgctcacagacttctt 892
to top
>ref|XM_476001.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 301  acctttctccttcagcaggcttcaggaactcgttgatgctcacagacttctt 352
            |||| ||||||||||| ||||||| ||| || ||||||||||  ||||||||
Sbjct: 1000 acctctctccttcagccggcttcaagaattcattgatgctcagggacttctt 949
to top
>ref|NM_192656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 303 ctttctccttcagcaggcttcaggaactcgttgatgctcacagacttc 350
           ||||| |||||||| ||||||||||| || |||||||| | |||||||
Sbjct: 911 ctttcaccttcagccggcttcaggaattcattgatgctaagagacttc 864
to top
>emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene)
          Length = 1300

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 309 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 352
           ||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 982 ccttcagcaggcttcagaaattcattaatgctgacagacttctt 939
to top
>dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L01, full
            insert sequence
          Length = 1699

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 301  acctttctccttcagcaggcttcaggaactcgttgatgctcacagacttctt 352
            |||| ||||||||||| ||||||| ||| || ||||||||||  ||||||||
Sbjct: 1224 acctctctccttcagccggcttcaagaattcattgatgctcagggacttctt 1173
to top
>dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N19, full
            insert sequence
          Length = 1556

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 303  ctttctccttcagcaggcttcaggaactcgttgatgctcacagacttc 350
            ||||| |||||||| ||||||||||| || |||||||| | |||||||
Sbjct: 1211 ctttcaccttcagccggcttcaggaattcattgatgctaagagacttc 1164
to top
>gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete sequence
          Length = 1474

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 321  ttcaggaactcgttgatgctcacagacttcttagc 355
            ||||| ||||| ||||||||||||| |||||||||
Sbjct: 1064 ttcagaaactcattgatgctcacagccttcttagc 1030
to top
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0022J22, complete sequence
          Length = 142854

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 301   acctttctccttcagcaggcttcaggaactcgttgatgctca 342
             |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 21853 acctctctccttcagccggcttcaagaattcattgatgctca 21812
to top
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
             complete sequence
          Length = 100800

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 301   acctttctccttcagcaggcttcaggaactcgttgatgctca 342
             |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 64618 acctctctccttcagccggcttcaagaattcattgatgctca 64577
to top
>ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H RNA helicase
           (Tb09.211.3510) partial mRNA
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 264 ccgcggcccctgccgccacggcctcg 289
           ||||| ||||||||||||||||||||
Sbjct: 260 ccgcgacccctgccgccacggcctcg 235
to top
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 303    ctttctccttcagcaggcttcaggaactcgttgatgct 340
              ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 115039 ctttcaccttcagccggcttcaggaattcattgatgct 115076
to top
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 303   ctttctccttcagcaggcttcaggaactcgttgatgct 340
             ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 17920 ctttcaccttcagccggcttcaggaattcattgatgct 17957
to top
>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence
          Length = 175729

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 375    ttctctttcttcttcaaagcctcctt 400
              ||||||||||||||||| ||||||||
Sbjct: 153024 ttctctttcttcttcaacgcctcctt 153049
to top
>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence
          Length = 184181

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 375   ttctctttcttcttcaaagcctcctt 400
             ||||||||||||||||| ||||||||
Sbjct: 15113 ttctctttcttcttcaacgcctcctt 15138
to top
>emb|AJ007041.1|HSA7041 Homo sapiens mRNA for trithorax homologue 2
          Length = 8469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 ccgcggcccctgccgccacggcctc 288
           |||||||||||||| ||||||||||
Sbjct: 887 ccgcggcccctgcctccacggcctc 863
to top
>emb|AL603650.10| Human DNA sequence from clone RP11-263F14 on chromosome 9 Contains the
             3'end of COL5A1 for collagen (type V) alpha 1,a pseudogene
             similar to part of a ficolin family protein and the FCN2
             gene for ficolin (collagen/fibrinogen domain containing
             lectin) 2 (hucolin), complete sequence
          Length = 131466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   ttgataaaggggtggtactcg 138
             |||||||||||||||||||||
Sbjct: 98201 ttgataaaggggtggtactcg 98181
to top
>gb|AF042797.2| Takifugu rubripes FRG1 (FRG1), N-acylsphingosine amidohydrolase (ASAH),
             PCM1 (PCM1), squamous cell carcinoma antigen recognised by
             cytotoxic T lymphocytes (SART1), oxysterol binding protein
             1 (OSBP1), and caspase 3 (CASP3) genes, complete cds
          Length = 42616

