Clone Name | rbasd17i24 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 692 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 633 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 632 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 573 Query: 509 ggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctggt 564 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 572 gggatgtgcctgatgcgcttctctgtcatcagctgcattgcttgcaggactctggt 517 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 803 cggcctatttcgtcatcatc 784
>dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 14FPB077 Length = 1057 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 643 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 584 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 583 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 524 Query: 509 ggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctggt 564 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 523 gggatgtgcctgatgcgcttctctgtcatcagctgcattgcttgcaggactctggt 468 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 754 cggcctatttcgtcatcatc 735
>dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152K18, full insert sequence Length = 3163 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2751 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 2692 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 2691 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 2632 Query: 509 ggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctggt 564 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2631 gggatgtgcctgatgcgcttctctgtcatcagctgcattgcttgcaggactctggt 2576 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 2862 cggcctatttcgtcatcatc 2843
>dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F01, full insert sequence Length = 1067 Score = 151 bits (76), Expect = 3e-33 Identities = 151/176 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 763 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 704 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 703 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 644 Query: 509 ggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctggt 564 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 643 gggatgtgcctgatgcgcttctctgtcatcagctgcattgcttgcaggactctggt 588 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 874 cggcctatttcgtcatcatc 855
>gb|AY104325.1| Zea mays PCO141653 mRNA sequence Length = 1167 Score = 117 bits (59), Expect = 4e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 805 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 746 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 ||||||||||||||||| || || |||||||| |||| |||| | |||| ||||||| Sbjct: 745 accgcgcgcacgacgtcgccgatggagaccatccccagcatccccgtgccgtcgatcacc 686 Query: 509 ggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctggtgtc 567 || ||||| |||| || || |||||||| ||||||||||| |||||||| ||||||| Sbjct: 685 gggatgtgtctgacgcggttttctgtcatgagctgcattgcctgcaggaccttggtgtc 627 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 911 aaacacggcctatttcgtcatcatca 886
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 113 bits (57), Expect = 6e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 68224 tagtagcctccctggatgtagtcgttgagccggttcagctcctccctgtgctcggcgacc 68165 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 ||||||||||||||||| || || |||||||| |||| |||| || |||| |||||| Sbjct: 68164 accgcgcgcacgacgtcgccgatggagaccatccccagcatccctgtgccgtcaatcacc 68105 Query: 509 ggaatgtgcctgatacgcttgtctg 533 || ||||| ||||| || ||||||| Sbjct: 68104 gggatgtgtctgatgcggttgtctg 68080 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 531 ctgtcatcagctgcattgcttgcaggactctggtgt 566 ||||||||||||||||||||||||||||| |||||| Sbjct: 67998 ctgtcatcagctgcattgcttgcaggactttggtgt 67963
>gb|AY591185.1| Zea mays cultivar p38 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591184.1| Zea mays cultivar n46 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 486 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591183.1| Zea mays cultivar Mo17 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591181.1| Zea mays cultivar k76 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591179.1| Zea mays cultivar k29 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591178.1| Zea mays cultivar j40 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591172.1| Zea mays cultivar g80 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591170.1| Zea mays cultivar g42 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 120754 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 120695 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 |||||||||||||||||||| || |||||||| |||| |||| Sbjct: 120694 accgcgcgcacgacgtcaccgatggagaccatccccagcatc 120653 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 120860 aaacacggcctatttcgtcatcatca 120835 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 531 ctgtcatcagctgcattgcttgcaggactctggtgtc 567 ||||||| ||||||||||| |||||||| ||||||| Sbjct: 120508 ctgtcatgagctgcattgcctgcaggaccttggtgtc 120472
