ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17h22 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 155 bits (393), Expect = 5e-38 Identities = 74/131 (56%), Positives = 101/131 (77%) Frame = -3 Query: 543 ERPAVMNAFELISTSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPMGFN 364 ++P MNAFELIS +Q LNL LFE + + KRETRF S+ P EI++KIE AA P+GF+ Sbjct: 313 DQPTSMNAFELISLNQALNLDNLFEAKKE-YKRETRFTSQCPPKEIITKIEEAAKPLGFD 371 Query: 363 VQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHSISNGL 184 +QK+NYK++++ GRKG L +ATEVF+V PSL++VEL+K+ GDTLEF KFY ++S L Sbjct: 372 IQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQL 431 Query: 183 KDVMWKPEGSI 151 KDV+WK +G + Sbjct: 432 KDVVWKCDGEV 442
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 139 bits (351), Expect = 4e-33 Identities = 65/138 (47%), Positives = 98/138 (71%) Frame = -3 Query: 543 ERPAVMNAFELISTSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPMGFN 364 E P +MNAFE+I+ SQGLNL LF+++ D VKR+TRF SR +EI++ IEA A MGF Sbjct: 305 EGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFK 364 Query: 363 VQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHSISNGL 184 RN+K +L+G + + GQLA+ E++EV PSL+MV++RK+ G+TLE+HKFY + + L Sbjct: 365 SHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKL 424 Query: 183 KDVMWKPEGSIAEGDETR 130 ++++W+ I + + R Sbjct: 425 ENIIWRATEGIPKSEILR 442
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 96.3 bits (238), Expect = 5e-20 Identities = 55/125 (44%), Positives = 80/125 (64%), Gaps = 2/125 (1%) Frame = -3 Query: 543 ERPAVMNAFELISTSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPMGFN 364 + P ++NAF+LI S L+L FE++ S +R RF S A ++L KIE A MGF+ Sbjct: 313 DSPTIINAFQLIGMSSFLDLSGFFEQENVS-ERRIRFTSNSSAKDLLEKIETAVTEMGFS 371 Query: 363 VQKRNYKLKLQGENPGRKGQ--LAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHSISN 190 VQK++ KL+++ E +KGQ L++ EVFE+ PSL +VELRKS GD+ + + Y + Sbjct: 372 VQKKHAKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERL-- 429 Query: 189 GLKDV 175 LKDV Sbjct: 430 -LKDV 433
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 68.2 bits (165), Expect = 1e-11 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = -3 Query: 528 MNAFELISTSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRN 349 +NAFE+IS S G +L LFEK + K E RF S A+EI K+ + V+K+ Sbjct: 304 LNAFEIISLSTGFDLSGLFEKGEE--KEEMRFTSNREASEITEKLVEIGKDLKMKVRKKE 361 Query: 348 Y--KLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHK 211 + ++K+ E + EVFE+ PS +MV L+KS GDT E+ + Sbjct: 362 HEWRVKMSAE------ATVVEAEVFEIAPSYHMVVLKKSGGDTAEYKR 403
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%) Frame = -3 Query: 528 MNAFELISTSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKR- 352 +NAF+LIS S GL+L LF ++S RF S + ++E A ++K+ Sbjct: 307 LNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRMKKKK 366 Query: 351 --NYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGD 229 Y +++G+N G+ I + + L +VE R+ GD Sbjct: 367 EEEYGFEMEGQN----GKFGIGICISRLNDLLVVVEARRRGGD 405
>CHK1_MOUSE (O35280) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 37.4 bits (85), Expect = 0.028 Identities = 25/94 (26%), Positives = 43/94 (45%) Frame = -3 Query: 453 VKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEV 274 VKR TRF ++L A++ ++ +G+ +K R +L + E+ Sbjct: 374 VKRMTRFFTKLDADKSYQCLKETFEKLGYQWKKSCMNQVTVSTTDRRNNKLIFKINLVEM 433 Query: 273 TPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVM 172 + +V+ R S GD LEF + + I L DV+ Sbjct: 434 DEKI-LVDFRLSKGDGLEFKRHFLKIKGKLSDVV 466
>CHK1_HUMAN (O14757) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 37.0 bits (84), Expect = 0.036 Identities = 24/94 (25%), Positives = 43/94 (45%) Frame = -3 Query: 453 VKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEV 274 VKR TRF ++L A++ ++ +G+ +K R +L + E+ Sbjct: 374 VKRMTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEM 433 Query: 273 TPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVM 172 + +V+ R S GD LEF + + I L D++ Sbjct: 434 DDKI-LVDFRLSKGDGLEFKRHFLKIKGKLIDIV 466
>CHK1_RAT (Q91ZN7) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 36.2 bits (82), Expect = 0.062 Identities = 24/94 (25%), Positives = 43/94 (45%) Frame = -3 Query: 453 VKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEV 274 VKR TRF ++L A++ ++ +G+ +K R +L + E+ Sbjct: 374 VKRMTRFFTKLDADKSYQCLKETFEKLGYQWKKSCMNQVTVSTMDRRNNKLIFKINLVEM 433 Query: 273 TPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVM 172 + +V+ R S GD LEF + + I L D++ Sbjct: 434 DEKI-LVDFRLSKGDGLEFKRHFLKIKGKLSDIV 466
