ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17h14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195672.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0004A10.11), mRNA Length = 861 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 347 gtgaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctct 406 |||||||| |||||||| |||||||| || ||||| |||| |||||| || |||| |||| Sbjct: 620 gtgaactgatcggtgaaatatggccaacatagcatgggcactccattacgaatgctctct 561 Query: 407 agcgtggagttccacccgca 426 | ||| |||||||||||||| Sbjct: 560 accgttgagttccacccgca 541
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 347 gtgaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctct 406 |||||||| |||||||| |||||||| || ||||| |||| |||||| || |||| |||| Sbjct: 80382 gtgaactgatcggtgaaatatggccaacatagcatgggcactccattacgaatgctctct 80441 Query: 407 agcgtggagttccacccgca 426 | ||| |||||||||||||| Sbjct: 80442 accgttgagttccacccgca 80461
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 347 gtgaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctct 406 |||||||| |||||||| |||||||| || ||||| |||| |||||| || |||| |||| Sbjct: 8350864 gtgaactgatcggtgaaatatggccaacatagcatgggcactccattacgaatgctctct 8350805 Query: 407 agcgtggagttccacccgca 426 | ||| |||||||||||||| Sbjct: 8350804 accgttgagttccacccgca 8350785 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 308 agcccgaccctccagatgtcacagatatatgtctggttcgtgaactggtcggtgaagtat 367 |||||||||| ||||||||| ||||| || | | |||| ||||||||||| |||||| Sbjct: 8917024 agcccgacccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtag 8917083 Query: 368 ggcca 372 ||||| Sbjct: 8917084 ggcca 8917088
>dbj|AK106038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D10, full insert sequence Length = 1666 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 347 gtgaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctct 406 |||||||| |||||||| |||||||| || ||||| |||| |||||| || |||| |||| Sbjct: 1253 gtgaactgatcggtgaaatatggccaacatagcatgggcactccattacgaatgctctct 1194 Query: 407 agcgtggagttccacccgca 426 | ||| |||||||||||||| Sbjct: 1193 accgttgagttccacccgca 1174
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 347 gtgaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctct 406 |||||||| |||||||| |||||||| || ||||| |||| |||||| || |||| |||| Sbjct: 8355963 gtgaactgatcggtgaaatatggccaacatagcatgggcactccattacgaatgctctct 8355904 Query: 407 agcgtggagttccacccgca 426 | ||| |||||||||||||| Sbjct: 8355903 accgttgagttccacccgca 8355884 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 308 agcccgaccctccagatgtcacagatatatgtctggttcgtgaactggtcggtgaagtat 367 |||||||||| ||||||||| ||||| || | | |||| ||||||||||| |||||| Sbjct: 8922163 agcccgacccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtag 8922222 Query: 368 ggcca 372 ||||| Sbjct: 8922223 ggcca 8922227
>ref|NM_191604.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1810 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 |||||||||||| || ||||||||||||||||| Sbjct: 1347 gatgccctctagtgtcgagttccacccgcagtg 1315
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 339 tctggttcgtgaactggtcggtgaagtatggccagca 375 |||||||| |||||||||||||||||| |||||||| Sbjct: 123539 tctggttcaagaactggtcggtgaagtagggccagca 123503 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 339 tctggttcgtgaactggtcggtgaagtatggcca 372 |||||||| |||||||||||| ||||||||||| Sbjct: 130678 tctggttcatgaactggtcggcaaagtatggcca 130645 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 gaactggtcggtgaagtatggccagcagag 378 ||||||||||| |||||| ||||||||||| Sbjct: 128165 gaactggtcggcgaagtagggccagcagag 128136
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 |||||||||||| || ||||||||||||||||| Sbjct: 3918969 gatgccctctagtgtcgagttccacccgcagtg 3918937 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ccctctagcgtggagttccacccgcagtg 429 ||||| ||||| ||||||||||||||||| Sbjct: 30705902 ccctccagcgtcgagttccacccgcagtg 30705930 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||| |||| ||||||||||||||||| Sbjct: 30649808 gatgccctccagcgccgagttccacccgcagtg 30649776 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 30683563 cctccagcgtcgagttccacccgcagtg 30683590 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggagttccacccgcagtg 429 |||||||||||||||||||| Sbjct: 28302101 gtggagttccacccgcagtg 28302082 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 25593389 cctccagcgtcgagttccacccgcagtg 25593362 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 24708589 cctccagcgtcgagttccacccgcagtg 24708616 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 23460961 cctccagcgtcgagttccacccgcagtg 23460934 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 23453418 cctccagcgtcgagttccacccgcagtg 23453391 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 4152476 cctccagcgtcgagttccacccgcagtg 4152503