>gb|AY591187.1| Zea mays cultivar r67 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591186.1| Zea mays cultivar r03 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591182.1| Zea mays cultivar mko alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 480 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 165 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 106 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 105 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 64 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 271 aaacacggcctatttcgtcatcatca 246
>gb|AY591180.1| Zea mays cultivar k56 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591177.1| Zea mays cultivar ivana alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66
>gb|AY591176.1| Zea mays cultivar hb9 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 485 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 164 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 105 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 104 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 63 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 272 aaacacggcctatttcgtcat 252
>gb|AY591175.1| Zea mays cultivar H99 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 481 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66
>gb|AY591174.1| Zea mays cultivar H60 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 488 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 275 aaacacggcctatttcgtcat 255
>gb|AY591173.1| Zea mays cultivar g84 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 166 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 107 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 106 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 65 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 274 aaacacggcctatttcgtcat 254
>gb|AY591171.1| Zea mays cultivar g48 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 486 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 275 aaacacggcctatttcgtcat 255
>gb|AY591169.1| Zea mays cultivar g39 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 488 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 275 aaacacggcctatttcgtcat 255
>gb|AY591167.1| Zea mays cultivar co109 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 488 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 165 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 106 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 105 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 64 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591166.1| Zea mays cultivar b84 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591165.1| Zea mays cultivar 814 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 474 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66
>gb|AY591164.1| Zea mays cultivar 805 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AY591163.1| Zea mays cultivar 647 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 481 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatcac 316 ||||||||||||||||||||||||||| Sbjct: 267 aaacacggcctatttcgtcatcatcac 241
>gb|AY591162.1| Zea mays cultivar 595 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 488 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 275 aaacacggcctatttcgtcat 255
>gb|AY591160.1| Zea mays cultivar 42b alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 488 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcat 310 ||||||||||||||||||||| Sbjct: 275 aaacacggcctatttcgtcat 255
>gb|AY591159.1| Zea mays cultivar 207 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 273 aaacacggcctatttcgtcatcatca 248
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 137680 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 137621 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||||||||| || || |||||||| |||| |||| Sbjct: 137620 accgcgcgcacgacgtcgccgatggagaccatccccagcatc 137579 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 137786 aaacacggcctatttcgtcatcatca 137761 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 531 ctgtcatcagctgcattgcttgcaggactctggtgtc 567 ||||||| ||||||||||| |||||||| ||||||| Sbjct: 137437 ctgtcatgagctgcattgcctgcaggaccttggtgtc 137401
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 9e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 29914525 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 29914584 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 29914585 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 29914644 Query: 509 ggaatgtgcctgatacgcttgtctg 533 || ||||||||||| ||||| |||| Sbjct: 29914645 gggatgtgcctgatgcgcttctctg 29914669 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 531 ctgtcatcagctgcattgcttgcaggactctggt 564 |||||||||||||||||||||||||||||||||| Sbjct: 29914761 ctgtcatcagctgcattgcttgcaggactctggt 29914794 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 29914414 cggcctatttcgtcatcatc 29914433
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 89.7 bits (45), Expect = 9e-15 Identities = 120/145 (82%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 96081 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 96022 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 96021 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 95962 Query: 509 ggaatgtgcctgatacgcttgtctg 533 || ||||||||||| ||||| |||| Sbjct: 95961 gggatgtgcctgatgcgcttctctg 95937 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 531 ctgtcatcagctgcattgcttgcaggactctggt 564 |||||||||||||||||||||||||||||||||| Sbjct: 95845 ctgtcatcagctgcattgcttgcaggactctggt 95812 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 96192 cggcctatttcgtcatcatc 96173
