Clone Name | rbasd17i03 |
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Clone Library Name | barley_pub |
>ref|XM_471066.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 347 bits (175), Expect = 3e-92 Identities = 292/331 (88%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| |||||||||||||||||| ||| ||||| |||| |||||| |||||||||| Sbjct: 1276 agacttgggccgtgccttgcgtgaacaagggatcctcacaccggtacttcccgtcagggc 1217 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagcagctggctccgtgggggga 394 | || ||||||||||||||||| | |||||||| ||||| ||||||||||| || |||| Sbjct: 1216 caattccaaagcccttgggatctgagaacacgttttccagaagctggctccggggaggga 1157 Query: 395 gcgggctcgcgtcggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttctcga 454 ||||||| ||||| ||||||||||| |||||||| || || || || ||||| ||||||| Sbjct: 1156 gcgggcttgcgtcagcgaactccacggcctcttcaacaacatcatcgatctttttctcga 1097 Query: 455 tgctcttcagctcggcttcagacgcgaggttctgctcgatgatgtacttcttcagggatg 514 ||||||||||||||| ||||| || |||||||| ||||||||||||||||||| || || Sbjct: 1096 tgctcttcagctcggattcagttgcaaggttctgttcgatgatgtacttcttcaaggctg 1037 Query: 515 tgatggggtcccttgcggcgtagtgagatttctcatcaggcctcctgagttcatctggat 574 | |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1036 taatggggtcccttgcggcgtaatgagatttctcatcaggtctcctgagctcatctggat 977 Query: 575 cagcaagagagtggcctctgaacctgtaagt 605 |||||||||| || |||||||||| |||||| Sbjct: 976 cagcaagagaatgccctctgaaccggtaagt 946
>dbj|AK069299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012M21, full insert sequence Length = 1736 Score = 347 bits (175), Expect = 3e-92 Identities = 292/331 (88%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| |||||||||||||||||| ||| ||||| |||| |||||| |||||||||| Sbjct: 1416 agacttgggccgtgccttgcgtgaacaagggatcctcacaccggtacttcccgtcagggc 1357 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagcagctggctccgtgggggga 394 | || ||||||||||||||||| | |||||||| ||||| ||||||||||| || |||| Sbjct: 1356 caattccaaagcccttgggatctgagaacacgttttccagaagctggctccggggaggga 1297 Query: 395 gcgggctcgcgtcggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttctcga 454 ||||||| ||||| ||||||||||| |||||||| || || || || ||||| ||||||| Sbjct: 1296 gcgggcttgcgtcagcgaactccacggcctcttcaacaacatcatcgatctttttctcga 1237 Query: 455 tgctcttcagctcggcttcagacgcgaggttctgctcgatgatgtacttcttcagggatg 514 ||||||||||||||| ||||| || |||||||| ||||||||||||||||||| || || Sbjct: 1236 tgctcttcagctcggattcagttgcaaggttctgttcgatgatgtacttcttcaaggctg 1177 Query: 515 tgatggggtcccttgcggcgtagtgagatttctcatcaggcctcctgagttcatctggat 574 | |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1176 taatggggtcccttgcggcgtaatgagatttctcatcaggtctcctgagctcatctggat 1117 Query: 575 cagcaagagagtggcctctgaacctgtaagt 605 |||||||||| || |||||||||| |||||| Sbjct: 1116 cagcaagagaatgccctctgaaccggtaagt 1086
>gb|AY103738.1| Zea mays PCO146589 mRNA sequence Length = 1787 Score = 295 bits (149), Expect = 9e-77 Identities = 290/337 (86%) Strand = Plus / Minus Query: 271 ccttagacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtca 330 ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| || || Sbjct: 1538 ccttaaacttgggcggtgccttgggtgaacttgggatcctcgcacctgtacttaccatcg 1479 Query: 331 gggccgatgccaaagcccttgggatcggcaaacacgttctccagcagctggctccgtggg 390 |||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1478 gggccgataccaaagcctttggggtcggcaaacacgttctccaacagctggctgcgcggc 1419 Query: 391 gggagcgggctcgcgtcggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttc 450 || ||||||||||||| || ||||| || ||||| || ||||| ||||| ||||||||| Sbjct: 1418 ggatgcgggctcgcgtcagcaaactcgacagcctcctcaacgacatcgtcgatcttcttc 1359 Query: 451 tcgatgctcttcagctcggcttcagacgcgaggttctgctcgatgatgtacttcttcagg 510 ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||| | Sbjct: 1358 tcgatgctcttcagctcggattcggttgcgaggttctgctctatgatgtacttcttcaag 1299 Query: 511 gatgtgatggggtcccttgcggcgtagtgagatttctcatcaggcctcctgagttcatct 570 | ||||| | ||||||||||||||||| | ||||||||||||| ||||||| |||||| Sbjct: 1298 gccgtgatagaatcccttgcggcgtagtgtgttttctcatcaggcttcctgagctcatct 1239 Query: 571 ggatcagcaagagagtggcctctgaacctgtaagttt 607 || || ||||| ||||| || | ||||||||| |||| Sbjct: 1238 gggtctgcaagggagtgaccccggaacctgtatgttt 1202
