ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd17i16 |
|---|---|
| Clone Library Name | barley_pub |
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 67.8 bits (164), Expect = 1e-11 Identities = 40/118 (33%), Positives = 60/118 (50%) Frame = -2 Query: 473 PVKHAVELISREVARINDGYFKSFIDFANSGAVEKERLVATADAADMVLSPNIEVDSWLR 294 P+ + + ++D Y +S ID S + + V + + L PN+ V+SW R Sbjct: 330 PLTDTAGKVQEALKGLDDDYLRSAIDHTES---KPDLPVPYMGSPEKTLYPNVLVNSWGR 386 Query: 293 IPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKNCCY 120 IP+ MDFG G P FF S + +G L+PS GDGS+ + LFS ++ FK Y Sbjct: 387 IPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHLSLFKKYFY 444
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 67.8 bits (164), Expect = 1e-11 Identities = 40/118 (33%), Positives = 60/118 (50%) Frame = -2 Query: 473 PVKHAVELISREVARINDGYFKSFIDFANSGAVEKERLVATADAADMVLSPNIEVDSWLR 294 P+ + + ++D Y +S ID S + + V + + L PN+ V+SW R Sbjct: 329 PLTDTAGKVQEALKGLDDDYLRSAIDHTES---KPDLPVPYMGSPEKTLYPNVLVNSWGR 385 Query: 293 IPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKNCCY 120 IP+ MDFG G P FF S + +G L+PS GDGS+ + LFS ++ FK Y Sbjct: 386 IPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHLSLFKKHFY 443
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 65.9 bits (159), Expect = 6e-11 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = -2 Query: 473 PVKHAVELISREVARINDGYFKSFIDFANSGAVEKERL-VATADAADMVLSPNIEVDSWL 297 P+ + + ++D Y +S ID S K L V + + L PN+ V+SW Sbjct: 329 PLTDTAGKVQEALKGLDDDYLRSAIDHTES----KPGLPVPYMGSPEKTLYPNVLVNSWG 384 Query: 296 RIPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKNCCY 120 RIP+ MDFG G P FF S + +G L+PS GDGS+ + LFS ++ FK Y Sbjct: 385 RIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHLSRFKKYFY 443
>TREA_SALTY (Q8ZP20) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 570 Score = 33.9 bits (76), Expect = 0.23 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = -2 Query: 422 DGYFKSFIDFANSGAVEKERLVATADAADMVLSPNIEVDSWLRIPFYDMDFGGGRPFFFM 243 D YF + + A SG +K ADMV + E+D+W IP G R ++ Sbjct: 167 DSYF-TMLGLAESGHWDK--------VADMVANFGYEIDAWGHIP------NGNRTYYLS 211 Query: 242 PSYLPVEGLLI-LLPSFLGDGSVDAYVPLFSRD 147 S P ++ LL GD ++ Y+P ++ Sbjct: 212 RSQPPFFAFMVELLAQHEGDDALKEYLPQLQKE 244
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 33.9 bits (76), Expect = 0.23 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -2 Query: 320 NIEVDSWLRIPFYDMDFGGGRPFFFM--PSYLPVEGLLILLPSFLGDGSVDAYVPLFSRD 147 N + SW R+ Y++DFG G+P + P+ P + + + G+G ++ + D Sbjct: 401 NFWISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEG-IEVWASFLEDD 459 Query: 146 MNTFK 132 M F+ Sbjct: 460 MAKFE 464
>TREA_SALTI (P59765) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 570 Score = 32.7 bits (73), Expect = 0.52 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = -2 Query: 422 DGYFKSFIDFANSGAVEKERLVATADAADMVLSPNIEVDSWLRIPFYDMDFGGGRPFFFM 243 D YF + + A SG +K ADMV + E+D+W IP G R ++ Sbjct: 167 DSYF-TMLGLAESGHWDK--------VADMVANFGYEIDAWGYIP------NGNRTYYLS 211 Query: 242 PSYLPVEGLLI-LLPSFLGDGSVDAYVPLFSRD 147 S P ++ LL GD ++ Y+P ++ Sbjct: 212 RSQPPFFAFMVELLVQHEGDDALKEYLPQLQKE 244
>SYL_BRAJA (Q89WQ1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 874 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = -2 Query: 446 SREVARINDGYFKS----FIDFANSGAVEKERLVATADAADMVLSPNIEV 309 SRE+A + Y+K F+DF +G E+E+ D DM + N +V Sbjct: 123 SREIATCDPSYYKHQQKMFLDFLRAGLAEREKRKVNWDPVDMTVLANEQV 172