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 89.7 bits (45), Expect = 9e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 80466 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 80525 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 80526 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 80585 Query: 509 ggaatgtgcctgatacgcttgtctg 533 || ||||||||||| ||||| |||| Sbjct: 80586 gggatgtgcctgatgcgcttctctg 80610 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 531 ctgtcatcagctgcattgcttgcaggactctggt 564 |||||||||||||||||||||||||||||||||| Sbjct: 80702 ctgtcatcagctgcattgcttgcaggactctggt 80735 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 80355 cggcctatttcgtcatcatc 80374
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 9e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 30005947 tagtagccaccctggatgtaggcgttgagccggttcagctcttcccggtgctcgctgacc 30006006 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatctgtgcgccgctgatcacc 508 || ||||| || | ||| ||||| |||||||| || | ||| | |||| ||||||| Sbjct: 30006007 acggcgcggacaatgtctccaatggagaccatcccaaccatgcccgtgccgtcgatcacc 30006066 Query: 509 ggaatgtgcctgatacgcttgtctg 533 || ||||||||||| ||||| |||| Sbjct: 30006067 gggatgtgcctgatgcgcttctctg 30006091 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 531 ctgtcatcagctgcattgcttgcaggactctggt 564 |||||||||||||||||||||||||||||||||| Sbjct: 30006183 ctgtcatcagctgcattgcttgcaggactctggt 30006216 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggcctatttcgtcatcatc 314 |||||||||||||||||||| Sbjct: 30005836 cggcctatttcgtcatcatc 30005855
>gb|AY591168.1| Zea mays cultivar d71_4ht alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 481 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||| ||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcactacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 268 aaacacggcctatttcgtcatcatca 243
>gb|AY591161.1| Zea mays cultivar 539 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 480 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 389 tagtacccgccctggatgaaggcgttgagccggttcagctcctccttgtgctcgctgacc 448 ||||| || ||||||||| || | ||||||||||||||||||||| |||||||| ||| Sbjct: 167 tagtagcctccctggatgtagtcattgagccggttcagctcctccctgtgctcggccacc 108 Query: 449 accgcgcgcacgacgtcaccaatcgagaccattcccatcatc 490 ||||||||||| ||||| || || |||||||| |||| |||| Sbjct: 107 accgcgcgcactacgtcgccgatggagaccatccccagcatc 66 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 290 aaacacggcctatttcgtcatcatca 315 |||||||||||||||||||||||||| Sbjct: 268 aaacacggcctatttcgtcatcatca 243
>ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 mRNA, complete cds Length = 1025 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 630 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 585
>gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds Length = 818 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 503 atcaccggaatgtgcctgatacgcttgtctgtcatcagctgcattgcttgcaggactctg 562 |||||||| ||||| ||||| | || ||||||||||| |||||||| || |||||| || Sbjct: 497 atcaccgggatgtgtctgattctgttatctgtcatcagttgcattgcctgaaggactttg 438 Query: 563 gt 564 || Sbjct: 437 gt 436
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcacgcggcgtcgcgcgcggcc 213 |||||||||||||||||||||| Sbjct: 4287707 gcacgcggcgtcgcgcgcggcc 4287728
>gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 975 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 630 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 585
>gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 621 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 508 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 463
>emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 584 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 539
>emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 571 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 526
>emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 581 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 536
>emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 605 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 560
>emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 501 tgatcaccggaatgtgcctgatacgcttgtctgtcatcagctgcat 546 |||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 613 tgattaccggaatatgcctgattcggttatctgtcatcagttgcat 568
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 accgcgcgcacgacgtcaccaatcg 473 |||||||||||||||||||| |||| Sbjct: 1570730 accgcgcgcacgacgtcacccatcg 1570706
>gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome 14, complete sequence Length = 226399 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 88001 gcatacatatcaaaagcttaa 87981
>gb|AC161873.5| Mus musculus BAC clone RP24-100P9 from chromosome 14, complete sequence Length = 240703 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 170883 gcatacatatcaaaagcttaa 170863
>ref|XM_359705.1| Magnaporthe grisea 70-15 hypothetical protein (MG05072.4) partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 391 gtacccgccctggatgaaggcgttg 415 |||||||||| |||||||||||||| Sbjct: 186 gtacccgcccaggatgaaggcgttg 162
>gb|AE006667.1| Sulfolobus solfataricus P2 section 26 of 272 of the complete genome Length = 10379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ttattctgcgtctatcaccat 159 ||||||||||||||||||||| Sbjct: 4951 ttattctgcgtctatcaccat 4931
>gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosome 14, complete sequence Length = 167869 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tacatacctacgcatacatat 30 ||||||||||||||||||||| Sbjct: 75994 tacatacctacgcatacatat 75974
>gb|AC164155.2| Mus musculus BAC clone RP24-548I6 from chromosome 14, complete sequence Length = 215419 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 156253 gcatacatatcaaaagcttaa 156233
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence Length = 194924 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 63049 gcatacatatcaaaagcttaa 63029
>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence Length = 180531 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 cgcggcgggggcctgggaacc 386 ||||||||||||||||||||| Sbjct: 23590 cgcggcgggggcctgggaacc 23610
>gb|AE008685.1|AE008685 Mus musculus T-cell receptor alpha/delta locus section 3 of 4 of the complete region Length = 400099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 95049 gcatacatatcaaaagcttaa 95069
>gb|AE008684.1|AE008684 Mus musculus T-cell receptor alpha/delta locus section 2 of 4 of the complete region Length = 400099 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 71881 gcatacatatcaaaagcttaa 71901
>gb|AC005240.1|AC005240 Mus musculus clone UWGC:magap from 14D1-D2 (T-cell Receptor Alpha Locus), complete sequence Length = 41830 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 31369 gcatacatatcaaaagcttaa 31389
>gb|AC004101.1|AC004101 Mouse Cosmid ma53a016 from 14D1-D2, complete sequence Length = 39491 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcatacatatcaaaagcttaa 41 ||||||||||||||||||||| Sbjct: 17944 gcatacatatcaaaagcttaa 17964
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 aaatatacactaaataagcg 237 |||||||||||||||||||| Sbjct: 229424 aaatatacactaaataagcg 229443
>gb|AC159437.1| Trypanosoma brucei chromosome 7 clone RPCI93-29K4, complete sequence Length = 159858 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aaatatacactaaataagcg 237 |||||||||||||||||||| Sbjct: 44521 aaatatacactaaataagcg 44502
>gb|AC163653.5| Mus musculus BAC clone RP24-334B8 from chromosome 14, complete sequence Length = 201678 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 catacatatcaaaagcttaa 41 |||||||||||||||||||| Sbjct: 192654 catacatatcaaaagcttaa 192673
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cgcggcgtcgcgcgcggcca 214 |||||||||||||||||||| Sbjct: 2034790 cgcggcgtcgcgcgcggcca 2034809
>ref|XM_421892.1| PREDICTED: Gallus gallus putative protein-O-fucosyltransferase (FUT13), mRNA Length = 2047 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tgagccggttcagctcctcc 433 |||||||||||||||||||| Sbjct: 439 tgagccggttcagctcctcc 420
>gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome 14, complete sequence Length = 212100 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acatatcaaaagcttaaggtagag 48 ||||||||||||||||||| |||| Sbjct: 212036 acatatcaaaagcttaaggaagag 212059
>gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosome 14, complete sequence Length = 167771 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 acatatcaaaagcttaaggtagag 48 ||||||||||||||||||| |||| Sbjct: 133931 acatatcaaaagcttaaggaagag 133954
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gctgaccaccgcgcgcacga 461 |||||||||||||||||||| Sbjct: 23138 gctgaccaccgcgcgcacga 23119
>ref|XM_822899.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.1320) partial mRNA Length = 1983 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctgcaaacgcgacgcggcgg 373 |||||||||||||||||||| Sbjct: 1714 ctgcaaacgcgacgcggcgg 1695
>ref|XM_763590.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_725_33576_35108) partial mRNA Length = 1533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tatcaaaagcttaaggtaga 47 |||||||||||||||||||| Sbjct: 811 tatcaaaagcttaaggtaga 830
>gb|AC008676.6| Homo sapiens chromosome 5 clone CTB-47B11, complete sequence Length = 208065 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gttcagctcctccttgtgct 440 |||||||||||||||||||| Sbjct: 97027 gttcagctcctccttgtgct 97046
>gb|AY197575.1| Myxococcus xanthus isolate C781 hypothetical adventurous gliding motility protein T (agmT) gene, partial cds; adventurous gliding motility protein S (agmS) gene, complete cds; and hypothetical S-layer protein-like protein gene, partial cds Length = 2243 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tgtgctcgctgaccaccgcg 454 |||||||||||||||||||| Sbjct: 1863 tgtgctcgctgaccaccgcg 1844
>emb|BX957323.7| Zebrafish DNA sequence from clone CH211-285O8 in linkage group 19, complete sequence Length = 107162 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttgtagagttcactcaaagg 347 |||||||||||||||||||| Sbjct: 6182 ttgtagagttcactcaaagg 6163
>emb|AL928928.4| Zebrafish DNA sequence from clone CH211-127C19, complete sequence Length = 163161 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttgtagagttcactcaaagg 347 |||||||||||||||||||| Sbjct: 83370 ttgtagagttcactcaaagg 83389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,263,139 Number of Sequences: 3902068 Number of extensions: 4263139 Number of successful extensions: 83446 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82948 Number of HSP's gapped (non-prelim): 497 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)