ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17i12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193728.1| Oryza sativa (japonica cultivar-group), predic... 170 3e-39
2gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependen... 170 3e-39
3gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partia... 170 3e-39
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
7gb|AY109053.1| Zea mays PCO106983 mRNA sequence 76 1e-10
8emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chr... 44 0.47
9gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete se... 42 1.9
10emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chr... 42 1.9
11emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in... 42 1.9
12gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, co... 42 1.9
13gb|AC080093.6| Homo sapiens BAC clone RP11-957J11 from 7, comple... 42 1.9
14emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c... 42 1.9
15gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EG... 40 7.3
16gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 7.3
17gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete seq... 40 7.3
18gb|AY588246.1| Homo sapiens epidermal growth factor receptor (er... 40 7.3
19emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in ... 40 7.3
20gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, comp... 40 7.3
21gb|AC127251.4| Mus musculus BAC clone RP24-482M10 from chromosom... 40 7.3
22gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 7.3
23gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complet... 40 7.3
24ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carbo... 40 7.3
25gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 7.3
26gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, comple... 40 7.3
27gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete seq... 40 7.3
28gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, com... 40 7.3
29emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on ch... 40 7.3
30emb|AL096707.13|HSJ729N16 Human DNA sequence from clone RP4-729N... 40 7.3
31emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on ch... 40 7.3
32emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417 40 7.3
33emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, ... 40 7.3
34gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, com... 40 7.3
35gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, comp... 40 7.3
36dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein 40 7.3
37gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 40 7.3
38gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, compl... 40 7.3
39gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, com... 40 7.3
40ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoam... 40 7.3
41dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.3
42dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.3
43gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence 40 7.3
44emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, co... 40 7.3
45dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.3
46dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells ... 40 7.3
47gb|AC003111.1|AC003111 Human DNA from chromosome 19-specific cos... 40 7.3
48dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full... 40 7.3
49ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, ... 40 7.3
50dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.3
51gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, compl... 40 7.3
52gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7... 40 7.3
53gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete se... 40 7.3
54dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minu... 40 7.3
55gb|AC151746.3| Mus musculus BAC clone RP23-19M11 from 9, complet... 40 7.3
56emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in... 40 7.3
57emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in ... 40 7.3
58emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 40 7.3
59dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.3
60gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 m... 40 7.3
61emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, comple... 40 7.3
62emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on ch... 40 7.3
63emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chro... 40 7.3
64gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, co... 40 7.3
65dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.3
66dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.3 
>ref|NM_193728.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                       
Query: 361 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 919 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 860

                                                                       
Query: 421 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 859 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 800

                     
Query: 481 gcacagctcc 490
           ||||||||||
Sbjct: 799 gcacagctcc 790
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>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            (Pi-HIT-1) gene, complete cds
          Length = 2750

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                        
Query: 361  ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
            |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 2182 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 2123

                                                                        
Query: 421  ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
            | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 2122 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 2063

                      
Query: 481  gcacagctcc 490
            ||||||||||
Sbjct: 2062 gcacagctcc 2053
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>gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partial sequence
          Length = 613

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                       
Query: 361 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 369 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 310

                                                                       
Query: 421 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 309 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 250

                     
Query: 481 gcacagctcc 490
           ||||||||||
Sbjct: 249 gcacagctcc 240
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                            
Query: 361      ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
                |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 17747747 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 17747688

                                                                            
Query: 421      ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
                | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 17747687 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 17747628

                          
Query: 481      gcacagctcc 490
                ||||||||||
Sbjct: 17747627 gcacagctcc 17747618
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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                          
Query: 361    ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
              |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 129282 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 129223

                                                                          
Query: 421    ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
              | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 129222 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 129163

                        
Query: 481    gcacagctcc 490
              ||||||||||
Sbjct: 129162 gcacagctcc 129153
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>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full
           insert sequence
          Length = 1257

 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                       
Query: 361 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 420
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 987 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 928

                                                                       
Query: 421 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 480
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 927 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 868

                     
Query: 481 gcacagctcc 490
           ||||||||||
Sbjct: 867 gcacagctcc 858
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>gb|AY109053.1| Zea mays PCO106983 mRNA sequence
          Length = 704

