ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190255.1| Oryza sativa (japonica cultivar-group), predic... 232 1e-57
2dbj|AK099166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
3dbj|AK067698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
4dbj|AK058611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5gb|AY105003.1| Zea mays PCO095419 mRNA sequence 204 2e-49
6gb|M73744.1|PEAIM30 Pisum sativum IM30 protein mRNA, complete cds 131 3e-27
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
8dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
9dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
10ref|NM_105199.1| Arabidopsis thaliana unknown protein AT1G65260 ... 70 9e-09
11gb|AY117153.1| Arabidopsis thaliana unknown protein (At1g65260) ... 70 9e-09
12gb|AY045845.1| Arabidopsis thaliana unknown protein (At1g65260) ... 70 9e-09
13emb|BX815857.1|CNS0ABQQ Arabidopsis thaliana Full-length cDNA Co... 70 9e-09
14gb|AY089093.1| Arabidopsis thaliana clone 32284 mRNA, complete s... 70 9e-09
15gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete se... 60 9e-06
16gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 se... 56 1e-04
17emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chrom... 44 0.51
18gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 42 2.0
19gb|AC126694.4| Mus musculus BAC clone RP23-310G20 from 17, compl... 42 2.0
20ref|XM_511442.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 8.0
21gb|AE009246.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 8.0
22gb|AE008367.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 8.0
23gb|AF036704.1| Caenorhabditis elegans cosmid ZK185, complete seq... 40 8.0
24emb|CR376803.19| Zebrafish DNA sequence from clone DKEY-222P3 in... 40 8.0
25emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in ... 40 8.0
26emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in l... 40 8.0
27emb|CR391990.8| Zebrafish DNA sequence from clone DKEY-261M5 in ... 40 8.0
28ref|XM_859237.1| PREDICTED: Canis familiaris similar to CG2843-P... 40 8.0
29ref|XM_859216.1| PREDICTED: Canis familiaris similar to CG2843-P... 40 8.0
30ref|XM_537657.2| PREDICTED: Canis familiaris similar to CG2843-P... 40 8.0
31emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chrom... 40 8.0
32gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, compl... 40 8.0
33emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in... 40 8.0
34emb|AL391646.12| Human DNA sequence from clone RP11-697G4 on chr... 40 8.0
35gb|AC142233.3| Homo sapiens fosmid clone XXFOS-85707D3 from 7, c... 40 8.0
36emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in li... 40 8.0
37emb|BX062998.1|CNS09KRU Single read from an extremity of a full-... 40 8.0
38emb|BX030936.1|CNS08W18 Single read from an extremity of a full-... 40 8.0
39emb|BX045125.1|CNS096ZD Single read from an extremity of a full-... 40 8.0
40emb|BX025315.1|CNS08RP3 Single read from an extremity of a full-... 40 8.0
41emb|BX017809.1|CNS08LWL Single read from an extremity of a full-... 40 8.0
42emb|BX012065.1|CNS08HH1 Single read from an extremity of a full-... 40 8.0
43gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, com... 40 8.0
44emb|BX276184.16| Zebrafish DNA sequence from clone CH211-236E20 ... 40 8.0
45emb|CR457442.11| Zebrafish DNA sequence from clone CH211-228G24 ... 40 8.0
46emb|CR352253.9| Zebrafish DNA sequence from clone CH211-267D1 in... 40 8.0
47emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in ... 40 8.0
48emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in l... 40 8.0
49emb|BX842687.13| Zebrafish DNA sequence from clone DKEY-97L11 in... 40 8.0
50emb|BX005051.16| Zebrafish DNA sequence from clone CH211-158C6, ... 40 8.0
51emb|BX546503.14| Zebrafish DNA sequence from clone DKEY-157E10 i... 40 8.0
52dbj|AB168197.1| Macaca fascicularis testis cDNA clone: QtsA-1045... 40 8.0
53emb|BX470066.7| Zebrafish DNA sequence from clone RP71-10D23 in ... 40 8.0
54emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 i... 40 8.0
55gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 8.0
56gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D... 40 8.0
57gb|AY878388.1| Panagrolaimus detritophagus 18S ribosomal RNA gen... 40 8.0
58gb|AY918130.1| Sus scrofa clone KVL11 microsatellite sequence 40 8.0
59dbj|AK017849.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 8.0
60gb|AC090526.3|AC090526 Homo sapiens chromosome 15 clone RP11-208... 40 8.0
61gb|AC019221.4| Homo sapiens BAC clone RP11-534J17 from 2, comple... 40 8.0
62gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, comple... 40 8.0
63ref|XM_220212.3| PREDICTED: Rattus norvegicus similar to NOD3 (p... 40 8.0
64emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 i... 40 8.0
65dbj|AK000298.1| Homo sapiens cDNA FLJ20291 fis, clone HEP04788 40 8.0
66gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.5... 40 8.0
67emb|BX571878.20| Zebrafish DNA sequence from clone DKEY-265E7 in... 40 8.0
68emb|BX957228.13| Zebrafish DNA sequence from clone CH211-230K8 i... 40 8.0
69gb|BC008833.2| Homo sapiens coiled-coil domain containing 49, mR... 40 8.0
70gb|BC003085.1| Homo sapiens coiled-coil domain containing 49, mR... 40 8.0
71emb|CR846100.11| Zebrafish DNA sequence from clone DKEYP-94B4, c... 40 8.0
72ref|NM_017748.3| Homo sapiens coiled-coil domain containing 49 (... 40 8.0
73emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, ... 40 8.0
74gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome... 40 8.0 
>ref|NM_190255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  232 bits (117), Expect = 1e-57
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 327 gttctacccggaggaagctcgcctttcaaagagctcccggacagttcttttctcatttgt 386
           |||||||| |||||||| || |||||| ||||||| || || | ||| ||| ||||||||
Sbjct: 860 gttctacctggaggaagttctcctttcgaagagcttccagaaatttcctttttcatttgt 801