>TIP_PLAYO (Q7RRM4) T-cell immunomodulatory protein homolog precursor| Length = 701 Score = 32.3 bits (72), Expect = 0.67 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Frame = -2 Query: 233 LPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKNCCYSLD*VPFARTCHVPMC--AW-- 66 LP + IL F DGS+D VP + ++ CC S D + F +C +W Sbjct: 311 LPANSMQILFADFNADGSIDMVVPTCVKS-SSCNYCCTSDDKIYFIPNIQTKICENSWTK 369 Query: 65 -----CRINVSHLPSSIFEVLIQLS 6 CR+ + S FE +LS Sbjct: 370 NEDNKCRLASNLCSESDFEFAKKLS 394
>TIP_PLAF7 (Q8I3H7) T-cell immunomodulatory protein homolog precursor| Length = 719 Score = 31.6 bits (70), Expect = 1.2 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -2 Query: 233 LPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKN-CCYSLD*VPFARTCHVPMC 72 LP L +L F GDGS+D VP + ++F N CC S D + F +C Sbjct: 329 LPPNSLQVLFGDFNGDGSIDLVVPTCVK--SSFCNYCCVSDDKIYFIPNIQKKIC 381
>HCFC2_RAT (Q5RKG2) Host cell factor 2 (HCF-2) (C2 factor)| Length = 723 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -3 Query: 277 WTSAAGGHSSSCPATCRWRVCSSCCRLSWATAAWT 173 W G ++ + P C WR SS L+ TA WT Sbjct: 263 WVPHKGENTENSPHDCEWRCTSSFSYLNLDTAEWT 297
>VID21_USTMA (Q4P209) Chromatin modification-related protein VID21| Length = 1654 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +3 Query: 171 GVHAAVAQERRQQDEQTLHRQVAGHEEEWPPAAEVHVVERDPQ 299 G + A+AQ+ +QQ +Q +Q A + + PPAA ++ Q Sbjct: 1276 GTNQAIAQQTQQQQQQPQSQQTAQMQVQQPPAAAAAAQQQQQQ 1318
>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated| protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 7/37 (18%) Frame = -3 Query: 253 SSSCPATCRWRVCSSCC-------RLSWATAAWTPTC 164 SS CP+ C C CC R+S T + PTC Sbjct: 149 SSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPTC 185
>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and| dental anomalies protein) Length = 1630 Score = 30.4 bits (67), Expect = 2.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 384 GVGEVDEGLEVAIVDPGHLPADELHGVLHRPGH 482 G + + LE+ I+ P HL LH VL++P H Sbjct: 1050 GTISLSKDLELPIIPPTHLDLSALHNVLNKPFH 1082
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -3 Query: 301 GCGSRSTTWTSAAGGHSSS---CPATCRWRVCSSCCRLSWATAAWTPTC 164 GCGS S GG SSS C + C VC CC+ +W P C Sbjct: 30 GCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVC--CCK---PVCSWVPAC 73
>SYL_RHOPA (Q6ND22) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 876 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -2 Query: 446 SREVARINDGYFKS----FIDFANSGAVEKERLVATADAADMVLSPNIEV 309 +RE A + Y+K F+DF G VE+E+ D DM + N +V Sbjct: 123 AREFATCDPSYYKHQQKMFLDFLKVGLVEREKRKLNWDPVDMTVLANEQV 172
>CAP7_ARATH (Q9LVD8) Putative clathrin assembly protein At5g57200| Length = 591 Score = 30.0 bits (66), Expect = 3.3 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 4/85 (4%) Frame = +3 Query: 195 ERRQQDEQTLHRQVAGHEEEWPPAAEVHVVERDPQPAVHLDXXXXXXXXXXXXXXXPLLL 374 E Q+E T + Q EEE P E+ V E P P + D L L Sbjct: 341 EEENQNENTENDQPLIEEEEEEPKEEIEVEEAKPSPLIDTDDL--------------LGL 386 Query: 375 H----RAGVGEVDEGLEVAIVDPGH 437 H +A E + +AI PGH Sbjct: 387 HEINPKAAEIEQNNAFSLAIYPPGH 411
>VIT_BOMMO (Q27309) Vitellogenin precursor [Contains: Vitellin light chain| (VL); Vitellin light chain rare isoform; Vitellin heavy chain rare isoform; Vitellin heavy chain (VH)] Length = 1782 Score = 30.0 bits (66), Expect = 3.3 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Frame = -1 Query: 327 EPQHRGGQLAADPVLRHGLRRRAAI----LLHAQLPAGGGSAHPAAVFLGRRQRGRLRAT 160 + Q GGQ P + G + R + L H Q GSA A + + GRL+A Sbjct: 21 QSQSTGGQTYPSP-WQVGKQYRYEVTSRTLAHLQEGPSSGSAFKAQFTIRVKSPGRLQAK 79 Query: 159 L-*PRHEHLQELLLQPRLGPV-CTYLPCANV 73 L P+H + E L PR PV Y P N+ Sbjct: 80 LENPQHGNFNEQLPDPRELPVDLKYQPTPNI 110