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                       
Query: 339 gcctccttcagcattccatcagctccacttacgctgccattaccatttcgaatgagcttt 398
           |||||||| ||| |||||||| ||||| || | || || ||||||||  |||| || || 
Sbjct: 176 gcctccttgagctttccatcatctccagttgcacttccgttaccattgtgaattagtttc 235

                                                                       
Query: 399 tcctctgaaggtagatttttcattatttttctagttggtcctgaagcgttccacaagtac 458
           |||||||||||||||| |||||| || || || || || || ||||| ||||||||||||
Sbjct: 236 tcctctgaaggtagatgtttcatgatcttcctggtcggccccgaagccttccacaagtac 295

                         
Query: 459 cacatacgtgattt 472
           |||| ||| |||||
Sbjct: 296 cacacacgcgattt 309
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>emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chromosome 9 Contains the
             3' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB), complete sequence
          Length = 171629

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 416   tttcattatttttctagttggt 437
             ||||||||||||||||||||||
Sbjct: 49835 tttcattatttttctagttggt 49856
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>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   gaaaaataatattacaataca 174
             |||||||||||||||||||||
Sbjct: 19341 gaaaaataatattacaataca 19321
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>emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chromosome 1, complete
             sequence
          Length = 94737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 414   tttttcattatttttctagtt 434
             |||||||||||||||||||||
Sbjct: 33427 tttttcattatttttctagtt 33447
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>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
              complete sequence
          Length = 168402

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    gaatgagcttttcctctgaag 408
              |||||||||||||||||||||
Sbjct: 132435 gaatgagcttttcctctgaag 132415
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>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence
          Length = 174906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   tatacaggaaaaataatatta 167
             |||||||||||||||||||||
Sbjct: 81071 tatacaggaaaaataatatta 81051
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>gb|AC080093.6| Homo sapiens BAC clone RP11-957J11 from 7, complete sequence
          Length = 37522

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    tagacaaaaacaagtatacac 65
             |||||||||||||||||||||
Sbjct: 23589 tagacaaaaacaagtatacac 23609
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>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    gaatgagcttttcctctgaag 408
              |||||||||||||||||||||
Sbjct: 111781 gaatgagcttttcctctgaag 111761
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>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete
             cds, alternatively spliced; and 5S ribosomal RNA gene,
             complete sequence
          Length = 197496

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gtcttttcttttaaacagag 21
             ||||||||||||||||||||
Sbjct: 67939 gtcttttcttttaaacagag 67958
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>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    aggaaaaataatattacaat 171
              ||||||||||||||||||||
Sbjct: 176658 aggaaaaataatattacaat 176639
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>gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete sequence
          Length = 32218

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 385 ttcgaatgagcttttcctctgaag 408
           ||||| ||||||||||||||||||
Sbjct: 605 ttcgattgagcttttcctctgaag 628
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>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia
             viral (v-erb-b) oncogene homolog, avian) (EGFR) gene,
             complete cds
          Length = 192168

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gtcttttcttttaaacagag 21
             ||||||||||||||||||||
Sbjct: 60656 gtcttttcttttaaacagag 60675
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>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22,
             complete sequence
          Length = 122651

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   agatcaataaatcaaccgtataca 152
             ||||||||||||||||| ||||||
Sbjct: 64421 agatcaataaatcaaccatataca 64398
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>gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, complete sequence
          Length = 209787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   gcactgcaagatcaataaat 140
             ||||||||||||||||||||
Sbjct: 71760 gcactgcaagatcaataaat 71779
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>gb|AC127251.4| Mus musculus BAC clone RP24-482M10 from chromosome 9, complete
            sequence
          Length = 185420

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 14   aaacagagnctaatagattgtct 36
            |||||||| ||||||||||||||
Sbjct: 1742 aaacagagactaatagattgtct 1720
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>gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone IMAGE:6535602), complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complete sequence
          Length = 150101

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   aggaaaaataatattacaat 171
             ||||||||||||||||||||
Sbjct: 70766 aggaaaaataatattacaat 70785
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>ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carboxyl-terminal hydrolase
            (16.t00053) partial mRNA
          Length = 5580

