Clone Name | rbasd17j02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATG13_YEAST (Q06628) Autophagy-related protein 13 | 28 | 1.1 | 2 | APBE_TREPA (O83774) Thiamine biosynthesis lipoprotein apbE precu... | 30 | 2.4 | 3 | THBI_RHOPR (Q06684) Thrombin inhibitor rhodniin | 29 | 4.0 | 4 | AGOG_PYRKO (Q5JI79) N-glycosylase/DNA lyase (AGOG) (8-oxoguanine... | 28 | 6.9 | 5 | ANDR_CROCR (Q8MIK0) Androgen receptor (Dihydrotestosterone recep... | 28 | 9.0 |
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>ATG13_YEAST (Q06628) Autophagy-related protein 13| Length = 738 Score = 28.1 bits (61), Expect(2) = 1.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -2 Query: 304 SNSAFLNEPPQEERPGKAHTYTPQFHV 224 SNS+F N+PP RP + Y PQ ++ Sbjct: 390 SNSSFFNQPP-VHRPSMSSNYGPQMNI 415 Score = 21.6 bits (44), Expect(2) = 1.1 Identities = 8/24 (33%), Positives = 13/24 (54%) Frame = -1 Query: 425 PFGSPGRPIEKSPLGSSPKSRSPA 354 P P +P + +GS SR+P+ Sbjct: 367 PISRPVQPFKVGSIGSQSASRNPS 390
>APBE_TREPA (O83774) Thiamine biosynthesis lipoprotein apbE precursor| Length = 362 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +3 Query: 228 WNCGV*VCALPGLSSCGGSLRKAE 299 W GV VC L G+ SCGG R E Sbjct: 8 WRIGVLVCILCGVGSCGGRARVRE 31
>THBI_RHOPR (Q06684) Thrombin inhibitor rhodniin| Length = 103 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 153 PYCLHRVDVSCESFARKYTPPCNLNC 76 P+ LHRV C S Y+ PC LNC Sbjct: 9 PHALHRV---CGSDGETYSNPCTLNC 31
>AGOG_PYRKO (Q5JI79) N-glycosylase/DNA lyase (AGOG) (8-oxoguanine DNA| glycosylase) (EC 3.2.2.-) (DNA-(apurinic or apyrimidinic site) lyase) (EC 4.2.99.18) (AP lyase) Length = 263 Score = 28.5 bits (62), Expect = 6.9 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 334 AGKGRDWWTRSNSAFLNEPPQE 269 +GKG DWW + F PP++ Sbjct: 75 SGKGEDWWWEFSKYFSQNPPEK 96
>ANDR_CROCR (Q8MIK0) Androgen receptor (Dihydrotestosterone receptor)| Length = 912 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -3 Query: 147 CLHRVDVSCESFARKYTPPCNLNCC 73 C R D + + F RK PPC L C Sbjct: 588 CASRNDCTIDKFRRKNCPPCRLRKC 612 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,031,320 Number of Sequences: 219361 Number of extensions: 1007341 Number of successful extensions: 2755 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2650 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2754 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)