                                                                       
Query: 387 gcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatcg 446
           ||||| ||||| ||||||||||  |||||||||| ||||||||||||||| |||||||| 
Sbjct: 800 gcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaactttccttcaagatcatca 741

                                                                       
Query: 447 gctcccaattgaccaagtgcctcagcttgggattccatagtcataactttctcctccatc 506
           | | |||| ||||| |||||||| |||||||| ||||| | ||||||||| |||||||| 
Sbjct: 740 gttgccaactgaccgagtgcctctgcttgggactccattgccataactttttcctccatt 681

                                                                       
Query: 507 ttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcactttt 566
           |||||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 680 ttctcaaatgctgaaagagcaccactagtatttacattccccagcatttcgctcactttt 621

                                
Query: 567 gttgcggtctttgctgattga 587
           ||||  ||||| |||||||||
Sbjct: 620 gttgaagtcttggctgattga 600



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 236 ctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtcccg 295
           |||||| || |||| |||||| |||||||||||||||||  ||||||||||  |||| ||
Sbjct: 954 ctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtctcg 895

                   
Query: 296 gaaagggc 303
           ||||||||
Sbjct: 894 gaaagggc 887
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>dbj|AK099166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081J06, full
           insert sequence
          Length = 1306

 Score =  232 bits (117), Expect = 1e-57
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 327 gttctacccggaggaagctcgcctttcaaagagctcccggacagttcttttctcatttgt 386
           |||||||| |||||||| || |||||| ||||||| || || | ||| ||| ||||||||
Sbjct: 921 gttctacctggaggaagttctcctttcgaagagcttccagaaatttcctttttcatttgt 862

                                                                       
Query: 387 gcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatcg 446
           ||||| ||||| ||||||||||  |||||||||| ||||||||||||||| |||||||| 
Sbjct: 861 gcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaactttccttcaagatcatca 802

                                                                       
Query: 447 gctcccaattgaccaagtgcctcagcttgggattccatagtcataactttctcctccatc 506
           | | |||| ||||| |||||||| |||||||| ||||| | ||||||||| |||||||| 
Sbjct: 801 gttgccaactgaccgagtgcctctgcttgggactccattgccataactttttcctccatt 742

                                                                       
Query: 507 ttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcactttt 566
           |||||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 741 ttctcaaatgctgaaagagcaccactagtatttacattccccagcatttcgctcactttt 682