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  gtagatttttcattattttt 428
            ||||||||||||||||||||
Sbjct: 1354 gtagatttttcattattttt 1335
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>gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone MGC:19042 IMAGE:4188988), complete cds
          Length = 4035

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 54  gtcctgaagccttccacaagtacc 31
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>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence
          Length = 136723

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gcactgcaagatcaataaat 140
             ||||||||||||||||||||
Sbjct: 53040 gcactgcaagatcaataaat 53021
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>gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete sequence
          Length = 39874

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   agatttttcattatttttct 430
             ||||||||||||||||||||
Sbjct: 36239 agatttttcattatttttct 36258
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>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence
          Length = 191821

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      gtcttttcttttaaacagag 21
              ||||||||||||||||||||
Sbjct: 128475 gtcttttcttttaaacagag 128456
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>emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on chromosome 1 Contains
            the 3' end of the gene for RNA processing factor 1
            (RPF1), the GNG5 gene for guanine nucleotide binding
            protein (G protein), gamma 5, the SPATA1 gene for
            spermatogenesis associated 1, the CTBS gene for
            chitobiase, di-N-acetyl- and a CpG island, complete
            sequence
          Length = 125565

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  atttttcattatttttctag 432
            ||||||||||||||||||||
Sbjct: 6107 atttttcattatttttctag 6126
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>emb|AL096707.13|HSJ729N16 Human DNA sequence from clone RP4-729N16 on chromosome 10, complete
             sequence
          Length = 154469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    gaagtagacaaaaacaagta 60
             ||||||||||||||||||||
Sbjct: 82478 gaagtagacaaaaacaagta 82459
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>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete
              sequence
          Length = 232408

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 436    gtcctgaagcgttccacaagtacc 459
              |||||||||| |||||||||||||
Sbjct: 104189 gtcctgaagccttccacaagtacc 104166
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>emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417
          Length = 40383

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   acatatctcaagttgatgag 338
             ||||||||||||||||||||
Sbjct: 15747 acatatctcaagttgatgag 15728
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>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence
          Length = 211004

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtagacaaaaacaagtat 61
             ||||||||||||||||||||
Sbjct: 82343 aagtagacaaaaacaagtat 82362
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>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    tttcattatttttctagttg 435
              ||||||||||||||||||||
Sbjct: 178905 tttcattatttttctagttg 178924
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>gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, complete sequence
          Length = 130735

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 405   gaaggtagatttttcattattttt 428
             ||||||||||||| ||||||||||
Sbjct: 41590 gaaggtagattttgcattattttt 41567
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>dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein
          Length = 4089

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 82  gtcctgaagccttccacaagtacc 59
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>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    atcctaaccccatggtgatg 304
              ||||||||||||||||||||
Sbjct: 140259 atcctaaccccatggtgatg 140278
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>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence
          Length = 219227

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  tttcctctgaaggtagattt 416
            ||||||||||||||||||||
Sbjct: 4734 tttcctctgaaggtagattt 4715
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>gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, complete sequence
          Length = 183772

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   tttcattatttttctagttg 435
             ||||||||||||||||||||
Sbjct: 87166 tttcattatttttctagttg 87185
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>ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoamide) (Ogdh), mRNA
          Length = 6638

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1007N08 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 6638

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530117I02 product:oxoglutarate
           dehydrogenase (lipoamide), full insert sequence
          Length = 4127

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 86  gtcctgaagccttccacaagtacc 63
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>gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence
          Length = 177839

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ggaaaaataatattacaata 172
             ||||||||||||||||||||
Sbjct: 16833 ggaaaaataatattacaata 16852
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>emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, complete sequence
          Length = 173227

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtagacaaaaacaagtat 61
             ||||||||||||||||||||
Sbjct: 41709 aagtagacaaaaacaagtat 41690
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>dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I920176A16 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 4155

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 112 gtcctgaagccttccacaagtacc 89
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>dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430020N12
           product:oxoglutarate dehydrogenase (lipoamide) (EC
           1.2.4.2) E1 component (fragment) homolog [Mus musculus],
           full insert sequence
          Length = 3554