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   cgccacggcctcggccaccat 297
             |||||||||||||||||||||
Sbjct: 30130 cgccacggcctcggccaccat 30150
to top
>gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109 containing HRX2,
             genomic sequence
          Length = 46251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 264   ccgcggcccctgccgccacggcctc 288
             |||||||||||||| ||||||||||
Sbjct: 15745 ccgcggcccctgcctccacggcctc 15721
to top
>gb|AF292120.1|AF292120 Takifugu rubripes clone 16-k18 squamous-cell carcinoma
           T-cell-recognized antigen (SART1) mRNA, partial cds
          Length = 1583

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 cgccacggcctcggccaccat 297
           |||||||||||||||||||||
Sbjct: 900 cgccacggcctcggccaccat 920
to top
>gb|AF292119.1|AF292119 Takifugu rubripes clone 16-i12 squamous-cell carcinoma
           T-cell-recognized antigen (SART1) mRNA, partial cds
          Length = 1318

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 277 cgccacggcctcggccaccat 297
           |||||||||||||||||||||
Sbjct: 635 cgccacggcctcggccaccat 655
to top
>ref|NM_058707.3| Caenorhabditis elegans LiPid Depleted family member (lpd-6) (lpd-6)
            mRNA, complete cds
          Length = 1824

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 243  cctctgaagcctccacgatccccgc 267
            |||||||||||||||||||| ||||
Sbjct: 1430 cctctgaagcctccacgatctccgc 1406
to top
>ref|NM_014727.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 4 (MLL4),
           mRNA
          Length = 8469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 ccgcggcccctgccgccacggcctc 288
           |||||||||||||| ||||||||||
Sbjct: 887 ccgcggcccctgcctccacggcctc 863
to top
>gb|AF186605.1|AF186605 Homo sapiens MLL2 protein mRNA, partial cds
          Length = 8140

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 ccgcggcccctgccgccacggcctc 288
           |||||||||||||| ||||||||||
Sbjct: 559 ccgcggcccctgcctccacggcctc 535
to top
>gb|AF043700.1| Caenorhabditis elegans cosmid K09H9, complete sequence
          Length = 37881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 243   cctctgaagcctccacgatccccgc 267
             |||||||||||||||||||| ||||
Sbjct: 22913 cctctgaagcctccacgatctccgc 22937
to top
>gb|BC011812.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12, mRNA (cDNA
            clone IMAGE:3051349), partial cds
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cccgcggcccctgccgccac 282
            ||||||||||||||||||||
Sbjct: 1364 cccgcggcccctgccgccac 1345
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 257     acgatccccgcggcccctgccgccacggcctc 288
               |||||| ||||||||||||| ||||| |||||
Sbjct: 1967929 acgatctccgcggcccctgcggccactgcctc 1967960
to top
>ref|XM_519350.1| PREDICTED: Pan troglodytes similar to GRIP and coiled-coil
           domain-containing protein 1 (Golgi coiled coil protein
           1) (LOC463697), mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 148 ctttctccttcagcaggctt 129
to top
>ref|XM_527071.1| PREDICTED: Pan troglodytes similar to Homeobox protein CDX-1
           (Caudal-type homeobox protein 1) (LOC471693), mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 237 ccccgcggcccctgccgcca 256
to top
>ref|NM_028900.2| Mus musculus golgi coiled coil 1 (Gcc1), mRNA
          Length = 4051

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 556 ctttctccttcagcaggctt 537
to top
>gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluster, complete sequence
          Length = 183192

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cctccacgatccccgcggcc 271
             ||||||||||||||||||||
Sbjct: 24852 cctccacgatccccgcggcc 24833
to top
>gb|BC066807.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone MGC:76506
           IMAGE:30101518), complete cds
          Length = 4048

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 525 ctttctccttcagcaggctt 506
to top
>ref|XM_953913.1| Neurospora crassa OR74A hypothetical protein (NCU08978.1) partial
            mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  ccgccaccgaatccgcctct 247
            ||||||||||||||||||||
Sbjct: 1703 ccgccaccgaatccgcctct 1722
to top
>ref|XM_331369.1| Neurospora crassa OR74A hypothetical protein (NCU08978.1) partial
            mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  ccgccaccgaatccgcctct 247
            ||||||||||||||||||||
Sbjct: 1703 ccgccaccgaatccgcctct 1722
to top
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ctttctccttcagcaggctt 322
             ||||||||||||||||||||
Sbjct: 56571 ctttctccttcagcaggctt 56590
to top
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 421  aaacctcatcatttcctttcttgg 444
            |||||||||||||||||| |||||
Sbjct: 3296 aaacctcatcatttccttccttgg 3273
to top
>gb|AY710267.1| Banana virus X RNA-dependent RNA polymerase gene, partial cds; and
            triple gene block protein 1, triple gene block protein 2,
            triple gene block protein 3, and capsid protein genes,
            complete cds
          Length = 2917