                                
Query: 567 gttgcggtctttgctgattga 587
           ||||  ||||| |||||||||
Sbjct: 681 gttgaagtcttggctgattga 661



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 233  aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
            ||||||||| || |||| |||| | |||||||||||||||||  ||||||||||  ||||
Sbjct: 1018 aatctaatattcattggccttcctccgcagctcatttagctcattctcaatctcgatgtc 959

                       
Query: 293  ccggaaagggc 303
             ||||||||||
Sbjct: 958  tcggaaagggc 948
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>dbj|AK067698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L10, full
           insert sequence
          Length = 1309

 Score =  232 bits (117), Expect = 1e-57
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 327 gttctacccggaggaagctcgcctttcaaagagctcccggacagttcttttctcatttgt 386
           |||||||| |||||||| || |||||| ||||||| || || | ||| ||| ||||||||
Sbjct: 924 gttctacctggaggaagttctcctttcgaagagcttccagaaatttcctttttcatttgt 865

                                                                       
Query: 387 gcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatcg 446
           ||||| ||||| ||||||||||  |||||||||| ||||||||||||||| |||||||| 
Sbjct: 864 gcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaactttccttcaagatcatca 805

                                                                       
Query: 447 gctcccaattgaccaagtgcctcagcttgggattccatagtcataactttctcctccatc 506
           | | |||| ||||| |||||||| |||||||| ||||| | ||||||||| |||||||| 
Sbjct: 804 gttgccaactgaccgagtgcctctgcttgggactccattgccataactttttcctccatt 745

                                                                       
Query: 507 ttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcactttt 566
           |||||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 744 ttctcaaatgctgaaagagcaccactagtatttacattccccagcatttcgctcactttt 685

                                
Query: 567 gttgcggtctttgctgattga 587
           ||||  ||||| |||||||||
Sbjct: 684 gttgaagtcttggctgattga 664



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 233  aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
            ||||||||| || |||| |||||| |||||||||||||||||  ||||||||||  ||||
Sbjct: 1021 aatctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtc 962

                       
Query: 293  ccggaaagggc 303
             ||||||||||
Sbjct: 961  tcggaaagggc 951
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>dbj|AK058611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A10, full
           insert sequence
          Length = 1357

 Score =  232 bits (117), Expect = 1e-57
 Identities = 225/261 (86%)
 Strand = Plus / Minus

                                                                       
Query: 327 gttctacccggaggaagctcgcctttcaaagagctcccggacagttcttttctcatttgt 386
           |||||||| |||||||| || |||||| ||||||| || || | ||| ||| ||||||||
Sbjct: 992 gttctacctggaggaagttctcctttcgaagagcttccagaaatttcctttttcatttgt 933

                                                                       
Query: 387 gcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatcg 446
           ||||| ||||| ||||||||||  |||||||||| ||||||||||||||| |||||||| 
Sbjct: 932 gcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaactttccttcaagatcatca 873

                                                                       
Query: 447 gctcccaattgaccaagtgcctcagcttgggattccatagtcataactttctcctccatc 506
           | | |||| ||||| |||||||| |||||||| ||||| | ||||||||| |||||||| 
Sbjct: 872 gttgccaactgaccgagtgcctctgcttgggactccattgccataactttttcctccatt 813

                                                                       
Query: 507 ttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcactttt 566
           |||||||| ||||| || |||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 812 ttctcaaatgctgaaagagcaccactagtatttacattccccagcatttcgctcactttt 753

                                
Query: 567 gttgcggtctttgctgattga 587
           ||||  ||||| |||||||||
Sbjct: 752 gttgaagtcttggctgattga 732



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 233  aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
            ||||||||| || |||| |||||| |||||||||||||||||  ||||||||||  ||||
Sbjct: 1089 aatctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtc 1030

                       
Query: 293  ccggaaagggc 303
             ||||||||||
Sbjct: 1029 tcggaaagggc 1019
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>gb|AY105003.1| Zea mays PCO095419 mRNA sequence
          Length = 1460

 Score =  204 bits (103), Expect = 2e-49
 Identities = 224/263 (85%), Gaps = 1/263 (0%)
 Strand = Plus / Minus