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 |||||||||||| || ||||||||||||||||| Sbjct: 40873 gatgccctctagtgtcgagttccacccgcagtg 40841
>dbj|AK103303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125D02, full insert sequence Length = 1809 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 |||||||||||| || ||||||||||||||||| Sbjct: 1346 gatgccctctagtgtcgagttccacccgcagtg 1314
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||||||||||||||||||||| Sbjct: 10002985 cctccagcgtggagttccacccgcagtg 10003012
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||||||||||||||||||||| Sbjct: 76550 cctccagcgtggagttccacccgcagtg 76577
>gb|AY109290.1| Zea mays PCO107526 mRNA sequence Length = 829 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||||||||||||||||||||| Sbjct: 312 cctccagcgtggagttccacccgcagtg 285
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 gccctctagcgtggagttccacccgcagtg 429 |||||| ||||| ||||||||||||||||| Sbjct: 154677 gccctccagcgtcgagttccacccgcagtg 154706
>dbj|AK068040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B16, full insert sequence Length = 1656 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tggagttccacccgcagtgtgt 432 |||||||||||||||||||||| Sbjct: 1168 tggagttccacccgcagtgtgt 1147
>gb|AC168120.3| Mus musculus BAC clone RP23-49A14 from chromosome 3, complete sequence Length = 198651 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 173 ctcatgtttttctccgccatctccttcaa 201 |||||||||||||| ||| |||||||||| Sbjct: 58476 ctcatgtttttctctgccttctccttcaa 58448
>ref|XM_469830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1632 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 349 gaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctctag 408 |||||||||| |||||| |||||||| || | ||||| || ||||| | || || || Sbjct: 1168 gaactggtcgcagaagtacggccagcacaggaacggcacgccgttgcgcaccccttccag 1109 Query: 409 cgtggagttccacccgcagtg 429 ||| ||||||||||||||||| Sbjct: 1108 cgtcgagttccacccgcagtg 1088
>ref|NM_195768.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0027A14.2), mRNA Length = 1479 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 308 agcccgaccctccagatgtcacagatatatgtctggttcgtgaactggtcggtgaagtat 367 |||||||||| ||||||||| ||||| || | | |||| ||||||||||| |||||| Sbjct: 1286 agcccgacccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtag 1227 Query: 368 ggcca 372 ||||| Sbjct: 1226 ggcca 1222
>ref|NM_191572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 ccctctagcgtggagttccacccgcagtg 429 ||||| ||||| ||||||||||||||||| Sbjct: 1118 ccctccagcgtcgagttccacccgcagtg 1090
>ref|NM_191561.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||| |||| ||||||||||||||||| Sbjct: 1137 gatgccctccagcgccgagttccacccgcagtg 1105
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Plus Query: 349 gaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctctag 408 |||||||||| |||||| |||||||| || | ||||| || ||||| | || || || Sbjct: 30991041 gaactggtcgcagaagtacggccagcacaggaacggcacgccgttgcgcaccccttccag 30991100 Query: 409 cgtggagttccacccgcagtg 429 ||| ||||||||||||||||| Sbjct: 30991101 cgtcgagttccacccgcagtg 30991121 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 35077005 cctccagcgtcgagttccacccgcagtg 35077032 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 13755334 cctccagcgtcgagttccacccgcagtg 13755307
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 349 gaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctctag 408 |||||||||| |||||| |||||||| || | ||||| || ||||| | || || || Sbjct: 105023 gaactggtcgcagaagtacggccagcacaggaacggcacgccgttgcgcaccccttccag 104964 Query: 409 cgtggagttccacccgcagtg 429 ||| ||||||||||||||||| Sbjct: 104963 cgtcgagttccacccgcagtg 104943
>gb|BT009372.1| Triticum aestivum clone wlm96.pk028.k4:fis, full insert mRNA sequence Length = 1736 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||||| || ||||||||||||||||| Sbjct: 1228 gatgccctctattgttgagttccacccgcagtg 1196
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 308 agcccgaccctccagatgtcacagatatatgtctggttcgtgaactggtcggtgaagtat 367 |||||||||| ||||||||| ||||| || | | |||| ||||||||||| |||||| Sbjct: 121631 agcccgacccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtag 121690 Query: 368 ggcca 372 ||||| Sbjct: 121691 ggcca 121695