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  catttcctttcttggtggaa 449
            ||||||||||||||||||||
Sbjct: 2183 catttcctttcttggtggaa 2164
to top
>gb|BC021462.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone IMAGE:5054618),
           complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 416 ctttctccttcagcaggctt 397
to top
>ref|XM_780125.1| PREDICTED: Strongylocentrotus purpuratus similar to translocation
           protein 1 (LOC580046), partial mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 tcagcattctctttcttctt 388
           ||||||||||||||||||||
Sbjct: 47  tcagcattctctttcttctt 28
to top
>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7
          Length = 201471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 318   ggcttcaggaactcgttgatgctcacag 345
             |||||||| ||||| |||||||||||||
Sbjct: 35010 ggcttcagaaactcattgatgctcacag 34983
to top
>emb|CR859994.1| Pongo pygmaeus mRNA; cDNA DKFZp459H158 (from clone DKFZp459H158)
          Length = 4144

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 561 ctttctccttcagcaggctt 542
to top
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    ccccgcggcccctgccgcca 281
              ||||||||||||||||||||
Sbjct: 114438 ccccgcggcccctgccgcca 114419
to top
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 318   ggcttcaggaactcgttgatgctcacag 345
             |||||||| ||||| |||||||||||||
Sbjct: 20839 ggcttcagaaactcattgatgctcacag 20812
to top
>gb|BC014100.2| Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA
           clone MGC:20706 IMAGE:2988591), complete cds
          Length = 4153

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 566 ctttctccttcagcaggctt 547
to top
>emb|AL833358.1|HSM804671 Homo sapiens mRNA; cDNA DKFZp667D0214 (from clone DKFZp667D0214)
          Length = 2447

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 cccgcggcccctgccgccac 282
           ||||||||||||||||||||
Sbjct: 64  cccgcggcccctgccgccac 45
to top
>dbj|AK123129.1| Homo sapiens cDNA FLJ41134 fis, clone BRACE2027970
          Length = 2619

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cccgcggcccctgccgccac 282
            ||||||||||||||||||||
Sbjct: 2068 cccgcggcccctgccgccac 2049
to top
>dbj|AK092878.1| Homo sapiens cDNA FLJ35559 fis, clone SPLEN2005009
          Length = 3587

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 22  ctttctccttcagcaggctt 3
to top
>gb|AF110227.1| Arabidopsis thaliana nuclear RNA binding protein (RGGA) gene,
            complete cds
          Length = 1688

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 318  ggcttcaggaactcgttgatgctcacag 345
            |||||||| ||||| |||||||||||||
Sbjct: 1528 ggcttcagaaactcattgatgctcacag 1501
to top
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence
          Length = 183101

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   acctcatcatttcctttctt 442
             ||||||||||||||||||||
Sbjct: 83656 acctcatcatttcctttctt 83637
to top
>gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, complete sequence
          Length = 173450

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    cccgcggcccctgccgccac 282
              ||||||||||||||||||||
Sbjct: 156653 cccgcggcccctgccgccac 156634
to top
>ref|NM_001002762.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12 (DNAJB12),
            transcript variant 1, mRNA
          Length = 4342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cccgcggcccctgccgccac 282
            ||||||||||||||||||||
Sbjct: 1957 cccgcggcccctgccgccac 1938
to top
>ref|NM_024523.5| Homo sapiens GRIP and coiled-coil domain containing 1 (GCC1), mRNA
          Length = 4152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 566 ctttctccttcagcaggctt 547
to top
>dbj|AK016531.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932417P04 product:golgi coiled coil 1,
           full insert sequence
          Length = 2860

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 505 ctttctccttcagcaggctt 486
to top
>dbj|AK032253.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430511O04 product:hypothetical
           GRIP domain containing protein, full insert sequence
          Length = 4051

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 556 ctttctccttcagcaggctt 537
to top
>gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosome 14, complete sequence
          Length = 193716

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aggcacatggatgaatggtc 26
              ||||||||||||||||||||
Sbjct: 108179 aggcacatggatgaatggtc 108198
to top
>gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, complete cds
          Length = 1699