                                                                        
Query: 326  tgttctacccggaggaagctcgcctttcaaagagctcccggacagttcttttctcatttg 385
            |||||| || ||||||||||| |||||||||||||| || |||| ||| ||| ||| |||
Sbjct: 1061 tgttctgcctggaggaagctctcctttcaaagagcttccagacaattcctttttcagttg 1002

                                                                        
Query: 386  tgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatc 445
            || ||||||||| ||||| ||||  |||||||||| ||||||||||||||||| ||||||
Sbjct: 1001 tgaaagatcatcatcaacagatgaagtctcaagcagtgcaaactttccttctaaatcatc 942

                                                                        
Query: 446  ggctcccaattgacca-agtgcctcagcttgggattccatagtcataactttctcctcca 504
             | | | || || ||  |||||||| |||||||||||||| | ||||||||| |||||||
Sbjct: 941  agttgctaactggcccgagtgcctctgcttgggattccatcgccataactttttcctcca 882

                                                                        
Query: 505  tcttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcactt 564
            | |||||||| || || ||||| | |||||||||||| || |||| ||||||||||||||
Sbjct: 881  ttttctcaaatgcagaaagggcgctacttgtattcacgttgcccaacatttcactcactt 822

                                   
Query: 565  ttgttgcggtctttgctgattga 587
            |||| || |||||||||||||||
Sbjct: 821  ttgtagcagtctttgctgattga 799
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>gb|M73744.1|PEAIM30 Pisum sativum IM30 protein mRNA, complete cds
          Length = 1449

 Score =  131 bits (66), Expect = 3e-27
 Identities = 168/202 (83%)
 Strand = Plus / Minus

                                                                       
Query: 386 tgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaactttccttctagatcatc 445
           |||||| ||||| ||||| ||||  |||||||||||||||||||| ||||| ||||| ||
Sbjct: 879 tgcaaggtcatcatcaactgatgaggtctcaagcattgcaaacttcccttcaagatcgtc 820

                                                                       
Query: 446 ggctcccaattgaccaagtgcctcagcttgggattccatagtcataactttctcctccat 505
            | |  ||| || || || || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 819 agttgtcaactggcccagagcttcagcttgggactccattgtcatcactttctcttccat 760

                                                                       
Query: 506 cttctcaaacgctgacagggcaccacttgtattcacattccccagcatttcactcacttt 565
            || ||||| ||||| || |||| ||||||||| ||||| |||||||| |||||||| ||
Sbjct: 759 tttttcaaaagctgaaagagcactacttgtattgacatttcccagcatctcactcacctt 700

                                 
Query: 566 tgttgcggtctttgctgattga 587
            ||||| |||||||| ||||||
Sbjct: 699 ggttgcagtctttgcagattga 678
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                            
Query: 493      ctttctcctccatcttctcaaacgctgacagggcaccacttgtattcacattccccagca 552
                |||| |||||||| |||||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct: 38905955 ctttttcctccattttctcaaatgctgaaagagcaccactagtatttacattccccagca 38906014

                                  
Query: 553      tttcactcacttttgttg 570
                |||| |||||||||||||
Sbjct: 38906015 tttcgctcacttttgttg 38906032



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 233      aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
                ||||||||| || |||| |||||| |||||||||||||||||  ||||||||||  ||||
Sbjct: 38904540 aatctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtc 38904599

                           
Query: 293      ccggaaagggc 303
                 ||||||||||
Sbjct: 38904600 tcggaaagggc 38904610



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 379      tcatttgtgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaact 429
                ||||||||||||| ||||| ||||||||||  |||||||||| ||||||||
Sbjct: 38904966 tcatttgtgcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaact 38905016
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                          
Query: 493    ctttctcctccatcttctcaaacgctgacagggcaccacttgtattcacattccccagca 552
              |||| |||||||| |||||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct: 178837 ctttttcctccattttctcaaatgctgaaagagcaccactagtatttacattccccagca 178896

                                
Query: 553    tttcactcacttttgttg 570
              |||| |||||||||||||
Sbjct: 178897 tttcgctcacttttgttg 178914



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 233    aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
              ||||||||| || |||| |||||| |||||||||||||||||  ||||||||||  ||||
Sbjct: 177422 aatctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtc 177481

