Clone Name | rbasd17j11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... | 44 | 0.17 | 2 | gb|AE006667.1| Sulfolobus solfataricus P2 section 26 of 272 of t... | 42 | 0.69 | 3 | gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... | 40 | 2.7 |
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 gcacgcggcgtcgcgcgcggcc 132 |||||||||||||||||||||| Sbjct: 4287707 gcacgcggcgtcgcgcgcggcc 4287728
>gb|AE006667.1| Sulfolobus solfataricus P2 section 26 of 272 of the complete genome Length = 10379 Score = 42.1 bits (21), Expect = 0.69 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ttattctgcgtctatcaccat 78 ||||||||||||||||||||| Sbjct: 4951 ttattctgcgtctatcaccat 4931
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 2.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 114 cgcggcgtcgcgcgcggccncgg 136 ||||||||||||||||||| ||| Sbjct: 1459508 cgcggcgtcgcgcgcggcctcgg 1459530 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,675,072 Number of Sequences: 3902068 Number of extensions: 1675072 Number of successful extensions: 154851 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154650 Number of HSP's gapped (non-prelim): 201 length of query: 215 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 193 effective length of database: 17,147,199,772 effective search space: 3309409555996 effective search space used: 3309409555996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)