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 280 bits (141), Expect = 5e-72 Identities = 243/277 (87%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| |||||||||||||||||| ||| ||||| |||| |||||| |||||||||| Sbjct: 1126401 agacttgggccgtgccttgcgtgaacaagggatcctcacaccggtacttcccgtcagggc 1126342 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagcagctggctccgtgggggga 394 | || ||||||||||||||||| | |||||||| ||||| ||||||||||| || |||| Sbjct: 1126341 caattccaaagcccttgggatctgagaacacgttttccagaagctggctccggggaggga 1126282 Query: 395 gcgggctcgcgtcggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttctcga 454 ||||||| ||||| ||||||||||| |||||||| || || || || ||||| ||||||| Sbjct: 1126281 gcgggcttgcgtcagcgaactccacggcctcttcaacaacatcatcgatctttttctcga 1126222 Query: 455 tgctcttcagctcggcttcagacgcgaggttctgctcgatgatgtacttcttcagggatg 514 ||||||||||||||| ||||| || |||||||| ||||||||||||||||||| || || Sbjct: 1126221 tgctcttcagctcggattcagttgcaaggttctgttcgatgatgtacttcttcaaggctg 1126162 Query: 515 tgatggggtcccttgcggcgtagtgagatttctcatc 551 | |||||||||||||||||||| |||||||||||||| Sbjct: 1126161 taatggggtcccttgcggcgtaatgagatttctcatc 1126125 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 551 caggcctcctgagttcatctggatcagcaagagagtggcctctgaacctgtaagt 605 |||| |||||||| |||||||||||||||||||| || |||||||||| |||||| Sbjct: 1124997 caggtctcctgagctcatctggatcagcaagagaatgccctctgaaccggtaagt 1124943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 catttcttgggtaaaaaactg 95 ||||||||||||||||||||| Sbjct: 30276636 catttcttgggtaaaaaactg 30276656
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07, complete sequence Length = 167895 Score = 280 bits (141), Expect = 5e-72 Identities = 243/277 (87%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| |||||||||||||||||| ||| ||||| |||| |||||| |||||||||| Sbjct: 68783 agacttgggccgtgccttgcgtgaacaagggatcctcacaccggtacttcccgtcagggc 68724 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagcagctggctccgtgggggga 394 | || ||||||||||||||||| | |||||||| ||||| ||||||||||| || |||| Sbjct: 68723 caattccaaagcccttgggatctgagaacacgttttccagaagctggctccggggaggga 68664 Query: 395 gcgggctcgcgtcggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttctcga 454 ||||||| ||||| ||||||||||| |||||||| || || || || ||||| ||||||| Sbjct: 68663 gcgggcttgcgtcagcgaactccacggcctcttcaacaacatcatcgatctttttctcga 68604 Query: 455 tgctcttcagctcggcttcagacgcgaggttctgctcgatgatgtacttcttcagggatg 514 ||||||||||||||| ||||| || |||||||| ||||||||||||||||||| || || Sbjct: 68603 tgctcttcagctcggattcagttgcaaggttctgttcgatgatgtacttcttcaaggctg 68544 Query: 515 tgatggggtcccttgcggcgtagtgagatttctcatc 551 | |||||||||||||||||||| |||||||||||||| Sbjct: 68543 taatggggtcccttgcggcgtaatgagatttctcatc 68507 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 551 caggcctcctgagttcatctggatcagcaagagagtggcctctgaacctgtaagt 605 |||| |||||||| |||||||||||||||||||| || |||||||||| |||||| Sbjct: 67379 caggtctcctgagctcatctggatcagcaagagaatgccctctgaaccggtaagt 67325
>gb|BT018932.1| Zea mays clone Contig65.F mRNA sequence Length = 851 Score = 246 bits (124), Expect = 7e-62 Identities = 271/320 (84%) Strand = Plus / Minus Query: 288 gccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggccgatgccaaagcc 347 |||||| | ||||||||| ||||| ||||||||||| || || ||||| || |||||||| Sbjct: 599 gccttgggggaacttgggatcctcccacctgtacttaccatcggggccaataccaaagcc 540 Query: 348 cttgggatcggcaaacacgttctccagcagctggctccgtggggggagcgggctcgcgtc 407 ||||| ||||||||||||||||||| ||||||||| || ||||| || ||||||||||| Sbjct: 539 tttggggtcggcaaacacgttctccaacagctggctgcgcgggggaagggggctcgcgtc 480 Query: 408 ggcgaactccaccgcctcttcgacgacgtcgtcaatcttcttctcgatgctcttcagctc 467 | ||||| || ||||| || || || |||||||| ||||||||||||||||||||||| Sbjct: 479 aacaaactcgacagcctcctcaacaacatcgtcaattttcttctcgatgctcttcagctc 420 Query: 468 ggcttcagacgcgaggttctgctcgatgatgtacttcttcagggatgtgatggggtccct 527 || ||| | |||||||||||||| ||||||||||| |||| || ||||| | ||||| Sbjct: 419 ggattcggttgcgaggttctgctctatgatgtactttttcaaggccgtgatagaatccct 360 Query: 528 tgcggcgtagtgagatttctcatcaggcctcctgagttcatctggatcagcaagagagtg 587 |||||||||||| | ||||||||||||| ||||||| |||||||| || ||||| ||||| Sbjct: 359 tgcggcgtagtgtgttttctcatcaggcttcctgagctcatctgggtctgcaagggagtg 300 Query: 588 gcctctgaacctgtaagttt 607 || | ||||||||| |||| Sbjct: 299 accccggaacctgtatgttt 280