                         
Query: 293    ccggaaagggc 303
               ||||||||||
Sbjct: 177482 tcggaaagggc 177492



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 379    tcatttgtgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaact 429
              ||||||||||||| ||||| ||||||||||  |||||||||| ||||||||
Sbjct: 177848 tcatttgtgcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaact 177898
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696G06
          Length = 142571

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                         
Query: 493   ctttctcctccatcttctcaaacgctgacagggcaccacttgtattcacattccccagca 552
             |||| |||||||| |||||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct: 70741 ctttttcctccattttctcaaatgctgaaagagcaccactagtatttacattccccagca 70800

                               
Query: 553   tttcactcacttttgttg 570
             |||| |||||||||||||
Sbjct: 70801 tttcgctcacttttgttg 70818



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 233   aatctaatactctttggtcttctttcgcagctcatttagctccgtctcaatctctgtgtc 292
             ||||||||| || |||| |||||| |||||||||||||||||  ||||||||||  ||||
Sbjct: 69326 aatctaatattcattggccttcttccgcagctcatttagctcattctcaatctcgatgtc 69385

                        
Query: 293   ccggaaagggc 303
              ||||||||||
Sbjct: 69386 tcggaaagggc 69396



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 379   tcatttgtgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaact 429
             ||||||||||||| ||||| ||||||||||  |||||||||| ||||||||
Sbjct: 69752 tcatttgtgcaaggtcatcatcaaccgatgaagtctcaagcaatgcaaact 69802
to top
>ref|NM_105199.1| Arabidopsis thaliana unknown protein AT1G65260 mRNA, complete cds
          Length = 1293

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 480 tccatagtcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
           ||||||| |||||||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 818 tccatagccataactttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 760
to top
>gb|AY117153.1| Arabidopsis thaliana unknown protein (At1g65260) mRNA, complete cds
          Length = 1024

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 480 tccatagtcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
           ||||||| |||||||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 749 tccatagccataactttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 691
to top
>gb|AY045845.1| Arabidopsis thaliana unknown protein (At1g65260) mRNA, complete cds
          Length = 1202

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 480 tccatagtcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
           ||||||| |||||||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 758 tccatagccataactttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 700
to top
>emb|BX815857.1|CNS0ABQQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH13ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1226

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 480 tccatagtcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
           ||||||| |||||||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 782 tccatagccataactttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 724
to top
>gb|AY089093.1| Arabidopsis thaliana clone 32284 mRNA, complete sequence
          Length = 1292

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 480 tccatagtcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
           ||||||| |||||||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 818 tccatagccataactttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 760
to top
>gb|AC137825.26| Medicago truncatula clone mth2-23j1, complete sequence
          Length = 130938

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                         
Query: 493   ctttctcctccatcttctcaaacgctgacagggcaccacttgtattcacattccccagca 552
             ||||||| ||||| || ||||| || || ||||| ||||||||||| ||||| |||||||
Sbjct: 88761 ctttctcttccattttttcaaaagcggaaagggcgccacttgtattgacatttcccagca 88820

                       
Query: 553   tttcactcac 562
             | ||||||||
Sbjct: 88821 tctcactcac 88830



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 386   tgcaagatcatcgtcaaccgatgttgtctcaagcattgcaaact 429
             |||||| ||||| ||||| ||||   ||||||||||||||||||
Sbjct: 87459 tgcaaggtcatcatcaacggatgagctctcaagcattgcaaact 87502
to top
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete
            sequence
          Length = 88292

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 487  tcataactttctcctccatcttctcaaacgctgacagggcaccacttgtatt 538
            ||||| ||||||||||||| |||||||| ||||| || ||||| ||||||||
Sbjct: 5121 tcatacctttctcctccattttctcaaaagctgaaagagcaccgcttgtatt 5070
to top
>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete
              sequence
          Length = 203805

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 48     aatgtcattcacaggaaaattg 69
              ||||||||||||||||||||||
Sbjct: 125923 aatgtcattcacaggaaaattg 125902
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 326     tgttctacccggaggaagctc 346
               |||||||||||||||||||||
Sbjct: 2766489 tgttctacccggaggaagctc 2766469
to top
>gb|AC126694.4| Mus musculus BAC clone RP23-310G20 from 17, complete sequence
          Length = 232041