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Plus Query: 349 gaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctctag 408 |||||||||| |||||| |||||||| || | ||||| || ||||| | || || || Sbjct: 31081564 gaactggtcgcagaagtacggccagcacaggaacggcacgccgttgcgcaccccttccag 31081623 Query: 409 cgtggagttccacccgcagtg 429 ||| ||||||||||||||||| Sbjct: 31081624 cgtcgagttccacccgcagtg 31081644 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 35167077 cctccagcgtcgagttccacccgcagtg 35167104 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 13750309 cctccagcgtcgagttccacccgcagtg 13750282
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ccctctagcgtggagttccacccgcagtg 429 ||||| ||||| ||||||||||||||||| Sbjct: 148179 ccctccagcgtcgagttccacccgcagtg 148207 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||| |||| ||||||||||||||||| Sbjct: 92085 gatgccctccagcgccgagttccacccgcagtg 92053 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 125840 cctccagcgtcgagttccacccgcagtg 125867
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 308 agcccgaccctccagatgtcacagatatatgtctggttcgtgaactggtcggtgaagtat 367 |||||||||| ||||||||| ||||| || | | |||| ||||||||||| |||||| Sbjct: 5247 agcccgacccgccagatgtcgcagatgtacgcccggttgacgaactggtcggcgaagtag 5306 Query: 368 ggcca 372 ||||| Sbjct: 5307 ggcca 5311
>gb|AF474923.1| Hordeum vulgare subsp. vulgare chalcone isomerase (CHI) gene, complete cds Length = 11475 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atctcgttttactctaacaat 21 ||||||||||||||||||||| Sbjct: 3014 atctcgttttactctaacaat 3034
>gb|AC018866.9| Homo sapiens BAC clone RP11-57J18 from 2, complete sequence Length = 154983 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 agctccaccaccttctctttc 271 ||||||||||||||||||||| Sbjct: 72599 agctccaccaccttctctttc 72579
>dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093B13, full insert sequence Length = 1779 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||| |||| ||||||||||||||||| Sbjct: 1246 gatgccctccagcgccgagttccacccgcagtg 1214
>dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114D10, full insert sequence Length = 3206 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 ccctctagcgtggagttccacccgcagtg 429 ||||| ||||| ||||||||||||||||| Sbjct: 245 ccctccagcgtcgagttccacccgcagtg 273
>dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J15, full insert sequence Length = 1674 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 ccctctagcgtggagttccacccgcagtg 429 ||||| ||||| ||||||||||||||||| Sbjct: 1202 ccctccagcgtcgagttccacccgcagtg 1174
>dbj|AK071136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078E19, full insert sequence Length = 1580 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 349 gaactggtcggtgaagtatggccagcagagcatcggcagtccattgcggatgccctctag 408 |||||||||| |||||| |||||||| || | ||||| || ||||| | || || || Sbjct: 1185 gaactggtcgcagaagtacggccagcacaggaacggcacgccgttgcgcaccccttccag 1126 Query: 409 cgtggagttccacccgcagtg 429 ||| ||||||||||||||||| Sbjct: 1125 cgtcgagttccacccgcagtg 1105
>dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D01, full insert sequence Length = 1664 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 397 gatgccctctagcgtggagttccacccgcagtg 429 ||||||||| |||| ||||||||||||||||| Sbjct: 1197 gatgccctccagcgccgagttccacccgcagtg 1165
>ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1168 cctccagcgtcgagttccacccgcagtg 1141
>ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 1223 atgctctccagcgtcgagttccacccgcagtg 1192
>ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.27 mRNA Length = 2591 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 1220 atgctctccagcgtcgagttccacccgcagtg 1189
>ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1138 cctccagcgtcgagttccacccgcagtg 1111
>ref|NM_191567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1123 cctccagcgtcgagttccacccgcagtg 1096
>ref|NM_192094.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggagttccacccgcagtg 429 |||||||||||||||||||| Sbjct: 1070 gtggagttccacccgcagtg 1051
>ref|NM_192244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1135 cctccagcgtcgagttccacccgcagtg 1108
>ref|NM_192834.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1135 cctccagcgtcgagttccacccgcagtg 1108
>ref|XM_463383.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1144 cctccagcgtcgagttccacccgcagtg 1117
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tggccagcagagcatcggca 386 |||||||||||||||||||| Sbjct: 131281 tggccagcagagcatcggca 131300 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 gagttccacccgcagtgtgt 432 |||||||||||||||||||| Sbjct: 92502 gagttccacccgcagtgtgt 92521
>gb|BT018506.1| Zea mays clone EL01N0428C11.d mRNA sequence Length = 1203 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| |||||||||||||| |||||||| Sbjct: 672 cctccagcgtggagttccaaccgcagtg 645
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 19646 cctccagcgtcgagttccacccgcagtg 19673 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 16845 cctccagcgtcgagttccacccgcagtg 16872
