ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, co... 44 0.23
2gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, co... 44 0.23
3gb|AC146198.2| Pan troglodytes BAC clone CH251-475M5 from Y, com... 44 0.23
4gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, com... 44 0.23
5gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, co... 44 0.23
6gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, com... 44 0.23
7gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, compl... 44 0.23
8dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, ... 44 0.23
9gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.23
10gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, compl... 44 0.23
11gb|AC151800.2| Pan troglodytes BAC clone CH251-261E10 from chrom... 44 0.23
12gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromo... 44 0.23
13gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y,... 44 0.23
14gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y,... 44 0.23
15gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y... 44 0.23
16gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y,... 44 0.23
17ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 44 0.23
18gb|AC087101.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 0.90
19gb|AC087042.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 0.90
20emb|AL354760.11| Human DNA sequence from clone RP4-671G15 on chr... 42 0.90
21gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Ho... 42 0.90
22emb|CR610673.1| full-length cDNA clone CS0DF023YJ10 of Fetal bra... 42 0.90
23gb|AC097261.6| Homo sapiens X BAC RP11-109P4 (Roswell Park Cance... 42 0.90
24gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 0.90
25emb|BX294378.5| Mouse DNA sequence from clone RP23-457B12 on chr... 42 0.90
26emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chro... 42 0.90
27gb|AC123647.9| Mus musculus chromosome 3, clone RP23-105J10, com... 40 3.5
28ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, ... 40 3.5
29gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome... 40 3.5
30gb|AC165179.2| Zea mays clone ZMMBBb-37E5, complete sequence 40 3.5
31emb|AL441884.5| Human DNA sequence from clone RP11-19A22 on chro... 40 3.5
32emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 3.5
33gb|AC098616.2| Homo sapiens chromosome 3 clone RP11-279I18, comp... 40 3.5
34gb|AC092503.2| Homo sapiens chromosome 3 clone RP11-539L2, compl... 40 3.5
35emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 i... 40 3.5
36gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Canc... 40 3.5
37gb|AC021107.3|AC021107 Homo sapiens BAC clone RP11-178M5 from Y,... 40 3.5
38gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y,... 40 3.5
39emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 ... 40 3.5
40gb|AC115888.10| Mus musculus chromosome 3, clone RP24-399D16, co... 40 3.5
41emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chrom... 40 3.5 
>gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, complete sequence
          Length = 166356

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 94563 gacacacacacagaaatctaaa 94584
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>gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, complete sequence
          Length = 195158

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 57910 gacacacacacagaaatctaaa 57889
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>gb|AC146198.2| Pan troglodytes BAC clone CH251-475M5 from Y, complete sequence
          Length = 220557

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 215118 gacacacacacagaaatctaaa 215097
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>gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, complete sequence
          Length = 169760

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 5429 gacacacacacagaaatctaaa 5450
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>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence
          Length = 229006

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 30570 gacacacacacagaaatctaaa 30591
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>gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, complete sequence
          Length = 183460

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 109619 gacacacacacagaaatctaaa 109598
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>gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, complete sequence
          Length = 183293

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 137584 gacacacacacagaaatctaaa 137605
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>dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, complete sequence
          Length = 171013

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 99406 gacacacacacagaaatctaaa 99385
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      gacacacacacagaaatctaaa 149
                ||||||||||||||||||||||
Sbjct: 11527399 gacacacacacagaaatctaaa 11527378



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 128      gacacacacacagaaatctaaa 149
                ||||||||||||||||||||||
Sbjct: 10658047 gacacacacacagaaatctaaa 10658068



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 3628940 gacacacacacagaaatctaaa 3628919



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 2689281 gacacacacacagaaatctaaa 2689302
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>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence
          Length = 173317

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 129   acacacacacagaaatctaaac 150
             ||||||||||||||||||||||
Sbjct: 11869 acacacacacagaaatctaaac 11848
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>gb|AC151800.2| Pan troglodytes BAC clone CH251-261E10 from chromosome y, complete
            sequence
          Length = 149719

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 7817 gacacacacacagaaatctaaa 7796
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>gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromosome y, complete
              sequence
          Length = 171231

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 138190 gacacacacacagaaatctaaa 138211
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>gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y, complete sequence
          Length = 100627

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 3616 gacacacacacagaaatctaaa 3595
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>gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y, complete sequence
          Length = 166436

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 42703 gacacacacacagaaatctaaa 42682
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>gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y, complete sequence
          Length = 205237

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 100702 gacacacacacagaaatctaaa 100723
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>gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y, complete sequence
          Length = 182083

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 137296 gacacacacacagaaatctaaa 137317
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 4214191 gacacacacacagaaatctaaa 4214212



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 1834115 gacacacacacagaaatctaaa 1834094



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 739797 gacacacacacagaaatctaaa 739818



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 224826 gacacacacacagaaatctaaa 224805
to top
>gb|AC087101.2| Rattus norvegicus strain Brown Norway clone RP31-230B14, complete
            sequence
          Length = 27615

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  cacacacagaaatctaaacta 152
            |||||||||||||||||||||
Sbjct: 3487 cacacacagaaatctaaacta 3507
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>gb|AC087042.2| Rattus norvegicus strain Brown Norway clone RP31-314L24, complete
              sequence
          Length = 110542