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 494   tttctcctccatcttctcaaa 514
             |||||||||||||||||||||
Sbjct: 40628 tttctcctccatcttctcaaa 40608
to top
>ref|XM_511442.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ20291
           (LOC454617), mRNA
          Length = 1436

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 466 ttctcctccatcttctcaaa 447
to top
>gb|AE009246.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 16 of
            187 of the complete sequence
          Length = 11249

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 293  ccggaaagggctgccg-gatttgctggc 319
            |||||||||||||||| |||||||||||
Sbjct: 7344 ccggaaagggctgccgcgatttgctggc 7371
to top
>gb|AE008367.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 171 of
            187 of the complete sequence
          Length = 10118

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 293  ccggaaagggctgccg-gatttgctggc 319
            |||||||||||||||| |||||||||||
Sbjct: 3907 ccggaaagggctgccgcgatttgctggc 3880
to top
>gb|AF036704.1| Caenorhabditis elegans cosmid ZK185, complete sequence
          Length = 29363

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 552  atttcactcacttttgttgc 571
            ||||||||||||||||||||
Sbjct: 2443 atttcactcacttttgttgc 2462
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>emb|CR376803.19| Zebrafish DNA sequence from clone DKEY-222P3 in linkage group 22,
             complete sequence
          Length = 108133

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 56869 aagtacaatgtcattcacag 56888
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>emb|CR769784.10| Zebrafish DNA sequence from clone DKEY-3N10 in linkage group 1,
             complete sequence
          Length = 230420

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 20847 aagtacaatgtcattcacag 20828
to top
>emb|BX927253.9| Zebrafish DNA sequence from clone DKEY-29J8 in linkage group 21, complete
              sequence
          Length = 204347

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 185746 aagtacaatgtcattcacag 185765
to top
>emb|CR391990.8| Zebrafish DNA sequence from clone DKEY-261M5 in linkage group 14,
             complete sequence
          Length = 165493

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 97922 aagtacaatgtcattcacag 97903
to top
>ref|XM_859237.1| PREDICTED: Canis familiaris similar to CG2843-PA, transcript
           variant 3 (LOC480536), mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 428 ttctcctccatcttctcaaa 409
to top
>ref|XM_859216.1| PREDICTED: Canis familiaris similar to CG2843-PA, transcript
           variant 2 (LOC480536), mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 428 ttctcctccatcttctcaaa 409
to top
>ref|XM_537657.2| PREDICTED: Canis familiaris similar to CG2843-PA, transcript
           variant 1 (LOC480536), mRNA
          Length = 1537

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 428 ttctcctccatcttctcaaa 409
to top
>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete
              sequence
          Length = 186091

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 543    ttccccagcatttcactcac 562
              ||||||||||||||||||||
Sbjct: 152786 ttccccagcatttcactcac 152805
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>gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, complete sequence
          Length = 218747

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ataactttctcctccatctt 508
             ||||||||||||||||||||
Sbjct: 50077 ataactttctcctccatctt 50058
to top
>emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in linkage group 14,
             complete sequence
          Length = 167652

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 37860 aagtacaatgtcattcacag 37879
to top
>emb|AL391646.12| Human DNA sequence from clone RP11-697G4 on chromosome 6 Contains the
             5' end of the FOXO3A gene for forkhead box O3A, part of a
             novel gene and a pseudogene similar to SMT3, complete
             sequence
          Length = 72254

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 499   cctccatcttctcaaacgctgacagggc 526
             ||||||||||||||| | ||||||||||
Sbjct: 22628 cctccatcttctcaagccctgacagggc 22601
to top
>gb|AC142233.3| Homo sapiens fosmid clone XXFOS-85707D3 from 7, complete sequence
          Length = 29639

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aaattaactgtacaaagtac 47
             ||||||||||||||||||||
Sbjct: 16158 aaattaactgtacaaagtac 16139
to top
>emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in linkage group 5,
            complete sequence
          Length = 266753

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   aagtacaatgtcattcacag 61
            ||||||||||||||||||||
Sbjct: 5346 aagtacaatgtcattcacag 5365
to top
>emb|BX062998.1|CNS09KRU Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAC44CC09 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 824

