Clone Name | rbasd17g19 |
---|---|
Clone Library Name | barley_pub |
>YAJ1_SCHPO (Q09901) Putative family 31 glucosidase C30D11.01c precursor (EC| 3.2.1.-) Length = 993 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -2 Query: 266 ETR*SAAALNIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDNSLNNLMKAVKDFLH 87 E++ S ALN + N P LLS + + HWL + Q+ + ++++ + L Sbjct: 634 ESKISFEALNSIQPNIRPFLLSRSTFVGSGRYAAHWLGDNKSQWSDMVSSISSILTFNLL 693 Query: 86 GDKMVSWGVC 57 G MV VC Sbjct: 694 GIPMVGADVC 703
>Y2065_PROMM (Q7V498) UPF0054 protein PMT2065| Length = 187 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +1 Query: 16 LTTLVXASSRRRP*HTPQLTILSPWRKSLTAFIK 117 LT+LV A ++RR LT SPW++ LTA+I+ Sbjct: 25 LTSLVDADTKRR------LTHASPWQQDLTAWIE 52
>AGLU_SCHPO (Q9C0Y4) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 969 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = -2 Query: 266 ETR*SAAALNIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDNSLNNLMKAVKDFLH 87 ET+ S AAL ++ N P +LS L HWL + + N ++ + + Sbjct: 609 ETKVSYAALTQISPNERPFILSRSTFLGSGVYGAHWLGDNHSLWSNMFFSISGMIVFNMM 668 Query: 86 GDKMVSWGVC 57 G MV VC Sbjct: 669 GIPMVGADVC 678
>MPTN_METMP (Q6LZC7) Tetrahydromethanopterin:alpha-L-glutamate ligase (EC| 6.3.2.-) (H(4)MPT:alpha-L-glutamate ligase) Length = 292 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = -2 Query: 176 FLSTHWLFSSLHQFDNSLNNLMKAVKDFLHGDKMVSWGVCQGRRLDEAXTNV 21 F STH + + +F N+ NN+ + ++ F+ GDK++S R D TN+ Sbjct: 166 FKSTHGVIY-MQEFVNNPNNVYRDIRAFVVGDKVIS---AMYRTSDNWITNI 213
>OR2L8_HUMAN (Q8NGY9) Olfactory receptor 2L8 (Olfactory receptor OR1-46)| Length = 312 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 11/62 (17%) Frame = -2 Query: 209 LLSMEGSL---WLDFLSTH------WLFSSLHQFD-NSLNNLM-KAVKDFLHGDKMVSWG 63 L+++ G+L L FL TH +L S L D N ++ ++ K DFLHG+K +S+ Sbjct: 35 LMALIGNLSMILLIFLDTHLHTPMYFLLSQLSLIDLNYISTIVPKMASDFLHGNKSISFT 94 Query: 62 VC 57 C Sbjct: 95 GC 96
>S27A4_MACFA (Q4R3Y4) Long-chain fatty acid transport protein 4 (EC 6.2.1.-)| (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4) Length = 643 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/58 (27%), Positives = 25/58 (43%) Frame = -2 Query: 278 CLRRETR*SAAALNIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDNSLNNLMKA 105 CLR + V R+ L EG+ THW F L ++ +S+ N ++A Sbjct: 69 CLRERRTVPILFASTVRRHPDKTALIFEGT------DTHWTFRQLDEYSSSVANFLQA 120
>DPOL_HBVW9 (P17100) P protein [Includes: DNA-directed DNA polymerase (EC| 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 845 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 178 SSHKDPSIDKSLG*LFRVTIFNAAALHLVSLRRQNTS 288 S H DPS++ S L + + AA HL + +RQ++S Sbjct: 264 SGHVDPSVNNSSSCLRQSAVRKAAYSHLSTSKRQSSS 300
>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin) Length = 1004 Score = 27.7 bits (60), Expect = 7.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 9 NXPHNISXGLIQTSSLTYPPAYHLVTMEKILNCLHQV 119 + P NI + TS+LTYPPA + + +L L ++ Sbjct: 184 SSPENILTYVAHTSALTYPPATRVKYPDNLLRPLSRL 220
>SNQ2_YEAST (P32568) Protein SNQ2| Length = 1501 Score = 27.7 bits (60), Expect = 7.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 246 SIEYSHPKQSSQAFVYGGILVAGFLVYSLV 157 S+ Y+ P +S AF GG+L L YSL+ Sbjct: 538 SLFYNTPSSTSGAFSRGGVLYFALLYYSLM 567
>GL34_ARATH (Q9FLT3) Putative germin-like protein subfamily 3 member 4| precursor Length = 210 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 237 YSHPKQSSQAFVYGGILVAGFLVYSLVIF 151 +SHP+ S FV G++ AGF+ + IF Sbjct: 106 HSHPRSSEMLFVVKGVVFAGFVDTNNKIF 134
>ACRO_RAT (P29293) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 437 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 245 ALNIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDN 129 +L I T ++ R + GSL L++HW+ ++ H FDN Sbjct: 59 SLQIFTSHNSRRYHACGGSL----LNSHWVLTAAHCFDN 93
>ACRO_MOUSE (P23578) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 436 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 245 ALNIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDN 129 +L I T ++ R + GSL L++HW+ ++ H FDN Sbjct: 59 SLQIFTSHNSRRYHACGGSL----LNSHWVLTAAHCFDN 93
>YL673_MIMIV (Q5UNT1) Putative serine/threonine-protein kinase L673 (EC| 2.7.11.1) Length = 545 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Frame = -2 Query: 239 NIVTRNSHPRLLSMEGSLWLDFLSTHWLFSSLHQFDNSL------NNLMKAVK 99 N++ + HP ++++EG + D ST ++ L D SL NN+ +++K Sbjct: 311 NLMILSGHPNIINIEGYYYWDLTST--MYIGLDLMDTSLAIYLTKNNISESLK 361
>DSBD_PANCI (Q9XDB2) Thiol:disulfide interchange protein dsbD precursor (EC| 1.8.1.8) (Protein-disulfide reductase) (Disulfide reductase) Length = 578 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +3 Query: 171 QEIQPQGSLHRQKPGMTVSGDYIQCCSTSSCLSPQTKHV 287 Q++Q +L PG T+ Y C + C P+T+ V Sbjct: 101 QDVQIPVTLKSTLPGATLKISYQGCAAAGFCYPPETREV 139
>UBCD4_DROME (P52486) Ubiquitin-conjugating enzyme E2-22 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 199 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -2 Query: 242 LNIVTRNSHPRLLSMEGSLWLDFLSTHW 159 + +TR HP + S+ G++ LD L +W Sbjct: 73 VRFITRIWHPNISSVTGAICLDILKDNW 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,695,521 Number of Sequences: 219361 Number of extensions: 854934 Number of successful extensions: 2503 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2502 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)