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    cacacacagaaatctaaacta 152
              |||||||||||||||||||||
Sbjct: 109979 cacacacagaaatctaaacta 109999
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>emb|AL354760.11| Human DNA sequence from clone RP4-671G15 on chromosome 1p13.1-13.3
             Contains the 3' end of the gene for a novel protein, the
             5' end of the WNT2B gene for wingless-type MMTV
             integration site family, member 2B and a CpG island,
             complete sequence
          Length = 111977

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    gaaaaagcatacaacaaaacc 80
             |||||||||||||||||||||
Sbjct: 92365 gaaaaagcatacaacaaaacc 92385
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>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 231332

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   cacacacagaaatctaaacta 152
             |||||||||||||||||||||
Sbjct: 77853 cacacacagaaatctaaacta 77833
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>emb|CR610673.1| full-length cDNA clone CS0DF023YJ10 of Fetal brain of Homo sapiens
           (human)
          Length = 1261

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  gaaaaagcatacaacaaaacc 80
           |||||||||||||||||||||
Sbjct: 504 gaaaaagcatacaacaaaacc 524
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>gb|AC097261.6| Homo sapiens X BAC RP11-109P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97628

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   acacacacacagaaatctaaa 149
             |||||||||||||||||||||
Sbjct: 87283 acacacacacagaaatctaaa 87263
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    cacacacagaaatctaaacta 152
              |||||||||||||||||||||
Sbjct: 570553 cacacacagaaatctaaacta 570573
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>emb|BX294378.5| Mouse DNA sequence from clone RP23-457B12 on chromosome 2, complete
            sequence
          Length = 10516

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  acacacacacagaaatctaaa 149
            |||||||||||||||||||||
Sbjct: 8603 acacacacacagaaatctaaa 8623
to top
>emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chromosome 2, complete
           sequence
          Length = 211456

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 129 acacacacacagaaatctaaa 149
           |||||||||||||||||||||
Sbjct: 87  acacacacacagaaatctaaa 107
to top
>gb|AC123647.9| Mus musculus chromosome 3, clone RP23-105J10, complete sequence
          Length = 202415

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    acacagaaatctaaactaca 154
              ||||||||||||||||||||
Sbjct: 199134 acacagaaatctaaactaca 199115
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>ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, centromeric (IR2@) on
              chromosome Y
          Length = 389013

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    gacacacacacagaaatcta 147
              ||||||||||||||||||||
Sbjct: 313491 gacacacacacagaaatcta 313510
to top
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete
            sequence
          Length = 222535

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  acacacacacagaaatctaaacta 152
            ||||||||||| ||||||||||||
Sbjct: 2167 acacacacacacaaatctaaacta 2190
to top
>gb|AC165179.2| Zea mays clone ZMMBBb-37E5, complete sequence
          Length = 134893

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     taccaatgaaaaagcataca 72
              ||||||||||||||||||||
Sbjct: 104487 taccaatgaaaaagcataca 104506
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>emb|AL441884.5| Human DNA sequence from clone RP11-19A22 on chromosome 9 Contains part
             of a variant of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 137783

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gaaaaagcatacaacaaaac 79
             ||||||||||||||||||||
Sbjct: 51422 gaaaaagcatacaacaaaac 51441
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
              Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and
              two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     taccaatgaaaaagcataca 72
              ||||||||||||||||||||
Sbjct: 175672 taccaatgaaaaagcataca 175691
to top
>gb|AC098616.2| Homo sapiens chromosome 3 clone RP11-279I18, complete sequence
          Length = 159629

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 91114 acacacacacagaaatctaa 91133
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>gb|AC092503.2| Homo sapiens chromosome 3 clone RP11-539L2, complete sequence
          Length = 195568

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 34832 acacacacacagaaatctaa 34851
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>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15,
             complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 23835 acacacacacagaaatctaa 23854
to top
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 188768

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    acacacacacagaaatctaaacta 152
              ||||||||||| ||||||||||||
Sbjct: 119070 acacacacacacaaatctaaacta 119093
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>gb|AC021107.3|AC021107 Homo sapiens BAC clone RP11-178M5 from Y, complete sequence
          Length = 160601

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gacacacacacagaaatcta 147
             ||||||||||||||||||||
Sbjct: 45210 gacacacacacagaaatcta 45229
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>gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y, complete sequence
          Length = 148058

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gacacacacacagaaatcta 147
              ||||||||||||||||||||
Sbjct: 112316 gacacacacacagaaatcta 112297
to top
>emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 in linkage group 19,
              complete sequence
          Length = 159848

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    acacacacacagaaatctaa 148
              ||||||||||||||||||||
Sbjct: 150950 acacacacacagaaatctaa 150969
to top
>gb|AC115888.10| Mus musculus chromosome 3, clone RP24-399D16, complete sequence
          Length = 142265

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   acacagaaatctaaactaca 154
             ||||||||||||||||||||
Sbjct: 11272 acacagaaatctaaactaca 11253
to top
>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    acacacacacagaaatctaa 148
              ||||||||||||||||||||
Sbjct: 134571 acacacacacagaaatctaa 134552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,989,323
Number of Sequences: 3902068
Number of extensions: 11989323
Number of successful extensions: 62455
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62265
Number of HSP's gapped (non-prelim): 190
length of query: 272
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 250
effective length of database: 17,147,199,772
effective search space: 4286799943000
effective search space used: 4286799943000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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