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 48  gtcctgaagccttccacaagtacc 25
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>gb|AC003111.1|AC003111 Human DNA from chromosome 19-specific cosmid R28194, genomic sequence,
             complete sequence
          Length = 40649

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    caagtatacacctagaacac 74
             ||||||||||||||||||||
Sbjct: 21033 caagtatacacctagaacac 21014
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>dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched
           library, clone:2210403E04 product:unclassifiable, full
           insert sequence
          Length = 779

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, complete cds
          Length = 1628

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 385  ttcgaatgagcttttcctctgaag 408
            ||||| ||||||||||||||||||
Sbjct: 1463 ttcgattgagcttttcctctgaag 1440
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>dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 1/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   atcctaaccccatggtgatg 304
             ||||||||||||||||||||
Sbjct: 84357 atcctaaccccatggtgatg 84376
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>gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, complete sequence
          Length = 154123

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   tttcctctgaaggtagattt 416
             ||||||||||||||||||||
Sbjct: 79348 tttcctctgaaggtagattt 79329
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>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gtcttttcttttaaacagag 21
             ||||||||||||||||||||
Sbjct: 67939 gtcttttcttttaaacagag 67958
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>gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete sequence
          Length = 86223

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   tttttcattatttttctagt 433
             ||||||||||||||||||||
Sbjct: 79753 tttttcattatttttctagt 79734
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>dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000064907, based on BLAT search
          Length = 172

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 436 gtcctgaagcgttccacaagtacc 459
           |||||||||| |||||||||||||
Sbjct: 70  gtcctgaagccttccacaagtacc 47
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>gb|AC151746.3| Mus musculus BAC clone RP23-19M11 from 9, complete sequence
          Length = 168291

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     aaacagagnctaatagattgtct 36
              |||||||| ||||||||||||||
Sbjct: 128397 aaacagagactaatagattgtct 128419
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>emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in linkage group 22,
             complete sequence
          Length = 106459

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtagacaaaaacaagtat 61
             ||||||||||||||||||||
Sbjct: 65748 aagtagacaaaaacaagtat 65767
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>emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in linkage group 22,
             complete sequence
          Length = 234949

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   agatcaataaatcaaccgtataca 152
             ||||||||||||||||| ||||||
Sbjct: 65712 agatcaataaatcaaccatataca 65735
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 411   agatttttcattatttttctagtt 434
             ||||||| ||||||||||||||||
Sbjct: 96509 agattttacattatttttctagtt 96532
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    atcctaaccccatggtgatg 304
              ||||||||||||||||||||
Sbjct: 231363 atcctaaccccatggtgatg 231382
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>gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 map 4q25, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    atacaggaaaaataatattacaat 171
              |||||| |||||||||||||||||
Sbjct: 135824 atacagtaaaaataatattacaat 135847
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>emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, complete sequence
          Length = 39534

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   tttttcattatttttctagt 433
             ||||||||||||||||||||
Sbjct: 15270 tttttcattatttttctagt 15289
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>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
              sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    tttcattatttttctagttg 435
              ||||||||||||||||||||
Sbjct: 127922 tttcattatttttctagttg 127903
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>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete
             sequence
          Length = 230614

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   atacaggaaaaataatatta 167
             ||||||||||||||||||||
Sbjct: 77737 atacaggaaaaataatatta 77718
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>gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, complete sequence
          Length = 185872

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  ggaaaaataatattacaata 172
            ||||||||||||||||||||
Sbjct: 6533 ggaaaaataatattacaata 6514
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>dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T650, complete sequence
          Length = 67008

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  atcctaaccccatggtgatg 304
            ||||||||||||||||||||
Sbjct: 7200 atcctaaccccatggtgatg 7219
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>dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 10/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   atcctaaccccatggtgatg 304
             ||||||||||||||||||||
Sbjct: 44351 atcctaaccccatggtgatg 44370


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,827,782
Number of Sequences: 3902068
Number of extensions: 5827782
Number of successful extensions: 119419
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119295
Number of HSP's gapped (non-prelim): 124
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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