>gb|BT012988.1| Lycopersicon esculentum clone 114208R, mRNA sequence Length = 1692 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 286 gtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggccgatgccaaag 345 ||||||| ||||||||||| || || || |||||| | || ||||| || ||||||||| Sbjct: 1423 gtgccttcggtgaacttgggatcttcacatctgtaccttccatcaggcccaatgccaaag 1364 Query: 346 cccttgggatcggcaaacacgttctccagcagctggct 383 ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1363 ccctttggatcagcaaacacgttctcgagcagctggct 1326
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 562 agttcatctggatcagcaagagagtggcc 590 ||||||||||||||||||||||| ||||| Sbjct: 45964 agttcatctggatcagcaagagaatggcc 45992
>ref|NM_099991.2| Arabidopsis thaliana PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acc> AT1G01090 (PDH-E1 ALPHA) mRNA, complete cds Length = 1620 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1398 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1339 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1338 caattccaaatccttttggatcagcaaacacattctctagca 1297
>gb|U80185.1|ATU80185 Arabidopsis thaliana pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein, complete cds Length = 1541 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1402 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1343 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1342 caattccaaatccttttggatcagcaaacacattctctagca 1301
>gb|AY063724.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds Length = 1287 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1285 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1226 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1225 caattccaaatccttttggatcagcaaacacattctctagca 1184
>gb|AY052721.1| Arabidopsis thaliana At1g01090/T25K16_8 mRNA, complete cds Length = 1610 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1400 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1341 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1340 caattccaaatccttttggatcagcaaacacattctctagca 1299
>emb|BX815365.1|CNS0ACRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1441 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1368 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1309 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1308 caattccaaatccttttggatcagcaaacacattctctagca 1267
>emb|BX815342.1|CNS0ACRT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1557 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Minus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 1391 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 1332 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 1331 caattccaaatccttttggatcagcaaacacattctctagca 1290
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 44.1 bits (22), Expect = 0.53 Identities = 82/102 (80%) Strand = Plus / Plus Query: 275 agacttgcgccgtgccttgcgtgaacttggggtcctcgcacctgtacttgccgtcagggc 334 ||||||| || ||||||| || |||||||||||||| || |||||| || ||||| | Sbjct: 47409 agacttgagctgtgccttcggtaaacttggggtcctcacatctgtaccgtccatcaggtc 47468 Query: 335 cgatgccaaagcccttgggatcggcaaacacgttctccagca 376 | || ||||| || || ||||| |||||||| ||||| |||| Sbjct: 47469 caattccaaatccttttggatcagcaaacacattctctagca 47510
>dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-693N9, complete sequence Length = 172081 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 attacacagtgatatatgacct 156 |||||||||||||||||||||| Sbjct: 148689 attacacagtgatatatgacct 148710
>gb|AE009830.1|AE009830 Pyrobaculum aerophilum strain IM2 section 85 of 201 of the complete genome Length = 10618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 cgcctcttcgacgacgtcgtc 440 ||||||||||||||||||||| Sbjct: 3396 cgcctcttcgacgacgtcgtc 3376