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 97956 cctccagcgtcgagttccacccgcagtg 97983 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 95155 cctccagcgtcgagttccacccgcagtg 95182
>gb|AC186560.1| Gasterosteus aculeatus clone VMRC26-98C14, complete sequence Length = 92037 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttctccgccatctccttcaa 201 |||||||||||||||||||| Sbjct: 60956 ttctccgccatctccttcaa 60937
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 77906 cctccagcgtcgagttccacccgcagtg 77933
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccaccaccttctctttca 272 |||||||||||||||||||| Sbjct: 80982 ctccaccaccttctctttca 81001
>emb|Z29443.1|CET07C4 Caenorhabditis elegans Cosmid T07C4, complete sequence Length = 33477 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tctccttcaacctcagcatt 211 |||||||||||||||||||| Sbjct: 24223 tctccttcaacctcagcatt 24242
>ref|XM_645767.1| Entamoeba histolytica HM-1:IMSS ubiquitin-protein ligase E3 component (195.t00010) partial mRNA Length = 4158 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ctccattagcacattcatattgtt 153 ||||||||| |||||||||||||| Sbjct: 128 ctccattagtacattcatattgtt 151
>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence Length = 145073 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caccttctctttcatcacca 278 |||||||||||||||||||| Sbjct: 71153 caccttctctttcatcacca 71172
>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence Length = 142205 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caccttctctttcatcacca 278 |||||||||||||||||||| Sbjct: 71053 caccttctctttcatcacca 71034
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ccgccaccatcggccgacgc 300 |||||||||||||||||||| Sbjct: 3270874 ccgccaccatcggccgacgc 3270893
>emb|BX323839.13| Zebrafish DNA sequence from clone CH211-217K17 in linkage group 1, complete sequence Length = 155358 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tgaactggtcggtgaagtat 367 |||||||||||||||||||| Sbjct: 147349 tgaactggtcggtgaagtat 147368
>dbj|AB095265.1| Verticillium dahliae DNA, clone:VDf35, retrotransposon-like sequence Length = 6567 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 ttcatcaccagcccgccaccatcg 292 ||||||||||||| |||||||||| Sbjct: 431 ttcatcaccagcctgccaccatcg 454
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 31862 cctccagcgtcgagttccacccgcagtg 31835
>gb|AC149489.2| Medicago truncatula chromosome 2 BAC clone mth2-24b4, complete sequence Length = 110753 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccaccaccttctctttca 272 |||||||||||||||||||| Sbjct: 23369 ctccaccaccttctctttca 23388
>ref|XM_624387.1| PREDICTED: Apis mellifera similar to CG7070-PB, isoform B (LOC552007), mRNA Length = 1897 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 cagcagctccaccaccttct 266 |||||||||||||||||||| Sbjct: 361 cagcagctccaccaccttct 342
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tggccagcagagcatcggca 386 |||||||||||||||||||| Sbjct: 18488851 tggccagcagagcatcggca 18488870
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 25994885 cctccagcgtcgagttccacccgcagtg 25994912 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 25992084 cctccagcgtcgagttccacccgcagtg 25992111
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 31810874 atgctctccagcgtcgagttccacccgcagtg 31810905 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 5777086 cctccagcgtcgagttccacccgcagtg 5777059
>gb|AC005777.1|AC005777 Homo sapiens chromosome 19, cosmid F16403, complete sequence Length = 43190 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccagcagctccaccaccttc 265 |||||||||||||||||||| Sbjct: 19350 ccagcagctccaccaccttc 19331
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 134552 cctccagcgtcgagttccacccgcagtg 134579
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggagttccacccgcagtg 429 |||||||||||||||||||| Sbjct: 136608 gtggagttccacccgcagtg 136589
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggagttccacccgcagtg 429 |||||||||||||||||||| Sbjct: 17201 gtggagttccacccgcagtg 17182
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 40195 cctccagcgtcgagttccacccgcagtg 40168
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 120992 cctccagcgtcgagttccacccgcagtg 120965
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 99447 cctccagcgtcgagttccacccgcagtg 99474
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 77166 cctccagcgtcgagttccacccgcagtg 77193
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 24266 cctccagcgtcgagttccacccgcagtg 24239 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 16723 cctccagcgtcgagttccacccgcagtg 16696