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 39 gacaaaattaactgtacaaa 20
to top
>emb|BX030936.1|CNS08W18 Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAA46AG02 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 986

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 21 gacaaaattaactgtacaaa 2
to top
>emb|BX045125.1|CNS096ZD Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAC19AE07 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 896

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 22 gacaaaattaactgtacaaa 3
to top
>emb|BX025315.1|CNS08RP3 Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAA38DC05 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 893

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 32 gacaaaattaactgtacaaa 13
to top
>emb|BX017809.1|CNS08LWL Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAA26DG05 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 912

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 22 gacaaaattaactgtacaaa 3
to top
>emb|BX012065.1|CNS08HH1 Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAA19AH10 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 858

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 24 gacaaaattaactgtacaaa 43
          ||||||||||||||||||||
Sbjct: 29 gacaaaattaactgtacaaa 10
to top
>gb|AC027451.11| Homo sapiens chromosome 8, clone RP11-696P8, complete sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atactctttggtcttctttc 258
              ||||||||||||||||||||
Sbjct: 135403 atactctttggtcttctttc 135384
to top
>emb|BX276184.16| Zebrafish DNA sequence from clone CH211-236E20 in linkage group 17,
             complete sequence
          Length = 161442

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 73393 aagtacaatgtcattcacag 73412
to top
>emb|CR457442.11| Zebrafish DNA sequence from clone CH211-228G24 in linkage group 14,
             complete sequence
          Length = 132912

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 71729 aagtacaatgtcattcacag 71710
to top
>emb|CR352253.9| Zebrafish DNA sequence from clone CH211-267D1 in linkage group 13,
              complete sequence
          Length = 160748

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 125923 aagtacaatgtcattcacag 125942
to top
>emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in linkage group 4 Contains
             the gene for a novel protein similar to vertebrate pim-1
             oncogene (PIM1) and two CpG islands, complete sequence
          Length = 146489

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 24089 aagtacaatgtcattcacag 24108
to top
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22,
             complete sequence
          Length = 183230

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 42405 aagtacaatgtcattcacag 42386
to top
>emb|BX842687.13| Zebrafish DNA sequence from clone DKEY-97L11 in linkage group 7,
             complete sequence
          Length = 218252

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 15260 aagtacaatgtcattcacag 15241
to top
>emb|BX005051.16| Zebrafish DNA sequence from clone CH211-158C6, complete sequence
          Length = 162147

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 108282 aagtacaatgtcattcacag 108263



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 91692 aagtacaatgtcattcacag 91673
to top
>emb|BX546503.14| Zebrafish DNA sequence from clone DKEY-157E10 in linkage group 22,
              complete sequence
          Length = 157572

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 135849 aagtacaatgtcattcacag 135868



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 86594 aagtacaatgtcattcacag 86613
to top
>dbj|AB168197.1| Macaca fascicularis testis cDNA clone: QtsA-10457, similar to human
           hypothetical protein FLJ20291 (FLJ20291), mRNA, RefSeq:
           NM_017748.3
          Length = 2398

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 429 ttctcctccatcttctcaaa 410
to top
>emb|BX470066.7| Zebrafish DNA sequence from clone RP71-10D23 in linkage group 5, complete
              sequence
          Length = 178499

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 102858 aagtacaatgtcattcacag 102877
to top
>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23,
             complete sequence
          Length = 189019

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 98244 aagtacaatgtcattcacag 98263
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     gctcccggacagttcttttc 378
               ||||||||||||||||||||
Sbjct: 1421931 gctcccggacagttcttttc 1421950
to top
>gb|AC023245.5|AC023245 Homo sapiens chromosome 8, clone RP11-25D10, complete sequence
          Length = 175205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   atactctttggtcttctttc 258
             ||||||||||||||||||||
Sbjct: 46216 atactctttggtcttctttc 46197
to top
>gb|AY878388.1| Panagrolaimus detritophagus 18S ribosomal RNA gene and internal
           transcribed spacer 1, partial sequence
          Length = 569

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 actttctcctccatcttctc 511
           ||||||||||||||||||||
Sbjct: 86  actttctcctccatcttctc 67
to top
>gb|AY918130.1| Sus scrofa clone KVL11 microsatellite sequence
          Length = 649