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 29.6 bits (65), Expect = 4.4 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -3 Query: 331 C*APTSRWTAGCGSRSTTWTSAAGGHSSSCPATCRWR 221 C +PT+ W+ CG+ T T+A G S A R R Sbjct: 220 CSSPTTAWSGACGAGPTAATAAQPGKPRSAAAPGRAR 256
>AYT1_YEAST (Q12226) Trichothecene 3-O-acetyltransferase (EC 2.3.1.-)| Length = 474 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = -2 Query: 317 IEVDSWLRIPFYDMDF--GGGRP-FFFMPSYLPVEGLLILLP 201 I V SW ++ YD+DF G G+P P ++ +E L+ +P Sbjct: 398 IMVSSWAKVSLYDVDFNLGLGKPKSVRRPRFISLESLIYFMP 439
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -1 Query: 303 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 154 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 153 PRHEHLQE 130 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -1 Query: 303 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 154 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 153 PRHEHLQE 130 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -1 Query: 303 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 154 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 153 PRHEHLQE 130 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 4.4 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -1 Query: 303 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 154 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 153 PRHEHLQE 130 R EH++E Sbjct: 680 DRGEHVKE 687
>HCFC2_HUMAN (Q9Y5Z7) Host cell factor 2 (HCF-2) (C2 factor)| Length = 792 Score = 29.3 bits (64), Expect = 5.7 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -3 Query: 277 WTSAAGGHSSSCPATCRWRVCSSCCRLSWATAAWT 173 W G ++ + P C WR SS L+ T WT Sbjct: 263 WVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWT 297
>YBU5_YEAST (P38255) Protein YBR095C| Length = 453 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -2 Query: 275 DFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDMN 141 +FG PFF +P LL LLPS G S+ + +N Sbjct: 304 EFGEEDPFFALPRLEQSNALLSLLPSSSGSASISTLTAAEQQQLN 348
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 28.9 bits (63), Expect = 7.5 Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 10/66 (15%) Frame = -3 Query: 331 C*APTSRWTAGCGSRSTTW--TSAAGGHSSSC--PATCRWRVCSSCCR------LSWATA 182 C PT T C R+T W T+ S+SC PA C C CCR T Sbjct: 8 CCQPTCCRTTCC--RTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRPTSCQNTCCRTT 65 Query: 181 AWTPTC 164 PTC Sbjct: 66 CCQPTC 71
>NU4M_MARPO (P26848) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 495 Score = 28.5 bits (62), Expect = 9.7 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Frame = -2 Query: 383 GAVEKERLVATADAADMVLSPNIEVDSWLRIPFYDMDFGGGRPFFFMP-SYLPVEGLLIL 207 GA ++ LVAT A M+L + WL + + FG +P F + S L +LI Sbjct: 406 GAFQRNSLVATLAALGMILGAAYSL--WL---YNRVVFGNFKPNFILKFSDLNRREVLIF 460 Query: 206 LPSFLGDGSVDAYVPLFSRDMNT 138 LP +G + Y +F M+T Sbjct: 461 LPFIVGVIWMGVYPEVFLECMHT 483 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,594,746 Number of Sequences: 219361 Number of extensions: 1179572 Number of successful extensions: 4043 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4039 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