>CHK1_CHICK (Q8AYC9) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1)| Length = 476 Score = 35.4 bits (80), Expect = 0.11 Identities = 25/94 (26%), Positives = 41/94 (43%) Frame = -3 Query: 453 VKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEV 274 V+R TRF ++L A+ + MG+ ++ R +L + E+ Sbjct: 374 VRRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLEM 433 Query: 273 TPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVM 172 S +V+ R S GD LEF + + I L DV+ Sbjct: 434 E-SRILVDFRLSKGDGLEFKRHFLKIKGKLSDVV 466
>CHK1_XENLA (Q6DE87) Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (xChk1| protein) Length = 474 Score = 32.3 bits (72), Expect = 0.89 Identities = 23/94 (24%), Positives = 41/94 (43%) Frame = -3 Query: 453 VKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEV 274 VKR TRF +++ A S + MG+ ++K R +L + E+ Sbjct: 373 VKRMTRFFTKVNAESSYSNLMDTCEKMGYVLKKSCANEVTLSTTDRRNNKLIFKVNLVEM 432 Query: 273 TPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVM 172 + +++ R S GD LEF + + I + V+ Sbjct: 433 EDRI-LLDFRLSKGDGLEFKRHFLKIKKKMDAVV 465
>SLH1_YEAST (P53327) Antiviral helicase SLH1 (EC 3.6.1.-) (SKI2-like helicase| 1) Length = 1967 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/63 (36%), Positives = 33/63 (52%) Frame = -3 Query: 417 ANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKS 238 A EI+ K P FN+Q R +L G+ K ++ +AT+V TP + V RK+ Sbjct: 359 AAEIVDKFSKKLAP--FNIQVR----ELTGDMQLTKAEI-LATQVIVTTPEKWDVVTRKA 411 Query: 237 NGD 229 NGD Sbjct: 412 NGD 414
>CHK1_SCHPO (P34208) Serine/threonine-protein kinase chk1 (EC 2.7.11.1)| (Checkpoint kinase 1) Length = 496 Score = 31.6 bits (70), Expect = 1.5 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%) Frame = -3 Query: 450 KRETRFASRLPANEILSKIEAAAGPMGFNVQK---RNYKLKLQGENPGRKGQLAIATEVF 280 +R TRF SR I+ + + + +V RN + + RK L E+ Sbjct: 393 ERLTRFYSRASRETIIDHLYDSLRLLAISVTMKYVRNQTILYVNLHDKRKCLLQGVIELT 452 Query: 279 EVTPSLYMVELRKSNGDTLEFHKFYHSISNGL 184 + +L ++ K NGD LE+ KF+ ++ + + Sbjct: 453 NLGHNLELINFIKRNGDPLEWRKFFKNVVSSI 484
>TRM1_PYRAB (Q9V1P3) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC| 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) Length = 383 Score = 28.9 bits (63), Expect = 9.9 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = -3 Query: 447 RETRFASRLPANEI-LSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVT 271 R RFA PA EI ++ I A +N+ K+N L +GE G+ + +E Sbjct: 65 RGIRFALETPAEEIWMNDISEDA----YNLMKKNVLLNFKGELEESNGRAVLKSE----- 115 Query: 270 PSLYMVELRKSNGDTLEFHKFYHSI 196 +V +N E H+++H I Sbjct: 116 -KTLVVNHDDANRLMAEKHRYFHFI 139
>PPCK_CHLCV (Q821M4) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 600 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 15/52 (28%) Frame = -3 Query: 279 EVTPSLYMV-----------ELRKSNGDTLEFHKFYHSI----SNGLKDVMW 169 E+T S Y+V E+ KS G T FHK HS+ S G KDV W Sbjct: 140 ELTDSPYVVCSMKIMTRMGAEVLKSLGTTGSFHKCLHSVGAPLSPGEKDVAW 191
>Y861_METJA (Q58271) Hypothetical UPF0036 protein MJ0861| Length = 448 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -3 Query: 294 ATEVFEVTPSLYMVELRKSNGDTLEFHKFYHSISNGLKDVMWKPEGSIAEGDETRHRRSP 115 A E ++TP++ TLEF + HSI + + V+ P GSI G++ + P Sbjct: 132 AGESIDLTPNI-----------TLEFIRITHSIPDSVLPVLHTPYGSIVYGNDFKFDNFP 180
>ILVH_ECOLI (P00894) Acetolactate synthase isozyme III small subunit (EC| 2.2.1.6) (AHAS-III) (Acetohydroxy-acid synthase III small subunit) (ALS-III) Length = 163 Score = 28.9 bits (63), Expect = 9.9 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 16/107 (14%) Frame = -3 Query: 504 TSQGLNLGTLFEKQTDSVKRETRFASRLPANEILSKIEAAAGPM-----------GFNVQ 358 + +G N+ +L TD + ++L +IE + G +V+ Sbjct: 24 SQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVE 83 Query: 357 KRNYKLKLQGENPGRKGQLAIATEVF-----EVTPSLYMVELRKSNG 232 + +K+Q GR ++ TE+F +VTPSLY V+L ++G Sbjct: 84 REIMLVKIQASGYGRD-EVKRNTEIFRGQIIDVTPSLYTVQLAGTSG 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,397,403 Number of Sequences: 219361 Number of extensions: 1662508 Number of successful extensions: 4165 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4157 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