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 ttccatcaagcctggcgacacaga 216
           |||||||||||||||| |||||||
Sbjct: 155 ttccatcaagcctggcaacacaga 132
to top
>dbj|AK017849.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730562A04 product:RIKEN cDNA
           1300013D05 gene, full insert sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 tctcctccatcttctcaaac 515
           ||||||||||||||||||||
Sbjct: 423 tctcctccatcttctcaaac 404
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>gb|AC090526.3|AC090526 Homo sapiens chromosome 15 clone RP11-208K4 map 15q21.1, complete
             sequence
          Length = 168050

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gattccatagtcataacttt 496
             ||||||||||||||||||||
Sbjct: 28803 gattccatagtcataacttt 28784
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>gb|AC019221.4| Homo sapiens BAC clone RP11-534J17 from 2, complete sequence
          Length = 107611

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   tccatcttctcaaacgctga 520
             ||||||||||||||||||||
Sbjct: 98638 tccatcttctcaaacgctga 98619
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>gb|AC096558.1| Homo sapiens BAC clone RP11-186C15 from 2, complete sequence
          Length = 169453

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   tcacattccccagcatttca 557
             ||||||||||||||||||||
Sbjct: 39139 tcacattccccagcatttca 39120
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>ref|XM_220212.3| PREDICTED: Rattus norvegicus similar to NOD3 (predicted)
           (LOC287070), mRNA
          Length = 3462

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 ctccatcttctcaaacgctg 519
           ||||||||||||||||||||
Sbjct: 825 ctccatcttctcaaacgctg 844
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>emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 in linkage group 4,
              complete sequence
          Length = 184184

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 487    tcataactttctcctccatcttct 510
              |||||||||||||| |||||||||
Sbjct: 157484 tcataactttctccaccatcttct 157461
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>dbj|AK000298.1| Homo sapiens cDNA FLJ20291 fis, clone HEP04788
          Length = 2024

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 425 ttctcctccatcttctcaaa 406
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>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence
          Length = 286758

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 495    ttctcctccatcttctcaaa 514
              ||||||||||||||||||||
Sbjct: 259984 ttctcctccatcttctcaaa 260003
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>emb|BX571878.20| Zebrafish DNA sequence from clone DKEY-265E7 in linkage group 14,
              complete sequence
          Length = 177362

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 106946 aagtacaatgtcattcacag 106965
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>emb|BX957228.13| Zebrafish DNA sequence from clone CH211-230K8 in linkage group 24,
             complete sequence
          Length = 146378

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 60483 aagtacaatgtcattcacag 60502
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>gb|BC008833.2| Homo sapiens coiled-coil domain containing 49, mRNA (cDNA clone
           MGC:12612 IMAGE:4304656), complete cds
          Length = 2347

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 461 ttctcctccatcttctcaaa 442
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>gb|BC003085.1| Homo sapiens coiled-coil domain containing 49, mRNA (cDNA clone
           IMAGE:3358029), containing frame-shift errors
          Length = 587

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 328 ttctcctccatcttctcaaa 309
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>emb|CR846100.11| Zebrafish DNA sequence from clone DKEYP-94B4, complete sequence
          Length = 172492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     aagtacaatgtcattcacag 61
              ||||||||||||||||||||
Sbjct: 135611 aagtacaatgtcattcacag 135630
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>ref|NM_017748.3| Homo sapiens coiled-coil domain containing 49 (CCDC49), mRNA
          Length = 2347

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 495 ttctcctccatcttctcaaa 514
           ||||||||||||||||||||
Sbjct: 461 ttctcctccatcttctcaaa 442
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>emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, complete sequence
          Length = 174293

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagtacaatgtcattcacag 61
             ||||||||||||||||||||
Sbjct: 61641 aagtacaatgtcattcacag 61660
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>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence
          Length = 206555

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   actttctcctccatcttctc 511
             ||||||||||||||||||||
Sbjct: 28100 actttctcctccatcttctc 28119


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,458,717
Number of Sequences: 3902068
Number of extensions: 5458717
Number of successful extensions: 110008
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 109789
Number of HSP's gapped (non-prelim): 216
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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