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
to top
>gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complete sequence
          Length = 175345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   tctctttcttcttcaaagcc 395
             ||||||||||||||||||||
Sbjct: 66973 tctctttcttcttcaaagcc 66954
to top
>gb|AF525417.1| Homo sapiens Golgi coiled coil protein 1 mRNA, complete cds
          Length = 2522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 341 ctttctccttcagcaggctt 322
to top
>gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete sequence
          Length = 1399

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 315  gcaggcttcaggaactcgttgatgctca 342
            ||||| ||||| ||||||||||||||||
Sbjct: 1014 gcaggtttcagaaactcgttgatgctca 987
to top
>ref|XM_575413.1| PREDICTED: Rattus norvegicus similar to GRIP and coiled-coil
           domain-containing protein 1 (Golgi coiled coil protein
           1) (LOC500058), mRNA
          Length = 3652

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 154 ctttctccttcagcaggctt 135
to top
>gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (CDX1) mRNA, complete cds
          Length = 942

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
to top
>dbj|AK025942.1| Homo sapiens cDNA: FLJ22289 fis, clone HRC04173
          Length = 2116

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cccgcggcccctgccgccac 282
            ||||||||||||||||||||
Sbjct: 1444 cccgcggcccctgccgccac 1425
to top
>gb|AC000359.1|HSAC000359 Human cosmid g1572c264, complete sequence
          Length = 43394

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 559 ctttctccttcagcaggctt 578
to top
>gb|AC000357.1|HSAC000357 Human cosmid g1572c101, complete sequence
          Length = 45309

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ctttctccttcagcaggctt 322
             ||||||||||||||||||||
Sbjct: 30623 ctttctccttcagcaggctt 30642
to top
>emb|AJ324296.1|HSA324296 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-DB14C
          Length = 759

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 330 ctttctccttcagcaggctt 311
to top
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 421   aaacctcatcatttcctttcttgg 444
             |||||||||||||||||| |||||
Sbjct: 93474 aaacctcatcatttccttccttgg 93451
to top
>gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromosome 7, complete sequence
          Length = 201977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ctttctccttcagcaggctt 322
              ||||||||||||||||||||
Sbjct: 103466 ctttctccttcagcaggctt 103485
to top
>ref|NM_001804.1| Homo sapiens caudal type homeobox transcription factor 1 (CDX1),
           mRNA
          Length = 1699

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
to top
>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence
          Length = 87857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   ccccgcggcccctgccgcca 281
             ||||||||||||||||||||
Sbjct: 35513 ccccgcggcccctgccgcca 35532
to top
>gb|U15212.1|HSU15212 Human caudal-type homeobox protein (CDX1) mRNA, partial cds
          Length = 1262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 51  ccccgcggcccctgccgcca 70
to top
>gb|AF086129.1|HUMZA83B04 Homo sapiens full length insert cDNA clone ZA83B04
          Length = 488

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 167 ctttctccttcagcaggctt 186
to top
>emb|AL591977.1| Listeria monocytogenes strain EGD, complete genome, segment 5/12
          Length = 270050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     cgcagaaatatatggtaatg 86
              ||||||||||||||||||||
Sbjct: 162831 cgcagaaatatatggtaatg 162850
to top
>emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, complete sequence
          Length = 58683

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    cagaaatatatggtaatggc 88
             ||||||||||||||||||||
Sbjct: 22680 cagaaatatatggtaatggc 22699
to top
>gb|BC078665.1| Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA
           clone MGC:88535 IMAGE:5923117), complete cds
          Length = 4108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 ctttctccttcagcaggctt 322
           ||||||||||||||||||||
Sbjct: 518 ctttctccttcagcaggctt 499
to top
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      cgcagaaatatatggtaatg 86
               ||||||||||||||||||||
Sbjct: 1053454 cgcagaaatatatggtaatg 1053473
to top
>emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chromosome 11, complete
             sequence
          Length = 118812

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cctccacgatccccgcggcc 271
             ||||||||||||||||||||
Sbjct: 45469 cctccacgatccccgcggcc 45450
to top
>gb|U16360.1|HSU16360 Human caudal-type homeobox protein (CDX1) gene, partial cds
          Length = 613

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ccccgcggcccctgccgcca 281
           ||||||||||||||||||||
Sbjct: 405 ccccgcggcccctgccgcca 424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,675,608
Number of Sequences: 3902068
Number of extensions: 4675608
Number of successful extensions: 99200
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98907
Number of HSP's gapped (non-prelim): 285
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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