>gb|AC019129.8| Homo sapiens BAC clone RP11-559M23 from 2, complete sequence Length = 172611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 agcaatgaattacacagtgat 147 ||||||||||||||||||||| Sbjct: 121429 agcaatgaattacacagtgat 121409
>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete sequence Length = 202134 Score = 42.1 bits (21), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 cagnatacatgtagagtttactgtagaa 55 ||| |||||||||||| ||||||||||| Sbjct: 22195 cagtatacatgtagagattactgtagaa 22222
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 catttcttgggtaaaaaactg 95 ||||||||||||||||||||| Sbjct: 172949 catttcttgggtaaaaaactg 172969
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 catttcttgggtaaaaaactg 95 ||||||||||||||||||||| Sbjct: 26532 catttcttgggtaaaaaactg 26552
>emb|CT009700.8| Mouse DNA sequence from clone RP23-114M15 on chromosome 13, complete sequence Length = 184143 Score = 42.1 bits (21), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 28 cagnatacatgtagagtttactgtagaa 55 ||| |||||||||||| ||||||||||| Sbjct: 174994 cagtatacatgtagagattactgtagaa 175021
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 ccaccgcctcttcgacgacgt 436 ||||||||||||||||||||| Sbjct: 93974 ccaccgcctcttcgacgacgt 93954
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 tcttcgacgacgtcgtcaat 443 |||||||||||||||||||| Sbjct: 1607177 tcttcgacgacgtcgtcaat 1607196
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence Length = 235363 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tgaactggagaacatttctt 82 |||||||||||||||||||| Sbjct: 123197 tgaactggagaacatttctt 123178
>ref|XM_796706.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3058-PA, transcript variant 2 (LOC578262), mRNA Length = 1589 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 cgatgatgtacttcttcagg 510 |||||||||||||||||||| Sbjct: 551 cgatgatgtacttcttcagg 570
>ref|XM_774836.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3058-PA, transcript variant 1 (LOC578262), mRNA Length = 1634 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 cgatgatgtacttcttcagg 510 |||||||||||||||||||| Sbjct: 596 cgatgatgtacttcttcagg 615
>ref|XM_792960.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3058-PA (LOC593488), mRNA Length = 845 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 cgatgatgtacttcttcagg 510 |||||||||||||||||||| Sbjct: 609 cgatgatgtacttcttcagg 628
>gb|AC150683.3| Mus musculus BAC clone RP23-435E16 from chromosome 7, complete sequence Length = 198646 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 tgagttcatctggatcagca 579 |||||||||||||||||||| Sbjct: 32995 tgagttcatctggatcagca 33014
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 cgtcggcgaactccaccgcc 423 |||||||||||||||||||| Sbjct: 241332 cgtcggcgaactccaccgcc 241313
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ttgggatcggcaaacacgtt 368 |||||||||||||||||||| Sbjct: 178294 ttgggatcggcaaacacgtt 178313
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 ctgagttcatctggatcagc 578 |||||||||||||||||||| Sbjct: 152337 ctgagttcatctggatcagc 152356
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cgttctccagcagctggctc 384 |||||||||||||||||||| Sbjct: 400745 cgttctccagcagctggctc 400764
>gb|AC124627.22| Mus musculus chromosome 19, clone RP23-435K14, complete sequence Length = 228991 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 tggcctctgaacctgtaagt 605 |||||||||||||||||||| Sbjct: 42410 tggcctctgaacctgtaagt 42391
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ccgcctcttcgacgacgtcg 438 |||||||||||||||||||| Sbjct: 2237008 ccgcctcttcgacgacgtcg 2237027
>gb|AC117797.9| Mus musculus chromosome 19, clone RP24-555M16, complete sequence Length = 179740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 tggcctctgaacctgtaagt 605 |||||||||||||||||||| Sbjct: 52161 tggcctctgaacctgtaagt 52180 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,999,465 Number of Sequences: 3902068 Number of extensions: 4999465 Number of successful extensions: 108491 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108235 Number of HSP's gapped (non-prelim): 256 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)