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 106672 atgctctccagcgtcgagttccacccgcagtg 106703
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 6888 cctccagcgtcgagttccacccgcagtg 6861
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 66600 cctccagcgtcgagttccacccgcagtg 66573
>dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C02, full insert sequence Length = 1581 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 219 cctccagcgtcgagttccacccgcagtg 246
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 161706 cctccagcgtcgagttccacccgcagtg 161733
>dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H01, full insert sequence Length = 1491 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 238 cctccagcgtcgagttccacccgcagtg 265
>dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C10, full insert sequence Length = 1849 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggagttccacccgcagtg 429 |||||||||||||||||||| Sbjct: 1192 gtggagttccacccgcagtg 1173
>dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H05, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 829 cctccagcgtcgagttccacccgcagtg 802
>dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-G02, full insert sequence Length = 1463 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 167 cctccagcgtcgagttccacccgcagtg 194
>dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E08, full insert sequence Length = 1603 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1148 cctccagcgtcgagttccacccgcagtg 1121
>dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E02, full insert sequence Length = 2591 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 1220 atgctctccagcgtcgagttccacccgcagtg 1189
>dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K24, full insert sequence Length = 1896 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1232 cctccagcgtcgagttccacccgcagtg 1205
>dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102B03, full insert sequence Length = 1675 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1233 cctccagcgtcgagttccacccgcagtg 1206
>dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I21, full insert sequence Length = 1896 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1232 cctccagcgtcgagttccacccgcagtg 1205
>gb|AY810506.1| Schistosoma japonicum clone SJCHGC02839 unknown mRNA Length = 840 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctccattagcacattcatat 149 |||||||||||||||||||| Sbjct: 595 ctccattagcacattcatat 576
>dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001K02, full insert sequence Length = 1597 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1024 cctccagcgtcgagttccacccgcagtg 997
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 agcagctccaccaccttctc 267 |||||||||||||||||||| Sbjct: 166774 agcagctccaccaccttctc 166755
>dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D08, full insert sequence Length = 1662 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 398 atgccctctagcgtggagttccacccgcagtg 429 |||| ||| ||||| ||||||||||||||||| Sbjct: 1223 atgctctccagcgtcgagttccacccgcagtg 1192
>dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H06, full insert sequence Length = 1962 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| ||||| ||||||||||||||||| Sbjct: 1234 cctccagcgtcgagttccacccgcagtg 1207
>gb|AC174720.1| Gasterosteus aculeatus clone VMRC26-98K03, complete sequence Length = 92037 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttctccgccatctccttcaa 201 |||||||||||||||||||| Sbjct: 60956 ttctccgccatctccttcaa 60937
>emb|CT033752.6| Mouse DNA sequence from clone RP23-140I20 on chromosome 17, complete sequence Length = 216455 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 agcagctccaccaccttctc 267 |||||||||||||||||||| Sbjct: 137393 agcagctccaccaccttctc 137374
>emb|CT025668.10| Mouse DNA sequence from clone RP24-370M11 on chromosome 17, complete sequence Length = 230212 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccaccaccttctctttca 272 |||||||||||||||||||| Sbjct: 67873 ctccaccaccttctctttca 67892
>gb|L34847.1|MZEIAGLU Zea mays IAA-glu synthetase (iaglu) mRNA, complete cds Length = 1416 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 cctctagcgtggagttccacccgcagtg 429 |||| |||||||||||||| |||||||| Sbjct: 1102 cctccagcgtggagttccaaccgcagtg 1075 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,625,889 Number of Sequences: 3902068 Number of extensions: 3625889 Number of successful extensions: 69580 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 68947 Number of HSP's gapped (non-prelim): 648 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
